>LOC_Os01g04050:12001.t00294:unspliced-genomic Bowman-Birk type wound-induced proteinase inhibitor WIP1 precursor,|
           putative, expressed
          Length = 996
 Score = 48.3 bits (99), Expect = 5e-05
 Identities = 20/43 (46%), Positives = 22/43 (51%)
 Frame = +3 / +1

                                                      
Query: 183 CCNNCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCAD 311
           C N   SFSG+  CDD   KC   C  C VV   P K F+C D
Sbjct: 481 CSNCNFSFSGLYTCDDIVKKCDPVCKKCAVVKTYPVKMFKCTD 609



 Score = 31.8 bits (63), Expect(2) = 0.70
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3 / -1

                                
Query: 149 DPHDQDGLEDEDRRQLGALHG 87
           D HD+ GL+ +D ++  ALHG
Sbjct: 213 DSHDKSGLDSQDHQESAALHG 151



 Score = 22.1 bits (42), Expect(2) = 0.70
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1 / -2

                                                 
Query: 313 MSAQRNVL*GLGVTTRQAEQPLGHLGWASSQTSTPEKD 200
           +S   N+  G  +TT    Q   H    SSQ  +PEK+
Sbjct: 611 VSVHLNIFTG*VLTTAHFLQTGSHFLTMSSQV*SPEKE 498

>LOC_Os01g04040:12001.t00293:unspliced-genomic Bowman-Birk type wound-induced proteinase inhibitor WIP1 precursor,|
           putative
          Length = 919

 Score = 48.3 bits (99), Expect = 5e-05
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +3 / +2

                                                      
Query: 183 CCNNCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCAD 311
           C N   SFSG+  C+D   KC   C +C VV   P K F+C D
Sbjct: 752 CSNCNFSFSGLYTCEDVVKKCDPVCKSCAVVKTHPVKKFKCTD 880



 Score = 40.0 bits (81), Expect(2) = 0.001
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -1 / -3

                                                   
Query: 211 PEKDLQLLQHLGKKSAFTWERIPMTRTAWRMRIAASLVPF 92
           P+ +L + +H    S  T  +IPMTRTAWR RI  S++ F
Sbjct: 122 PKLNLTIKKHT*PFSLATAAKIPMTRTAWRTRITMSVLLF 3



 Score = 23.5 bits (45), Expect(2) = 0.001
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -1 / -2

                                                 
Query: 313 MSAQRNVL*GLGVTTRQAEQPLGHLGWASSQTSTPEKD 200
           +S   N   G  +TT Q  Q   H    SSQ  +PEK+
Sbjct: 882 VSVHLNFFTG*VLTTAQLLQTGSHFLTTSSQV*SPEKE 769



 Score = 36.3 bits (73), Expect = 0.18
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3 / -2

                               
Query: 149 DPHDQDGLEDEDRRQLGALH 90
           +PHDQDGLE++D  +  ALH
Sbjct: 60  NPHDQDGLENQDHHERAALH 1

>LOC_Os11g15624:12011.t004407:unspliced-genomic expressed protein|
          Length = 2811

 Score = 36.8 bits (74), Expect = 0.13
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -1 / -1

                                                             
Query: 262 AEQPLGHLGWASSQTSTPEKDLQLLQHLGKKSAFTWERIPMTRTAWRMRI 113
           A+ P G + WA  Q S PE+DL+L  H   K    W      R   R R+
Sbjct: 465 ADTPKGRVRWAGRQQS*PERDLELW*HRAWKWQLRWRTRAGERVKTRSRM 316

>LOC_Os01g60450:12001.t05426:unspliced-genomic trans-cinnamate 4-monooxygenase, putative|
          Length = 1667

 Score = 34.5 bits (69), Expect = 0.63
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3 / +2

                                             
Query: 201 SFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFR 302
           S +G   C  A P+CP   + CR  T S   T+R
Sbjct: 77  SAAGSSACHPAPPRCPSSATGCRSATTSTTATWR 178

>LOC_Os01g58380:12001.t05234:unspliced-genomic 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed|
          Length = 2652

 Score = 34.1 bits (68), Expect = 0.87
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1 / -1

                                               
Query: 433  RVAMLVCGPRYTANNMYAVYRHCVFSLDKKLVLLV 537
            + AML+CGP+   N+ YA++   V + + K  +L+
Sbjct: 1596 KCAMLICGPKLEVNSKYALHLMDVLTKEIKFAMLI 1492

>LOC_Os11g25470:12011.t02164:unspliced-genomic hypothetical protein|
          Length = 857

 Score = 33.6 bits (67), Expect = 1.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3 / -1

                                          
Query: 192 NCRSFSGVDVCDDAHPKCPKGCSACRVVTPS 284
           +CR  +G      AH +C  GC +C++V+ S
Sbjct: 641 SCRRLAGSQHSSTAHARCCPGCLSCKIVSRS 549

>LOC_Os03g45194:12003.t03899:unspliced-genomic short-chain dehydrogenase/reductase SDR, putative, expressed|
          Length = 7513

 Score = 27.2 bits (53), Expect(2) = 2.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3 / +2

                                                
Query: 447 CVWAALYGQQYVRCLSSLCFLSRQKAGVAC*INTSDG 557
           C+W    G Q+ R +  L  +   +   AC  N SDG
Sbjct: 326 CLWMLFVGMQFSRSI*ELVVIDISEILNACVGNNSDG 436



 Score = 22.6 bits (43), Expect(2) = 2.1
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3 / +3

                   
Query: 429 SSCCYACV 452
           SSCC+AC+
Sbjct: 276 SSCCFACL 299

>LOC_Os03g19590:12003.t01724:unspliced-genomic phytochrome B, putative, expressed|
          Length = 8138

 Score = 32.7 bits (65), Expect = 2.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3 / +3

                               
Query: 237 PKCPKGCSACRVVTPSPHKT 296
           P+ P  CS CR  TPSP  T
Sbjct: 651 PRTPPTCSTCRPTTPSPRST 710

>LOC_Os11g07860:12011.t00677:unspliced-genomic hypothetical protein|
          Length = 2303

 Score = 32.7 bits (65), Expect = 2.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2 / +3

                                            
Query: 431  IVLLCLCVGRVIRPTICTLFIVTVFSLSTKSW 526
            +V+LCLC   +I   +C+L  +  FS+ST  W
Sbjct: 951  LVVLCLCNSYLIPFALCSLQPMQSFSISTVGW 1046

>LOC_Os07g25150:12007.t02211:unspliced-genomic myb-related protein Myb4, putative|
          Length = 2810

 Score = 32.7 bits (65), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1 / +1

                                           
Query: 238 GWASSQTSTPEKDLQLLQHLGKKSAFTWERIP 143
           GW      TPE+DL L  ++ +  A  W  +P
Sbjct: 364 GWVKKGPWTPEEDLMLASYIQEHGAGNWRAVP 459

>LOC_Os06g44030:12006.t04091:unspliced-genomic transcription initiation factor TFIID subunit 5, putative, expressed|
          Length = 8844

 Score = 32.7 bits (65), Expect = 2.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2 / +1

                                           
Query: 473  TICTLFIVTVFSLSTKSWCCLLNKHL*WLCV 565
            T C++F++ VFSLS  +W   L  +  W C+
Sbjct: 4159 TCCSMFVLLVFSLSKITWLSQLK*YGRWNCI 4251

>LOC_Os01g70720:12001.t06833:unspliced-genomic expressed protein|
          Length = 3202

 Score = 32.7 bits (65), Expect = 2.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2 / +3

                                           
Query: 431 IVLLCLCVGRVIRPTICTLFIVTVFSLSTKSW 526
           +V+LCLC   +I   +C+L  +  FS+ST  W
Sbjct: 771 LVVLCLCNSYLIPFALCSLQPMQSFSISTVGW 866

>LOC_Os12g34510:12012.t03140:unspliced-genomic histone H2A, putative, expressed|
          Length = 937

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3 / -3

                                       
Query: 398 RHTSSEPEALKRSVLFAWATAGAVDGAL 315
           R++S  PE+ + + LFAW+ AG + GA+
Sbjct: 119 RNSSPLPESTETAPLFAWSLAGEIAGAV 36

>LOC_Os03g37490:12003.t03207:unspliced-genomic transparent testa 12 protein, putative, expressed|
          Length = 6753

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3 / -1

                                           
Query: 404 SRRHTSSEPEALKRSVLFAWATAGAVDGALHV 309
           +RRH   +  AL+  +L   A AG +DGA HV
Sbjct: 198 ARRHRRLQQRALQLLLLLLLAAAGVLDGASHV 103

>LOC_Os12g42680:12012.t03942:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5959

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -1 / -2

                                      
Query: 100  VPFMAADELS*RKARALPVRSSGRML 23
            VPF +   L  R+ R+LP RSSGR+L
Sbjct: 4833 VPFTST*RLEMRRTRSLPSRSSGRVL 4756

>LOC_Os03g01080:12003.t00008:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5964

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -1 / -2

                                      
Query: 100  VPFMAADELS*RKARALPVRSSGRML 23
            VPF +   L  R+ R+LP RSSGR+L
Sbjct: 4838 VPFTST*RLEMRRTRSLPSRSSGRVL 4761

>LOC_Os02g36140:12002.t03251:unspliced-genomic ent-kaurene synthase B, chloroplast precursor, putative, expressed|
          Length = 8408

 Score = 27.6 bits (54), Expect(2) = 3.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3 / +3

                                    
Query: 225 DDAHPKCPKGCSACRVVTPSPHKTF 299
           DD  P C  G S    + P+PH  F
Sbjct: 831 DDRTPNCSSGFSKNIYIQPNPHSEF 905



 Score = 26.7 bits (52), Expect(2) = 3.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2 / +1

                              
Query: 524  WCCLLNKHL*WLCVSTQK 577
            W C  NKH  WLC S  K
Sbjct: 3586 WLC*PNKHHAWLCYS*NK 3639

>LOC_Os09g02400:12009.t00139:unspliced-genomic RNA-binding region RNP-1, putative, expressed|
          Length = 2393

 Score = 31.8 bits (63), Expect = 4.2
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +3 / +2

                                                  
Query: 231 AHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGP 347
           AH + P    AC VVT  PH    CA   S     C  P
Sbjct: 92  AHRQLPFSVGACVVVTGDPHPPPHCAASPSAPSPPCPQP 208

>LOC_Os04g33400:12004.t03021:unspliced-genomic F-box domain containing protein, expressed|
          Length = 1911

 Score = 31.8 bits (63), Expect = 4.2
 Identities = 16/65 (24%), Positives = 22/65 (33%)
 Frame = +3 / +2

                                                                       
Query: 153 SHVNADFFPKCCNNCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDG 332
           S  ++   P+C  +C S S       +       CSAC     S    +R     S    
Sbjct: 569 SRASSPAAPRCAPSCSSTSRAPAASASALAAASCCSACGSTRTSRSSPWRTPPASSASSA 748

                
Query: 333 TCGGP 347
           TC  P
Sbjct: 749 TCASP 763

>LOC_Os06g02250:12006.t00119:unspliced-genomic transcription factor MYB102, putative|
          Length = 1196

 Score = 31.8 bits (63), Expect = 4.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1 / +1

                                   
Query: 214 TPEKDLQLLQHLGKKSAFTWERIP 143
           TPE+D  L++++GK    +W R+P
Sbjct: 55  TPEEDKLLVEYIGKNGHGSWRRLP 126

>LOC_Os06g40020:12006.t03699:unspliced-genomic ATP-dependent RNA helicase ded-1, putative, expressed|
          Length = 5143

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3 / +2

                                                    
Query: 201  SFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKS 320
            S++G   C    P CPK CS  ++ +   H+  R  D K+
Sbjct: 4058 SYNGCH*CSLTGPGCPKCCSCDQLRSSQEHRGLRPQDWKN 4177

>LOC_Os08g37130:12008.t03450:unspliced-genomic short-chain dehydrogenase/reductase SDR, putative, expressed|
          Length = 4460

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1 / -1

                                                  
Query: 514  RERKHSDDKQRTYCWPYNAAHTQA*QHDDCSSHLSFIL 401
            RE+K + D +R +     AAHT    HDD  +  SF L
Sbjct: 4184 REKKKTCDAERGHDARSAAAHTHTTPHDDTINEFSFFL 4071

>LOC_Os07g30130:12007.t02703:unspliced-genomic P-type R2R3 Myb protein, putative, expressed|
          Length = 2976

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1 / +1

                                           
Query: 238 GWASSQTSTPEKDLQLLQHLGKKSAFTWERIP 143
           GW      TPE+DL L  ++ +  +  W  +P
Sbjct: 409 GWVKKGPWTPEEDLMLASYIQEHGSGNWRAVP 504

>LOC_Os02g06584:12002.t00557:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein, expressed|
          Length = 7167

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -1 / -2

                                                             
Query: 535 QATPAFCRERKHSDDKQRTYCWPYNAAHTQA*QHDDCSSHLSFILGGTPR 386
           Q+ P +C +    D  +R   WP+        Q   C S  SF+L   PR
Sbjct: 293 QSIPGWCVKAPREDGGRRMSPWPWAKLQVSRLQLPRCHSAHSFVLYAGPR 144

>LOC_Os01g51200:12001.t04554:unspliced-genomic casein kinase I isoform delta-like, putative, expressed|
          Length = 4866

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2 / +2

                                   
Query: 75  SLSAKLELYLCGLVVECFVMVWCC 4
           SL+ K  L+  GLV  C +  WCC
Sbjct: 428 SLAQKFGLFFGGLVFWCLIGFWCC 499

>LOC_Os05g12610:12005.t01087:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 1555

 Score = 30.9 bits (61), Expect = 8.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3 / -3

                                         
Query: 426 QSSCCYACVWAALYGQQYVRCLSSLCFLSR 515
           Q  CC+  VW  L    +  C+ S CF  R
Sbjct: 350 QQQCCFVVVWMMLSHVAHPGCIRSHCFHKR 261

>LOC_Os02g13830:12002.t01179:unspliced-genomic OsFTL13 - Rice FT-Like13 homogous to Arabidopsis Flowering Locus T|
           gene
          Length = 1576

 Score = 30.9 bits (61), Expect = 8.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3 / +2

                                 
Query: 234 HPKCPKGCSACRVVTPSPHKTF 299
           H  CP+G S C +V   PH T+
Sbjct: 863 HALCPRGRSVCALVHLEPHNTY 928

>LOC_Os03g35454:12003.t03034:unspliced-genomic retrotransposon protein, putative, LINE subclass|
          Length = 9442

 Score = 30.9 bits (61), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2 / +1

                                    
Query: 585  FFFFWVDTHNHQRCLFNKQHQLFV 514
            F F W  TH+ Q C  N  H L+V
Sbjct: 9340 FSFLWGQTHSCQLCFVNNAHILYV 9411

>LOC_Os01g24750:12001.t02194:unspliced-genomic serine/threonine-protein phosphatase PP1, putative, expressed|
          Length = 5112

 Score = 26.3 bits (51), Expect(2) = 9.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3 / -2

                           
Query: 531 AC*INTSDGCACLPKK 578
           +C I+ SD C CLP +
Sbjct: 254 SCRISASDSCTCLPPR 207



 Score = 25.8 bits (50), Expect(2) = 9.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3 / -2

                                      
Query: 420  DEQSSCCYACVWAALYGQQYVRCLSS 497
            D QSSCC  C    L G +Y R  +S
Sbjct: 4220 DNQSSCCVYCQNILLLG*KY*RIETS 4143


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 204,712,079
Number of extensions: 3332142
Number of successful extensions: 13008
Number of sequences better than 10.0: 29
Length of query: 195
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 147
Effective length of database: 52,912,542
Effective search space: 7778143674
Effective search space used: 7778143674
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)