ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf69f04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068830:Os10g0392700 | 46 | 2e-05 | 2 | AK069509:Os02g0649700 | 28 | 2.7 | 3 | Os06g0197300:Os06g0197300 | 27 | 6.0 | 4 | Os06g0197000:Os06g0197000 | 27 | 6.0 | 5 | AK104043:Os07g0657200 | 27 | 6.0 | 6 | AK100911:Os07g0657200 | 27 | 6.0 | 7 | AK100264:Os07g0657200 | 27 | 6.0 | 8 | AK072927:Os07g0657200 | 27 | 6.0 | 9 | AK059603:Os09g0327300 | 27 | 6.0 | 10 | AB042102:Os07g0657200 | 27 | 6.0 | 11 | Os02g0455400:Os02g0455400 | 27 | 7.9 |
|---|
>AK068830:Os10g0392700 | Length = 423 Score = 45.8 bits (107), Expect = 2e-05 Identities = 30/64 (46%), Positives = 37/64 (57%) Frame = +2 Query: 131 VCPLYQDNYEVLLNELDSLSCLT*ESSQSSWISIFVTRGSIRLLNADNAVLDYVHRILIS 310 +CPLY N EVLLNEL S S L SS ++ F T+ LLN N DYV L+S Sbjct: 329 LCPLYPHNPEVLLNELKSPSDLLDFGEFSSCMN-FSTQDGTPLLNVVNPTFDYVPPKLVS 387 Query: 311 LFLS 322 LF++ Sbjct: 388 LFIT 391
>AK069509:Os02g0649700 | Length = 822 Score = 28.5 bits (62), Expect = 2.7 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = -2 Query: 137 DTLQVDKVGVDGLLAASRRRPAVAMHRAEQPGLQ 36 D QV KV VDG+ R RP V EQP +Q Sbjct: 207 DKNQVKKVEVDGVHIMFRLRPEVEARAMEQPQVQ 240
>Os06g0197300:Os06g0197300 | Length = 334 Score = 27.3 bits (59), Expect = 6.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 97 LPRAAADPPSRCIGRSSPAFSRRRLPQR 14 +P + + PP C+ P F RRLP+R Sbjct: 274 MPVSPSSPPPPCVRSPPPPFWPRRLPRR 301
>Os06g0197000:Os06g0197000 | Length = 334 Score = 27.3 bits (59), Expect = 6.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 97 LPRAAADPPSRCIGRSSPAFSRRRLPQR 14 +P + + PP C+ P F RRLP+R Sbjct: 274 MPVSPSSPPPPCVRSPPPPFWPRRLPRR 301
>AK104043:Os07g0657200 | Length = 549 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 317 LSTRKLLGVLLSYVKLFNSDMHHH*LIIL 403 L+++ LL + Y+KL SD H H L IL Sbjct: 160 LASQGLLKTAMEYLKLLGSDEHSHELAIL 188
>AK100911:Os07g0657200 | Length = 1127 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 317 LSTRKLLGVLLSYVKLFNSDMHHH*LIIL 403 L+++ LL + Y+KL SD H H L IL Sbjct: 738 LASQGLLKTAMEYLKLLGSDEHSHELAIL 766
>AK100264:Os07g0657200 | Length = 612 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 317 LSTRKLLGVLLSYVKLFNSDMHHH*LIIL 403 L+++ LL + Y+KL SD H H L IL Sbjct: 223 LASQGLLKTAMEYLKLLGSDEHSHELAIL 251
>AK072927:Os07g0657200 | Length = 1127 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 317 LSTRKLLGVLLSYVKLFNSDMHHH*LIIL 403 L+++ LL + Y+KL SD H H L IL Sbjct: 738 LASQGLLKTAMEYLKLLGSDEHSHELAIL 766
>AK059603:Os09g0327300 | Length = 395 Score = 27.3 bits (59), Expect = 6.0 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%) Frame = -2 Query: 101 LLAASRRRPAVA-----MHRAEQPGLQPPPSPAEETQ 6 LLAA+RRRPA + RA + GL +PA E + Sbjct: 12 LLAATRRRPAAGPLAFLLPRAARAGLHEAAAPAAEEE 48
>AB042102:Os07g0657200 | Length = 1023 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 317 LSTRKLLGVLLSYVKLFNSDMHHH*LIIL 403 L+++ LL + Y+KL SD H H L IL Sbjct: 634 LASQGLLKTAMEYLKLLGSDEHSHELAIL 662
>Os02g0455400:Os02g0455400 | Length = 232 Score = 26.9 bits (58), Expect = 7.9 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 113 GVDGLLAASRRRPAVAMHRAEQPG 42 GVD L+ +RRR A A+ RA +PG Sbjct: 125 GVDLLVVDARRRDAAAVLRAARPG 148 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,027,175 Number of extensions: 258375 Number of successful extensions: 1004 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1001 Number of HSP's successfully gapped: 11 Length of query: 174 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 80 Effective length of database: 11,636,001 Effective search space: 930880080 Effective search space used: 930880080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
