ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69g10 |
|---|---|
| Clone Library Name | barley_pub |
>P66718:RPOE_STRR6 Probable DNA-directed RNA polymerase delta subunit - Streptococcus| pneumoniae (strain ATCC BAA-255 / R6) Length = 200 Score = 39.7 bits (91), Expect = 0.027 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 EDAY D +D+N + + + + E+ E DD +DV +NED+ EF SDDD Sbjct: 139 EDAYEADPALSYDDENPDDEKNEVEAYDA-EINEIAPDDLGEDVDLNEDDDEF-SDDDAE 196 Query: 1141 GIEE 1152 EE Sbjct: 197 TSEE 200
>P66717:RPOE_STRPN Probable DNA-directed RNA polymerase delta subunit - Streptococcus| pneumoniae Length = 200 Score = 39.7 bits (91), Expect = 0.027 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 EDAY D +D+N + + + + E+ E DD +DV +NED+ EF SDDD Sbjct: 139 EDAYEADPALSYDDENPDDEKNEVEAYDA-EINEIAPDDLGEDVDLNEDDDEF-SDDDAE 196 Query: 1141 GIEE 1152 EE Sbjct: 197 TSEE 200
>P32657:CHD1_YEAST Chromo domain protein 1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1468 Score = 38.5 bits (88), Expect = 0.059 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +1 Query: 970 YVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVG 1143 Y +D +E ++DN + RR + +EF ++ +D +EDE +FE DDD G Sbjct: 32 YFNDSDDEDDEDNIKQSRRKRMTTIEDDEDEFEDEEGEEDSGEDEDEEDFEEDDDYYG 89
>Q5XA09:RPOE_STRP6 Probable DNA-directed RNA polymerase delta subunit - Streptococcus| pyogenes serotype M6 Length = 191 Score = 38.1 bits (87), Expect = 0.078 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Frame = +1 Query: 886 KRKK*SSSCYVLLGEDASTAQDWICEDAYVDDEMEETE-DDNAMEPRRSLRVRELHEVEE 1062 KRKK + +V EDA +D ED +E E E D+ + +S E+ E Sbjct: 105 KRKKKRVNAFVDGDEDAIDYRDDDPEDEDFTEESAEVEYDEEDPDDEKSEVESYDSELNE 164 Query: 1063 FVSDDEIDDVPINEDEIEFESDDDGV 1140 + +D+ ++V INE++ E E D++ V Sbjct: 165 IIPEDDFEEVDINEEDEEDEEDEEPV 190 Score = 31.2 bits (69), Expect = 9.5 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +1 Query: 913 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 1083 ++ LGE+ + W D ++ + ED++ + R+ RV + +E DD+ Sbjct: 70 FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFVDGDEDAIDYRDDDP 129 Query: 1084 DDVPINEDEIEFESDDD 1134 +D E+ E E D++ Sbjct: 130 EDEDFTEESAEVEYDEE 146
>P13816:GARP_PLAFF Glutamic acid-rich protein precursor - Plasmodium falciparum (isolate| FC27 / Papua New Guinea) Length = 678 Score = 37.4 bits (85), Expect = 0.13 Identities = 23/67 (34%), Positives = 32/67 (47%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 E+ D+E EE E++ E E E EE +DE D+ EDE + E D+D Sbjct: 570 EEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDA 629 Query: 1141 GIEETND 1161 EE +D Sbjct: 630 --EEDDD 634 Score = 36.2 bits (82), Expect = 0.29 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 E+ ++E EE E++ E E E EE D E D+ EDE + E DDD Sbjct: 577 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEE 636 Query: 1141 GIEETNDN 1164 +E +D+ Sbjct: 637 DDDEEDDD 644 Score = 31.2 bits (69), Expect = 9.5 Identities = 23/79 (29%), Positives = 37/79 (46%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINED 1107 E++ Q+ E ++E+EE E++ E E E EE ++E +D ED Sbjct: 553 EESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDED-EED 611 Query: 1108 EIEFESDDDGVGIEETNDN 1164 E + E D+D EE D+ Sbjct: 612 EDDAEEDEDDA--EEDEDD 628
>P40161:YNU6_YEAST Uncharacterized protein YNL206C - Saccharomyces cerevisiae (Baker's| yeast) Length = 455 Score = 37.0 bits (84), Expect = 0.17 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSL-----RVRELHEVEEFVSDDEIDDV 1092 ED A+ ED DDE E+ + +A+ S + + + +EF E++D+ Sbjct: 379 EDGEEAE----EDDEEDDEEEDKKGQSALNRDNSFASINGQPEQELQYKEFKEPLELEDI 434 Query: 1093 PINEDEIEFESDDDGVGIE 1149 PI D + E D+DG G+E Sbjct: 435 PIEIDNDDDEDDEDGSGVE 453
>Q9VXG1:HANG_DROME Zinc finger protein hangover - Drosophila melanogaster (Fruit fly)| Length = 1913 Score = 36.6 bits (83), Expect = 0.23 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 14/95 (14%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHE------------VEEFVS 1071 +D+ +D ED + + E ED+ ++P L ++ H+ VEE +S Sbjct: 1664 DDSDDDEDGEGEDEDEEGDGGEGEDEEGVQPPAQLLPQQQHKTDLNLNQDDDDLVEEVIS 1723 Query: 1072 --DDEIDDVPINEDEIEFESDDDGVGIEETNDNGL 1170 DDE DD + D+ + + DD+ +EE GL Sbjct: 1724 SDDDEDDDGEVESDDDDEDDDDEEDDVEEPEPVGL 1758 Score = 31.6 bits (70), Expect = 7.3 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 13/78 (16%) Frame = +1 Query: 976 DDEMEETEDDNAMEPRR-SLRVRELHEVEEFV-------SDDEIDDVPINEDEIEFESDD 1131 DDE ++ E+D+ EP L VR L + + SDDE D V ED IE E D+ Sbjct: 1739 DDEDDDDEEDDVEEPEPVGLTVRPLMNGKSKMPPLIVASSDDEDDGVMPIEDIIEEEFDE 1798 Query: 1132 DG-----VGIEETNDNGL 1170 D IEE +++ L Sbjct: 1799 DADPDPEDAIEEVDEDDL 1816
>P0C1B0:FKBP4_EMENI FK506-binding protein 4 - Emericella nidulans (Aspergillus nidulans)| Length = 478 Score = 36.2 bits (82), Expect = 0.29 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +1 Query: 979 DEMEETEDDNAMEPRRSLR-VRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEET 1155 DE E +DD++ PR +LR +R ++E SDD+ +D ED+ E +S+DD EE Sbjct: 41 DEAPEFDDDSSRRPRATLRIIRAPPGLDEEDSDDDYED----EDDSEDDSEDD----EEV 92 Query: 1156 N 1158 N Sbjct: 93 N 93
>Q5ZMN0:AN32B_CHICK Acidic leucine-rich nuclear phosphoprotein 32 family member B -| Gallus gallus (Chicken) Length = 262 Score = 36.2 bits (82), Expect = 0.29 Identities = 23/67 (34%), Positives = 37/67 (55%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 ED Y + E EE EDD+ E +++E V D+E D+ +D++E E ++DGV Sbjct: 168 EDEYENGEGEEEEDDD-----------EEDDLDEEVIDEEDDE----DDDLEGEEEEDGV 212 Query: 1141 GIEETND 1161 EE ++ Sbjct: 213 DDEEEDE 219
>Q9EST6:AN32B_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member B -| Rattus norvegicus (Rat) Length = 272 Score = 35.8 bits (81), Expect = 0.39 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINE 1104 GED +D E+ +DE +E ED++ V E EEF D E+D+ +E Sbjct: 187 GEDEEEEEDEDGEEEEDEDEEDEDEDEDVEGEDDEDEVSG--EEEEFGHDGEVDEDEEDE 244 Query: 1105 DEIEFESDDD-GVGIE---ETNDNG 1167 DE E E +++ G G + ET+D G Sbjct: 245 DEDEDEEEEESGKGEKRKRETDDEG 269
>Q9EST5:AN32B_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member B - Mus| musculus (Mouse) Length = 272 Score = 35.8 bits (81), Expect = 0.39 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINE 1104 GED +D E+ +DE +E ED++ V E EEF D E+D+ +E Sbjct: 187 GEDEEEEEDEDGEEEEDEDEEDEDEDEDVEGEDDEDEVSG--EEEEFGHDGEVDEDEEDE 244 Query: 1105 DEIEFESDDD-GVGIE---ETNDNG 1167 DE E E +++ G G + ET+D G Sbjct: 245 DEDEDEEEEESGKGEKRKRETDDEG 269
>Q3SZC6:AN32B_BOVIN Acidic leucine-rich nuclear phosphoprotein 32 family member B - Bos| taurus (Bovine) Length = 261 Score = 35.8 bits (81), Expect = 0.39 Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAM----EPRRSLRVRELHEVEEFVSDDEIDDV 1092 GED +D E+ DDE ++ ED++ E S E E DDE +D Sbjct: 174 GEDEDKEEDEDGEEEEFDDEEDDDEDEDVEGEEDEDEVSGEEEEFGHDGEVDEDDEDEDE 233 Query: 1093 PINEDEIEFESDDDGVGIEETNDNG 1167 +EDE E ES ET+D G Sbjct: 234 DEDEDEEEEESGKGEKRKRETDDEG 258
>Q6YSF3:AN321_ORYSJ Acidic leucine-rich nuclear phosphoprotein 32-related protein 1 -| Oryza sativa subsp. japonica (Rice) Length = 476 Score = 35.4 bits (80), Expect = 0.50 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDE----IEFESD 1128 ED YV++E ++ E+D E + E + E+ V E+ DVP + DE IE E + Sbjct: 254 EDEYVEEEDDDDEEDYEEEDDLGEEIDEDGDDEDAVV--EVHDVPSSSDEEEDGIEEEDE 311 Query: 1129 DDGVGIEETNDNG 1167 ++ EE D+G Sbjct: 312 EEDEDEEEVEDDG 324
>P25979:UBF1A_XENLA Nucleolar transcription factor 1-A - Xenopus laevis (African clawed| frog) Length = 677 Score = 34.7 bits (78), Expect = 0.86 Identities = 23/69 (33%), Positives = 36/69 (52%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 +D DD+ +E EDD+ E E + E SD++ +D NEDE E E D+D Sbjct: 593 DDDDEDDDDDEDEDDDDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDE-EGEEDEDEE 651 Query: 1141 GIEETNDNG 1167 ++ N++G Sbjct: 652 EDDDDNESG 660
>P19351:TNNT_DROME Troponin T, skeletal muscle - Drosophila melanogaster (Fruit fly)| Length = 397 Score = 34.7 bits (78), Expect = 0.86 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINED 1107 EDA +D + +D V++E+ E ED+ A E E E EE ++E ++ E+ Sbjct: 337 EDAKADEDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 396 Query: 1108 E 1110 E Sbjct: 397 E 397
>Q5BCN2:SPT5_EMENI Transcription elongation factor spt5 - Emericella nidulans| (Aspergillus nidulans) Length = 1016 Score = 34.7 bits (78), Expect = 0.86 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +1 Query: 976 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEET 1155 +DE E+ +DD+ +PR+ R+ H D E V EDE+E E +++G G+E+ Sbjct: 78 EDEEEDEDDDDVSKPRKR---RKGHGGLSAFIDYEAG-VDEEEDEVEDEEEEEGYGLEQH 133 Query: 1156 NDNGL 1170 D+ L Sbjct: 134 PDDVL 138
>Q6FRZ5:SPT5_CANGA Transcription elongation factor SPT5 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 1010 Score = 34.7 bits (78), Expect = 0.86 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 12/91 (13%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELH---EVEEFVSDDEIDDVP 1095 GE+ A+ + ED Y +++ +E EDD EP R +E + ++E VS+DE D+ Sbjct: 91 GEENQDAEG-LAED-YDEEDFDEDEDDEDEEPAAKRRQQERNRFLDIEAEVSEDEEDEED 148 Query: 1096 INEDEI---------EFESDDDGVGIEETND 1161 + E+ E E D++GV D Sbjct: 149 EEDSELVREGFITHGEDEDDEEGVAGNRRGD 179
>Q756G2:TOM1_ASHGO Probable E3 ubiquitin-protein ligase TOM1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 3258 Score = 34.3 bits (77), Expect = 1.1 Identities = 18/67 (26%), Positives = 37/67 (55%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 ED V+D + +D M +L + ++ +VE+ DDE + + ++++I F D+DG+ Sbjct: 1882 EDEDVEDVESDKDDVPDMFKNSALGMYDIEDVEDDHDDDENESLIGDDEDIAFVHDEDGL 1941 Query: 1141 GIEETND 1161 + + D Sbjct: 1942 EVVFSED 1948
>Q97EG9:RPOB_CLOAB DNA-directed RNA polymerase beta chain - Clostridium acetobutylicum| Length = 1241 Score = 34.3 bits (77), Expect = 1.1 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 6/69 (8%) Frame = +1 Query: 973 VDDEMEETE------DDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDD 1134 ++DE E+ + +D+ +EP R V+E E + E +DV I+ ++++ + + Sbjct: 1171 IEDETEDLDVNIEGNEDSKVEPIRPQDVQENVSGENVDAGYENEDVDIDYEDLDIDDLKN 1230 Query: 1135 GVGIEETND 1161 G+G+E+ ND Sbjct: 1231 GLGLEDFND 1239
>Q9U7C9:NUCMR_DICDI Nucleomorphin - Dictyostelium discoideum (Slime mold)| Length = 756 Score = 34.3 bits (77), Expect = 1.1 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDD 1134 E Y D+E +E ++D E E E EE D++++D +ED+ F+SD+D Sbjct: 533 EYKYDDEEEDEEDEDEEDEEEDEEEEEEEEEEEEDYDDEDLNDEESDEDD--FDSDED 588
>O35381:AN32A_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member A - Mus| musculus (Mouse) Length = 247 Score = 34.3 bits (77), Expect = 1.1 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 7/70 (10%) Frame = +1 Query: 964 DAYVDDEMEETEDD-------NAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFE 1122 + YV+D+ EE ED+ +E E E E+ ++E D+ N+ E++ E Sbjct: 161 EGYVEDDDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDE 220 Query: 1123 SDDDGVGIEE 1152 D++ G EE Sbjct: 221 EDEEEAGEEE 230
>P25977:UBF1_RAT Nucleolar transcription factor 1 - Rattus norvegicus (Rat)| Length = 764 Score = 33.9 bits (76), Expect = 1.5 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 ED DDE EE +D+N + + E S+DE +D NED+ + E DD+ Sbjct: 684 EDDDDDDEEEEEDDENGDSS------EDGGDSSESSSEDESEDGDENEDDDDDEDDDEDD 737 Query: 1141 GIEETNDN 1164 +E N++ Sbjct: 738 DEDEDNES 745
>P70475:MYT1L_RAT Myelin transcription factor 1-like protein - Rattus norvegicus (Rat)| Length = 1187 Score = 33.9 bits (76), Expect = 1.5 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +1 Query: 910 CYVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDD 1089 CY G + ++ ++ + +D E+ +DD+ E R + E+EE DDE D+ Sbjct: 90 CYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDRE----DEEEIEE--EDDEDDE 143 Query: 1090 VPINEDEIEFESDDDGVGIEETND 1161 + D++E E DDD EE + Sbjct: 144 DDDDGDDVEEEEDDDDEEEEEEEE 167 Score = 31.2 bits (69), Expect = 9.5 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 8/70 (11%) Frame = +1 Query: 979 DEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEF--------ESDDD 1134 DE E++ M+ + E E + DD+ +D EDE E E DDD Sbjct: 88 DECYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDREDEEEIEEEDDEDDEDDDD 147 Query: 1135 GVGIEETNDN 1164 G +EE D+ Sbjct: 148 GDDVEEEEDD 157
>P97500:MYT1L_MOUSE Myelin transcription factor 1-like protein - Mus musculus (Mouse)| Length = 1187 Score = 33.9 bits (76), Expect = 1.5 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +1 Query: 910 CYVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDD 1089 CY G + ++ ++ + +D E+ +DD+ E R + E+EE DDE DD Sbjct: 90 CYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDR----EDEEEIEE--EDDEDDD 143 Query: 1090 VPINEDEIEFESDDDGVGIEETND 1161 + D++E E +DD EE + Sbjct: 144 DDEDGDDVEEEEEDDDEEEEEEEE 167
>P36049:EBP2_YEAST rRNA-processing protein EBP2 - Saccharomyces cerevisiae (Baker's| yeast) Length = 427 Score = 33.9 bits (76), Expect = 1.5 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%) Frame = +1 Query: 811 KRRNKLDVRRRDDLVYVQFNGRMLDKR--KK*SSSCYVLLGEDASTAQDWIC--EDAYVD 978 K+ K DV++ ++ + L K+ +K + +DA+ AQ + ED D Sbjct: 53 KKEKKADVKKEVAADTEEYQSQALSKKEKRKLKKELKKMQEQDATEAQKHMSGDEDESGD 112 Query: 979 DEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEETN 1158 D EE E++ E R +L ++ + S+ E D +E E + E D+D V EE+ Sbjct: 113 DREEEEEEEEEEEGR-----LDLEKLAKSDSESEDD----SESENDSEEDEDVVAKEESE 163 Query: 1159 D 1161 + Sbjct: 164 E 164
>Q6A1I3:AN32B_SHEEP Acidic leucine-rich nuclear phosphoprotein 32 family member B - Ovis| aries (Sheep) Length = 261 Score = 33.9 bits (76), Expect = 1.5 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAM----EPRRSLRVRELHEVEEFVSDDEIDDV 1092 GE+ +D E+ DDE ++ ED++ E + S E E DDE +D Sbjct: 174 GENEDKEEDEDGEEEEFDDEEDDDEDEDVEGEEDEDKVSGEEEEFGHDGEADEDDEDEDE 233 Query: 1093 PINEDEIEFESDDDGVGIEETNDNG 1167 +EDE E ES ET+D G Sbjct: 234 DEDEDEEEEESGKGEGRKRETDDEG 258
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 33.5 bits (75), Expect = 1.9 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 3/122 (2%) Frame = +1 Query: 805 DAKRRNKLDVRRRDDLVYVQFNGRM---LDKRKK*SSSCYVLLGEDASTAQDWICEDAYV 975 DAK + L + ++ V N + L K K +SS Y+ D+++ E+ Sbjct: 129 DAKFQEFLSIHQKRTQVATWANDALEAKLPKAKTKASSDYLNFDSDSNSDSGQESEE--- 185 Query: 976 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEET 1155 + E+ E++ ++P+ +++ +EL +++ S +V +EDE E +S+D+ V EE Sbjct: 186 EPAREDPEEEQGLQPKAAVQ-KELSDMDYLKSKMVRAEVS-SEDEDEEDSEDEAVNCEEG 243 Query: 1156 ND 1161 ++ Sbjct: 244 SE 245
>A1CQA9:PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 - Aspergillus| clavatus Length = 1192 Score = 33.5 bits (75), Expect = 1.9 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 18/87 (20%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEME--ETEDDNAMEPR------------RSLRVRELHEVEE 1062 G+D + A D ED DD+M+ ETE++NA R +LR + +V + Sbjct: 350 GKDETVAADMGAEDE--DDDMQDGETEEENAAAARAAAERREERLQNEALRAQSSEKVPQ 407 Query: 1063 FVSDDEIDDVPINED----EIEFESDD 1131 D E++D PI + E++ E +D Sbjct: 408 TNGDVEMNDAPIQAEAENMEVDVEEED 434
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 33.5 bits (75), Expect = 1.9 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 12/70 (17%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAME------------PRRSLRVRELHEVEEFVSDDEIDDVPINE 1104 ED DDE EE EDD+ E P + + V+ EE D++ +D +E Sbjct: 198 EDDDDDDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDE 257 Query: 1105 DEIEFESDDD 1134 DE + E D+D Sbjct: 258 DEEDEEDDED 267
>P12839:NFM_RAT Neurofilament medium polypeptide - Rattus norvegicus (Rat)| Length = 846 Score = 33.5 bits (75), Expect = 1.9 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%) Frame = +1 Query: 955 ICEDAYVDDEMEETEDDNAM--EPRRSLRVRELHEVEEFVSDDEIDDVPIN------EDE 1110 I E+ V+DE E ED + E + E E EE + E++ P+ E+E Sbjct: 456 IIEETKVEDEKSEMEDALTVIAEELAASAKEEKEEAEEKEEEPEVEKSPVKSPEAKEEEE 515 Query: 1111 IEFESDDDGVGIEETNDNGL 1170 E E +++G EE D G+ Sbjct: 516 GEKEEEEEGQEEEEEEDEGV 535
>Q6C4C9:FKBP3_YARLI FK506-binding protein 3 - Yarrowia lipolytica (Candida lipolytica)| Length = 407 Score = 33.5 bits (75), Expect = 1.9 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRE--LHEVEEFVSDDEIDDVPINEDEIEFESDDD 1134 ED DDE +E ++ + ++ + E L EVE DDE DD +DE+EFE DD Sbjct: 75 EDEDDDDEDDEVSAEDMAQIKKLIAANEDGLDEVEG-GDDDEDDD---EDDEMEFEEDD- 129 Query: 1135 GVGIEETNDNG 1167 E+ +D G Sbjct: 130 ----EDDDDEG 136
>Q8NZF7:RPOE_STRP8 Probable DNA-directed RNA polymerase delta subunit - Streptococcus| pyogenes serotype M18 Length = 191 Score = 33.1 bits (74), Expect = 2.5 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +1 Query: 913 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 1083 ++ LGE+ + W D ++ + ED++ + R+ RV + +E DD+ Sbjct: 70 FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDP 129 Query: 1084 DDVPINEDEIEFESDDD 1134 +D E+ E E D+D Sbjct: 130 EDEDFTEESAEVEYDED 146
>Q0INC5:RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 - Oryza sativa subsp. japonica| (Rice) Length = 802 Score = 33.1 bits (74), Expect = 2.5 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINED 1107 ED S D + +DDE +E E+ + + E+ E+EE +++ D+V E+ Sbjct: 88 EDDSEEDDKEVVEGEIDDEEDEVEESEDDDEGVEVSDEEVEELEEGKGEEKSDEVEEGEE 147 Query: 1108 EIEFESDDDGVGIEE 1152 + E ++ G EE Sbjct: 148 GQDGEEEEKEEGDEE 162 Score = 32.3 bits (72), Expect = 4.3 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = +1 Query: 976 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEET 1155 D + E EDD+ +E + E ++ V + EIDD EDE+E ES+DD G+E + Sbjct: 75 DGDSEGDEDDSEVED-------DSEEDDKEVVEGEIDD---EEDEVE-ESEDDDEGVEVS 123 Query: 1156 ND 1161 ++ Sbjct: 124 DE 125
>P11928:OAS1A_MOUSE 2'-5'-oligoadenylate synthetase 1A - Mus musculus (Mouse)| Length = 367 Score = 33.1 bits (74), Expect = 2.5 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = -2 Query: 576 TFIEN*MHYQHLKIY---YHHLQIYNTSQYQHLFMKSIVHQIIKESKTVKNKKCAGNPEL 406 T +E ++YQHL+IY Y+ Q S+Y H ++ +I + GNPE Sbjct: 259 TVLELVINYQHLRIYWTKYYDFQHQEVSKYLHRQLRK-ARPVILDPADPTGNVAGGNPEG 317 Query: 405 H*RSTDGSRSNLWPACY 355 R + + LW C+ Sbjct: 318 WRRLAEEADVWLWYPCF 334
>P38996:NAB3_YEAST Nuclear polyadenylated RNA-binding protein 3 - Saccharomyces| cerevisiae (Baker's yeast) Length = 802 Score = 33.1 bits (74), Expect = 2.5 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +1 Query: 973 VDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEE 1152 V+DE EE +++ E + E E E DD NE+E E E DDD ++ Sbjct: 65 VNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDD 124 Query: 1153 TND 1161 +D Sbjct: 125 DDD 127
>P24827:IE68_PRVKA Immediate-early protein RSP40 - Pseudorabies virus (strain Kaplan)| (PRV) Length = 364 Score = 33.1 bits (74), Expect = 2.5 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = +1 Query: 925 GEDASTAQDW-----ICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDD 1089 G D + A ++ +CED D E E+ E+D E E E EE +D D Sbjct: 191 GSDTTVASEFSFRGSVCED---DGEDEDEEEDGEEEDEDEEGEEEEDEEEEEGDEDGETD 247 Query: 1090 VPINEDEIEFESDDD 1134 V +DE E E D++ Sbjct: 248 VYEEDDEAEDEEDEE 262
>Q92688:AN32B_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member B - Homo| sapiens (Human) Length = 251 Score = 33.1 bits (74), Expect = 2.5 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = +1 Query: 964 DAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEF-VSDDEIDDVPINEDEIEFESDDDGV 1140 DA VD EE ED+ + E E EEF DDE +DV +ED+ E +++ Sbjct: 159 DAEVDGVDEEEEDEEGEDEEDE--DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEF 216 Query: 1141 GIEETNDN 1164 G++E +++ Sbjct: 217 GLDEEDED 224 Score = 31.2 bits (69), Expect = 9.5 Identities = 27/81 (33%), Positives = 35/81 (43%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINE 1104 GED D E+ D+E +E ED E + E EEF D+E +D +E Sbjct: 174 GEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS----EEEEEFGLDEEDEDE--DE 227 Query: 1105 DEIEFESDDDGVGIEETNDNG 1167 DE E E ET+D G Sbjct: 228 DEEEEEGGKGEKRKRETDDEG 248
>Q5UP83:YL004_MIMIV Putative KilA-N domain-containing protein L4 - Mimivirus| Length = 454 Score = 32.7 bits (73), Expect = 3.3 Identities = 22/70 (31%), Positives = 36/70 (51%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 ++ Y +E +E DD + EL + SD+EI + +++EI ESD+D V Sbjct: 95 DNEYTTEESDEESDDESDGETNEESDEELDNKSDGESDEEISEE--SDEEISEESDED-V 151 Query: 1141 GIEETNDNGL 1170 EE +DN + Sbjct: 152 PEEEYDDNDI 161
>P17480:UBF1_HUMAN Nucleolar transcription factor 1 - Homo sapiens (Human)| Length = 764 Score = 32.7 bits (73), Expect = 3.3 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +1 Query: 976 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEET 1155 +DE +E ED+ + + + E S+DE +D NE++ E E DD+ +E Sbjct: 683 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDED 742 Query: 1156 NDN 1164 N++ Sbjct: 743 NES 745
>O74201:UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 - Candida albicans (Yeast)| Length = 179 Score = 32.7 bits (73), Expect = 3.3 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 997 EDDNAMEPRRSLRVRELHEVEE--FVSDDEIDDVPINEDEIEFESDDDGVGIEE 1152 E N + RSL V+ + E E + DD+ ++ +EDE E E DDD I+E Sbjct: 125 EAANLYKDHRSLYVKRVRETVENSWNDDDDEEEEEEDEDEAEDEDDDDDDNIDE 178
>P27692:SPT5_YEAST Transcription elongation factor SPT5 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1063 Score = 32.3 bits (72), Expect = 4.3 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +1 Query: 976 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDG 1137 DD+ +E +DD A RR ++E VSDDE +D EDE + E +G Sbjct: 157 DDDDDEDDDDEAPTKRRRQERNRFLDIEAEVSDDEDED----EDEEDSELVREG 206
>O13936:SPT5_SCHPO Transcription elongation factor spt5 - Schizosaccharomyces pombe| (Fission yeast) Length = 990 Score = 32.3 bits (72), Expect = 4.3 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINED 1107 E+ + A + ED D+E EE ED++ R+ R H+ D E + ++ED Sbjct: 104 EEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRAR----HDRRNQFLDIEAE---VDED 156 Query: 1108 EIEFESDDDGVGIEE 1152 E E E ++D +G E+ Sbjct: 157 EEELEDEEDEIGRED 171
>Q4HVS2:GNT1_GIBZE Glucose N-acetyltransferase 1 - Gibberella zeae (Fusarium| graminearum) Length = 431 Score = 32.3 bits (72), Expect = 4.3 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%) Frame = +1 Query: 931 DASTAQDWICEDAYVD--DEMEE--TEDDNAMEPRRSLRVRELHEVEE------FVSDDE 1080 D ++W DA VD DE+ E T D ++ L + E+ ++E F +DE Sbjct: 40 DVPVPEEWRNHDAVVDEVDEITETLTHDPDSRPTPHKLTIAEIEDLENKGEFMGFEDEDE 99 Query: 1081 IDDVPINEDEIEFESDD 1131 ID +D+ ++E DD Sbjct: 100 IDVFINLDDDGDWEEDD 116
>A5DY34:DRS1_LODEL ATP-dependent RNA helicase DRS1 - Lodderomyces elongisporus (Yeast)| (Saccharomyces elongisporus) Length = 686 Score = 32.3 bits (72), Expect = 4.3 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Frame = +1 Query: 979 DEMEETEDDNAMEPRRSLRVREL-----HEVEEFVSDDEIDDVPINEDEIEFESDDDGVG 1143 D++ E +D EP + + + E+ ++ DDE DD +ED E E DD+ Sbjct: 85 DDLNEIKDWEVEEPAKDIDLNEIIKKKRESKKDGNGDDEEDDGDEDEDASESEEDDEKEE 144 Query: 1144 IEETNDNG 1167 ++ NG Sbjct: 145 LKAAGKNG 152
>P49911:AN32A_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member A -| Rattus norvegicus (Rat) Length = 247 Score = 32.3 bits (72), Expect = 4.3 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = +1 Query: 964 DAYVDDEMEETEDD-------NAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFE 1122 + YV+D+ EE ED+ +E E E E+ ++E D+ N+ E++ E Sbjct: 161 EGYVEDDDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDE 220 Query: 1123 SDDDGVGIEE 1152 D++ EE Sbjct: 221 EDEEDAAEEE 230
>Q96DX7:TRI44_HUMAN Tripartite motif-containing protein 44 - Homo sapiens (Human)| Length = 344 Score = 32.0 bits (71), Expect = 5.6 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNA--MEPRRSLRVRELHEVEEFVSDDEIDDVPIN 1101 E++ + ++ E+ D+ EE+E+D+ ME + E ++ EE S+ E + + Sbjct: 103 EESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQ-EEGESEAEGETEAES 161 Query: 1102 EDEIEFESDDDGVGIEETNDNGL*LSTY 1185 E + E E + + V + D+GL LSTY Sbjct: 162 EFDPEIEMEAERVAKRKCPDHGLDLSTY 189
>Q4HYQ4:SPT6_GIBZE Transcription elongation factor SPT6 - Gibberella zeae (Fusarium| graminearum) Length = 1408 Score = 32.0 bits (71), Expect = 5.6 Identities = 23/76 (30%), Positives = 34/76 (44%) Frame = +1 Query: 934 ASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEI 1113 +++ +D I +A +DDE E+ D RR E EE DDE + + E I Sbjct: 2 SNSMRDLISGEAELDDEEEDESFDERGGQRRHKNAVEDSSEEEEDDDDEEEARKVREGFI 61 Query: 1114 EFESDDDGVGIEETND 1161 E +D+ G E D Sbjct: 62 VDEDEDEDEGGESDAD 77
>P20281:RS3_HALMA 30S ribosomal protein S3P - Haloarcula marismortui (Halobacterium| marismortui) Length = 304 Score = 32.0 bits (71), Expect = 5.6 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Frame = +1 Query: 922 LGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHE------VEEFVSDDEI 1083 L +D +D ED D + E E+ EP S EL E ++ +D+E Sbjct: 189 LPDDFEIYEDVDVEDYVADTDGESVEELLEGEPEDSETAEELDEDVAAGADDDSEADEEF 248 Query: 1084 DDVPINEDEIEFESDDD 1134 D I E+++E +DDD Sbjct: 249 VDEEIVEEDVEVPTDDD 265 Score = 31.2 bits (69), Expect = 9.5 Identities = 17/70 (24%), Positives = 37/70 (52%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINED 1107 +D S A + ++ V++++E DD+ + ++ E+EE V ++ +DV + Sbjct: 239 DDDSEADEEFVDEEIVEEDVEVPTDDDVEDV-------DVDELEEAVDEELDEDVEAEAE 291 Query: 1108 EIEFESDDDG 1137 E+ E D++G Sbjct: 292 ELMDEMDEEG 301
>P24096:KITH_BHV16 Thymidine kinase - Bovine herpesvirus 1 (strain 6660) (BoHV-1)| (Infectious bovine rhinotracheitis virus) Length = 357 Score = 32.0 bits (71), Expect = 5.6 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = -2 Query: 366 PACYWRTVW-----SGMVCCCMRCSRWRDGRVIDRQEGAPVHCCWRRKGESGGHGRVVVA 202 P YWRT++ SG++ RC+ G R+ GAP RR+G GG G V+ Sbjct: 46 PMAYWRTMFGTDALSGILAASARCAAASHGSARARRAGAP-----RRRGR-GGPGCVLPG 99 Query: 201 AAR 193 R Sbjct: 100 QVR 102
>P48988:CENPB_CRIGR Major centromere autoantigen B - Cricetulus griseus (Chinese hamster)| Length = 606 Score = 32.0 bits (71), Expect = 5.6 Identities = 21/58 (36%), Positives = 29/58 (50%) Frame = +1 Query: 979 DEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEE 1152 +E EE E++ E V E EVEE DE D+ E+E E ES +G+ E+ Sbjct: 426 EEEEEEEEEGEEEGGEGEEVGEEEEVEE--EGDESDEEEEEEEEEEEESSSEGLEAED 481
>Q8H0T4:UPL2_ARATH E3 ubiquitin-protein ligase UPL2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 3658 Score = 31.6 bits (70), Expect = 7.3 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +1 Query: 919 LLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPI 1098 + G D +D D Y DD ++E E+D E ++ V +DE D+ Sbjct: 2152 IAGTDVEDPEDTGLGDEYNDDMVDEDEED------------EDEYNDDMVDEDEDDEDEY 2199 Query: 1099 NEDEIEFESDD 1131 N+D ++ + DD Sbjct: 2200 NDDMVDEDEDD 2210
>Q9XZ71:TNNT_PERAM Troponin T - Periplaneta americana (American cockroach)| Length = 384 Score = 31.6 bits (70), Expect = 7.3 Identities = 20/70 (28%), Positives = 35/70 (50%) Frame = +1 Query: 925 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINE 1104 G+ S ++ + DA VDDE+EE + EP E EE +++E ++ E Sbjct: 325 GDPESPEEEEVKADAGVDDELEEPTFEPEPEP----------EPEEEAAEEEAEEEEEEE 374 Query: 1105 DEIEFESDDD 1134 +E E E +++ Sbjct: 375 EEEEEEEEEE 384
>O04235:SSRP1_VICFA FACT complex subunit SSRP1 - Vicia faba (Broad bean)| Length = 642 Score = 31.6 bits (70), Expect = 7.3 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = +1 Query: 991 ETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGVGIEETNDNG 1167 E +DD+A++P R+R +E SD+E D I++D+ +DD G + + + +G Sbjct: 456 ENDDDDAVDPHLE-RIRNEAGGDE--SDEEDSDFVIDKDDGGSPTDDSGADVSDASQSG 511
>P66720:RPOE_STRP3 Probable DNA-directed RNA polymerase delta subunit - Streptococcus| pyogenes serotype M3 Length = 191 Score = 31.6 bits (70), Expect = 7.3 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +1 Query: 913 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 1083 ++ LGE+ + W D ++ + ED++ + R+ RV + +E DD+ Sbjct: 70 FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDP 129 Query: 1084 DDVPINEDEIEFESDDD 1134 +D E+ E E D++ Sbjct: 130 EDEDFTEESAEVEYDEE 146
>P66719:RPOE_STRP1 Probable DNA-directed RNA polymerase delta subunit - Streptococcus| pyogenes serotype M1 Length = 191 Score = 31.6 bits (70), Expect = 7.3 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +1 Query: 913 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 1083 ++ LGE+ + W D ++ + ED++ + R+ RV + +E DD+ Sbjct: 70 FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDP 129 Query: 1084 DDVPINEDEIEFESDDD 1134 +D E+ E E D++ Sbjct: 130 EDEDFTEESAEVEYDEE 146
>P13084:NPM_RAT Nucleophosmin - Rattus norvegicus (Rat)| Length = 292 Score = 31.6 bits (70), Expect = 7.3 Identities = 23/67 (34%), Positives = 31/67 (46%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 EDA +DE EE M +RS ++ V DE DD +DE + + DDD Sbjct: 121 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDDEDDEDDEDDEDDDDDDF 180 Query: 1141 GIEETND 1161 EET + Sbjct: 181 DEEETEE 187
>Q6BSP7:CLF1_DEBHA Pre-mRNA-splicing factor CLF1 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 714 Score = 31.6 bits (70), Expect = 7.3 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = +1 Query: 964 DAYVDDEMEETEDDNAMEPR-RSLRVRELHEVEEFVSDDEIDDVPINEDEIE 1116 DAY++DE E DNA E R +++ E+ D E++DVPI+ ++++ Sbjct: 174 DAYINDEKRYDEYDNAREIYIRYVQIHSSGEIWLKWIDFEMNDVPIDPEQVK 225
>P30658:CBX2_MOUSE Chromobox protein homolog 2 - Mus musculus (Mouse)| Length = 519 Score = 31.2 bits (69), Expect = 9.5 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -3 Query: 413 LNYTKEARMEAGPTFGLLATG-GRCGRGWCVAACGARGGEMVGSSTVRKVPRFTAAGGGR 237 +N +++++A L A +CG G + +GGE+ GS KVP+ A GGG Sbjct: 260 MNRMSQSQVQAASRLALKAQATNKCGLGLDLKVRTQKGGELGGSPAGGKVPK--APGGGA 317 Query: 236 AK 231 A+ Sbjct: 318 AE 319
>Q5URA6:YR878_MIMIV Putative KilA-N domain-containing protein R878 - Mimivirus| Length = 356 Score = 31.2 bits (69), Expect = 9.5 Identities = 24/93 (25%), Positives = 44/93 (47%) Frame = +1 Query: 886 KRKK*SSSCYVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEF 1065 K K SS Y + E+ S ++ E + D+ + DN + E + +E Sbjct: 39 KSTKSSSKSYKKIYEEFSDSESSNSEISDNDELSDNEISDNESSDDDEISDNESSDDDE- 97 Query: 1066 VSDDEIDDVPINEDEIEFESDDDGVGIEETNDN 1164 +SD+EI D +++ + ++D + IE+ NDN Sbjct: 98 ISDNEISDDDGSDNNVYEDNDIRNIIIEDINDN 130
>P25980:UBF1B_XENLA Nucleolar transcription factor 1-B - Xenopus laevis (African clawed| frog) Length = 701 Score = 31.2 bits (69), Expect = 9.5 Identities = 22/68 (32%), Positives = 36/68 (52%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDEIEFESDDDGV 1140 ED D++ E+ +DD+ + S E + + SD++ ++ NEDE E E DDD Sbjct: 618 EDDEDDEDEEDDDDDDDEDKEDS---SEDGDSSDSSSDEDSEEGEENEDE-EDEEDDDED 673 Query: 1141 GIEETNDN 1164 E+ +DN Sbjct: 674 NEEDDDDN 681
>Q6QA27:TRI44_RAT Tripartite motif-containing protein 44 - Rattus norvegicus (Rat)| Length = 344 Score = 31.2 bits (69), Expect = 9.5 Identities = 22/85 (25%), Positives = 41/85 (48%) Frame = +1 Query: 931 DASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINEDE 1110 D+ + ++ E+ D+ EE+E+D+ E + +E S+ E + +E + Sbjct: 105 DSESEEESETEEDSEDESDEESEEDSEEEMEDEQESEAEEDNQEGESEAEGETEAESEFD 164 Query: 1111 IEFESDDDGVGIEETNDNGL*LSTY 1185 E E + + V + D+GL LSTY Sbjct: 165 PEIEMEAERVAKRKCPDHGLDLSTY 189
>Q9QXA7:TRI44_MOUSE Tripartite motif-containing protein 44 - Mus musculus (Mouse)| Length = 346 Score = 31.2 bits (69), Expect = 9.5 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Frame = +1 Query: 931 DASTAQDWICEDAYVDDEMEETEDDNA--MEPRRSLRVRELHEVEEFVSDDEIDDVPINE 1104 D+ + ++ E+ D+ EE+E+D+ ME + E ++ EE S+ E + +E Sbjct: 106 DSESEEESETEEDSEDESDEESEEDSEEEMEDEQESEAEEDNQ-EEGESEAEGETEAESE 164 Query: 1105 DEIEFESDDDGVGIEETNDNGL*LSTY 1185 + E E + + V + D+GL LSTY Sbjct: 165 FDPEIEMEAERVAKRKCPDHGLDLSTY 191
>Q4PIC4:SPT5_USTMA Transcription elongation factor SPT5 - Ustilago maydis (Smut fungus)| Length = 1057 Score = 31.2 bits (69), Expect = 9.5 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELH---EVEEFVSDDEIDDVPI 1098 +D +D +D DD+ ++ EDD A RR + + + +VE V DDE D + Sbjct: 163 DDEDDDEDDDDDDDDEDDDEDDEEDDTARGQRRRAKKQRRNRFLDVEAEVDDDEED---L 219 Query: 1099 NEDEIEFESDD 1131 +E+E E +D Sbjct: 220 DEEEEELARED 230
>Q4WP96:SPT5_ASPFU Transcription elongation factor spt5 - Aspergillus fumigatus| (Sartorya fumigata) Length = 1058 Score = 31.2 bits (69), Expect = 9.5 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +1 Query: 961 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVS-----DDEIDDVPINEDEIEFES 1125 ED +DE E+ +D ++ PR+ R + L V F+ D+E D+ EDE+EF + Sbjct: 112 EDDEDEDEDEDEQDVSSGRPRK--RRKRLGGVHNFIDTEAGVDEEEDEAEDEEDEMEFGA 169 Query: 1126 D 1128 + Sbjct: 170 E 170
>Q9NEU2:SDA1_CAEEL Protein SDA1 homolog - Caenorhabditis elegans| Length = 801 Score = 31.2 bits (69), Expect = 9.5 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Frame = +1 Query: 919 LLGEDASTAQDWICEDAYVDDEMEETE--------DDNAMEPRRSLRVRELHEVEEFVSD 1074 +L EDA+ + E+ D E++ ++ DD+A EP + E VE Sbjct: 528 ILDEDAADGEQGHLEEDGTDSELDVSDVDTDDVDTDDDADEPVAKKKRVEQKSVENDAES 587 Query: 1075 DEIDDVPINEDEIEFESDDDGVGIEETND 1161 D D+ +E+E++ E ++ + EE + Sbjct: 588 DADDEEIEDEEEMDDEEEEIEISDEEEEE 616
>Q4FLJ5:PURQ_PELUB Phosphoribosylformylglycinamidine synthase 1 - Pelagibacter ubique| Length = 227 Score = 31.2 bits (69), Expect = 9.5 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Frame = +1 Query: 949 DWICEDAYVDDEMEETEDDNAMEPRRSLRVRELH----EVEEFVSDDEIDDVPINEDEIE 1116 ++IC++ +V + DN+ + E H E F S+D+I ++ N Sbjct: 108 EFICKNVFV----KANNKDNSYFKDDKKNIYEFHIAHNEGNYFCSNDQIKEINDNNQIAL 163 Query: 1117 FESDDDGVGIEETNDNG 1167 F SD++G E++N NG Sbjct: 164 FYSDENGNVNEQSNPNG 180
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 31.2 bits (69), Expect = 9.5 Identities = 23/80 (28%), Positives = 37/80 (46%) Frame = +1 Query: 928 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPINED 1107 ED+ +D E+ DDE +E ED++ +EP E+ +D+ DD ++D Sbjct: 143 EDSDEEEDDDSEEDEEDDE-DEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD 201 Query: 1108 EIEFESDDDGVGIEETNDNG 1167 E E D + +E T G Sbjct: 202 E---EDDSEEEAMETTPAKG 218
>Q5KIJ5:FKBP4_CRYNE FK506-binding protein 4 - Cryptococcus neoformans (Filobasidiella| neoformans) Length = 405 Score = 31.2 bits (69), Expect = 9.5 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +1 Query: 949 DWICEDAYVDDEMEETEDDNAMEPR--RSLRVRELHEVEEFVSDDEIDDVPINEDEIEFE 1122 +W ED D+E+ EDD ME + + ++ +VEE S++E +EDE +FE Sbjct: 63 EWSDEDE--DEEILSEEDDGEMEVEEVKQKKGKKAEKVEEEDSEEE------DEDESDFE 114 Query: 1123 SDDDGVGIEETN 1158 + +EETN Sbjct: 115 DE-----LEETN 121
>Q6BL34:DBP10_DEBHA ATP-dependent RNA helicase DBP10 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 932 Score = 31.2 bits (69), Expect = 9.5 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +1 Query: 919 LLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVPI 1098 L G D+ D ++ V DE+ EDD +P + ++E+ S + + Sbjct: 15 LAGSDSEPESDLNSDNEEVQDEIVSDEDDTKHKPNKK------QKLEKGKSKQTFPSLEL 68 Query: 1099 NEDEIEFESDD 1131 ++DE E ES D Sbjct: 69 SDDEAENESKD 79
>Q8HY67:AN32A_CANFA Acidic leucine-rich nuclear phosphoprotein 32 family member A - Canis| familiaris (Dog) Length = 249 Score = 31.2 bits (69), Expect = 9.5 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 9/72 (12%) Frame = +1 Query: 964 DAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIDDVP---------INEDEIE 1116 + YV+ ++ ED++ E +V E E EE + E +DV N+ E++ Sbjct: 161 EGYVEGLDDDEEDEDEEEYDEDAQVVEDEEDEEEEEEGEEEDVSGEEEEDEEGYNDGEVD 220 Query: 1117 FESDDDGVGIEE 1152 E D++ VG EE Sbjct: 221 DEEDEEDVGEEE 232 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 200,471,187 Number of extensions: 4363454 Number of successful extensions: 13751 Number of sequences better than 10.0: 70 Number of HSP's gapped: 13270 Number of HSP's successfully gapped: 79 Length of query: 419 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 303 Effective length of database: 68,868,219 Effective search space: 20867070357 Effective search space used: 20867070357 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
