ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69f18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0131900:Os01g0131900 | 61 | 6e-10 | 2 | AK059239:Os01g0132000 | 61 | 6e-10 | 3 | AB059238:Os01g0132000 | 61 | 6e-10 | 4 | AK105455:Os01g0127600 | 31 | 0.68 | 5 | AK102138:Os01g0127600 | 31 | 0.68 | 6 | AK099279:Os01g0124400 | 31 | 0.68 | 7 | AK064050:Os01g0124400 | 31 | 0.68 | 8 | AK063456:Os07g0432800 | 30 | 1.5 | 9 | Os06g0112700:Os06g0112700 | 29 | 2.6 | 10 | AK066025:Os07g0484700 | 28 | 3.4 | 11 | Os06g0468400:Os06g0468400 | 28 | 4.4 | 12 | AK122066:Os01g0977600 | 27 | 7.6 | 13 | AK099871:Os01g0977600 | 27 | 7.6 | 14 | AK063313:Os04g0594000 | 27 | 9.9 |
|---|
>Os01g0131900:Os01g0131900 | Length = 101 Score = 60.8 bits (146), Expect = 6e-10 Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = +3 Query: 180 KCCNNCR-SFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGPCK 353 KCC+NC SFSG+ C+D KC C +C VV P K F+C D T G CG PCK Sbjct: 45 KCCSNCNFSFSGLYTCEDVVKKCDPVCKSCAVVKTHPVKKFKCTD---TFLGMCGPPCK 100
>AK059239:Os01g0132000 | Length = 100 Score = 60.8 bits (146), Expect = 6e-10 Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +3 Query: 180 KCCNNCR-SFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGPCK 353 KCC+NC SFSG+ CDD KC C C VV P K F+C D T G CG PCK Sbjct: 44 KCCSNCNFSFSGLYTCDDIVKKCDPVCKKCAVVKTYPVKMFKCTD---TFLGMCGPPCK 99
>AB059238:Os01g0132000 | Length = 100 Score = 60.8 bits (146), Expect = 6e-10 Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +3 Query: 180 KCCNNCR-SFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGPCK 353 KCC+NC SFSG+ CDD KC C C VV P K F+C D T G CG PCK Sbjct: 44 KCCSNCNFSFSGLYTCDDIVKKCDPVCKKCAVVKTYPVKMFKCTD---TFLGMCGPPCK 99
>AK105455:Os01g0127600 | Length = 179 Score = 30.8 bits (68), Expect = 0.68 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = +3 Query: 180 KCCNNC---RSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCAD 311 KCC++ RS C D C GC C V P + FRC D Sbjct: 119 KCCDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVESQPPR-FRCLD 164
>AK102138:Os01g0127600 | Length = 179 Score = 30.8 bits (68), Expect = 0.68 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = +3 Query: 180 KCCNNC---RSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCAD 311 KCC++ RS C D C GC C V P + FRC D Sbjct: 119 KCCDDAVCTRSMPPTCSCQDKVKSCSGGCGKCVQVESQPPR-FRCLD 164
>AK099279:Os01g0124400 | Length = 185 Score = 30.8 bits (68), Expect = 0.68 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Frame = +3 Query: 183 CCNNC---RSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGPCK 353 CC N RS + C+D KC C C+ V S + C D G G CK Sbjct: 124 CCTNTTCTRSIPPICRCNDKVKKCAAACKDCKRVKSSKPPRYVCQDQ---FTGQPGPKCK 180
>AK064050:Os01g0124400 | Length = 185 Score = 30.8 bits (68), Expect = 0.68 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Frame = +3 Query: 183 CCNNC---RSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGPCK 353 CC N RS + C+D KC C C+ V S + C D G G CK Sbjct: 124 CCTNTTCTRSIPPICRCNDKVKKCAAACKDCKRVKSSKPPRYVCQDQ---FTGQPGPKCK 180
>AK063456:Os07g0432800 | Length = 145 Score = 29.6 bits (65), Expect = 1.5 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -1 Query: 238 GWASSQTSTPEKDLQLLQHLGKKSAFTWERIP 143 GW TPE+DL L ++ + A W +P Sbjct: 64 GWVKKGPWTPEEDLMLASYIQEHGAGNWRAVP 95
>Os06g0112700:Os06g0112700 | Length = 367 Score = 28.9 bits (63), Expect = 2.6 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -1 Query: 214 TPEKDLQLLQHLGKKSAFTWERIP 143 TPE+D L++++GK +W R+P Sbjct: 19 TPEEDKLLVEYIGKNGHGSWRRLP 42
>AK066025:Os07g0484700 | Length = 167 Score = 28.5 bits (62), Expect = 3.4 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = -1 Query: 238 GWASSQTSTPEKDLQLLQHLGKKSAFTWERIP 143 GW TPE+DL L ++ + + W +P Sbjct: 86 GWVKKGPWTPEEDLMLASYIQEHGSGNWRAVP 117
>Os06g0468400:Os06g0468400 | Length = 548 Score = 28.1 bits (61), Expect = 4.4 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 2/62 (3%) Frame = +3 Query: 180 KCCNNCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTV--DGTCGGPCK 353 +CCN C HP C G ++ P + F C D TV G GG Sbjct: 283 RCCNRC-----------VHPYCIAGEHRAALIQPIDVENFICVDCCPTVKPGGKNGGASS 331 Query: 354 KH 359 H Sbjct: 332 VH 333
>AK122066:Os01g0977600 | Length = 1921 Score = 27.3 bits (59), Expect = 7.6 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = -2 Query: 102 WCPSWLRMNSLSAKLELYLCGLVVECFVMVWCCV 1 WC + ++ S+K++L L ++ ECF WC + Sbjct: 652 WCLD-RKYSTCSSKIDLLLSLIIDECFFDQWCTI 684
>AK099871:Os01g0977600 | Length = 661 Score = 27.3 bits (59), Expect = 7.6 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = -2 Query: 102 WCPSWLRMNSLSAKLELYLCGLVVECFVMVWCCV 1 WC + ++ S+K++L L ++ ECF WC + Sbjct: 133 WCLD-RKYSTCSSKIDLLLSLIIDECFFDQWCTI 165
>AK063313:Os04g0594000 | Length = 492 Score = 26.9 bits (58), Expect = 9.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -1 Query: 517 CRERKHSDDKQRTYCWPYNA 458 CRER DD++ +CW A Sbjct: 445 CRERNFKDDEKYIFCWACRA 464 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,754,533 Number of extensions: 303106 Number of successful extensions: 689 Number of sequences better than 10.0: 14 Number of HSP's gapped: 689 Number of HSP's successfully gapped: 14 Length of query: 195 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 100 Effective length of database: 11,595,960 Effective search space: 1159596000 Effective search space used: 1159596000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
