>LOC_Os03g48110:12003.t04171:unspliced-genomic expressed protein|
Length = 4227
Score = 193 bits (416), Expect = 1e-48
Identities = 74/87 (85%), Positives = 80/87 (91%)
Frame = +3 / +1
Query: 114 MGFIMEFAENLILRLMEDPEQRDEAQRAHVYRMKERCERTKAAWALPLRPYGFWTFDHFN 293
MGF+MEFAENLILR+MEDP +RD AQR HVYRMKERCERTKAAW+LPLRPYGFWTFD FN
Sbjct: 94 MGFVMEFAENLILRMMEDPGKRDAAQREHVYRMKERCERTKAAWSLPLRPYGFWTFDRFN 273
Query: 294 SQLSWDPQISQAAGRRDPYDDLLARHA 374
SQLSWDPQIS A GRRDPYDD+L RH+
Sbjct: 274 SQLSWDPQISHAPGRRDPYDDVLHRHS 354
Score = 77.6 bits (163), Expect(2) = 4e-19
Identities = 33/37 (89%), Positives = 33/37 (89%)
Frame = -1 / -2
Query: 322 LIWGSQESWELKWSKVQKP*GRSGSAQAALVRSHRSF 212
LIWGSQESWELK SKVQKP*GRSG AALVRSHRSF
Sbjct: 302 LIWGSQESWELKRSKVQKP*GRSGRLHAALVRSHRSF 192
Score = 36.8 bits (74), Expect(2) = 4e-19
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -1
Query: 161 HQPQDQVLRELHDESH 114
H PQDQVLRELH E+H
Sbjct: 141 HHPQDQVLRELHHETH 94
>LOC_Os01g65200:12001.t05886:unspliced-genomic peptide transporter PTR2, putative, expressed|
Length = 2749
Score = 32.2 bits (64), Expect(2) = 0.41
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -1 / -3
Query: 628 FMEQDRKSADTKHFWYLAEQEVCRSNHIQHMNQLGQ 521
+ + K+ + WYL +E ++NH +H++Q Q
Sbjct: 2168 YAQVQSKAQTAQTIWYLVIEEFLQANHCEHISQTSQ 2061
Score = 24.4 bits (47), Expect(2) = 0.41
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 307 QESWELKWSKVQKP*GRSGSAQAALV 230
+E+ +WS + GR GSA A++V
Sbjct: 133 REAGRPRWSTAEAGGGRRGSAPASMV 56
>LOC_Os01g68230:12001.t06830:unspliced-genomic expressed protein|
Length = 3353
Score = 30.4 bits (60), Expect(2) = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 453 RRTHFLKMTVITFPSVSSILSLNCPSWFM 539
+ TH V PS+SS+ LN P+WFM
Sbjct: 591 QNTHVNGSKVQKTPSLSSLGHLNLPTWFM 677
Score = 22.1 bits (42), Expect(2) = 6.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 16 DGDGGRRHTH 45
+G+G RRH H
Sbjct: 211 EGEGARRHNH 240
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 174,874,353
Number of extensions: 2302772
Number of successful extensions: 9226
Number of sequences better than 10.0: 8
Length of query: 222
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 174
Effective length of database: 52,912,542
Effective search space: 9206782308
Effective search space used: 9206782308
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)