| Clone Name | FLbaf69e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108482.1| Zea mays PCO148683 mRNA sequence Length = 1298 Score = 769 bits (388), Expect = 0.0 Identities = 667/760 (87%) Strand = Plus / Plus Query: 355 caatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttct 414 |||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||| || Sbjct: 205 caatgggtattctactcttttggctccaccaaatgaagtgttgattccaccagaactcct 264 Query: 415 atctagcaagactgtctggacaccagaccgagagcttgggcagtatgaggacttagtagc 474 ||||||| |||||| ||||||||||| || ||||||||||||||||| ||| | ||||| Sbjct: 265 ttctagcaggactgtgtggacaccagatcgggagcttgggcagtatgaagacctggtagc 324 Query: 475 tagagtaacaaacttccataatgaagacaacggattcatggttttggatggtgatgtttt 534 ||| || ||||||||||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 325 tagggtcacaaacttccataatgaggacaagggcttcatggttttggatggcgatgtttt 384 Query: 535 tgacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgctaaaag 594 ||| ||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 385 tgatgttccaattaggaaggacattgttcaccgagtagtaaggtggcagcttgctaaaag 444 Query: 595 gcaacaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcc 654 || ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||| Sbjct: 445 acagcaggggacacactcaactaaaactatcagtgaagttagtggcactggaagaaagcc 504 Query: 655 ttataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcg 714 ||| |||||||||||| |||| |||||| ||||||||| |||| ||| |||||||| Sbjct: 505 ttacccgcaaaaaggaaccggaaaagcacgacatggaacactgcgcggtgcccagtttcg 564 Query: 715 aggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaa 774 || |||||||| |||||||| || ||||| |||||||||||| ||||| |||||||||| Sbjct: 565 tggtggtgcaaccatgcatgggcctaaacctcgaagccatgcaatcaagctgcagaagaa 624 Query: 775 agtacgacgtctgggacttaagatagccttgtctgctagaactgctgagaggaagctctg 834 |||||| || ||||| |||||||| |||||||||||| ||||||||||| ||||||||| Sbjct: 625 agtacggcggctggggcttaagattgccttgtctgctcgaactgctgaggggaagctctt 684 Query: 835 catctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaa 894 |||||||||||| | ||||| || |||||||||||||||||||| ||||| | || | Sbjct: 685 gatctttgaggacttggaagttcctagccacaagacgaaaaacattgtgcaatacattag 744 Query: 895 gcagatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagtt 954 |||||||| || | ||||||||| |||||||||||||||||||||| ||||||||| | Sbjct: 745 acagatggatgactcaaagaaggttctgttggtggatggaggcgacattgataagaagct 804 Query: 955 aaagctggctactcaaaatcttcactacgttaatgtcattccgtcgattggcctcaatgt 1014 ||||||||| |||||||| |||||||||||||| || |||| || ||||||||||| || Sbjct: 805 aaagctggccactcaaaaccttcactacgttaacgtacttccttccattggcctcaacgt 864 Query: 1015 ctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaacagaattgt 1074 |||||| ||||| |||||||||||||| |||||||||||| ||| ||||||||||| || Sbjct: 865 ctacagtatcctccagcatgacacccttgtaatgactcgggccgctatcaacagaatcgt 924 Query: 1075 tgagcggatgcacacccccatcagccgctagcaagcaggg 1114 ||||||||||| |||||||||| ||||||||||| |||| Sbjct: 925 cgagcggatgcatacccccatcaaccgctagcaaggaggg 964
>gb|BT017691.1| Zea mays clone EL01N0444C11.c mRNA sequence Length = 1227 Score = 753 bits (380), Expect = 0.0 Identities = 659/752 (87%) Strand = Plus / Plus Query: 355 caatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttct 414 |||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||| || Sbjct: 149 caatgggtattctactcttttggctccaccaaatgaagtgttgattccaccagaactcct 208 Query: 415 atctagcaagactgtctggacaccagaccgagagcttgggcagtatgaggacttagtagc 474 ||||||| |||||| ||||||||||| || ||||||||||||||||| ||| | ||||| Sbjct: 209 ttctagcaggactgtgtggacaccagatcgggagcttgggcagtatgaagacctggtagc 268 Query: 475 tagagtaacaaacttccataatgaagacaacggattcatggttttggatggtgatgtttt 534 ||| || ||||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 269 tagggtcacaaacttccataatgaggacaagggcttcatggttttggatggtgatgtttt 328 Query: 535 tgacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgctaaaag 594 ||| ||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 329 tgatgttccaattaggaaggacattgttcaccgagtagtaaggtggcagcttgctaaaag 388 Query: 595 gcaacaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcc 654 || ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 389 acagcaggggacacactcaactaaaactatcagtgaagtgagtggcactggaagaaagcc 448 Query: 655 ttataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcg 714 ||| |||||||||||| |||| |||||| ||||||||| |||| ||| |||||||| Sbjct: 449 ttacccgcaaaaaggaaccggaaaagcacgacatggaacactgcgcggtgcccagtttcg 508 Query: 715 aggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaa 774 || |||||||| |||||||| || ||||| ||||| |||| | ||||| |||||||||| Sbjct: 509 tggtggtgcaaccatgcatgggcctaaacctcgaagtcatgaaatcaagctgcagaagaa 568 Query: 775 agtacgacgtctgggacttaagatagccttgtctgctagaactgctgagaggaagctctg 834 |||||| || ||||| |||||||| |||||||||||| ||||||||||| ||||||||| Sbjct: 569 agtacggcggctggggcttaagattgccttgtctgctcgaactgctgaggggaagctctt 628 Query: 835 catctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaa 894 |||||||||||| | ||||| || |||||||||||||||||||| ||||| | || | Sbjct: 629 gatctttgaggacttggaagttcctagccacaagacgaaaaacattgtgcaatacattag 688 Query: 895 gcagatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagtt 954 |||||||| || | ||||||||| |||||||||||||||||||||| ||||||||| | Sbjct: 689 acagatggatgactcaaagaaggttctgttggtggatggaggcgacattgataagaagct 748 Query: 955 aaagctggctactcaaaatcttcactacgttaatgtcattccgtcgattggcctcaatgt 1014 |||| |||| |||||||| |||||||||||||| || |||| || ||||||||||| || Sbjct: 749 aaagttggccactcaaaaccttcactacgttaacgtacttccttccattggcctcaacgt 808 Query: 1015 ctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaacagaattgt 1074 |||||| ||||| |||||||||||||| |||||||||||| ||| ||||||||||| || Sbjct: 809 ctacagtatcctccagcatgacacccttgtaatgactcgggccgctatcaacagaatcgt 868 Query: 1075 tgagcggatgcacacccccatcagccgctagc 1106 ||||||||||| |||||||||| |||||||| Sbjct: 869 cgagcggatgcatacccccatcaaccgctagc 900
>emb|CT832636.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106A20, full insert sequence Length = 1085 Score = 714 bits (360), Expect = 0.0 Identities = 654/752 (86%) Strand = Plus / Plus Query: 356 aatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttcta 415 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 184 aatgggtattctactcttttggctccagcaaatgaagtgctgattccacaagaacttcta 243 Query: 416 tctagcaagactgtctggacaccagaccgagagcttgggcagtatgaggacttagtagct 475 || ||||||||||| ||||| ||||| || ||||||||||||||||| ||| ||||||| Sbjct: 244 tccagcaagactgtttggactccagatcgtgagcttgggcagtatgaagacctagtagcc 303 Query: 476 agagtaacaaacttccataatgaagacaacggattcatggttttggatggtgatgttttt 535 |||||||||||||||| ||||| || || || ||||||||||| ||||||||||||||| Sbjct: 304 cgagtaacaaacttccacaatgaggataagggcttcatggttttagatggtgatgttttt 363 Query: 536 gacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgctaaaagg 595 || |||||||| ||||||||||||||||| || |||||||||||||| || |||||||| Sbjct: 364 gatgttccaatcaggaaggatattgttcatagagtagtaaggtggcaactcgctaaaaga 423 Query: 596 caacaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcct 655 || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 424 cagcagggaacacactcaactaaaactatcagtgaagtgagcggcacaggaagaaaacct 483 Query: 656 tataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcga 715 || || |||||||||||||| |||||||| ||||| ||| |||| || ||||||||| Sbjct: 484 tacaatcaaaaaggaactggcagagcacgacatggtacactgcgcggccctcagtttcgc 543 Query: 716 ggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaaa 775 || |||||||| |||||||| || ||||||||||| ||||| | ||||||||||||||| Sbjct: 544 ggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttgcagaagaaa 603 Query: 776 gtacgacgtctgggacttaagatagccttgtctgctagaactgctgagaggaagctctgc 835 ||||| |||||||||||||||||||| || |||||| |||| |||||| | ||||||| Sbjct: 604 gtacggcgtctgggacttaagatagcattatctgctcgaaccgctgagggaaagctcttg 663 Query: 836 atctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaag 895 ||||||| ||||| ||||| || ||||||||||| |||||||| |||||| | || Sbjct: 664 gtctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggc 723 Query: 896 cagatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagtta 955 |||||||| | || ||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 724 cagatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagtta 783 Query: 956 aagctggctactcaaaatcttcactacgttaatgtcattccgtcgattggcctcaatgtc 1015 ||||||||||| || ||||||||||| || ||||| |||| || |||||||| ||||| Sbjct: 784 aagctggctacccagaatcttcactatgtgaatgttcttccatccattggcctaaatgta 843 Query: 1016 tacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaacagaattgtt 1075 ||||||||||| || |||||||| || ||||||| ||| | || ||||| ||||||||| Sbjct: 844 tacagcatccttcaacatgacactcttgtaatgacgcggaatgctatcaatagaattgtt 903 Query: 1076 gagcggatgcacacccccatcagccgctagca 1107 ||||| |||||||||||||||||||||||||| Sbjct: 904 gagcgtatgcacacccccatcagccgctagca 935
>ref|NM_001074697.1| Oryza sativa (japonica cultivar-group) Os11g0585700 (Os11g0585700) mRNA, complete cds Length = 1218 Score = 714 bits (360), Expect = 0.0 Identities = 654/752 (86%) Strand = Plus / Plus Query: 356 aatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttcta 415 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 203 aatgggtattctactcttttggctccagcaaatgaagtgctgattccacaagaacttcta 262 Query: 416 tctagcaagactgtctggacaccagaccgagagcttgggcagtatgaggacttagtagct 475 || ||||||||||| ||||| ||||| || ||||||||||||||||| ||| ||||||| Sbjct: 263 tccagcaagactgtttggactccagatcgtgagcttgggcagtatgaagacctagtagcc 322 Query: 476 agagtaacaaacttccataatgaagacaacggattcatggttttggatggtgatgttttt 535 |||||||||||||||| ||||| || || || ||||||||||| ||||||||||||||| Sbjct: 323 cgagtaacaaacttccacaatgaggataagggcttcatggttttagatggtgatgttttt 382 Query: 536 gacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgctaaaagg 595 || |||||||| ||||||||||||||||| || |||||||||||||| || |||||||| Sbjct: 383 gatgttccaatcaggaaggatattgttcatagagtagtaaggtggcaactcgctaaaaga 442 Query: 596 caacaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcct 655 || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 443 cagcagggaacacactcaactaaaactatcagtgaagtgagcggcacaggaagaaaacct 502 Query: 656 tataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcga 715 || || |||||||||||||| |||||||| ||||| ||| |||| || ||||||||| Sbjct: 503 tacaatcaaaaaggaactggcagagcacgacatggtacactgcgcggccctcagtttcgc 562 Query: 716 ggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaaa 775 || |||||||| |||||||| || ||||||||||| ||||| | ||||||||||||||| Sbjct: 563 ggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttgcagaagaaa 622 Query: 776 gtacgacgtctgggacttaagatagccttgtctgctagaactgctgagaggaagctctgc 835 ||||| |||||||||||||||||||| || |||||| |||| |||||| | ||||||| Sbjct: 623 gtacggcgtctgggacttaagatagcattatctgctcgaaccgctgagggaaagctcttg 682 Query: 836 atctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaag 895 ||||||| ||||| ||||| || ||||||||||| |||||||| |||||| | || Sbjct: 683 gtctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggc 742 Query: 896 cagatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagtta 955 |||||||| | || ||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 743 cagatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagtta 802 Query: 956 aagctggctactcaaaatcttcactacgttaatgtcattccgtcgattggcctcaatgtc 1015 ||||||||||| || ||||||||||| || ||||| |||| || |||||||| ||||| Sbjct: 803 aagctggctacccagaatcttcactatgtgaatgttcttccatccattggcctaaatgta 862 Query: 1016 tacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaacagaattgtt 1075 ||||||||||| || |||||||| || ||||||| ||| | || ||||| ||||||||| Sbjct: 863 tacagcatccttcaacatgacactcttgtaatgacgcggaatgctatcaatagaattgtt 922 Query: 1076 gagcggatgcacacccccatcagccgctagca 1107 ||||| |||||||||||||||||||||||||| Sbjct: 923 gagcgtatgcacacccccatcagccgctagca 954
>dbj|AK069751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I10, full insert sequence Length = 1218 Score = 706 bits (356), Expect = 0.0 Identities = 653/752 (86%) Strand = Plus / Plus Query: 356 aatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttcta 415 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 203 aatgggtattctactcttttggctccagcaaatgaagtgctgattccacaagaacttcta 262 Query: 416 tctagcaagactgtctggacaccagaccgagagcttgggcagtatgaggacttagtagct 475 || ||||||||||| ||||| ||||| || ||||||||||||||||| ||| ||||||| Sbjct: 263 tccagcaagactgtttggactccagatcgtgagcttgggcagtatgaagacctagtagcc 322 Query: 476 agagtaacaaacttccataatgaagacaacggattcatggttttggatggtgatgttttt 535 |||||||||||||||| ||||| || || || ||||||||||| ||||||||||||||| Sbjct: 323 cgagtaacaaacttccacaatgaggataagggcttcatggttttagatggtgatgttttt 382 Query: 536 gacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgctaaaagg 595 || |||||||| ||||||||||||||||| || |||||||||||||| || |||||||| Sbjct: 383 gatgttccaatcaggaaggatattgttcatagagtagtaaggtggcaactcgctaaaaga 442 Query: 596 caacaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcct 655 || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 443 cagcagggaacacactcaactaaaactatcagtgaagtgagcggcacaggaagaaaacct 502 Query: 656 tataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcga 715 || || |||||||||||||| |||||||| ||||| ||| |||| || ||||||||| Sbjct: 503 tacaatcaaaaaggaactggcagagcacgacatggtacactgcgcggccctcagtttcgc 562 Query: 716 ggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaaa 775 || |||||||| |||||||| || ||||||||||| ||||| | ||||||||||||||| Sbjct: 563 ggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttgcagaagaaa 622 Query: 776 gtacgacgtctgggacttaagatagccttgtctgctagaactgctgagaggaagctctgc 835 ||||| |||||||||||||||||||| || |||||| |||| |||||| | ||||||| Sbjct: 623 gtacggcgtctgggacttaagatagcattatctgctcgaaccgctgagggaaagctcttg 682 Query: 836 atctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaag 895 ||||||| ||||| ||||| || ||||||||||| |||||||| |||||| | || Sbjct: 683 gtctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggc 742 Query: 896 cagatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagtta 955 |||||||| | || ||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 743 cagatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagtta 802 Query: 956 aagctggctactcaaaatcttcactacgttaatgtcattccgtcgattggcctcaatgtc 1015 ||||||||||| || ||||||||||| || ||||| |||| || |||||||| ||||| Sbjct: 803 aagctggctacccagaatcttcactatgtgaatgttcttccatccattggcctaaatgta 862 Query: 1016 tacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaacagaattgtt 1075 ||||||||||| || |||||||| || |||||| ||| | || ||||| ||||||||| Sbjct: 863 tacagcatccttcaacatgacactcttgaaatgacgcggaatgctatcaatagaattgtt 922 Query: 1076 gagcggatgcacacccccatcagccgctagca 1107 ||||| |||||||||||||||||||||||||| Sbjct: 923 gagcgtatgcacacccccatcagccgctagca 954
>ref|NM_001073321.1| Oryza sativa (japonica cultivar-group) Os12g0488600 (Os12g0488600) mRNA, complete cds Length = 867 Score = 347 bits (175), Expect = 7e-92 Identities = 392/459 (85%), Gaps = 4/459 (0%) Strand = Plus / Plus Query: 649 aaagccttataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtca 708 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 411 aaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggtcccca 470 Query: 709 gtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttgca 768 |||||| || ||||||||||||||||| || |||||||||||||||||| |||||||||| Sbjct: 471 gtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttgca 530 Query: 769 gaagaaagtacgacgtctgggacttaagatagccttgtctgctagaactgctgagaggaa 828 ||||| || || ||||||||||| ||||||||||||||||| | |||||||| |||| Sbjct: 531 aaagaaggtccgtcgtctgggactgaagatagccttgtctgcacggactgctgaagggaa 590 Query: 829 gc-tctgcatctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagc 887 || |||| ||||||||||| | ||||| || |||||||||||||| ||| | ||| ||| Sbjct: 591 gcttctg-gtctttgaggacttggaagttcctagccacaagacgaagaacgttgtg-agc 648 Query: 888 -atatcaagcagatggacgatacgaagaaggttttgttggtggatggaggcgacatcgat 946 |||| | |||||||| || || ||||| || | |||| ||||||||||| |||||| Sbjct: 649 tatataagccagatggaggacacaaagaaagtgctactggttgatggaggcgatatcgat 708 Query: 947 aagaagttaaagctggctactcaaaatcttcactacgttaatgtcattccgtcgattggc 1006 || ||| |||||||||||||||||||||| |||||||| ||||| |||| || ||||| Sbjct: 709 aaaaagctaaagctggctactcaaaatctccactacgtgaatgtgcttccttcaattgga 768 Query: 1007 ctcaatgtctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaac 1066 ||||| |||||||||||||| ||||||||||||||| |||||||||| || || | || Sbjct: 769 ctcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaat 828 Query: 1067 agaattgttgagcggatgcacacccccatcagccgctag 1105 | ||||||||||| ||||| |||||||||| ||||||| Sbjct: 829 cggattgttgagcgaatgcatacccccatcaaccgctag 867 Score = 79.8 bits (40), Expect = 3e-11 Identities = 110/132 (83%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 470 gtagctagagtaacaaacttccataatgaagacaacggattcatggttttggatggtgat 529 ||||||||| ||||||| ||| | ||||| || || || | |||||| |||||||||||| Sbjct: 262 gtagctagaataacaaatttc-acaatgaggataagggctacatggtgttggatggtgat 320 Query: 530 gtttttgacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgct 589 || ||||| |||||||| |||||||| |||||||| | || ||| | ||||| |||||| Sbjct: 321 gtatttgatgttccaatcaggaaggacattgttcatcgagttgtacgttggcaacttgct 380 Query: 590 aaaaggcaacag 601 ||| |||||||| Sbjct: 381 aaacggcaacag 392
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 157 bits (79), Expect = 1e-34 Identities = 127/143 (88%) Strand = Plus / Plus Query: 452 gggcagtatgaggacttagtagctagagtaacaaacttccataatgaagacaacggattc 511 ||||||||||| ||| ||||||| |||||||||||||||| ||||| || || || ||| Sbjct: 44933 gggcagtatgaagacctagtagcccgagtaacaaacttccacaatgaggataagggcttc 44992 Query: 512 atggttttggatggtgatgtttttgacgttccaattaggaaggatattgttcacagggta 571 |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 44993 atggttttagatggtgatgtttttgatgttccaatcaggaaggatattgttcatagagta 45052 Query: 572 gtaaggtggcagcttgctaaaag 594 ||||||||||| || |||||||| Sbjct: 45053 gtaaggtggcaactcgctaaaag 45075 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 356 aatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttcta 415 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 44522 aatgggtattctactcttttggctccagcaaatgaagtgctgattccacaagaacttcta 44581 Query: 416 tctagcaagactgtctggacaccagaccgagagcttgg 453 || ||||||||||| ||||| ||||| || |||||||| Sbjct: 44582 tccagcaagactgtttggactccagatcgtgagcttgg 44619 Score = 131 bits (66), Expect = 8e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 598 acaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcctta 657 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 45190 acagggaacacactcaactaaaactatcagtgaagtgagcggcacaggaagaaaacctta 45249 Query: 658 taagcaaaaaggaactggaagagcacgtcatggaacattgcg 699 || |||||||||||||| |||||||| ||||| ||| |||| Sbjct: 45250 caatcaaaaaggaactggcagagcacgacatggtacactgcg 45291 Score = 123 bits (62), Expect = 2e-24 Identities = 131/154 (85%) Strand = Plus / Plus Query: 837 tctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaagc 896 ||||||| ||||| ||||| || ||||||||||| |||||||| |||||| | || | Sbjct: 46317 tctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggcc 46376 Query: 897 agatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagttaa 956 ||||||| | || ||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 46377 agatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagttaa 46436 Query: 957 agctggctactcaaaatcttcactacgttaatgt 990 |||||||||| || ||||||||||| || ||||| Sbjct: 46437 agctggctacccagaatcttcactatgtgaatgt 46470 Score = 121 bits (61), Expect = 7e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 707 cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 766 |||||||| || |||||||| |||||||| || ||||||||||| ||||| | |||||| Sbjct: 45412 cagtttcgcggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttg 45471 Query: 767 cagaagaaagtacgacgtctgggacttaagatagccttgtctgctagaactgctgag 823 |||||||||||||| |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 45472 cagaagaaagtacggcgtctgggacttaagatagcattatctgctcgaaccgctgag 45528 Score = 103 bits (52), Expect = 2e-18 Identities = 91/104 (87%) Strand = Plus / Plus Query: 1004 ggcctcaatgtctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatc 1063 ||||| ||||| ||||||||||| || |||||||| || ||||||| ||| | || ||| Sbjct: 46583 ggcctaaatgtatacagcatccttcaacatgacactcttgtaatgacgcggaatgctatc 46642 Query: 1064 aacagaattgttgagcggatgcacacccccatcagccgctagca 1107 || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 46643 aatagaattgttgagcgtatgcacacccccatcagccgctagca 46686
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 157 bits (79), Expect = 1e-34 Identities = 127/143 (88%) Strand = Plus / Plus Query: 452 gggcagtatgaggacttagtagctagagtaacaaacttccataatgaagacaacggattc 511 ||||||||||| ||| ||||||| |||||||||||||||| ||||| || || || ||| Sbjct: 21287461 gggcagtatgaagacctagtagcccgagtaacaaacttccacaatgaggataagggcttc 21287520 Query: 512 atggttttggatggtgatgtttttgacgttccaattaggaaggatattgttcacagggta 571 |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 21287521 atggttttagatggtgatgtttttgatgttccaatcaggaaggatattgttcatagagta 21287580 Query: 572 gtaaggtggcagcttgctaaaag 594 ||||||||||| || |||||||| Sbjct: 21287581 gtaaggtggcaactcgctaaaag 21287603 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 356 aatgggtattctactcttttggctccagcaaatgaagcgctgattccaccggaacttcta 415 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 21287050 aatgggtattctactcttttggctccagcaaatgaagtgctgattccacaagaacttcta 21287109 Query: 416 tctagcaagactgtctggacaccagaccgagagcttgg 453 || ||||||||||| ||||| ||||| || |||||||| Sbjct: 21287110 tccagcaagactgtttggactccagatcgtgagcttgg 21287147 Score = 131 bits (66), Expect = 8e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 598 acaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcctta 657 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 21287718 acagggaacacactcaactaaaactatcagtgaagtgagcggcacaggaagaaaacctta 21287777 Query: 658 taagcaaaaaggaactggaagagcacgtcatggaacattgcg 699 || |||||||||||||| |||||||| ||||| ||| |||| Sbjct: 21287778 caatcaaaaaggaactggcagagcacgacatggtacactgcg 21287819 Score = 123 bits (62), Expect = 2e-24 Identities = 131/154 (85%) Strand = Plus / Plus Query: 837 tctttgaggacctagaagtccccagccacaagacgaaaaacatcgtgcagcatatcaagc 896 ||||||| ||||| ||||| || ||||||||||| |||||||| |||||| | || | Sbjct: 21288845 tctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggcc 21288904 Query: 897 agatggacgatacgaagaaggttttgttggtggatggaggcgacatcgataagaagttaa 956 ||||||| | || ||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21288905 agatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagttaa 21288964 Query: 957 agctggctactcaaaatcttcactacgttaatgt 990 |||||||||| || ||||||||||| || ||||| Sbjct: 21288965 agctggctacccagaatcttcactatgtgaatgt 21288998 Score = 121 bits (61), Expect = 7e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 707 cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 766 |||||||| || |||||||| |||||||| || ||||||||||| ||||| | |||||| Sbjct: 21287940 cagtttcgcggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttg 21287999 Query: 767 cagaagaaagtacgacgtctgggacttaagatagccttgtctgctagaactgctgag 823 |||||||||||||| |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 21288000 cagaagaaagtacggcgtctgggacttaagatagcattatctgctcgaaccgctgag 21288056 Score = 103 bits (52), Expect = 2e-18 Identities = 91/104 (87%) Strand = Plus / Plus Query: 1004 ggcctcaatgtctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatc 1063 ||||| ||||| ||||||||||| || |||||||| || ||||||| ||| | || ||| Sbjct: 21289111 ggcctaaatgtatacagcatccttcaacatgacactcttgtaatgacgcggaatgctatc 21289170 Query: 1064 aacagaattgttgagcggatgcacacccccatcagccgctagca 1107 || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 21289171 aatagaattgttgagcgtatgcacacccccatcagccgctagca 21289214
>gb|BT012933.1| Lycopersicon esculentum clone 114096R, mRNA sequence Length = 1349 Score = 137 bits (69), Expect = 1e-28 Identities = 231/285 (81%) Strand = Plus / Plus Query: 478 agtaacaaacttccataatgaagacaacggattcatggttttggatggtgatgtttttga 537 ||||||||||||| ||||||||||||| || || ||| ||||| ||||||||| ||||| Sbjct: 441 agtaacaaacttcaataatgaagacaagggctttatgtgtttggctggtgatgtctttga 500 Query: 538 cgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgctaaaaggca 597 || ||||| ||||| |||||| |||| |||| || || ||||||||||| ||| |||| Sbjct: 501 tgtgccaatcaggaaagatattattcatcgggttgtgagatggcagcttgcaaaacggca 560 Query: 598 acaggggacacactcaaccaaaactatcagtgaagtgagcggcacaggaagaaagcctta 657 |||||||| || ||||| |||||||| |||||||| || || || || ||||| || | Sbjct: 561 gcaggggacccattcaactaaaactattagtgaagttagtgggactggtagaaaaccgtg 620 Query: 658 taagcaaaaaggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcgagg 717 || || || || || || |||| | ||||||||| |||||||| |||||||||||| Sbjct: 621 gaatcagaagggcacagggcgagcgaggcatggaacactgcgtggtcctcagtttcgagg 680 Query: 718 aggtgcaactatgcatggcccgaaaccacgaagccatgcattcaa 762 ||||| ||||||||||| || ||||| ||||| |||||| |||| Sbjct: 681 tggtgccactatgcatggtccaaaaccgcgaagtcatgcaatcaa 725
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 707 cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 766 |||||||| || ||||||||||||||||| || |||||||||||||||||| |||||||| Sbjct: 18345327 cagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttg 18345386 Query: 767 cagaagaaagtacgacgtctgggacttaagatagccttgtctgc 810 || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 18345387 caaaagaaggtccgtcgtctgggactgaagatagccttgtctgc 18345430 Score = 101 bits (51), Expect = 7e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 649 aaagccttataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 703 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18345160 aaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 18345214 Score = 87.7 bits (44), Expect = 1e-13 Identities = 86/100 (86%) Strand = Plus / Plus Query: 1007 ctcaatgtctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaac 1066 ||||| |||||||||||||| ||||||||||||||| |||||||||| || || | || Sbjct: 18346427 ctcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaat 18346486 Query: 1067 agaattgttgagcggatgcacacccccatcagccgctagc 1106 | ||||||||||| ||||| |||||||||| |||||||| Sbjct: 18346487 cggattgttgagcgaatgcatacccccatcaaccgctagc 18346526 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 924 tggtggatggaggcgacatcgataagaagttaaagctggctactcaaaatcttcactacg 983 |||| ||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||| Sbjct: 18346206 tggttgatggaggcgatatcgataaaaagctaaagctggctactcaaaatctccactacg 18346265 Query: 984 ttaatgt 990 | ||||| Sbjct: 18346266 tgaatgt 18346272 Score = 81.8 bits (41), Expect = 6e-12 Identities = 111/133 (83%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 470 gtagctagagtaacaaacttccataatgaagacaacggattcatggttttggatggtgat 529 ||||||||| ||||||| ||| | ||||| || || || | |||||| |||||||||||| Sbjct: 18344250 gtagctagaataacaaatttc-acaatgaggataagggctacatggtgttggatggtgat 18344308 Query: 530 gtttttgacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgct 589 || ||||| |||||||| |||||||| |||||||| | || ||| | ||||| |||||| Sbjct: 18344309 gtatttgatgttccaatcaggaaggacattgttcatcgagttgtacgttggcaacttgct 18344368 Query: 590 aaaaggcaacagg 602 ||| ||||||||| Sbjct: 18344369 aaacggcaacagg 18344381
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Minus Query: 707 cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 766 |||||||| || ||||||||||||||||| || |||||||||||||||||| |||||||| Sbjct: 25667 cagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttg 25608 Query: 767 cagaagaaagtacgacgtctgggacttaagatagccttgtctgc 810 || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 25607 caaaagaaggtccgtcgtctgggactgaagatagccttgtctgc 25564 Score = 101 bits (51), Expect = 7e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 649 aaagccttataagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 703 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25834 aaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 25780 Score = 87.7 bits (44), Expect = 1e-13 Identities = 86/100 (86%) Strand = Plus / Minus Query: 1007 ctcaatgtctacagcatcctgcagcatgacaccctcataatgactcgggacgcaatcaac 1066 ||||| |||||||||||||| ||||||||||||||| |||||||||| || || | || Sbjct: 24567 ctcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaat 24508 Query: 1067 agaattgttgagcggatgcacacccccatcagccgctagc 1106 | ||||||||||| ||||| |||||||||| |||||||| Sbjct: 24507 cggattgttgagcgaatgcatacccccatcaaccgctagc 24468 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 924 tggtggatggaggcgacatcgataagaagttaaagctggctactcaaaatcttcactacg 983 |||| ||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||| Sbjct: 24788 tggttgatggaggcgatatcgataaaaagctaaagctggctactcaaaatctccactacg 24729 Query: 984 ttaatgt 990 | ||||| Sbjct: 24728 tgaatgt 24722 Score = 81.8 bits (41), Expect = 6e-12 Identities = 111/133 (83%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 470 gtagctagagtaacaaacttccataatgaagacaacggattcatggttttggatggtgat 529 ||||||||| ||||||| ||| | ||||| || || || | |||||| |||||||||||| Sbjct: 26744 gtagctagaataacaaatttc-acaatgaggataagggctacatggtgttggatggtgat 26686 Query: 530 gtttttgacgttccaattaggaaggatattgttcacagggtagtaaggtggcagcttgct 589 || ||||| |||||||| |||||||| |||||||| | || ||| | ||||| |||||| Sbjct: 26685 gtatttgatgttccaatcaggaaggacattgttcatcgagttgtacgttggcaacttgct 26626 Query: 590 aaaaggcaacagg 602 ||| ||||||||| Sbjct: 26625 aaacggcaacagg 26613
>emb|AJ293490.1|SHY293490 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR18 Length = 659 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Minus Query: 1028 cagcatgacaccctcataatgactcgggacgcaatcaacagaattgttgagcggatgcac 1087 |||||||||||||| |||||||||||| || ||||||||||| || ||||||||||| Sbjct: 657 cagcatgacacccttgtaatgactcgggctgctatcaacagaatcgtcgagcggatgcat 598 Query: 1088 acccccatcagccgctagcaagcaggg 1114 |||||||||| ||||||||||| |||| Sbjct: 597 acccccatcaaccgctagcaaggaggg 571
>gb|DQ002983.1| Glyceria striata mitochondrial ribosomal protein L5 (rpl5) gene, partial cds; nuclear gene for mitochondrial product Length = 612 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcaggtgtccctgtcatggaag 329 |||||||||||||||||||||| Sbjct: 1 tcaggtgtccctgtcatggaag 22
>ref|NM_127564.1| Arabidopsis thaliana structural constituent of ribosome (AT2G20060) mRNA, complete cds Length = 1274 Score = 44.1 bits (22), Expect = 1.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 509 ttcatggttttggatggtgatgtttttgacgttccaattaggaaggatat 558 ||||||||||| | |||||||| ||||| |||||||| ||||| ||||| Sbjct: 424 ttcatggttttagcaggtgatgtctttgatgttccaataaggaaagatat 473
>ref|XM_850545.1| PREDICTED: Canis familiaris similar to Myotubularin-related protein 2, transcript variant 2 (LOC606918), mRNA Length = 2183 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 actccgctctccgctcctcccgctcc 30 ||||||| |||||||||||||||||| Sbjct: 46 actccgccctccgctcctcccgctcc 71
>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete sequence Length = 97814 Score = 44.1 bits (22), Expect = 1.4 Identities = 43/50 (86%) Strand = Plus / Minus Query: 509 ttcatggttttggatggtgatgtttttgacgttccaattaggaaggatat 558 ||||||||||| | |||||||| ||||| |||||||| ||||| ||||| Sbjct: 58450 ttcatggttttagcaggtgatgtctttgatgttccaataaggaaagatat 58401
>gb|AY072419.1| Arabidopsis thaliana 50S ribosomal protein L4 (At2g20060) mRNA, complete cds Length = 1175 Score = 44.1 bits (22), Expect = 1.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 509 ttcatggttttggatggtgatgtttttgacgttccaattaggaaggatat 558 ||||||||||| | |||||||| ||||| |||||||| ||||| ||||| Sbjct: 419 ttcatggttttagcaggtgatgtctttgatgttccaataaggaaagatat 468
>gb|AY085545.1| Arabidopsis thaliana clone 156843 mRNA, complete sequence Length = 1274 Score = 44.1 bits (22), Expect = 1.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 509 ttcatggttttggatggtgatgtttttgacgttccaattaggaaggatat 558 ||||||||||| | |||||||| ||||| |||||||| ||||| ||||| Sbjct: 424 ttcatggttttagcaggtgatgtctttgatgttccaataaggaaagatat 473
>emb|BX820294.1|CNS0A8LD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1127 Score = 44.1 bits (22), Expect = 1.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 509 ttcatggttttggatggtgatgtttttgacgttccaattaggaaggatat 558 ||||||||||| | |||||||| ||||| |||||||| ||||| ||||| Sbjct: 399 ttcatggttttagcaggtgatgtctttgatgttccaataaggaaagatat 448
>gb|BT002156.1| Arabidopsis thaliana 50S ribosomal protein L4 (At2g20060) mRNA, complete cds Length = 972 Score = 44.1 bits (22), Expect = 1.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 509 ttcatggttttggatggtgatgtttttgacgttccaattaggaaggatat 558 ||||||||||| | |||||||| ||||| |||||||| ||||| ||||| Sbjct: 307 ttcatggttttagcaggtgatgtctttgatgttccaataaggaaagatat 356
>gb|DQ245889.1| Zea mays clone 21763 mRNA sequence Length = 808 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgcggaggccgccgccactgc 108 ||||||||||||||||||||| Sbjct: 214 tgcggaggccgccgccactgc 194
>gb|DQ245887.1| Zea mays clone 21722 mRNA sequence Length = 806 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgcggaggccgccgccactgc 108 ||||||||||||||||||||| Sbjct: 213 tgcggaggccgccgccactgc 193
>gb|DQ245886.1| Zea mays clone 21713 mRNA sequence Length = 807 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgcggaggccgccgccactgc 108 ||||||||||||||||||||| Sbjct: 213 tgcggaggccgccgccactgc 193
>gb|DQ245867.1| Zea mays clone 21286 mRNA sequence Length = 806 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgcggaggccgccgccactgc 108 ||||||||||||||||||||| Sbjct: 213 tgcggaggccgccgccactgc 193
>gb|DQ245866.1| Zea mays clone 21283 mRNA sequence Length = 814 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgcggaggccgccgccactgc 108 ||||||||||||||||||||| Sbjct: 219 tgcggaggccgccgccactgc 199
>ref|NM_001054646.1| Oryza sativa (japonica cultivar-group) Os02g0745600 (Os02g0745600) mRNA, complete cds Length = 2017 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gctgcggaggccgccgccactgctg 110 |||||||| |||||||||||||||| Sbjct: 268 gctgcggaagccgccgccactgctg 292
>gb|AC069538.10| Homo sapiens chromosome 10 clone RP11-205C5, complete sequence Length = 169772 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 aacttctatctagcaagactg 428 ||||||||||||||||||||| Sbjct: 103867 aacttctatctagcaagactg 103887
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1311 cttccgggcttcaaagttcaaaccc 1335 |||||| |||||||||||||||||| Sbjct: 2243660 cttccgagcttcaaagttcaaaccc 2243636
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gctgcggaggccgccgccactgctg 110 |||||||| |||||||||||||||| Sbjct: 31309985 gctgcggaagccgccgccactgctg 31310009
>emb|AL358817.19| Human DNA sequence from clone RP11-399N22 on chromosome 10 Contains 3' end of the ADAMTS14 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 14, a novel gene (FLJ32820), and a ribosomal protein S26 pseudogene, complete sequence Length = 134358 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 aacttctatctagcaagactg 428 ||||||||||||||||||||| Sbjct: 114491 aacttctatctagcaagactg 114471
>gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K3 complete sequence Length = 166757 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ttggctccagcaaatgaagcgctga 398 ||||||||||||||||||| ||||| Sbjct: 82382 ttggctccagcaaatgaagagctga 82358
>gb|AC007318.4| Homo sapiens BAC clone RP11-420C9 from 2, complete sequence Length = 204230 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 tttggccaaatgtctgctccaatgg 360 ||||||||||||||||||| ||||| Sbjct: 140678 tttggccaaatgtctgctcaaatgg 140702
>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178752 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 515 gttttggatggtgatgtttttgacg 539 |||| |||||||||||||||||||| Sbjct: 25317 gtttgggatggtgatgtttttgacg 25293
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gctgcggaggccgccgccactgctg 110 |||||||| |||||||||||||||| Sbjct: 79853 gctgcggaagccgccgccactgctg 79877
>gb|AC139705.4| Homo sapiens X BAC RP11-102M2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148316 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 ttggctccagcaaatgaagcgctga 398 ||||||||||||||||||| ||||| Sbjct: 127415 ttggctccagcaaatgaagagctga 127439
>dbj|AK103517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131H10, full insert sequence Length = 2019 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gctgcggaggccgccgccactgctg 110 |||||||| |||||||||||||||| Sbjct: 270 gctgcggaagccgccgccactgctg 294
>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete sequence Length = 130977 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 acaggaagaaagccttataag 661 ||||||||||||||||||||| Sbjct: 118419 acaggaagaaagccttataag 118439
>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete sequence Length = 176944 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 acaggaagaaagccttataag 661 ||||||||||||||||||||| Sbjct: 28556 acaggaagaaagccttataag 28576 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 246,779,051 Number of extensions: 12734314 Number of successful extensions: 237044 Number of sequences better than 10.0: 38 Number of HSP's gapped: 237041 Number of HSP's successfully gapped: 69 Length of query: 1450 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1427 Effective length of database: 18,503,978,556 Effective search space: 26405177399412 Effective search space used: 26405177399412 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)