| Clone Name | FLbaf66h21 |
|---|---|
| Clone Library Name | barley_pub |
>Q39057:CONS_ARATH Zinc finger protein CONSTANS - Arabidopsis thaliana (Mouse-ear cress)| Length = 373 Score = 55.5 bits (132), Expect = 6e-07 Identities = 24/56 (42%), Positives = 40/56 (71%) Frame = +2 Query: 938 RLVTISDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMD 1105 +++T++ L +R+ ++ RYR+K+ R F + I+YA RKA A+ +PRV GRFAK + Sbjct: 294 QMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
>Q940T9:COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 - Arabidopsis thaliana (Mouse-ear| cress) Length = 362 Score = 55.5 bits (132), Expect = 6e-07 Identities = 25/50 (50%), Positives = 36/50 (72%) Frame = +2 Query: 959 LKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDD 1108 L S ER+ ++ RYR+K+ R F + I+YA RKA A+ +PR++GRFAK D Sbjct: 290 LTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339
>Q9LJ44:COL12_ARATH Putative zinc finger protein CONSTANS-LIKE 12 - Arabidopsis thaliana| (Mouse-ear cress) Length = 337 Score = 55.5 bits (132), Expect = 6e-07 Identities = 24/47 (51%), Positives = 36/47 (76%) Frame = +2 Query: 968 EERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDD 1108 + R + RY++KK+KR+FG++I+YA RKA AD++ RV+GRF K D Sbjct: 278 QARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGD 324
>Q689G8:PRR37_ORYSA Two-component response regulator-like PRR37 - Oryza sativa (Rice)| Length = 742 Score = 55.1 bits (131), Expect = 8e-07 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%) Frame = +2 Query: 743 SSGCLNSADWMNGS-----AARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLGANNTPRPG 907 +SG N ++ NGS A RPN +I N N + G Sbjct: 621 NSGSNNGSNGQNGSTTAVNAERPNM---------------------EIANGTINKSGPGG 659 Query: 908 IAGNMHASGERLVTISDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRG 1087 G+ SG + + E R + ++R+K+ +RNFG+K++Y RK LA+ +PRVRG Sbjct: 660 GNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRG 719 Query: 1088 RFAKMDDGDMLKPRK*DGHGRPPAA 1162 +F + ++ ++ G GR AA Sbjct: 720 QFVR----QAVQDQQQQGGGREAAA 740
>O50055:COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 55.1 bits (131), Expect = 8e-07 Identities = 25/52 (48%), Positives = 36/52 (69%) Frame = +2 Query: 959 LKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDDGD 1114 L +R+ ++ RYR+KK R F + I+YA RKA A+ +PR++GRFAK D D Sbjct: 281 LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVD 332
>Q96502:COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 347 Score = 54.7 bits (130), Expect = 1e-06 Identities = 26/57 (45%), Positives = 37/57 (64%) Frame = +2 Query: 929 SGERLVTISDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 SG + L ER+ ++ RYR+KK R F + I+YA RKA A+ +PR++GRFAK Sbjct: 263 SGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>Q9SK53:COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 294 Score = 53.5 bits (127), Expect = 2e-06 Identities = 24/50 (48%), Positives = 35/50 (70%) Frame = +2 Query: 959 LKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDD 1108 L ER+ ++ RYR+K+ R F + I+YA RKA A+ +PR++GRFAK D Sbjct: 224 LSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273
>Q9FHH8:COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 52.8 bits (125), Expect = 4e-06 Identities = 23/45 (51%), Positives = 35/45 (77%) Frame = +2 Query: 965 SEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 S +R+ ++ RYR+K+ R F + I+YA RKA A+S+PR++GRFAK Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326
>O82256:COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 - Arabidopsis thaliana| (Mouse-ear cress) Length = 332 Score = 51.6 bits (122), Expect = 8e-06 Identities = 24/51 (47%), Positives = 34/51 (66%) Frame = +2 Query: 956 DLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDD 1108 ++ S ER LSRY++KK R + + I+Y RK A+S+ R+RGRFAK D Sbjct: 281 EINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331
>O23379:COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 - Arabidopsis thaliana| (Mouse-ear cress) Length = 330 Score = 51.2 bits (121), Expect = 1e-05 Identities = 23/42 (54%), Positives = 32/42 (76%) Frame = +2 Query: 974 RKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 R + RY++KK KR FG++I+YA RKA AD++ RV+GRF K Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVK 317
>Q8RWD0:COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 417 Score = 50.1 bits (118), Expect = 2e-05 Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 26/234 (11%) Frame = +2 Query: 476 LALDPVAAAISMMSG-GEDDNAIGASDMGLSEA-LYECEKELMEESAIEETISELLDVKI 649 + L+ AA + + G G D + ++GLS + +++ EK+ +EE +EE + +D+ Sbjct: 183 MELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEE-VEEIKAMSMDIFD 241 Query: 650 PMLQVED--VPGELRASSSSTVAAGECSLQKSVSSG--CLNSADWMNGSAARPNFLDFQG 817 + D VP EL S+ E + K+V S C+ N L + Sbjct: 242 DDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVK----EEEHKNVLMLR- 296 Query: 818 LDFEAAF----GLRRAYSEGD----------------IQNLGANNTPRPGIAGNMHASGE 937 L++++ G +S G+ ++N G + + + G + +SG Sbjct: 297 LNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSG- 355 Query: 938 RLVTISDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 R+ ++SRYR+K+ R F +KI+Y RK A+ +PR++GRF K Sbjct: 356 -------FGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
>Q93WK5:APRR7_ARATH Two-component response regulator-like APRR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 727 Score = 50.1 bits (118), Expect = 2e-05 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 5/145 (3%) Frame = +2 Query: 698 SSTVAAGECSLQKSVSSGCLNSADWMNGSAARPNFLDFQGLDFEAAFGLRRAYSEGDIQN 877 + T+ ++ SV+ S NG N ++ G++ G Sbjct: 592 NETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNM------------GSDNG 639 Query: 878 LGANNTPRPGIAGNMHASGERLVTISDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKA 1057 G N +G+ SG + K +R+ L+++R+K+ +R F +K++Y RK Sbjct: 640 AGKNGNGDGSGSGSGSGSGN---LADENKISQREAALTKFRQKRKERCFRKKVRYQSRKK 696 Query: 1058 LADSQPRVRGRF-----AKMDDGDM 1117 LA+ +PRVRG+F A DD D+ Sbjct: 697 LAEQRPRVRGQFVRKTAAATDDNDI 721
>Q689G4:PRR73_ORYSA Two-component response regulator-like PRR73 - Oryza sativa (Rice)| Length = 767 Score = 49.7 bits (117), Expect = 3e-05 Identities = 19/42 (45%), Positives = 33/42 (78%) Frame = +2 Query: 974 RKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 R+ L+++R+K+ RNFG+K++Y RK LA+ +PR+RG+F + Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR 753
>Q9SSE5:COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 47.8 bits (112), Expect = 1e-04 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 10/108 (9%) Frame = +2 Query: 839 GLRRAYSEGDIQNLGANNTPRPGIAGNMHASGERL---VTISDLK----SEERKQKLSRY 997 G+ S GD Q GA+++ + SGE T+ D S R + RY Sbjct: 271 GVTGESSAGDFQECGASSS--------IQLSGEPPWYPPTLQDNNACSHSVTRNNAVMRY 322 Query: 998 RKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMD---DGDMLKPRK 1132 ++KK R F ++++YA RKA AD + RV+GRF K D D L P + Sbjct: 323 KEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTR 370
>Q689G9:PRR1_ORYSJ Two-component response regulator-like PRR1 - Oryza sativa subsp.| japonica (Rice) Length = 518 Score = 47.4 bits (111), Expect = 2e-04 Identities = 20/46 (43%), Positives = 34/46 (73%) Frame = +2 Query: 962 KSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 +SE R L+++R K+ +R F +K++Y RK LA+++PRVRG+F + Sbjct: 439 RSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVR 484
>Q9LKL2:APRR1_ARATH Two-component response regulator-like APRR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 618 Score = 47.4 bits (111), Expect = 2e-04 Identities = 24/67 (35%), Positives = 44/67 (65%) Frame = +2 Query: 962 KSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDDGDMLKPRK*DG 1141 K + R++ L ++R+K+ +R F +KI+Y RK LA+ +PRV+G+F + +G + D Sbjct: 529 KLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNV-----DL 583 Query: 1142 HGRPPAA 1162 +G+P +A Sbjct: 584 NGQPDSA 590
>Q8LG76:COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 - Arabidopsis thaliana (Mouse-ear| cress) Length = 406 Score = 47.0 bits (110), Expect = 2e-04 Identities = 21/50 (42%), Positives = 33/50 (66%) Frame = +2 Query: 950 ISDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 + D R+ ++SRYR+K+ R F +KI+Y RK A+ +PR++GRF K Sbjct: 349 LGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 398
>Q9C7E8:COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 - Arabidopsis thaliana| (Mouse-ear cress) Length = 433 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = +2 Query: 908 IAGNMHASGERLVTISDLK--SEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRV 1081 IAG + + T +DL+ ++ R + RY++K+ R + + I+Y RKA AD++ RV Sbjct: 361 IAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRV 420 Query: 1082 RGRFAKMDD 1108 RGRF K + Sbjct: 421 RGRFVKASE 429
>Q689G6:PRR95_ORYSJ Two-component response regulator-like PRR95 - Oryza sativa subsp.| japonica (Rice) Length = 623 Score = 46.6 bits (109), Expect = 3e-04 Identities = 19/47 (40%), Positives = 33/47 (70%) Frame = +2 Query: 971 ERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDDG 1111 +R+ L+++R K+ R F +K++Y RK LA+ +PRV+G+F + D G Sbjct: 573 QREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDHG 619
>Q9LUA9:COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 373 Score = 46.2 bits (108), Expect = 4e-04 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%) Frame = +2 Query: 839 GLRRAYSEGDIQNLGANNT------PRPGIAGNMHASGERLVTISDLKSEERKQKLSRYR 1000 G+ + GD Q+ GA++ P+P H + + ++ S + R + RY+ Sbjct: 271 GITGESNAGDFQDCGASSMKQLSREPQPWC----HPTAQDIIASSHATT--RNNAVMRYK 324 Query: 1001 KKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMD---DGDMLKPRK 1132 +KK R F ++++Y RK AD + RV+GRF K D D + P + Sbjct: 325 EKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDPMSPTR 371
>Q9C9A9:COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 - Arabidopsis thaliana (Mouse-ear| cress) Length = 392 Score = 45.8 bits (107), Expect = 5e-04 Identities = 19/43 (44%), Positives = 31/43 (72%) Frame = +2 Query: 971 ERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 ER+ ++ RY++K+ R F +KI+Y RK A+ +PR++GRF K Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386
>O22800:COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 402 Score = 45.8 bits (107), Expect = 5e-04 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%) Frame = +2 Query: 944 VTISDLK--SEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDD 1108 VT +DL+ ++ R + RY++KK R + + I+Y RKA A+++ RV+GRF K D Sbjct: 345 VTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401
>Q9M9B3:COL8_ARATH Putative zinc finger protein CONSTANS-LIKE 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 313 Score = 45.4 bits (106), Expect = 6e-04 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = +2 Query: 971 ERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 ER+ ++ RYR K+ R F +KI+Y RK AD +PR++GRF + Sbjct: 264 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 306
>Q8L500:APRR9_ARATH Two-component response regulator-like APRR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 468 Score = 43.1 bits (100), Expect = 0.003 Identities = 18/48 (37%), Positives = 32/48 (66%) Frame = +2 Query: 971 ERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMDDGD 1114 +R+ L ++R K+ R F +K++Y RK LA+ +PRV+G+F + + D Sbjct: 416 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463
>Q9LVG4:APRR3_ARATH Two-component response regulator-like APRR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 495 Score = 42.7 bits (99), Expect = 0.004 Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Frame = +2 Query: 860 EGDIQNLGANNTPRPGIAGNMHASGERLVTISDLKSE--ERKQKLSRYRKKKIKRNFGRK 1033 E ++++ +++P + G+ +S L S +R+ L ++R K+ +R F +K Sbjct: 402 EENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKK 461 Query: 1034 IKYACRKALADSQPRVRGRFAKMDD 1108 ++Y RK LA+ +P V+G+F + D Sbjct: 462 VRYHSRKKLAEQRPHVKGQFIRKRD 486
>Q6LA42:APRR5_ARATH Two-component response regulator-like APRR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 558 Score = 42.0 bits (97), Expect = 0.007 Identities = 16/46 (34%), Positives = 33/46 (71%) Frame = +2 Query: 962 KSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAK 1099 +S +R+ L+++R K+ R + +K++Y RK LA+ +PR++G+F + Sbjct: 505 QSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVR 550
>Q9LRH6:GAT26_ARATH GATA transcription factor 26 - Arabidopsis thaliana (Mouse-ear cress)| Length = 309 Score = 39.3 bits (90), Expect = 0.044 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%) Frame = +2 Query: 971 ERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRF--AKMDDG 1111 +R Q L R+RKK+ R F +K++Y R+ +A R +G+F +KM DG Sbjct: 145 QRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDG 193
>Q8GXL7:GAT27_ARATH GATA transcription factor 27 - Arabidopsis thaliana (Mouse-ear cress)| Length = 297 Score = 36.6 bits (83), Expect = 0.28 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Frame = +2 Query: 878 LGANNTPR--PGIAGNMHASGERLV---TISDLKSEERKQKLSRYRKKKIKRNFGRKIKY 1042 LG P P G+ H + L T L +R L R+R+K+ RNF + I+Y Sbjct: 106 LGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRY 165 Query: 1043 ACRKALADSQPRVRGRF--AKMDDGD 1114 RK +A R +G+F AK + D Sbjct: 166 TVRKEVALRMQRKKGQFTSAKSSNDD 191
>Q8H1G0:GAT25_ARATH GATA transcription factor 25 - Arabidopsis thaliana (Mouse-ear cress)| Length = 302 Score = 36.2 bits (82), Expect = 0.37 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +2 Query: 971 ERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRF 1093 +R L R+R+K+ RNF +KI+Y RK +A R +G+F Sbjct: 146 QRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQF 186
>Q06511:RRP15_YEAST Ribosomal RNA-processing protein 15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 250 Score = 33.9 bits (76), Expect = 1.8 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +2 Query: 953 SDLKSEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKMD 1105 S LK+ +RK + KK +K++ K++Y +KAL + ++ G+ K D Sbjct: 112 SHLKAYDRKDPIMARNKKVLKQSESEKLEYKAKKALLAEKKKLLGKARKTD 162
>P23883:PUUC_ECOLI Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase - Escherichia| coli Length = 495 Score = 33.5 bits (75), Expect = 2.4 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%) Frame = +2 Query: 410 EYDLGAEGDLFKAPEPIVEEPLLALD-----PVAAAISMMSGGEDDNAIGASDMGLSEAL 574 EY AE + F+ +P+ + PL + + A+S G + S +A+ Sbjct: 27 EYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAV 86 Query: 575 YECEKELMEESAIEETISELLDVKIPMLQV--EDVPGELRA 691 +LME A E + E LD P+ +D+PG RA Sbjct: 87 LNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARA 127
>O68006:BACA_BACLI Bacitracin synthetase 1 - Bacillus licheniformis| Length = 5255 Score = 32.7 bits (73), Expect = 4.1 Identities = 13/49 (26%), Positives = 30/49 (61%) Frame = +2 Query: 530 DNAIGASDMGLSEALYECEKELMEESAIEETISELLDVKIPMLQVEDVP 676 + A+G + +G++ +E ++ +A+ TI + L+VK+P+ Q+ + P Sbjct: 2630 EEALGINKIGINSHFFEAGGHSLKAAALVSTIHKELNVKLPLRQIFETP 2678
>O88588:PACS1_RAT Phosphofurin acidic cluster sorting protein 1 - Rattus norvegicus| (Rat) Length = 961 Score = 31.6 bits (70), Expect = 9.1 Identities = 26/94 (27%), Positives = 42/94 (44%) Frame = +2 Query: 434 DLFKAPEPIVEEPLLALDPVAAAISMMSGGEDDNAIGASDMGLSEALYECEKELMEESAI 613 DLF EP V EP LD V + ++G A + ++EA+ C + +E + Sbjct: 689 DLFSRSEPPVSEP---LDVVGRVMQYVNG-----ATTTHQLPVAEAMLTCRHKFPDEDSY 740 Query: 614 EETISELLDVKIPMLQVEDVPGELRASSSSTVAA 715 ++ I + VK+ + VED P S V + Sbjct: 741 QKFIPFIGVVKVGL--VEDSPSTAGDGDDSPVVS 772
>Q8K212:PACS1_MOUSE Phosphofurin acidic cluster sorting protein 1 - Mus musculus| (Mouse) Length = 961 Score = 31.6 bits (70), Expect = 9.1 Identities = 26/94 (27%), Positives = 42/94 (44%) Frame = +2 Query: 434 DLFKAPEPIVEEPLLALDPVAAAISMMSGGEDDNAIGASDMGLSEALYECEKELMEESAI 613 DLF EP V EP LD V + ++G A + ++EA+ C + +E + Sbjct: 689 DLFSRSEPPVSEP---LDVVGRVMQYVNG-----ATTTHQLPVAEAMLTCRHKFPDEDSY 740 Query: 614 EETISELLDVKIPMLQVEDVPGELRASSSSTVAA 715 ++ I + VK+ + VED P S V + Sbjct: 741 QKFIPFIGVVKVGL--VEDSPSTAGDGDDSPVVS 772
>A2AJK6:CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 - Mus musculus (Mouse)| Length = 2986 Score = 31.6 bits (70), Expect = 9.1 Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 8/97 (8%) Frame = -1 Query: 1320 SPKGTDLMERAKTNSNGRGGAAQRPSP*KLLDADKPLAAQFLPCNNLVF---LMSLAAGG 1150 S K TD + A + +NG GAA P+ LP N L F L+S A G Sbjct: 2846 SEKSTDTVSAADS-ANGSVGAATAPAA--------------LPSNPLAFNPFLLSTMAPG 2890 Query: 1149 LPWPSYFL-----GLSMSPSSILANLPRTLGWLSARA 1054 L +PS FL GL++ LA L +G +A Sbjct: 2891 LFYPSMFLPPGLGGLTLPGFPALAGLQNAVGTSEEKA 2927
>Q9P2D1:CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 - Homo sapiens (Human)| Length = 2997 Score = 31.6 bits (70), Expect = 9.1 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Frame = -1 Query: 1326 KMSPKGTDLMERAKTNSNGRGGAAQRPSP*KLLDADKPLAAQFLPCNNLVF---LMSLAA 1156 K S K TD + A + +NG GAA P+ LP N L F L+S A Sbjct: 2855 KDSEKSTDAVSAADS-ANGSVGAATAPAG--------------LPSNPLAFNPFLLSTMA 2899 Query: 1155 GGLPWPSYFL-----GLSMSPSSILANLPRTLG 1072 GL +PS FL GL++ LA L +G Sbjct: 2900 PGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVG 2932 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 189,197,382 Number of extensions: 3635272 Number of successful extensions: 11957 Number of sequences better than 10.0: 36 Number of HSP's gapped: 11946 Number of HSP's successfully gapped: 36 Length of query: 499 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 382 Effective length of database: 68,593,924 Effective search space: 26202878968 Effective search space used: 26202878968 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)