ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66i09 |
|---|---|
| Clone Library Name | barley_pub |
>P46678:TFC5_YEAST Transcription factor TFIIIB B'' component - Saccharomyces cerevisiae| (Baker's yeast) Length = 594 Score = 60.1 bits (144), Expect = 2e-08 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%) Frame = +3 Query: 612 DRTENHGLENPTK-----------LNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAM 758 DR +N +EN K NY SY W+ + FY+ L +G+DF + Sbjct: 382 DRHKNASIENEYKEKVDENPFANLYNYGSYGRGSYTDPWTVEEMIKFYKALSMWGTDFNL 441 Query: 759 IQQLFPDKTRDQMRQKFKTEEKKHPMRVHDAILHRSRDNL--YLKQVIKQL----NIEDL 920 I QL+P ++R Q++ KF EEKK P+ + A+ + N Y ++ K + + + Sbjct: 442 ISQLYPYRSRKQVKAKFVNEEKKRPILIELALRSKLPPNFDEYCCEIKKNIGTVADFNEK 501 Query: 921 PRDINSTHKQEVASIEVDTGNEHALQDLMEEEGDSNWSDKELG 1049 ++ + HK + IE + D+N + K G Sbjct: 502 LIELQNEHKHHMKEIEEAKNTAKEEDQTAQRLNDANLNKKGSG 544
>Q6NRZ0:RCOR2_XENLA REST corepressor 2 - Xenopus laevis (African clawed frog)| Length = 503 Score = 35.4 bits (80), Expect = 0.59 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKFKTEEKKHPMRVHDAILHRSR 869 +WS D LF Q G F IQQ+ P+K + + + + +K R +++ R Sbjct: 131 EWSVEDKVLFEQAFSFHGKSFQRIQQMLPEKLIPSLVKYYYSWKK---TRSRTSVMDRQA 187 Query: 870 DNLYLK------QVIKQLNIEDLPRDINSTHKQEVASIEVDTG 980 L K +V Q+ + D D+ T K+ +V +G Sbjct: 188 RRLQAKREEGMEEVEDQIKMSDNETDVTETKKEAPVPQKVVSG 230 Score = 32.3 bits (72), Expect = 5.0 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 7/58 (12%) Frame = +3 Query: 669 MNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQM-------RQKFKTEE 821 +N + A+W+ + L Q ++++G DF I ++ +KT Q+ R++F EE Sbjct: 324 LNIKLNARWTTDEQLLAVQAVRKYGKDFQAISEVLGNKTPSQVKTFFISYRRRFNLEE 381
>Q9P2K3:RCOR3_HUMAN REST corepressor 3 - Homo sapiens (Human)| Length = 495 Score = 35.0 bits (79), Expect = 0.77 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKFKTEEKKHPMRVHDAILHRSR 869 +W+ D LF Q G F IQQ+ PDKT + + + + +K RSR Sbjct: 88 EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT-----------RSR 136 Query: 870 DNLYLKQVIKQLNIE---DLPRDINSTHKQEVASIEVDTGNE 986 +L +Q K N D D+ TH + + D E Sbjct: 137 TSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKE 178 Score = 33.5 bits (75), Expect = 2.2 Identities = 14/46 (30%), Positives = 27/46 (58%) Frame = +3 Query: 672 NKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKF 809 N++ A+W+ + L QG++++G DF I + +KT Q++ F Sbjct: 283 NQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFF 328
>Q5VVJ2:MYSM1_HUMAN Protein MYSM1 - Homo sapiens (Human)| Length = 828 Score = 35.0 bits (79), Expect = 0.77 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Frame = +3 Query: 606 DNDRTENHGLENPTKLNYHSYMNKQTRA-KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDK 782 ++D+ L+ K+ HS + + KW+ + +LF QGL +FG + I +L + Sbjct: 91 EDDKKYMKSLQKTAKIMVHSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSR 150 Query: 783 T----RDQMRQKFKTEEK 824 T + RQ FK + K Sbjct: 151 TVLQVKSYARQYFKNKVK 168
>Q1A1A4:FOXG1_PIPRU Forkhead box protein G1 - Pipistrellus rusticus (Rusty pipistrelle)| Length = 484 Score = 35.0 bits (79), Expect = 0.77 Identities = 18/57 (31%), Positives = 20/57 (35%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPPL*PQIGACPALYLTNLNHPLPP 1006 P + + HH N HP HH H H PP PQ P P PP Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHPPPPAPQPPPPPQQQPPPPQAPQPP 81
>Q6FSD2:CFT1_CANGA Protein CFT1 - Candida glabrata (Yeast) (Torulopsis glabrata)| Length = 1361 Score = 34.3 bits (77), Expect = 1.3 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 4/115 (3%) Frame = +3 Query: 633 LENPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQK-- 806 +E PT + Y+NKQ A ++ D D DF L+ D+ DQ+ K Sbjct: 439 VEEPTFMK--DYVNKQASAAYNNEDDD-------DDDDDF----NLYSDEENDQVNNKND 485 Query: 807 --FKTEEKKHPMRVHDAILHRSRDNLYLKQVIKQLNIEDLPRDINSTHKQEVASI 965 F T E P + + R+ + V K +IED + + + +KQE++ + Sbjct: 486 RTFGTNESNEPFTAQELMELRNIGPINSMCVGKVSSIEDNVKGLPNPNKQEISIV 540
>Q00939:FOXG1_RAT Forkhead box protein G1 - Rattus norvegicus (Rat)| Length = 480 Score = 34.3 bits (77), Expect = 1.3 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPPL*PQ 1060 P + + HH N HP HH H H PP PQ Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHPPPPAPQ 63
>Q60987:FOXG1_MOUSE Forkhead box protein G1 - Mus musculus (Mouse)| Length = 481 Score = 34.3 bits (77), Expect = 1.3 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPPL*PQ 1060 P + + HH N HP HH H H PP PQ Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHPPPPAPQ 63
>Q1A1A3:FOXG1_EPOGA Forkhead box protein G1 - Epomophorus gambianus (Gambian epauletted| fruit bat) Length = 485 Score = 34.3 bits (77), Expect = 1.3 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPPL*PQ 1060 P + + HH N HP HH H H PP PQ Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHPPPPAPQ 63
>Q96PN7:TREF1_HUMAN Transcriptional-regulating factor 1 - Homo sapiens (Human)| Length = 1200 Score = 33.9 bits (76), Expect = 1.7 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 12/119 (10%) Frame = +3 Query: 633 LENPTKLNYHSYMNKQTRA--KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQK 806 L P +L H N KW+ + LF + L + DF +Q++ KT Q + Sbjct: 868 LRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEY 927 Query: 807 FKTEEK------KHPMR----VHDAILHRSRDNLYLKQVIKQLNIEDLPRDINSTHKQE 953 + T +K KH R + D + + L ++ ED D ST ++E Sbjct: 928 YYTWKKIMRLGRKHRTRLAEIIDDCVTSEEEEEL------EEEEEEDPEEDRKSTKEEE 980
>Q8LJT8:TKI1_ARATH TSL-kinase interacting protein 1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 743 Score = 33.5 bits (75), Expect = 2.2 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +3 Query: 588 PFGENYDNDRTENHGLENPTKLNYHSY-MNKQTR--AKWSKSDTDLFYQGLQQFGSDFAM 758 P GE +++ N L + ++ + K TR A W+ + + F+ L+Q G +F Sbjct: 20 PNGEGRLSNQNSNPNLLSSASISITQFPAKKPTRQWAAWTHQEEESFFTALRQVGKNFEK 79 Query: 759 IQQLFPDKTRDQMRQKF 809 I K +DQ+R + Sbjct: 80 ITSRVQSKNKDQVRHYY 96
>Q6PGA0:RCOR3_MOUSE REST corepressor 3 - Mus musculus (Mouse)| Length = 451 Score = 33.5 bits (75), Expect = 2.2 Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 3/134 (2%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKFKTEEKKHPMRVHDAILHRSR 869 +W+ D LF Q G F IQQ+ PDKT + + + + +K RSR Sbjct: 144 EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT-----------RSR 192 Query: 870 DNLYLKQVIKQLNIE---DLPRDINSTHKQEVASIEVDTGNEHALQDLMEEEGDSNWSDK 1040 +L +Q K N D D+ H + + D E E D Sbjct: 193 TSLMDRQARKLANRHNQGDSDDDVEEAHPMDGNDSDYDPKKEAK----REGNADQPVQTS 248 Query: 1041 ELGTHQSEVREGEH 1082 ++G + E + +H Sbjct: 249 KIGLGRREYQSLQH 262
>O13709:YDZ1_SCHPO Uncharacterized protein C14C4.01c - Schizosaccharomyces pombe| (Fission yeast) Length = 244 Score = 33.1 bits (74), Expect = 2.9 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = +3 Query: 858 HRSRDNLYLKQVIKQLNI-EDLPRDINSTHKQEVASIEVDTGNEHALQDLMEEEGDSNWS 1034 H S + + +K++++ E +P + +K E+ ++E T + LQ EE+ SNW Sbjct: 63 HLSSSTIIINNQLKKIDVNESIPENSTLHNKYELGAVESSTSSLSLLQS-KEEDDSSNWE 121 Query: 1035 DKELGTHQSEVREGE 1079 ++ +S V E E Sbjct: 122 TED---SESAVEEAE 133
>Q8BXJ2:TREF1_MOUSE Transcriptional-regulating factor 1 - Mus musculus (Mouse)| Length = 1205 Score = 33.1 bits (74), Expect = 2.9 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Frame = +3 Query: 633 LENPTKLNYHSYMNKQTRA--KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQK 806 L P +L H N KW+ + LF + L + DF +Q++ KT Q + Sbjct: 874 LRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEY 933 Query: 807 FKTEEK------KHPMRVHDAI 854 + T +K KH R+ + I Sbjct: 934 YYTWKKIMRLGRKHRTRLAEII 955
>Q61687:ATRX_MOUSE Transcriptional regulator ATRX - Mus musculus (Mouse)| Length = 2476 Score = 33.1 bits (74), Expect = 2.9 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 3/151 (1%) Frame = +3 Query: 630 GLENPTKLNYHSYMNKQTRAKWSKSD---TDLFYQGLQQFGSDFAMIQQLFPDKTRDQMR 800 G E PTK H + R K S D TD G+ + S+ + D+ R Sbjct: 1340 GEEKPTKPKEHKEAKGRNRRKVSSEDSEDTDFQESGVSEEVSE-----------SEDEQR 1388 Query: 801 QKFKTEEKKHPMRVHDAILHRSRDNLYLKQVIKQLNIEDLPRDINSTHKQEVASIEVDTG 980 + ++ +K A L ++ + K+ +++ +++ N +H +E + G Sbjct: 1389 PRTRSAKK--------AELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEE----DKKEG 1436 Query: 981 NEHALQDLMEEEGDSNWSDKELGTHQSEVRE 1073 +E +D E+E D N K G + ++R+ Sbjct: 1437 DEEDEEDEDEDEEDENDDSKSPGKGRKKIRK 1467
>Q1A1A1:FOXG1_CERSI Forkhead box protein G1 - Ceratotherium simum (White rhinoceros)| (Square-lipped rhinoceros) Length = 486 Score = 33.1 bits (74), Expect = 2.9 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPP 1072 P + ++ HH N HP HH H H PP Sbjct: 25 PEAVQSDNHHASHGHHNSHHPQHHHHHHHHHHHPP 59
>Q5ZJ40:RCOR3_CHICK REST corepressor 3 - Gallus gallus (Chicken)| Length = 378 Score = 32.7 bits (73), Expect = 3.8 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 3/102 (2%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKFKTEEKKHPMRVHDAILHRSR 869 +W+ D LF Q G F IQQ+ PDKT + + + + +K RSR Sbjct: 88 EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT-----------RSR 136 Query: 870 DNLYLKQVIKQLNIE---DLPRDINSTHKQEVASIEVDTGNE 986 +L +Q K N D D+ H + + D E Sbjct: 137 TSLMDRQARKLANRNNQGDSDDDVEEPHPMDGNDSDYDPKKE 178
>P35928:POLR_ELV RNA replicase polyprotein - Erysimum latent virus (ELV)| Length = 1748 Score = 32.7 bits (73), Expect = 3.8 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +2 Query: 86 LAPRSSDLRWVLGGSVHRPHPHVAPSTASLSILLRHW 196 L P+ + + + G PHPH A T L++L HW Sbjct: 46 LVPQLNRMGIQVSGLTSTPHPHAAHKTLELNLLFNHW 82
>Q9WUU8:NAF1_MOUSE Nef-associated factor 1 - Mus musculus (Mouse)| Length = 647 Score = 32.7 bits (73), Expect = 3.8 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 5/112 (4%) Frame = +3 Query: 159 PQLPPSPFCCATG-----RRRPSFTGSDLVAVYLCSFDLDFQ*IRTT*EELAENKSEVSP 323 P PP+ F G R++ T ++L+ + F+ DFQ R+ E + E K E+ Sbjct: 446 PSSPPAAFGSPEGVGGHLRKQELVTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKK 505 Query: 324 PGRKRAMKDTLTERPDKKLTHRVRQKRTKEVKYLLQKPDHEIDHMKLSVMHL 479 K + TLT K L + K + + K E HM+ H+ Sbjct: 506 QVEKLQAQVTLTNAQLKTLKEEEKAKEALKQQKRKAKASGERYHMEPHPEHV 557
>Q69Z66:MYSM1_MOUSE Protein MYSM1 - Mus musculus (Mouse)| Length = 819 Score = 32.7 bits (73), Expect = 3.8 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = +3 Query: 633 LENPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKT----RDQMR 800 +++P K HS KW+ + +LF QGL +FG + I L +T + R Sbjct: 105 VDSPAKPASHS-------VKWTVEEKELFEQGLAKFGRRWTKIATLLKSRTVLQVKSYAR 157 Query: 801 QKFKTEEK 824 Q FK + K Sbjct: 158 QYFKNKVK 165
>Q62599:MTA1_RAT Metastasis-associated protein MTA1 - Rattus norvegicus (Rat)| Length = 703 Score = 32.7 bits (73), Expect = 3.8 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLF 773 +WS S+ +LF + L+++G DF IQQ F Sbjct: 287 EWSASEANLFEEALEKYGKDFTDIQQDF 314
>Q8K4B0:MTA1_MOUSE Metastasis-associated protein MTA1 - Mus musculus (Mouse)| Length = 715 Score = 32.7 bits (73), Expect = 3.8 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLF 773 +WS S+ +LF + L+++G DF IQQ F Sbjct: 287 EWSASEANLFEEALEKYGKDFTDIQQDF 314
>Q13330:MTA1_HUMAN Metastasis-associated protein MTA1 - Homo sapiens (Human)| Length = 715 Score = 32.7 bits (73), Expect = 3.8 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLF 773 +WS S+ +LF + L+++G DF IQQ F Sbjct: 287 EWSASEANLFEEALEKYGKDFTDIQQDF 314
>Q6BSY1:MAD1_DEBHA Spindle assembly checkpoint component MAD1 - Debaryomyces hansenii| (Yeast) (Torulaspora hansenii) Length = 669 Score = 32.3 bits (72), Expect = 5.0 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Frame = +3 Query: 597 ENYDNDRTENHGLE---NPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQ 767 E+ DN + E H L+ NP + + +QT SK + ++ ++ + + + Sbjct: 477 ESLDNKKKELHILQLKSNPASQD--QLIKQQTLDLLSKENQEMIETFVKNKSAHDMIPKS 534 Query: 768 LFPDKTRDQMRQKFKTEE-KKHPMRVHDAILHRSRDNLYLKQVIKQLNIEDLPRDINS 938 LF + D+++ + K ++ K R+ D +SRD L + IE LP INS Sbjct: 535 LFERQENDKLQLQTKIDQLNKRISRLRDIYSQKSRDILSVISKFFGYTIEFLPSPINS 592
>O76906:CRM_DROME Protein cramped - Drosophila melanogaster (Fruit fly)| Length = 982 Score = 32.3 bits (72), Expect = 5.0 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Frame = +3 Query: 588 PFGENYDNDRTENHGLENPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQ 767 P E N + E + P++L S + W+ + + F+ L +FG DF + Sbjct: 84 PPSEREPNKKEEKAAQKTPSQLKTGS-----GKTTWTNVERNCFFDALNEFGKDFEAVAN 138 Query: 768 LFPDKTRDQMRQ---KFKTEE--KKHPMRVHDAILHRSRDNLYLKQVIKQL 905 K + + FKT++ ++H + H I R + LK+ ++L Sbjct: 139 CINAKLKRRNANSDYSFKTKDQVRQHYYQTHHKICKYVRFSEELKKPAQEL 189
>Q8IN94:OSA_DROME Trithorax group protein osa - Drosophila melanogaster (Fruit fly)| Length = 2716 Score = 32.3 bits (72), Expect = 5.0 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = -1 Query: 1164 SANFHHDYRPSTNQKHPDPGHHQHSQKHAPPL*PQIGACP 1045 +A H+ + Q+HP P H Q Q H P P G P Sbjct: 88 AAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPPPPGGAP 127
>Q5VYV0:FOXB2_HUMAN Forkhead box protein B2 - Homo sapiens (Human)| Length = 432 Score = 32.3 bits (72), Expect = 5.0 Identities = 17/57 (29%), Positives = 22/57 (38%) Frame = -1 Query: 1152 HHDYRPSTNQKHPDPGHHQHSQKHAPPL*PQIGACPALYLTNLNHPLPP*DPATHAH 982 HH + P + H HH H H PP P P ++ + H PP P H Sbjct: 139 HHHHHPHHHHHHHAAAHHHH--HHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPH 193
>P25357:SNT1_YEAST Probable DNA-binding protein SNT1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 1226 Score = 32.0 bits (71), Expect = 6.5 Identities = 15/60 (25%), Positives = 31/60 (51%) Frame = +3 Query: 633 LENPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKFK 812 LEN + H + + WS ++ LF + L++FGS +++I + K+ +R ++ Sbjct: 872 LENALQRKKHKSAPEHKTSYWSVRESQLFPELLKEFGSQWSLISEKLGTKSTTMVRNYYQ 931
>Q6P116:RCOR2_DANRE REST corepressor 2 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 536 Score = 32.0 bits (71), Expect = 6.5 Identities = 29/123 (23%), Positives = 48/123 (39%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKFKTEEKKHPMRVHDAILHRSR 869 +W+ D LF Q G F IQQ+ PDK + + + + +K R +++ R Sbjct: 128 EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKK---TRTRTSVMDRQA 184 Query: 870 DNLYLKQVIKQLNIEDLPRDINSTHKQEVASIEVDTGNEHALQDLMEEEGDSNWSDKELG 1049 L K+ + N E D S + E++ E A Q+ G+ K Sbjct: 185 RKLLSKREKNESNDEIEEGDPGSD-----SDFEINAKKESAKQNSGNGGGNEKGPSKSCL 239 Query: 1050 THQ 1058 T + Sbjct: 240 TRK 242 Score = 31.6 bits (70), Expect = 8.5 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 7/57 (12%) Frame = +3 Query: 672 NKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQM-------RQKFKTEE 821 N++ ++W+ + L Q ++++G DFA I + +KT Q+ R++F EE Sbjct: 326 NQKINSRWTTEEQLLAVQAVRRYGKDFAAIADVIGNKTVAQVSSFFVSYRRRFNLEE 382
>Q8CFE3:RCOR1_MOUSE REST corepressor 1 - Mus musculus (Mouse)| Length = 477 Score = 32.0 bits (71), Expect = 6.5 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 5/98 (5%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKF----KTEEKKHPMRVHDAIL 857 +W+ D LF Q G F IQQ+ PDK+ + + + KT K M H Sbjct: 185 EWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQ 244 Query: 858 HRSRDNLYLK-QVIKQLNIEDLPRDINSTHKQEVASIE 968 R R+ + + N D+ D N K+EV E Sbjct: 245 KREREESEDELEETNGSNPVDIEIDPNKESKKEVPPTE 282
>Q5F3F2:MYSM1_CHICK Protein MYSM1 - Gallus gallus (Chicken)| Length = 832 Score = 32.0 bits (71), Expect = 6.5 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = +3 Query: 633 LENPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKT----RDQMR 800 + +PTK +S KW+ + +LF QGL ++G + I +L +T + R Sbjct: 109 VRSPTKPGSYSL-------KWTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYAR 161 Query: 801 QKFKTEEK 824 Q FK + K Sbjct: 162 QYFKNKAK 169
>P34127:MYBH_DICDI Myb-like protein - Dictyostelium discoideum (Slime mold)| Length = 451 Score = 32.0 bits (71), Expect = 6.5 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +3 Query: 600 NYDNDRTENHGLENPTKLNYHSYMNKQTRAKWSKSDTDLFYQGLQQFG-SDFAMIQQLFP 776 N N+ N+G N + N K+T+ KW+ + + + + ++ I + FP Sbjct: 121 NNMNNNINNNGNSNISNNNTPKVEKKKTKGKWTSEEDQILIKAVNLHNQKNWKKIAEHFP 180 Query: 777 DKTRDQMRQKFKTEEKKHPMRVHDA 851 D+T Q ++ ++ HP V A Sbjct: 181 DRTDVQCHHRY--QKVLHPNLVKGA 203
>P21416:GAG_GALV Gag polyprotein [Contains: Core protein p15; Core protein p12; Core| protein p30; Core protein p10] - Gibbon ape leukemia virus (GALV) Length = 520 Score = 32.0 bits (71), Expect = 6.5 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +2 Query: 17 RSPPPWTDATARRRYDRPCPTSPLAPRSSDLRWVLGGSVHRPHPHVAPSTASLSILLRHW 196 ++PPPW A+A+ +A S R V G P P + P+T L +L Sbjct: 90 QNPPPWVPASAK-----------VAVVSDTRRPVAGRPSAPPRPPIYPATDDLLLLSEPT 138 Query: 197 PPP 205 PPP Sbjct: 139 PPP 141
>P55316:FOXG1_HUMAN Forkhead box protein G1 - Homo sapiens (Human)| Length = 489 Score = 32.0 bits (71), Expect = 6.5 Identities = 12/35 (34%), Positives = 14/35 (40%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPP 1072 P + + HH N HP HH H H PP Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHHPP 59
>Q1A1A2:FOXG1_EQUBU Forkhead box protein G1 - Equus burchelli (Plains zebra) (Equus| quagga) Length = 488 Score = 32.0 bits (71), Expect = 6.5 Identities = 12/35 (34%), Positives = 14/35 (40%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPP 1072 P + + HH N HP HH H H PP Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHHPP 59
>Q1A1A5:FOXG1_CERPY Forkhead box protein G1 - Cercopithecus pygerythrus (Vervet monkey)| Length = 489 Score = 32.0 bits (71), Expect = 6.5 Identities = 12/35 (34%), Positives = 14/35 (40%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPP 1072 P + + HH N HP HH H H PP Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHHPP 59
>Q1A1A6:FOXG1_CEBCA Forkhead box protein G1 - Cebus capucinus (White-faced sapajou)| Length = 489 Score = 32.0 bits (71), Expect = 6.5 Identities = 12/35 (34%), Positives = 14/35 (40%) Frame = -1 Query: 1176 PRTISANFHHDYRPSTNQKHPDPGHHQHSQKHAPP 1072 P + + HH N HP HH H H PP Sbjct: 25 PEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHHPP 59
>Q9UKL0:RCOR1_HUMAN REST corepressor 1 - Homo sapiens (Human)| Length = 482 Score = 31.6 bits (70), Expect = 8.5 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Frame = +3 Query: 690 KWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKF----KTEEKKHPMRVHDAIL 857 +W+ D LF Q G F IQQ+ PDK+ + + + KT K M H Sbjct: 191 EWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQ 250 Query: 858 HRSRDNLYLKQVIKQLNIE---DLPRDINSTHKQEVASIE 968 R R+ + +++ N D+ D N K+EV E Sbjct: 251 KREREE--SEDELEEANGNNPIDIEVDQNKESKKEVPPTE 288
>P01104:MYB_AVIMB Transforming protein Myb - Avian myeloblastosis virus| Length = 382 Score = 31.6 bits (70), Expect = 8.5 Identities = 14/66 (21%), Positives = 37/66 (56%), Gaps = 7/66 (10%) Frame = +3 Query: 657 YHSYMNKQTR-AKWSKSDTDLFYQGLQQFGSDFAMIQQLFPDKTRDQMRQKF------KT 815 +H+++N + + W++ + + YQ ++ G+ +A I +L P +T + ++ + K Sbjct: 63 WHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKV 122 Query: 816 EEKKHP 833 E++ +P Sbjct: 123 EQEGYP 128
>Q9Y2T1:AXN2_HUMAN Axin-2 - Homo sapiens (Human)| Length = 843 Score = 31.6 bits (70), Expect = 8.5 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 8/42 (19%) Frame = -1 Query: 1140 RPSTNQKHPDPGHHQHSQKHA--------PPL*PQIGACPAL 1039 R S + PD HH HSQ H+ PP GACP L Sbjct: 459 RYSPRSRSPDHHHHHHSQYHSLLPPGGKLPPAAASPGACPLL 500 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 231,509,963 Number of extensions: 4899660 Number of successful extensions: 15388 Number of sequences better than 10.0: 40 Number of HSP's gapped: 15318 Number of HSP's successfully gapped: 43 Length of query: 475 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 358 Effective length of database: 68,593,924 Effective search space: 24556624792 Effective search space used: 24556624792 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
