| Clone Name | FLbaf69e14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058190.1| Oryza sativa (japonica cultivar-group) Os03g0809100 (Os03g0809100) mRNA, complete cds Length = 1927 Score = 1029 bits (519), Expect = 0.0 Identities = 1126/1324 (85%), Gaps = 7/1324 (0%) Strand = Plus / Plus Query: 246 cttatcctcatcaacctggcctccataatggagcgggctgatgagaatctcctccccgct 305 ||||||||||||||||| || |||||||||||||||||||||||||||||||| || || Sbjct: 199 cttatcctcatcaacctagcttccataatggagcgggctgatgagaatctccttccggca 258 Query: 306 gtttacaaggaagtcagtgccgccttcgatgctggtcctactgatctggggtaccttacc 365 |||||||||||||||||||| || ||| | ||||||||||||||||||||||| ||||| Sbjct: 259 gtttacaaggaagtcagtgctgctttcaacgctggtcctactgatctggggtatcttacg 318 Query: 366 tttataatgaactttctgaagtccatagcatctcccttggcaggtgtccttgctcttcag 425 ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 319 tttctaatgaactttctcaagtcaatagcatctcccttggcaggtgtccttgcacttcaa 378 Query: 426 tatgaccgccccactattcttgccatcggaactgtcttctgggctctatcaacaggggcc 485 ||||| ||||| | ||||||| || || || |||||||||||| ||||||||||||| Sbjct: 379 tatgatcgccctgcagttcttgctatagggacagtcttctgggctgtatcaacaggggct 438 Query: 486 gttggcgtcagccagtattttcagcaggttgcgttctggagaggtgtaaatggtgttgga 545 ||||| |||||||||||||||||||||||||| |||||||||| ||| |||||| ||||| Sbjct: 439 gttggtgtcagccagtattttcagcaggttgcattctggagagctgtgaatggtcttgga 498 Query: 546 cttgccattgtcataccatcacttcagtccttcattgctgatagctacagagatggcacc 605 || |||||||| ||||| ||||||| |||||||||||||||||||||| |||||| || Sbjct: 499 ctagccattgtaataccggcacttcaatccttcattgctgatagctacaaagatggtaca 558 Query: 606 cgtggcgccggttttggtttgttgagcctcattggctcaataggtggtataggaggaagt 665 || || || || ||||| ||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 559 cgcggagcagggtttggcttgttaagcctcattggttcaataggtggtataggtggaagt 618 Query: 666 attgtcgcaactgtcatggctggaagggattattggggatttcctggatggcggtttgca 725 ||| | ||||| |||||||||| |||||||| |||||||| || |||||| |||||||| Sbjct: 619 attttagcaacaatcatggctggtagggattactggggattgccaggatggaggtttgca 678 Query: 726 tttattgtggtcgcgtttgcaagcttgttgattgggtttcttgtttacttctacaccgtt 785 ||| | |||| || ||| |||||||| |||||| ||||||| ||||| ||||| ||| Sbjct: 679 tttctaatggttgcatttcttagcttgttaattgggcttcttgtctacttttacacggtt 738 Query: 786 gatcctagaaaaacatctccaggcaattttggtgacgacga----cactcatgagaggtc 841 |||||||||||| |||||| || |||||||||| ||||| ||| ||||||||||| Sbjct: 739 gatcctagaaaagtgtctccaagccattttggtgatgacgaggaccac-catgagaggtc 797 Query: 842 acgtttggttggcaacagtgttttccctccactgtccatctggaaggattcatggataac 901 | |||| | || || || |||| ||||||| |||||||||||||||||| |||||| | Sbjct: 798 gcatttgatcggtaatggtatttttcctccacagtccatctggaaggattcctggatagc 857 Query: 902 agcaagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcgg 961 |||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||| || Sbjct: 858 agcaagatctgtcatgaaagtgcgaacatttcaaatcattgtcttgcagggcatagttgg 917 Query: 962 ctccttgccatggactgctgttgttttcttcacaatgtggtttgagctaattggtttcga 1021 ||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 918 ctcattgccatggactgctgtagttttcttcacaatgtggtttgagctcattggttttga 977 Query: 1022 caacaaaagctcggcggggttaaacagcctgttcgccatcggctgcgcgagtggatcatt 1081 ||| | || || || | | |||||||| |||| || ||||| || || ||||||||||| Sbjct: 978 caatagcagttcagcagcgctaaacagcatgtttgctatcggttgtgccagtggatcatt 1037 Query: 1082 tcttggtggagtaatcgcagaccgcgtgtcaagacgctacccagactcaggtcgcatcat 1141 ||| || |||||||| |||||||| |||||| | ||| || || |||| ||||||||| Sbjct: 1038 tctaggcggagtaattgcagaccgtctgtcaaaatactatcctgattcagctcgcatcat 1097 Query: 1142 gtgcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacggtcat 1201 ||| |||||||| |||||||||||||| ||||||||| | ||||||||||| || ||||| Sbjct: 1098 gtgtgctcagtttagcgccttcatgggtatccctttctcttggatcctccttacagtcat 1157 Query: 1202 cccgcagtcggtcgactactggtacagc-tacgccgtcacgctgttcctgatggggctca 1260 || ||||| ||||||||||||| | || | || ||||| || ||| |||||||| | | Sbjct: 1158 tcctcagtcagtcgactactggt-ctgcttttgctgtcactctcttcttgatggggatta 1216 Query: 1261 ccataagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctccca 1320 |||| ||||||||||| || ||||| |||||||| ||||| |||||||| |||||||||| Sbjct: 1217 ccatcagctggtgcgctacttgcgcaaacaaccccatgtttgcggaggtagtccctccca 1276 Query: 1321 agcaccgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgctgg 1380 |||||||||| |||||||| || |||||||||||||||||||| || || | || |||| Sbjct: 1277 agcaccgcacgatgatctatgccttcgaccgcgcgttcgagggttcatttgcctccctgg 1336 Query: 1381 ctgctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacggtga 1440 ||||||| || || |||||||| || ||||| |||||||||||||||| ||||| || | Sbjct: 1337 ctgctcctgctgttggcatggtcactgagaagatctatggctacaacgcaaagaccgtca 1396 Query: 1441 atctagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgaccatga 1500 |||| | | || ||||| ||||||||||| || ||||| ||||| || |||| |||| Sbjct: 1397 atctggaaaatggatcggtagcaggggcgtatgcactctcgagggggctattgacaatga 1456 Query: 1501 tgatcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttcaagc 1560 |||| ||||| || || ||||||| | | ||||||| |||||| |||||||||||||||| Sbjct: 1457 tgattgttccttttggcctgtgcttcttgttctacagcccactgtactttgtgttcaagc 1516 Query: 1561 gcga 1564 |||| Sbjct: 1517 gcga 1520
>dbj|AK070392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049P03, full insert sequence Length = 1928 Score = 1029 bits (519), Expect = 0.0 Identities = 1126/1324 (85%), Gaps = 7/1324 (0%) Strand = Plus / Plus Query: 246 cttatcctcatcaacctggcctccataatggagcgggctgatgagaatctcctccccgct 305 ||||||||||||||||| || |||||||||||||||||||||||||||||||| || || Sbjct: 200 cttatcctcatcaacctagcttccataatggagcgggctgatgagaatctccttccggca 259 Query: 306 gtttacaaggaagtcagtgccgccttcgatgctggtcctactgatctggggtaccttacc 365 |||||||||||||||||||| || ||| | ||||||||||||||||||||||| ||||| Sbjct: 260 gtttacaaggaagtcagtgctgctttcaacgctggtcctactgatctggggtatcttacg 319 Query: 366 tttataatgaactttctgaagtccatagcatctcccttggcaggtgtccttgctcttcag 425 ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 320 tttctaatgaactttctcaagtcaatagcatctcccttggcaggtgtccttgcacttcaa 379 Query: 426 tatgaccgccccactattcttgccatcggaactgtcttctgggctctatcaacaggggcc 485 ||||| ||||| | ||||||| || || || |||||||||||| ||||||||||||| Sbjct: 380 tatgatcgccctgcagttcttgctatagggacagtcttctgggctgtatcaacaggggct 439 Query: 486 gttggcgtcagccagtattttcagcaggttgcgttctggagaggtgtaaatggtgttgga 545 ||||| |||||||||||||||||||||||||| |||||||||| ||| |||||| ||||| Sbjct: 440 gttggtgtcagccagtattttcagcaggttgcattctggagagctgtgaatggtcttgga 499 Query: 546 cttgccattgtcataccatcacttcagtccttcattgctgatagctacagagatggcacc 605 || |||||||| ||||| ||||||| |||||||||||||||||||||| |||||| || Sbjct: 500 ctagccattgtaataccggcacttcaatccttcattgctgatagctacaaagatggtaca 559 Query: 606 cgtggcgccggttttggtttgttgagcctcattggctcaataggtggtataggaggaagt 665 || || || || ||||| ||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 560 cgcggagcagggtttggcttgttaagcctcattggttcaataggtggtataggtggaagt 619 Query: 666 attgtcgcaactgtcatggctggaagggattattggggatttcctggatggcggtttgca 725 ||| | ||||| |||||||||| |||||||| |||||||| || |||||| |||||||| Sbjct: 620 attttagcaacaatcatggctggtagggattactggggattgccaggatggaggtttgca 679 Query: 726 tttattgtggtcgcgtttgcaagcttgttgattgggtttcttgtttacttctacaccgtt 785 ||| | |||| || ||| |||||||| |||||| ||||||| ||||| ||||| ||| Sbjct: 680 tttctaatggttgcatttcttagcttgttaattgggcttcttgtctacttttacacggtt 739 Query: 786 gatcctagaaaaacatctccaggcaattttggtgacgacga----cactcatgagaggtc 841 |||||||||||| |||||| || |||||||||| ||||| ||| ||||||||||| Sbjct: 740 gatcctagaaaagtgtctccaagccattttggtgatgacgaggaccac-catgagaggtc 798 Query: 842 acgtttggttggcaacagtgttttccctccactgtccatctggaaggattcatggataac 901 | |||| | || || || |||| ||||||| |||||||||||||||||| |||||| | Sbjct: 799 gcatttgatcggtaatggtatttttcctccacagtccatctggaaggattcctggatagc 858 Query: 902 agcaagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcgg 961 |||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||| || Sbjct: 859 agcaagatctgtcatgaaagtgcgaacatttcaaatcattgtcttgcagggcatagttgg 918 Query: 962 ctccttgccatggactgctgttgttttcttcacaatgtggtttgagctaattggtttcga 1021 ||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 919 ctcattgccatggactgctgtagttttcttcacaatgtggtttgagctcattggttttga 978 Query: 1022 caacaaaagctcggcggggttaaacagcctgttcgccatcggctgcgcgagtggatcatt 1081 ||| | || || || | | |||||||| |||| || ||||| || || ||||||||||| Sbjct: 979 caatagcagttcagcagcgctaaacagcatgtttgctatcggttgtgccagtggatcatt 1038 Query: 1082 tcttggtggagtaatcgcagaccgcgtgtcaagacgctacccagactcaggtcgcatcat 1141 ||| || |||||||| |||||||| |||||| | ||| || || |||| ||||||||| Sbjct: 1039 tctaggcggagtaattgcagaccgtctgtcaaaatactatcctgattcagctcgcatcat 1098 Query: 1142 gtgcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacggtcat 1201 ||| |||||||| |||||||||||||| ||||||||| | ||||||||||| || ||||| Sbjct: 1099 gtgtgctcagtttagcgccttcatgggtatccctttctcttggatcctccttacagtcat 1158 Query: 1202 cccgcagtcggtcgactactggtacagc-tacgccgtcacgctgttcctgatggggctca 1260 || ||||| ||||||||||||| | || | || ||||| || ||| |||||||| | | Sbjct: 1159 tcctcagtcagtcgactactggt-ctgcttttgctgtcactctcttcttgatggggatta 1217 Query: 1261 ccataagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctccca 1320 |||| ||||||||||| || ||||| |||||||| ||||| |||||||| |||||||||| Sbjct: 1218 ccatcagctggtgcgctacttgcgcaaacaaccccatgtttgcggaggtagtccctccca 1277 Query: 1321 agcaccgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgctgg 1380 |||||||||| |||||||| || |||||||||||||||||||| || || | || |||| Sbjct: 1278 agcaccgcacgatgatctatgccttcgaccgcgcgttcgagggttcatttgcctccctgg 1337 Query: 1381 ctgctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacggtga 1440 ||||||| || || |||||||| || ||||| |||||||||||||||| ||||| || | Sbjct: 1338 ctgctcctgctgttggcatggtcactgagaagatctatggctacaacgcaaagaccgtca 1397 Query: 1441 atctagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgaccatga 1500 |||| | | || ||||| ||||||||||| || ||||| ||||| || |||| |||| Sbjct: 1398 atctggaaaatggatcggtagcaggggcgtatgcactctcgagggggctattgacaatga 1457 Query: 1501 tgatcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttcaagc 1560 |||| ||||| || || ||||||| | | ||||||| |||||| |||||||||||||||| Sbjct: 1458 tgattgttccttttggcctgtgcttcttgttctacagcccactgtactttgtgttcaagc 1517 Query: 1561 gcga 1564 |||| Sbjct: 1518 gcga 1521
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 557 bits (281), Expect = e-155 Identities = 539/625 (86%) Strand = Plus / Plus Query: 202 cttctttcaggggaagaaagatgatttatggattctccatctcccttatcctcatcaacc 261 |||||||||||| || |||||| ||| ||| || ||| | || |||||||||||||||| Sbjct: 128832 cttctttcagggcaaagaagatgttttttggtttttccgtttctcttatcctcatcaacc 128891 Query: 262 tggcctccataatggagcgggctgatgagaatctcctccccgctgtttacaaggaagtca 321 | || |||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 128892 tagcttccataatggagcgggctgatgagaatctccttccggcagtttacaaggaagtca 128951 Query: 322 gtgccgccttcgatgctggtcctactgatctggggtaccttacctttataatgaactttc 381 |||| || ||| | ||||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 128952 gtgctgctttcaacgctggtcctactgatctggggtatcttacgtttctaatgaactttc 129011 Query: 382 tgaagtccatagcatctcccttggcaggtgtccttgctcttcagtatgaccgccccacta 441 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| | Sbjct: 129012 tcaagtcaatagcatctcccttggcaggtgtccttgcacttcaatatgatcgccctgcag 129071 Query: 442 ttcttgccatcggaactgtcttctgggctctatcaacaggggccgttggcgtcagccagt 501 ||||||| || || || |||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 129072 ttcttgctatagggacagtcttctgggctgtatcaacaggggctgttggtgtcagccagt 129131 Query: 502 attttcagcaggttgcgttctggagaggtgtaaatggtgttggacttgccattgtcatac 561 |||||||||||||||| |||||||||| ||| |||||| ||||||| |||||||| |||| Sbjct: 129132 attttcagcaggttgcattctggagagctgtgaatggtcttggactagccattgtaatac 129191 Query: 562 catcacttcagtccttcattgctgatagctacagagatggcacccgtggcgccggttttg 621 | ||||||| |||||||||||||||||||||| |||||| || || || || || |||| Sbjct: 129192 cggcacttcaatccttcattgctgatagctacaaagatggtacacgcggagcagggtttg 129251 Query: 622 gtttgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtca 681 | ||||| ||||||||||| ||||||||||||||||| ||||||||| | ||||| ||| Sbjct: 129252 gcttgttaagcctcattggttcaataggtggtataggtggaagtattttagcaacaatca 129311 Query: 682 tggctggaagggattattggggatttcctggatggcggtttgcatttattgtggtcgcgt 741 ||||||| |||||||| |||||||| || |||||| ||||||||||| | |||| || | Sbjct: 129312 tggctggtagggattactggggattgccaggatggaggtttgcatttctaatggttgcat 129371 Query: 742 ttgcaagcttgttgattgggtttcttgtttacttctacaccgttgatcctagaaaaacat 801 || |||||||| |||||| ||||||| ||||| ||||| ||||||||||||||| | Sbjct: 129372 ttcttagcttgttaattgggcttcttgtctacttttacacggttgatcctagaaaagtgt 129431 Query: 802 ctccaggcaattttggtgacgacga 826 ||||| || |||||||||| ||||| Sbjct: 129432 ctccaagccattttggtgatgacga 129456 Score = 325 bits (164), Expect = 4e-85 Identities = 436/524 (83%), Gaps = 2/524 (0%) Strand = Plus / Plus Query: 1042 taaacagcctgttcgccatcggctgcgcgagtggatcatttcttggtggagtaatcgcag 1101 |||||||| |||| || ||||| || || |||||||||||||| || |||||||| |||| Sbjct: 130095 taaacagcatgtttgctatcggttgtgccagtggatcatttctaggcggagtaattgcag 130154 Query: 1102 accgcgtgtcaagacgctacccagactcaggtcgcatcatgtgcgctcagttcagcgcct 1161 |||| |||||| | ||| || || |||| |||||||||||| |||||||| ||||||| Sbjct: 130155 accgtctgtcaaaatactatcctgattcagctcgcatcatgtgtgctcagtttagcgcct 130214 Query: 1162 tcatgggcatccctttcacatggatcctcctcacggtcatcccgcagtcggtcgactact 1221 ||||||| ||||||||| | ||||||||||| || ||||| || ||||| |||||||||| Sbjct: 130215 tcatgggtatccctttctcttggatcctccttacagtcattcctcagtcagtcgactact 130274 Query: 1222 ggtacagctac-gccgtcacgctgttcctgatggggctcaccataagctggtgcgccacc 1280 ||| | ||| || ||||| || ||| |||||||| | ||||| ||||||||||| || Sbjct: 130275 ggt-ctgcttttgctgtcactctcttcttgatggggattaccatcagctggtgcgctact 130333 Query: 1281 tgcgccaacaacccgatgttcgcggaggtggtccctcccaagcaccgcaccatgatctac 1340 ||||| |||||||| ||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 130334 tgcgcaaacaaccccatgtttgcggaggtagtccctcccaagcaccgcacgatgatctat 130393 Query: 1341 gcattcgaccgcgcgttcgagggctccttctcgtcgctggctgctcccgccgtcggcatg 1400 || |||||||||||||||||||| || || | || ||||||||||| || || |||||| Sbjct: 130394 gccttcgaccgcgcgttcgagggttcatttgcctccctggctgctcctgctgttggcatg 130453 Query: 1401 gtgacagagaaagtctatggctacaacgccaagacggtgaatctagcggacgggtcggtg 1460 || || ||||| |||||||||||||||| ||||| || ||||| | | || ||||| Sbjct: 130454 gtcactgagaagatctatggctacaacgcaaagaccgtcaatctggaaaatggatcggta 130513 Query: 1461 gcaggggcgtacgcgctctcaaggggactgctgaccatgatgatcgttcccttcggtctg 1520 ||||||||||| || ||||| ||||| || |||| |||||||| ||||| || || ||| Sbjct: 130514 gcaggggcgtatgcactctcgagggggctattgacaatgatgattgttccttttggcctg 130573 Query: 1521 tgctgcctcttctacaccccactctactttgtgttcaagcgcga 1564 |||| | | ||||||| |||||| |||||||||||||||||||| Sbjct: 130574 tgcttcttgttctacagcccactgtactttgtgttcaagcgcga 130617 Score = 212 bits (107), Expect = 4e-51 Identities = 143/155 (92%) Strand = Plus / Plus Query: 862 ttttccctccactgtccatctggaaggattcatggataacagcaagatctgtcatgaaag 921 |||| ||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 129831 tttttcctccacagtccatctggaaggattcctggatagcagcaagatctgtcatgaaag 129890 Query: 922 tgcggacatttcaaatcatcgtcctgcaaggcatagtcggctccttgccatggactgctg 981 |||| |||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||| Sbjct: 129891 tgcgaacatttcaaatcattgtcttgcagggcatagttggctcattgccatggactgctg 129950 Query: 982 ttgttttcttcacaatgtggtttgagctaattggt 1016 | |||||||||||||||||||||||||| |||||| Sbjct: 129951 tagttttcttcacaatgtggtttgagctcattggt 129985
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 557 bits (281), Expect = e-155 Identities = 539/625 (86%) Strand = Plus / Minus Query: 202 cttctttcaggggaagaaagatgatttatggattctccatctcccttatcctcatcaacc 261 |||||||||||| || |||||| ||| ||| || ||| | || |||||||||||||||| Sbjct: 33626720 cttctttcagggcaaagaagatgttttttggtttttccgtttctcttatcctcatcaacc 33626661 Query: 262 tggcctccataatggagcgggctgatgagaatctcctccccgctgtttacaaggaagtca 321 | || |||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 33626660 tagcttccataatggagcgggctgatgagaatctccttccggcagtttacaaggaagtca 33626601 Query: 322 gtgccgccttcgatgctggtcctactgatctggggtaccttacctttataatgaactttc 381 |||| || ||| | ||||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 33626600 gtgctgctttcaacgctggtcctactgatctggggtatcttacgtttctaatgaactttc 33626541 Query: 382 tgaagtccatagcatctcccttggcaggtgtccttgctcttcagtatgaccgccccacta 441 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| | Sbjct: 33626540 tcaagtcaatagcatctcccttggcaggtgtccttgcacttcaatatgatcgccctgcag 33626481 Query: 442 ttcttgccatcggaactgtcttctgggctctatcaacaggggccgttggcgtcagccagt 501 ||||||| || || || |||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 33626480 ttcttgctatagggacagtcttctgggctgtatcaacaggggctgttggtgtcagccagt 33626421 Query: 502 attttcagcaggttgcgttctggagaggtgtaaatggtgttggacttgccattgtcatac 561 |||||||||||||||| |||||||||| ||| |||||| ||||||| |||||||| |||| Sbjct: 33626420 attttcagcaggttgcattctggagagctgtgaatggtcttggactagccattgtaatac 33626361 Query: 562 catcacttcagtccttcattgctgatagctacagagatggcacccgtggcgccggttttg 621 | ||||||| |||||||||||||||||||||| |||||| || || || || || |||| Sbjct: 33626360 cggcacttcaatccttcattgctgatagctacaaagatggtacacgcggagcagggtttg 33626301 Query: 622 gtttgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtca 681 | ||||| ||||||||||| ||||||||||||||||| ||||||||| | ||||| ||| Sbjct: 33626300 gcttgttaagcctcattggttcaataggtggtataggtggaagtattttagcaacaatca 33626241 Query: 682 tggctggaagggattattggggatttcctggatggcggtttgcatttattgtggtcgcgt 741 ||||||| |||||||| |||||||| || |||||| ||||||||||| | |||| || | Sbjct: 33626240 tggctggtagggattactggggattgccaggatggaggtttgcatttctaatggttgcat 33626181 Query: 742 ttgcaagcttgttgattgggtttcttgtttacttctacaccgttgatcctagaaaaacat 801 || |||||||| |||||| ||||||| ||||| ||||| ||||||||||||||| | Sbjct: 33626180 ttcttagcttgttaattgggcttcttgtctacttttacacggttgatcctagaaaagtgt 33626121 Query: 802 ctccaggcaattttggtgacgacga 826 ||||| || |||||||||| ||||| Sbjct: 33626120 ctccaagccattttggtgatgacga 33626096 Score = 325 bits (164), Expect = 4e-85 Identities = 436/524 (83%), Gaps = 2/524 (0%) Strand = Plus / Minus Query: 1042 taaacagcctgttcgccatcggctgcgcgagtggatcatttcttggtggagtaatcgcag 1101 |||||||| |||| || ||||| || || |||||||||||||| || |||||||| |||| Sbjct: 33625457 taaacagcatgtttgctatcggttgtgccagtggatcatttctaggcggagtaattgcag 33625398 Query: 1102 accgcgtgtcaagacgctacccagactcaggtcgcatcatgtgcgctcagttcagcgcct 1161 |||| |||||| | ||| || || |||| |||||||||||| |||||||| ||||||| Sbjct: 33625397 accgtctgtcaaaatactatcctgattcagctcgcatcatgtgtgctcagtttagcgcct 33625338 Query: 1162 tcatgggcatccctttcacatggatcctcctcacggtcatcccgcagtcggtcgactact 1221 ||||||| ||||||||| | ||||||||||| || ||||| || ||||| |||||||||| Sbjct: 33625337 tcatgggtatccctttctcttggatcctccttacagtcattcctcagtcagtcgactact 33625278 Query: 1222 ggtacagctac-gccgtcacgctgttcctgatggggctcaccataagctggtgcgccacc 1280 ||| | ||| || ||||| || ||| |||||||| | ||||| ||||||||||| || Sbjct: 33625277 ggt-ctgcttttgctgtcactctcttcttgatggggattaccatcagctggtgcgctact 33625219 Query: 1281 tgcgccaacaacccgatgttcgcggaggtggtccctcccaagcaccgcaccatgatctac 1340 ||||| |||||||| ||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 33625218 tgcgcaaacaaccccatgtttgcggaggtagtccctcccaagcaccgcacgatgatctat 33625159 Query: 1341 gcattcgaccgcgcgttcgagggctccttctcgtcgctggctgctcccgccgtcggcatg 1400 || |||||||||||||||||||| || || | || ||||||||||| || || |||||| Sbjct: 33625158 gccttcgaccgcgcgttcgagggttcatttgcctccctggctgctcctgctgttggcatg 33625099 Query: 1401 gtgacagagaaagtctatggctacaacgccaagacggtgaatctagcggacgggtcggtg 1460 || || ||||| |||||||||||||||| ||||| || ||||| | | || ||||| Sbjct: 33625098 gtcactgagaagatctatggctacaacgcaaagaccgtcaatctggaaaatggatcggta 33625039 Query: 1461 gcaggggcgtacgcgctctcaaggggactgctgaccatgatgatcgttcccttcggtctg 1520 ||||||||||| || ||||| ||||| || |||| |||||||| ||||| || || ||| Sbjct: 33625038 gcaggggcgtatgcactctcgagggggctattgacaatgatgattgttccttttggcctg 33624979 Query: 1521 tgctgcctcttctacaccccactctactttgtgttcaagcgcga 1564 |||| | | ||||||| |||||| |||||||||||||||||||| Sbjct: 33624978 tgcttcttgttctacagcccactgtactttgtgttcaagcgcga 33624935 Score = 212 bits (107), Expect = 4e-51 Identities = 143/155 (92%) Strand = Plus / Minus Query: 862 ttttccctccactgtccatctggaaggattcatggataacagcaagatctgtcatgaaag 921 |||| ||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 33625721 tttttcctccacagtccatctggaaggattcctggatagcagcaagatctgtcatgaaag 33625662 Query: 922 tgcggacatttcaaatcatcgtcctgcaaggcatagtcggctccttgccatggactgctg 981 |||| |||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||| Sbjct: 33625661 tgcgaacatttcaaatcattgtcttgcagggcatagttggctcattgccatggactgctg 33625602 Query: 982 ttgttttcttcacaatgtggtttgagctaattggt 1016 | |||||||||||||||||||||||||| |||||| Sbjct: 33625601 tagttttcttcacaatgtggtttgagctcattggt 33625567
>ref|NM_001065699.1| Oryza sativa (japonica cultivar-group) Os07g0208900 (Os07g0208900) mRNA, partial cds Length = 1916 Score = 396 bits (200), Expect = e-106 Identities = 548/664 (82%) Strand = Plus / Plus Query: 904 caagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcggct 963 |||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||| | || | Sbjct: 826 caagatctgtaatgaaggtgcggacgtttcagatcatcgtcctgcaaggaataattggat 885 Query: 964 ccttgccatggactgctgttgttttcttcacaatgtggtttgagctaattggtttcgaca 1023 | |||||||||||||| | ||||||||||||||||||||||| || || ||||| |||| Sbjct: 886 cattgccatggactgccatagttttcttcacaatgtggtttgaactcatcggttttgaca 945 Query: 1024 acaaaagctcggcggggttaaacagcctgttcgccatcggctgcgcgagtggatcatttc 1083 | || |||||||||| || || |||||||| ||||| || ||||| | |||| | || | Sbjct: 946 ataacagctcggcggcattgaatagcctgtttgccattgggtgcgcaactggagctttcc 1005 Query: 1084 ttggtggagtaatcgcagaccgcgtgtcaagacgctacccagactcaggtcgcatcatgt 1143 |||| || || || ||||| ||| | || ||| || ||||| || | || |||||| Sbjct: 1006 ttggaggggtgatagcagatcgcctctcgcgacactttccagattctgcacgtgtcatgt 1065 Query: 1144 gcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacggtcatcc 1203 | ||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||| Sbjct: 1066 gtgctcagttcagtgccttcatgggcatccctttctcgtggatcctcctgacggtcatcc 1125 Query: 1204 cgcagtcggtcgactactggtacagctacgccgtcacgctgttcctgatggggctcacca 1263 |||||||||| || ||||||| | |||||||||||| || ||| | ||||| |||||| Sbjct: 1126 cgcagtcggttgattactggtccgcctacgccgtcaccctcttcttcatgggcatcacca 1185 Query: 1264 taagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctcccaagc 1323 |||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 1186 taagctggtgcgccacctctgcaaacaaccccatgtttgcggaggtagtccctcccaagc 1245 Query: 1324 accgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgctggctg 1383 |||| |||||||||||||| |||||||| || ||||||||||| ||| | |||||||| | Sbjct: 1246 accggaccatgatctacgccttcgaccgtgcattcgagggctcattcgcctcgctggcag 1305 Query: 1384 ctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacggtgaatc 1443 ||||||| |||||| |||| || ||||| | |||||||| || |||||| ||||| | Sbjct: 1306 ctcccgctgtcggcttggtcaccgagaagatatatggctatgacagcaagactgtgaacc 1365 Query: 1444 tagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgaccatgatga 1503 | ||| ||||||| | | ||| ||||| |||||||| |||||||| ||||| ||||||| Sbjct: 1366 ttgcgaacgggtcagcagaaggagcgtatgcgctctccaggggacttctgacaatgatga 1425 Query: 1504 tcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttcaagcgcg 1563 | ||||| ||||| | ||| ||| ||||||| ||| | ||| ||||||||||||| | Sbjct: 1426 ttgttcctttcggcgtctgcgtcctgttctacagccccttgtaccttgtgttcaagcgtg 1485 Query: 1564 accg 1567 |||| Sbjct: 1486 accg 1489 Score = 168 bits (85), Expect = 5e-38 Identities = 232/281 (82%) Strand = Plus / Plus Query: 456 actgtcttctgggctctatcaacaggggccgttggcgtcagccagtattttcagcaggtt 515 |||||||||||||| ||||||||||||| ||||| || |||||| |||| | ||||||| Sbjct: 378 actgtcttctgggccttatcaacaggggctgttggagttagccagcatttccggcaggtt 437 Query: 516 gcgttctggagaggtgtaaatggtgttggacttgccattgtcataccatcacttcagtcc 575 || |||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 438 gcattctggagagctgtaaatggccttggacttgctattgtaataccggcacttcagtcg 497 Query: 576 ttcattgctgatagctacagagatggcacccgtggcgccggttttggtttgttgagcctc 635 ||||| ||||| ||||||| |||||| || |||||||| || |||||||| | |||||| Sbjct: 498 ttcatcgctgacagctacaaagatggtacacgtggcgcagggtttggtttactaagcctc 557 Query: 636 attggctcaataggtggtataggaggaagtattgtcgcaactgtcatggctggaagggat 695 || || || ||||||||||||| || || ||| | || || |||||||||||| || Sbjct: 558 atcggtgcagtaggtggtataggtggtagcattctagccacaatcatggctggaaatgac 617 Query: 696 tattggggatttcctggatggcggtttgcatttattgtggt 736 |||||||| || | |||||||| ||||||||||| |||| Sbjct: 618 tattggggtttggcaggatggcgtgttgcatttattatggt 658 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 249 atcctcatcaacctggcctccataatggagcgggctgatgagaatctcctccccgctgtt 308 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| || || ||| Sbjct: 262 atcctcatcaatctggcttccattatggagcgtgccgatgagaatctccttccggcagtt 321 Query: 309 tacaaggaagt 319 ||||||||||| Sbjct: 322 tacaaggaagt 332
>dbj|AK121714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079D24, full insert sequence Length = 1917 Score = 396 bits (200), Expect = e-106 Identities = 548/664 (82%) Strand = Plus / Plus Query: 904 caagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcggct 963 |||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||| | || | Sbjct: 827 caagatctgtaatgaaggtgcggacgtttcagatcatcgtcctgcaaggaataattggat 886 Query: 964 ccttgccatggactgctgttgttttcttcacaatgtggtttgagctaattggtttcgaca 1023 | |||||||||||||| | ||||||||||||||||||||||| || || ||||| |||| Sbjct: 887 cattgccatggactgccatagttttcttcacaatgtggtttgaactcatcggttttgaca 946 Query: 1024 acaaaagctcggcggggttaaacagcctgttcgccatcggctgcgcgagtggatcatttc 1083 | || |||||||||| || || |||||||| ||||| || ||||| | |||| | || | Sbjct: 947 ataacagctcggcggcattgaatagcctgtttgccattgggtgcgcaactggagctttcc 1006 Query: 1084 ttggtggagtaatcgcagaccgcgtgtcaagacgctacccagactcaggtcgcatcatgt 1143 |||| || || || ||||| ||| | || ||| || ||||| || | || |||||| Sbjct: 1007 ttggaggggtgatagcagatcgcctctcgcgacactttccagattctgcacgtgtcatgt 1066 Query: 1144 gcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacggtcatcc 1203 | ||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||| Sbjct: 1067 gtgctcagttcagtgccttcatgggcatccctttctcgtggatcctcctgacggtcatcc 1126 Query: 1204 cgcagtcggtcgactactggtacagctacgccgtcacgctgttcctgatggggctcacca 1263 |||||||||| || ||||||| | |||||||||||| || ||| | ||||| |||||| Sbjct: 1127 cgcagtcggttgattactggtccgcctacgccgtcaccctcttcttcatgggcatcacca 1186 Query: 1264 taagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctcccaagc 1323 |||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 1187 taagctggtgcgccacctctgcaaacaaccccatgtttgcggaggtagtccctcccaagc 1246 Query: 1324 accgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgctggctg 1383 |||| |||||||||||||| |||||||| || ||||||||||| ||| | |||||||| | Sbjct: 1247 accggaccatgatctacgccttcgaccgtgcattcgagggctcattcgcctcgctggcag 1306 Query: 1384 ctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacggtgaatc 1443 ||||||| |||||| |||| || ||||| | |||||||| || |||||| ||||| | Sbjct: 1307 ctcccgctgtcggcttggtcaccgagaagatatatggctatgacagcaagactgtgaacc 1366 Query: 1444 tagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgaccatgatga 1503 | ||| ||||||| | | ||| ||||| |||||||| |||||||| ||||| ||||||| Sbjct: 1367 ttgcgaacgggtcagcagaaggagcgtatgcgctctccaggggacttctgacaatgatga 1426 Query: 1504 tcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttcaagcgcg 1563 | ||||| ||||| | ||| ||| ||||||| ||| | ||| ||||||||||||| | Sbjct: 1427 ttgttcctttcggcgtctgcgtcctgttctacagccccttgtaccttgtgttcaagcgtg 1486 Query: 1564 accg 1567 |||| Sbjct: 1487 accg 1490 Score = 168 bits (85), Expect = 5e-38 Identities = 232/281 (82%) Strand = Plus / Plus Query: 456 actgtcttctgggctctatcaacaggggccgttggcgtcagccagtattttcagcaggtt 515 |||||||||||||| ||||||||||||| ||||| || |||||| |||| | ||||||| Sbjct: 379 actgtcttctgggccttatcaacaggggctgttggagttagccagcatttccggcaggtt 438 Query: 516 gcgttctggagaggtgtaaatggtgttggacttgccattgtcataccatcacttcagtcc 575 || |||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 439 gcattctggagagctgtaaatggccttggacttgctattgtaataccggcacttcagtcg 498 Query: 576 ttcattgctgatagctacagagatggcacccgtggcgccggttttggtttgttgagcctc 635 ||||| ||||| ||||||| |||||| || |||||||| || |||||||| | |||||| Sbjct: 499 ttcatcgctgacagctacaaagatggtacacgtggcgcagggtttggtttactaagcctc 558 Query: 636 attggctcaataggtggtataggaggaagtattgtcgcaactgtcatggctggaagggat 695 || || || ||||||||||||| || || ||| | || || |||||||||||| || Sbjct: 559 atcggtgcagtaggtggtataggtggtagcattctagccacaatcatggctggaaatgac 618 Query: 696 tattggggatttcctggatggcggtttgcatttattgtggt 736 |||||||| || | |||||||| ||||||||||| |||| Sbjct: 619 tattggggtttggcaggatggcgtgttgcatttattatggt 659 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 249 atcctcatcaacctggcctccataatggagcgggctgatgagaatctcctccccgctgtt 308 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| || || ||| Sbjct: 263 atcctcatcaatctggcttccattatggagcgtgccgatgagaatctccttccggcagtt 322 Query: 309 tacaaggaagt 319 ||||||||||| Sbjct: 323 tacaaggaagt 333
>dbj|AK058996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-G03, full insert sequence Length = 1574 Score = 396 bits (200), Expect = e-106 Identities = 548/664 (82%) Strand = Plus / Plus Query: 904 caagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcggct 963 |||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||| | || | Sbjct: 480 caagatctgtaatgaaggtgcggacgtttcagatcatcgtcctgcaaggaataattggat 539 Query: 964 ccttgccatggactgctgttgttttcttcacaatgtggtttgagctaattggtttcgaca 1023 | |||||||||||||| | ||||||||||||||||||||||| || || ||||| |||| Sbjct: 540 cattgccatggactgccatagttttcttcacaatgtggtttgaactcatcggttttgaca 599 Query: 1024 acaaaagctcggcggggttaaacagcctgttcgccatcggctgcgcgagtggatcatttc 1083 | || |||||||||| || || |||||||| ||||| || ||||| | |||| | || | Sbjct: 600 ataacagctcggcggcattgaatagcctgtttgccattgggtgcgcaactggagctttcc 659 Query: 1084 ttggtggagtaatcgcagaccgcgtgtcaagacgctacccagactcaggtcgcatcatgt 1143 |||| || || || ||||| ||| | || ||| || ||||| || | || |||||| Sbjct: 660 ttggaggggtgatagcagatcgcctctcgcgacactttccagattctgcacgtgtcatgt 719 Query: 1144 gcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacggtcatcc 1203 | ||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||| Sbjct: 720 gtgctcagttcagtgccttcatgggcatccctttctcgtggatcctcctgacggtcatcc 779 Query: 1204 cgcagtcggtcgactactggtacagctacgccgtcacgctgttcctgatggggctcacca 1263 |||||||||| || ||||||| | |||||||||||| || ||| | ||||| |||||| Sbjct: 780 cgcagtcggttgattactggtccgcctacgccgtcaccctcttcttcatgggcatcacca 839 Query: 1264 taagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctcccaagc 1323 |||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 840 taagctggtgcgccacctctgcaaacaaccccatgtttgcggaggtagtccctcccaagc 899 Query: 1324 accgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgctggctg 1383 |||| |||||||||||||| |||||||| || ||||||||||| ||| | |||||||| | Sbjct: 900 accggaccatgatctacgccttcgaccgtgcattcgagggctcattcgcctcgctggcag 959 Query: 1384 ctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacggtgaatc 1443 ||||||| |||||| |||| || ||||| | |||||||| || |||||| ||||| | Sbjct: 960 ctcccgctgtcggcttggtcaccgagaagatatatggctatgacagcaagactgtgaacc 1019 Query: 1444 tagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgaccatgatga 1503 | ||| ||||||| | | ||| ||||| |||||||| |||||||| ||||| ||||||| Sbjct: 1020 ttgcgaacgggtcagcagaaggagcgtatgcgctctccaggggacttctgacaatgatga 1079 Query: 1504 tcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttcaagcgcg 1563 | ||||| ||||| | ||| ||| ||||||| ||| | ||| ||||||||||||| | Sbjct: 1080 ttgttcctttcggcgtctgcgtcctgttctacagccccttgtaccttgtgttcaagcgtg 1139 Query: 1564 accg 1567 |||| Sbjct: 1140 accg 1143 Score = 168 bits (85), Expect = 5e-38 Identities = 232/281 (82%) Strand = Plus / Plus Query: 456 actgtcttctgggctctatcaacaggggccgttggcgtcagccagtattttcagcaggtt 515 |||||||||||||| ||||||||||||| ||||| || |||||| |||| | ||||||| Sbjct: 32 actgtcttctgggccttatcaacaggggctgttggagttagccagcatttccggcaggtt 91 Query: 516 gcgttctggagaggtgtaaatggtgttggacttgccattgtcataccatcacttcagtcc 575 || |||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 92 gcattctggagagctgtaaatggccttggacttgctattgtaataccggcacttcagtcg 151 Query: 576 ttcattgctgatagctacagagatggcacccgtggcgccggttttggtttgttgagcctc 635 ||||| ||||| ||||||| |||||| || |||||||| || |||||||| | |||||| Sbjct: 152 ttcatcgctgacagctacaaagatggtacacgtggcgcagggtttggtttactaagcctc 211 Query: 636 attggctcaataggtggtataggaggaagtattgtcgcaactgtcatggctggaagggat 695 || || || ||||||||||||| || || ||| | || || |||||||||||| || Sbjct: 212 atcggtgcagtaggtggtataggtggtagcattctagccacaatcatggctggaaatgac 271 Query: 696 tattggggatttcctggatggcggtttgcatttattgtggt 736 |||||||| || | |||||||| ||||||||||| |||| Sbjct: 272 tattggggtttggcaggatggcgtgttgcatttattatggt 312
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 349 bits (176), Expect = 2e-92 Identities = 410/488 (84%) Strand = Plus / Plus Query: 249 atcctcatcaacctggcctccataatggagcgggctgatgagaatctcctccccgctgtt 308 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| || || ||| Sbjct: 5914049 atcctcatcaatctggcttccattatggagcgtgccgatgagaatctccttccggcagtt 5914108 Query: 309 tacaaggaagtcagtgccgccttcgatgctggtcctactgatctggggtaccttaccttt 368 ||||||||||||||||| || ||| ||||||||||| |||||||||| |||||||| ||| Sbjct: 5914109 tacaaggaagtcagtgcagcgttcaatgctggtcctgctgatctgggataccttacattt 5914168 Query: 369 ataatgaactttctgaagtccatagcatctcccttggcaggtgtccttgctcttcagtat 428 ||||||||||||||||||| ||||||||||||||||||||| |||| | ||||| ||| Sbjct: 5914169 ctaatgaactttctgaagtcgatagcatctcccttggcaggtatcctctcccttcactat 5914228 Query: 429 gaccgccccactattcttgccatcggaactgtcttctgggctctatcaacaggggccgtt 488 || ||||| || | ||||| || || |||||||||||||| ||||||||||||| ||| Sbjct: 5914229 gatcgcccaacagtgcttgcaatagggactgtcttctgggccttatcaacaggggctgtt 5914288 Query: 489 ggcgtcagccagtattttcagcaggttgcgttctggagaggtgtaaatggtgttggactt 548 || || |||||| |||| | ||||||||| |||||||||| ||||||||| |||||||| Sbjct: 5914289 ggagttagccagcatttccggcaggttgcattctggagagctgtaaatggccttggactt 5914348 Query: 549 gccattgtcataccatcacttcagtccttcattgctgatagctacagagatggcacccgt 608 || ||||| ||||| |||||||||| ||||| ||||| ||||||| |||||| || ||| Sbjct: 5914349 gctattgtaataccggcacttcagtcgttcatcgctgacagctacaaagatggtacacgt 5914408 Query: 609 ggcgccggttttggtttgttgagcctcattggctcaataggtggtataggaggaagtatt 668 ||||| || |||||||| | |||||||| || || ||||||||||||| || || ||| Sbjct: 5914409 ggcgcagggtttggtttactaagcctcatcggtgcagtaggtggtataggtggtagcatt 5914468 Query: 669 gtcgcaactgtcatggctggaagggattattggggatttcctggatggcggtttgcattt 728 | || || |||||||||||| || |||||||| || | |||||||| |||||||| Sbjct: 5914469 ctagccacaatcatggctggaaatgactattggggtttggcaggatggcgtgttgcattt 5914528 Query: 729 attgtggt 736 ||| |||| Sbjct: 5914529 attatggt 5914536 Score = 313 bits (158), Expect = 1e-81 Identities = 362/430 (84%) Strand = Plus / Plus Query: 1138 tcatgtgcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacgg 1197 ||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||| |||| Sbjct: 5915649 tcatgtgtgctcagttcagtgccttcatgggcatccctttctcgtggatcctcctgacgg 5915708 Query: 1198 tcatcccgcagtcggtcgactactggtacagctacgccgtcacgctgttcctgatggggc 1257 |||||||||||||||| || ||||||| | |||||||||||| || ||| | ||||| Sbjct: 5915709 tcatcccgcagtcggttgattactggtccgcctacgccgtcaccctcttcttcatgggca 5915768 Query: 1258 tcaccataagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctc 1317 |||||||||||||||||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 5915769 tcaccataagctggtgcgccacctctgcaaacaaccccatgtttgcggaggtagtccctc 5915828 Query: 1318 ccaagcaccgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgc 1377 |||||||||| |||||||||||||| |||||||| || ||||||||||| ||| | |||| Sbjct: 5915829 ccaagcaccggaccatgatctacgccttcgaccgtgcattcgagggctcattcgcctcgc 5915888 Query: 1378 tggctgctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacgg 1437 |||| |||||||| |||||| |||| || ||||| | |||||||| || |||||| | Sbjct: 5915889 tggcagctcccgctgtcggcttggtcaccgagaagatatatggctatgacagcaagactg 5915948 Query: 1438 tgaatctagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgacca 1497 |||| || ||| ||||||| | | ||| ||||| |||||||| |||||||| ||||| | Sbjct: 5915949 tgaaccttgcgaacgggtcagcagaaggagcgtatgcgctctccaggggacttctgacaa 5916008 Query: 1498 tgatgatcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttca 1557 ||||||| ||||| ||||| | ||| ||| ||||||| ||| | ||| ||||||||| Sbjct: 5916009 tgatgattgttcctttcggcgtctgcgtcctgttctacagccccttgtaccttgtgttca 5916068 Query: 1558 agcgcgaccg 1567 |||| ||||| Sbjct: 5916069 agcgtgaccg 5916078 Score = 109 bits (55), Expect = 4e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 904 caagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcggct 963 |||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||| | || | Sbjct: 5915329 caagatctgtaatgaaggtgcggacgtttcagatcatcgtcctgcaaggaataattggat 5915388 Query: 964 ccttgccatggactgctgttgttttcttcacaatgtggtttga 1006 | |||||||||||||| | ||||||||||||||||||||||| Sbjct: 5915389 cattgccatggactgccatagttttcttcacaatgtggtttga 5915431
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 349 bits (176), Expect = 2e-92 Identities = 410/488 (84%) Strand = Plus / Plus Query: 249 atcctcatcaacctggcctccataatggagcgggctgatgagaatctcctccccgctgtt 308 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| || || ||| Sbjct: 56497 atcctcatcaatctggcttccattatggagcgtgccgatgagaatctccttccggcagtt 56556 Query: 309 tacaaggaagtcagtgccgccttcgatgctggtcctactgatctggggtaccttaccttt 368 ||||||||||||||||| || ||| ||||||||||| |||||||||| |||||||| ||| Sbjct: 56557 tacaaggaagtcagtgcagcgttcaatgctggtcctgctgatctgggataccttacattt 56616 Query: 369 ataatgaactttctgaagtccatagcatctcccttggcaggtgtccttgctcttcagtat 428 ||||||||||||||||||| ||||||||||||||||||||| |||| | ||||| ||| Sbjct: 56617 ctaatgaactttctgaagtcgatagcatctcccttggcaggtatcctctcccttcactat 56676 Query: 429 gaccgccccactattcttgccatcggaactgtcttctgggctctatcaacaggggccgtt 488 || ||||| || | ||||| || || |||||||||||||| ||||||||||||| ||| Sbjct: 56677 gatcgcccaacagtgcttgcaatagggactgtcttctgggccttatcaacaggggctgtt 56736 Query: 489 ggcgtcagccagtattttcagcaggttgcgttctggagaggtgtaaatggtgttggactt 548 || || |||||| |||| | ||||||||| |||||||||| ||||||||| |||||||| Sbjct: 56737 ggagttagccagcatttccggcaggttgcattctggagagctgtaaatggccttggactt 56796 Query: 549 gccattgtcataccatcacttcagtccttcattgctgatagctacagagatggcacccgt 608 || ||||| ||||| |||||||||| ||||| ||||| ||||||| |||||| || ||| Sbjct: 56797 gctattgtaataccggcacttcagtcgttcatcgctgacagctacaaagatggtacacgt 56856 Query: 609 ggcgccggttttggtttgttgagcctcattggctcaataggtggtataggaggaagtatt 668 ||||| || |||||||| | |||||||| || || ||||||||||||| || || ||| Sbjct: 56857 ggcgcagggtttggtttactaagcctcatcggtgcagtaggtggtataggtggtagcatt 56916 Query: 669 gtcgcaactgtcatggctggaagggattattggggatttcctggatggcggtttgcattt 728 | || || |||||||||||| || |||||||| || | |||||||| |||||||| Sbjct: 56917 ctagccacaatcatggctggaaatgactattggggtttggcaggatggcgtgttgcattt 56976 Query: 729 attgtggt 736 ||| |||| Sbjct: 56977 attatggt 56984 Score = 313 bits (158), Expect = 1e-81 Identities = 362/430 (84%) Strand = Plus / Plus Query: 1138 tcatgtgcgctcagttcagcgccttcatgggcatccctttcacatggatcctcctcacgg 1197 ||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||| |||| Sbjct: 58097 tcatgtgtgctcagttcagtgccttcatgggcatccctttctcgtggatcctcctgacgg 58156 Query: 1198 tcatcccgcagtcggtcgactactggtacagctacgccgtcacgctgttcctgatggggc 1257 |||||||||||||||| || ||||||| | |||||||||||| || ||| | ||||| Sbjct: 58157 tcatcccgcagtcggttgattactggtccgcctacgccgtcaccctcttcttcatgggca 58216 Query: 1258 tcaccataagctggtgcgccacctgcgccaacaacccgatgttcgcggaggtggtccctc 1317 |||||||||||||||||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 58217 tcaccataagctggtgcgccacctctgcaaacaaccccatgtttgcggaggtagtccctc 58276 Query: 1318 ccaagcaccgcaccatgatctacgcattcgaccgcgcgttcgagggctccttctcgtcgc 1377 |||||||||| |||||||||||||| |||||||| || ||||||||||| ||| | |||| Sbjct: 58277 ccaagcaccggaccatgatctacgccttcgaccgtgcattcgagggctcattcgcctcgc 58336 Query: 1378 tggctgctcccgccgtcggcatggtgacagagaaagtctatggctacaacgccaagacgg 1437 |||| |||||||| |||||| |||| || ||||| | |||||||| || |||||| | Sbjct: 58337 tggcagctcccgctgtcggcttggtcaccgagaagatatatggctatgacagcaagactg 58396 Query: 1438 tgaatctagcggacgggtcggtggcaggggcgtacgcgctctcaaggggactgctgacca 1497 |||| || ||| ||||||| | | ||| ||||| |||||||| |||||||| ||||| | Sbjct: 58397 tgaaccttgcgaacgggtcagcagaaggagcgtatgcgctctccaggggacttctgacaa 58456 Query: 1498 tgatgatcgttcccttcggtctgtgctgcctcttctacaccccactctactttgtgttca 1557 ||||||| ||||| ||||| | ||| ||| ||||||| ||| | ||| ||||||||| Sbjct: 58457 tgatgattgttcctttcggcgtctgcgtcctgttctacagccccttgtaccttgtgttca 58516 Query: 1558 agcgcgaccg 1567 |||| ||||| Sbjct: 58517 agcgtgaccg 58526 Score = 109 bits (55), Expect = 4e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 904 caagatctgtcatgaaagtgcggacatttcaaatcatcgtcctgcaaggcatagtcggct 963 |||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||| | || | Sbjct: 57777 caagatctgtaatgaaggtgcggacgtttcagatcatcgtcctgcaaggaataattggat 57836 Query: 964 ccttgccatggactgctgttgttttcttcacaatgtggtttga 1006 | |||||||||||||| | ||||||||||||||||||||||| Sbjct: 57837 cattgccatggactgccatagttttcttcacaatgtggtttga 57879
>ref|NM_119843.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter/ transporter (AT4G36790) mRNA, complete cds Length = 1725 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 700 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 759 Query: 685 ctgg 688 |||| Sbjct: 760 ctgg 763 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggtttcga 1021 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1026 gttttctttacaatgtggtttgagcttattggcttcga 1063
>gb|AY122924.1| Arabidopsis thaliana unknown protein (At4g36790) mRNA, complete cds Length = 1501 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 512 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 571 Query: 685 ctgg 688 |||| Sbjct: 572 ctgg 575 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggtttcga 1021 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 838 gttttctttacaatgtggtttgagcttattggcttcga 875
>gb|AY063899.1| Arabidopsis thaliana unknown protein (At4g36790) mRNA, complete cds Length = 1643 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 599 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 658 Query: 685 ctgg 688 |||| Sbjct: 659 ctgg 662 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggtttcga 1021 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 925 gttttctttacaatgtggtttgagcttattggcttcga 962
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 32250 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 32191 Query: 685 ctgg 688 |||| Sbjct: 32190 ctgg 32187 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Minus Query: 984 gttttcttcacaatgtggtttgagctaattggt 1016 |||||||| ||||||||||||||||| |||||| Sbjct: 31842 gttttctttacaatgtggtttgagcttattggt 31810
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 24728 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 24787 Query: 685 ctgg 688 |||| Sbjct: 24788 ctgg 24791 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggt 1016 |||||||| ||||||||||||||||| |||||| Sbjct: 25136 gttttctttacaatgtggtttgagcttattggt 25168
>emb|BX828097.1|CNS0A31Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1528 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 568 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 627 Query: 685 ctgg 688 |||| Sbjct: 628 ctgg 631 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggtttcga 1021 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 895 gttttctttacaatgtggtttgagcttattggcttcga 932
>emb|BX827767.1|CNS0A2ZM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1580 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 617 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 676 Query: 685 ctgg 688 |||| Sbjct: 677 ctgg 680 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggtttcga 1021 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 943 gttttctttacaatgtggtttgagcttattggcttcga 980
>emb|BX826852.1|CNS0A356 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1355 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 625 tgttgagcctcattggctcaataggtggtataggaggaagtattgtcgcaactgtcatgg 684 |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| |||| Sbjct: 309 tgttgaacctcattggtacaatcggtggtataggaggaggtgttgtagcaactgttatgg 368 Query: 685 ctgg 688 |||| Sbjct: 369 ctgg 372 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 984 gttttcttcacaatgtggtttgagctaattggtttcga 1021 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 635 gttttctttacaatgtggtttgagcttattggcttcga 672
>emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a22, COMPLETE SEQUENCE Length = 121881 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Minus Query: 1128 tcaggtcgcatcatgtgcgctcagttcagcgccttcatgggcatccctttcacatgg 1184 |||||||| ||||||||||| || ||||||||||| |||||||| || ||| ||||| Sbjct: 83989 tcaggtcgtatcatgtgcgcgcaattcagcgcctttatgggcattccattctcatgg 83933 Score = 48.1 bits (24), Expect = 0.12 Identities = 42/48 (87%) Strand = Plus / Minus Query: 969 ccatggactgctgttgttttcttcacaatgtggtttgagctaattggt 1016 ||||||||||| | || ||||||||||||||||| || ||||||||| Sbjct: 84799 ccatggactgccatggtcttcttcacaatgtggttcgaactaattggt 84752
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1049 cctgttcgccatcggctgcgcg 1070 |||||||||||||||||||||| Sbjct: 1804292 cctgttcgccatcggctgcgcg 1804271
>gb|AC155724.8| Mus musculus 6 BAC RP24-132K20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196715 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1907 gttcttagaaatttttgttttctttt 1932 |||||||||||||||| ||||||||| Sbjct: 22168 gttcttagaaatttttcttttctttt 22143
>gb|AC155727.6| Mus musculus 6 BAC RP24-194N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199400 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1907 gttcttagaaatttttgttttctttt 1932 |||||||||||||||| ||||||||| Sbjct: 15412 gttcttagaaatttttcttttctttt 15437
>gb|AC115935.9| Mus musculus chromosome 3, clone RP24-545D23, complete sequence Length = 145137 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1949 aactgaattttaaatttttaga 1970 |||||||||||||||||||||| Sbjct: 112131 aactgaattttaaatttttaga 112110
>emb|CR774183.10| Zebrafish DNA sequence from clone CH211-190A18 in linkage group 23, complete sequence Length = 133334 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 ggggaagaaagatgatttatg 231 ||||||||||||||||||||| Sbjct: 29214 ggggaagaaagatgatttatg 29194
>gb|DQ459477.1| Lactobacillus casei plasmid pR7.3 Rep (rep) gene, partial cds Length = 682 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 gtccttcattgctgatagcta 592 ||||||||||||||||||||| Sbjct: 114 gtccttcattgctgatagcta 94
>ref|XM_602976.2| PREDICTED: Bos taurus similar to Complement C1q tumor necrosis factor-related protein 8 precursor (LOC524646), mRNA Length = 1092 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1552 tgttcaagcgcgaccgcgacaacgc 1576 ||||| ||||||||||||||||||| Sbjct: 995 tgttccagcgcgaccgcgacaacgc 1019
>gb|AC102458.8| Mus musculus chromosome 1, clone RP24-312N11, complete sequence Length = 167263 Score = 42.1 bits (21), Expect = 7.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 tgagaatctcctccccgctgtttacaagg 315 ||||||||||||||| |||| |||||||| Sbjct: 153743 tgagaatctcctcccagctgcttacaagg 153771
>gb|AC149481.1| Populus trichocarpa clone Pop1-16J18, complete sequence Length = 120131 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 tattgaatgcttccctggtca 195 ||||||||||||||||||||| Sbjct: 115856 tattgaatgcttccctggtca 115876
>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192392 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 495 agccagtattttcagcaggtt 515 ||||||||||||||||||||| Sbjct: 98669 agccagtattttcagcaggtt 98649
>gb|AC164411.4| Mus musculus chromosome 1, clone RP23-60E6, complete sequence Length = 228155 Score = 42.1 bits (21), Expect = 7.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 tgagaatctcctccccgctgtttacaagg 315 ||||||||||||||| |||| |||||||| Sbjct: 102053 tgagaatctcctcccagctgcttacaagg 102081
>gb|AC110164.26| Mus musculus chromosome 3, clone RP23-167C5, complete sequence Length = 199235 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ttctccatctcccttatcctc 254 ||||||||||||||||||||| Sbjct: 114915 ttctccatctcccttatcctc 114895
>gb|AC146484.3| Pan troglodytes BAC clone CH251-454A18 from Y, complete sequence Length = 205077 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 cttctttcaggggaagaaaga 222 ||||||||||||||||||||| Sbjct: 30928 cttctttcaggggaagaaaga 30948
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 tttataatgaactttctgaag 386 ||||||||||||||||||||| Sbjct: 151496 tttataatgaactttctgaag 151476
>gb|AC113322.7| Mus musculus chromosome 3, clone RP23-446O11, complete sequence Length = 209697 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1402 tgacagagaaagtctatggct 1422 ||||||||||||||||||||| Sbjct: 87300 tgacagagaaagtctatggct 87280
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1911 ttagaaatttttgttttcttt 1931 ||||||||||||||||||||| Sbjct: 820526 ttagaaatttttgttttcttt 820506
>gb|AC163276.4| Mus musculus chromosome 19, clone RP24-316F20, complete sequence Length = 169300 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 tttataatgaactttctgaag 386 ||||||||||||||||||||| Sbjct: 104541 tttataatgaactttctgaag 104561
>gb|BC036122.1| Homo sapiens cDNA clone MGC:33991 IMAGE:5311838, complete cds Length = 3001 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1886 tcaataaatggcagctgtcat 1906 ||||||||||||||||||||| Sbjct: 2424 tcaataaatggcagctgtcat 2444
>gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosome 7, complete sequence Length = 221679 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 868 ctccactgtccatctggaagg 888 ||||||||||||||||||||| Sbjct: 142769 ctccactgtccatctggaagg 142789
>gb|AC016883.14| Homo sapiens chromosome 8, clone RP11-327N12, complete sequence Length = 180682 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1948 gaactgaattttaaattttta 1968 ||||||||||||||||||||| Sbjct: 94941 gaactgaattttaaattttta 94961
>gb|AC099568.3| Homo sapiens chromosome 1 clone RP5-943J3, complete sequence Length = 116470 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1886 tcaataaatggcagctgtcat 1906 ||||||||||||||||||||| Sbjct: 53730 tcaataaatggcagctgtcat 53750
>gb|AC084361.19| Homo sapiens 12 BAC RP11-364C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172853 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1886 tcaataaatggcagctgtcat 1906 ||||||||||||||||||||| Sbjct: 79571 tcaataaatggcagctgtcat 79551
>ref|XM_816286.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511173.100) partial mRNA Length = 1245 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 650 tggtataggaggaagtattgtcgca 674 |||| |||||||||||||||||||| Sbjct: 327 tggtttaggaggaagtattgtcgca 351
>ref|XM_807249.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506703.140) partial mRNA Length = 1239 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 650 tggtataggaggaagtattgtcgca 674 |||| |||||||||||||||||||| Sbjct: 324 tggtttaggaggaagtattgtcgca 348
>ref|XM_807244.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506703.20) partial mRNA Length = 1242 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 650 tggtataggaggaagtattgtcgca 674 |||| |||||||||||||||||||| Sbjct: 324 tggtttaggaggaagtattgtcgca 348
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1948 gaactgaattttaaattttta 1968 ||||||||||||||||||||| Sbjct: 5791362 gaactgaattttaaattttta 5791382
>emb|Z95152.1|HS179N16 Human DNA sequence from clone RP1-179N16 on chromosome 6p21.1-21.33 Contains the MAPK13 and MAPK14 genes for mitogen-activated protein kinase 13 and 14 , a nudix type 5 motif (nudt5) pseudogene, the 5' end of the SLC26A8 gene for solute carrier family 26 member 8 and two CpG islands, complete sequence Length = 172048 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 971 atggactgctgttgttttctt 991 ||||||||||||||||||||| Sbjct: 153417 atggactgctgttgttttctt 153397
>gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, complete sequence Length = 185182 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1886 tcaataaatggcagctgtcat 1906 ||||||||||||||||||||| Sbjct: 165790 tcaataaatggcagctgtcat 165810
>emb|AL354681.8| Human DNA sequence from clone RP11-534L20 on chromosome 1 Contains the IKBKE gene for inhibitor of kappa light polypeptide gene enhancer in B-cells kinase epsilon, a novel gene, the 5' end of the RASSF5 gene for Ras association (RalGDS/AF-6) domain family 5, a ribosomal protein L7a (RPL7A) pseudogene and a CpG island, complete sequence Length = 107689 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1886 tcaataaatggcagctgtcat 1906 ||||||||||||||||||||| Sbjct: 60535 tcaataaatggcagctgtcat 60515
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 gctggtgcgccacctgcgcca 1287 ||||||||||||||||||||| Sbjct: 2920309 gctggtgcgccacctgcgcca 2920329
>emb|CR942276.1| Human DNA sequence from clone XX-NCIH2171_5AM21, complete sequence Length = 110743 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1948 gaactgaattttaaattttta 1968 ||||||||||||||||||||| Sbjct: 31618 gaactgaattttaaattttta 31598 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1948 gaactgaattttaaattttta 1968 ||||||||||||||||||||| Sbjct: 79648 gaactgaattttaaattttta 79668
>emb|AL929414.5| Mouse DNA sequence from clone RP23-222A19 on chromosome 11, complete sequence Length = 153928 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 attgctgatagctacagagat 599 ||||||||||||||||||||| Sbjct: 134728 attgctgatagctacagagat 134708
>gb|AC012068.5|AC012068 Homo sapiens BAC clone RP11-196J6 from Y, complete sequence Length = 166516 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 cttctttcaggggaagaaaga 222 ||||||||||||||||||||| Sbjct: 111994 cttctttcaggggaagaaaga 111974
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1948 gaactgaattttaaattttta 1968 ||||||||||||||||||||| Sbjct: 87567 gaactgaattttaaattttta 87587
>dbj|BS000561.1| Pan troglodytes chromosome Y clone:PTB-495J17, complete sequences Length = 130326 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 cttctttcaggggaagaaaga 222 ||||||||||||||||||||| Sbjct: 65183 cttctttcaggggaagaaaga 65163
>gb|AC022078.12|AC022078 Homo sapiens 12p BAC RP11-498P8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169416 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1947 tgaactgaattttaaattttt 1967 ||||||||||||||||||||| Sbjct: 11756 tgaactgaattttaaattttt 11776
>emb|BX323547.4| Zebrafish DNA sequence from clone CH211-266N13 in linkage group 16, complete sequence Length = 96492 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1942 aatcctgaactgaattttaaa 1962 ||||||||||||||||||||| Sbjct: 78820 aatcctgaactgaattttaaa 78840
>ref|XM_318484.2| Anopheles gambiae str. PEST ENSANGP00000014389 (ENSANGG00000002339), partial mRNA Length = 3162 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1280 ctgcgccaacaacccgatgtt 1300 ||||||||||||||||||||| Sbjct: 2886 ctgcgccaacaacccgatgtt 2906
>dbj|AP005662.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1205G3, complete sequence Length = 108147 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1948 gaactgaattttaaattttta 1968 ||||||||||||||||||||| Sbjct: 93329 gaactgaattttaaattttta 93349
>emb|BX005042.5| Zebrafish DNA sequence from clone CH211-119F9 in linkage group 2, complete sequence Length = 173926 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cttccagcatgagaaatatcc 135 ||||||||||||||||||||| Sbjct: 99310 cttccagcatgagaaatatcc 99330
>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete sequence Length = 187252 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1728 tcttcagacagacagatgaaa 1748 ||||||||||||||||||||| Sbjct: 72707 tcttcagacagacagatgaaa 72727 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 363,549,985 Number of extensions: 20632245 Number of successful extensions: 122895 Number of sequences better than 10.0: 59 Number of HSP's gapped: 122875 Number of HSP's successfully gapped: 89 Length of query: 2010 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1987 Effective length of database: 18,503,978,556 Effective search space: 36767405390772 Effective search space used: 36767405390772 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)