| Clone Name | FLbaf69c18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_001218252.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_09631) mRNA, complete cds Length = 1947 Score = 89.7 bits (45), Expect = 5e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1229 tccagatcgtcactgtcatcatgggcttcctacaaatctgttccggcgtcgttctgctac 1288 ||||||||| ||| ||||||||||||||||| || ||||| |||||||||| || || | Sbjct: 845 tccagatcgccacggtcatcatgggcttcctgcagatctgcgccggcgtcgtcctcctgc 904 Query: 1289 aactctccaagtcggcaaaggacgtgccggactcagctgtcttcaagggcgatcttgacc 1348 |||||||||| ||||| |||||||| || ||| | || |||||||| ||||| || |||| Sbjct: 905 aactctccaaatcggccaaggacgtccccgacgccgccgtcttcaaaggcgacctggacc 964 Query: 1349 a 1349 | Sbjct: 965 a 965
>ref|XM_750030.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g07880) partial mRNA Length = 2226 Score = 73.8 bits (37), Expect = 3e-09 Identities = 211/269 (78%) Strand = Plus / Plus Query: 1036 cagtttaaggaatggttcctctacgtgctactagtctttgttgtggtcacgttactgacg 1095 ||||||||||| ||||| ||||||||||| || || ||||| | | || ||||||||| Sbjct: 697 cagtttaaggagtggtttctctacgtgctgcttgtgtttgtcattgcaaccttactgacg 756 Query: 1096 gagatcatctacctgaacaaagccttgaacttgttcaacgctgctttagtgacaccaaca 1155 ||||| |||||||| || ||||| |||||| | |||||||| || | || || || || Sbjct: 757 gagattatctacctcaataaagcgttgaacctcttcaacgccgccctcgtcacccccacc 816 Query: 1156 tactacgtcttcttcacgtctgcgacaatcgtcacttcggctgtcttgttccaaggattc 1215 ||||| |||||||| ||| | |||| |||||| | || || || ||||||| || ||| Sbjct: 817 tactatgtcttctttacgagttcgaccatcgtctcctccgcggtgttgttccggggtttc 876 Query: 1216 aaaggcaccccactccagatcgtcactgtcatcatgggcttcctacaaatctgttccggc 1275 ||||||||| | ||||||| ||| |||||| | || ||||| |||||||| | ||| Sbjct: 877 aaaggcaccggcatgcagatcgccacggtcatccttggattcctgcaaatctgcgcgggc 936 Query: 1276 gtcgttctgctacaactctccaagtcggc 1304 ||||| ||| | || || ||||||||||| Sbjct: 937 gtcgtgctgttgcagctgtccaagtcggc 965 Score = 61.9 bits (31), Expect = 1e-05 Identities = 70/83 (84%) Strand = Plus / Plus Query: 474 tacaatgaagaggcgggagaaggctatggatacctcaagaacgcttggtggtggctcggt 533 ||||||||||| ||||| || || || |||||||||||||||| ||||||||| ||| Sbjct: 190 tacaatgaagaagcgggcgaggggtacggatacctcaagaacgtctggtggtggtccggg 249 Query: 534 atgacactcatgattgttggaga 556 |||| ||||||||||| ||||| Sbjct: 250 atgatcctcatgattgtcggaga 272
>ref|XM_389849.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09673.1) partial mRNA Length = 1872 Score = 67.9 bits (34), Expect = 2e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 619 gtcgcatacgccttcaccgacgccatcctcgtaacccccatgggcgccctctccgtcgtc 678 |||||||||||||| ||||| || |||||||| || ||| |||||||||| ||||||||| Sbjct: 262 gtcgcatacgcctttaccgatgcaatcctcgtcactcccctgggcgccctatccgtcgtc 321 Query: 679 at 680 || Sbjct: 322 at 323 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 469 agaagtacaatgaagaggcgggagaaggctatggatacctcaagaacgcttggtggtgg 527 |||| |||||||||| || || |||||||| ||||||||||||||| |||||||||| Sbjct: 161 agaaatacaatgaagtcgctggtgaaggctacggatacctcaagaacttttggtggtgg 219
>ref|XM_001223457.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_04244) mRNA, complete cds Length = 2400 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 628 gccttcaccgacgccatcctcgtaacccccatgggcgccctctccgtcgtcat 680 |||||||||||||||||||| || ||||| ||||||| ||||| |||||||| Sbjct: 298 gccttcaccgacgccatccttgtcaccccgctgggcgctctctctgtcgtcat 350 Score = 44.1 bits (22), Expect = 2.7 Identities = 43/50 (86%) Strand = Plus / Plus Query: 904 ggccccaagtacggaaagaagactatgatggtctacatcactatctgcag 953 ||||| ||||||||||| |||| |||| |||| |||||| | |||||||| Sbjct: 574 ggcccgaagtacggaaacaagaatatgttggtttacatctccatctgcag 623
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Minus Query: 1291 ctctccaagtcggcaaaggacgtgccggactcagctgtcttcaagggcgatcttgacca 1349 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| Sbjct: 2380426 ctctccaagtccgccaaggacgtccccgactccgctgtcttcaaaggcgacctcgacca 2380368
>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4 Length = 177225 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Plus Query: 501 ggatacctcaagaacgcttggtggtgg 527 ||||||||||||||||||||||||||| Sbjct: 8390 ggatacctcaagaacgcttggtggtgg 8416
>ref|XM_951933.1| Neurospora crassa OR74A hypothetical protein (NCU04457.1) partial mRNA Length = 2397 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Plus Query: 501 ggatacctcaagaacgcttggtggtgg 527 ||||||||||||||||||||||||||| Sbjct: 220 ggatacctcaagaacgcttggtggtgg 246
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 48.1 bits (24), Expect = 0.17 Identities = 24/24 (100%) Strand = Plus / Plus Query: 993 cggtgctgccgtcgtagcgcaggc 1016 |||||||||||||||||||||||| Sbjct: 1833557 cggtgctgccgtcgtagcgcaggc 1833580
>gb|AC188609.2| Taeniopygia guttata BAC clone TGMCBa-23H12 from chromosome unknown, complete sequence Length = 155715 Score = 46.1 bits (23), Expect = 0.68 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 tggtgccctggaccctgtccaaa 73 ||||||||||||||||||||||| Sbjct: 149177 tggtgccctggaccctgtccaaa 149155
>gb|AC189221.1| Brassica rapa subsp. pekinensis clone KBrB010L05, complete sequence Length = 156080 Score = 46.1 bits (23), Expect = 0.68 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1674 ccctggtttcttccaaagattac 1696 ||||||||||||||||||||||| Sbjct: 409 ccctggtttcttccaaagattac 387
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.68 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1950 cgctcccccaagaccacctcccc 1972 ||||||||||||||||||||||| Sbjct: 291055 cgctcccccaagaccacctcccc 291033
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 gtgctgccgtcgtagcgcaggc 1016 |||||||||||||||||||||| Sbjct: 1645539 gtgctgccgtcgtagcgcaggc 1645560
>ref|XM_001215822.1| Aspergillus terreus NIH2624 hypothetical protein (ATEG_06644) mRNA, complete cds Length = 825 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 628 gccttcaccgacgccatcctcg 649 |||||||||||||||||||||| Sbjct: 346 gccttcaccgacgccatcctcg 367
>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence Length = 120017 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2406 tcttctcttctgttctcagtta 2427 |||||||||||||||||||||| Sbjct: 81182 tcttctcttctgttctcagtta 81161
>ref|XM_658811.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6299.2), mRNA Length = 2076 Score = 44.1 bits (22), Expect = 2.7 Identities = 67/82 (81%) Strand = Plus / Plus Query: 1091 tgacggagatcatctacctgaacaaagccttgaacttgttcaacgctgctttagtgacac 1150 |||| |||||||| || || ||||||||| ||||| | || ||||| ||| | || || | Sbjct: 716 tgaccgagatcatatatctcaacaaagccctgaacatctttaacgccgctctggttacgc 775 Query: 1151 caacatactacgtcttcttcac 1172 | || ||||||||||||||||| Sbjct: 776 ccacttactacgtcttcttcac 797
>emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 on chromosome 3, complete sequence Length = 133910 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2406 tcttctcttctgttctcagtta 2427 |||||||||||||||||||||| Sbjct: 117160 tcttctcttctgttctcagtta 117139
>gb|AC027273.5| Homo sapiens BAC clone RP11-764F10 from 4, complete sequence Length = 201621 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2710 tgtagatttatatcatgatgat 2731 |||||||||||||||||||||| Sbjct: 124993 tgtagatttatatcatgatgat 124972
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 995 gtgctgccgtcgtagcgcaggc 1016 |||||||||||||||||||||| Sbjct: 295074 gtgctgccgtcgtagcgcaggc 295053
>dbj|AB106877.1| Xenopus laevis ap-2rep mRNA for AP-2 repressor, complete cds Length = 2282 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 tccacgtgcagcccagcctcgtgcac 142 |||||||||||||||||| ||||||| Sbjct: 968 tccacgtgcagcccagccacgtgcac 943 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 397,419,578 Number of extensions: 19708866 Number of successful extensions: 97954 Number of sequences better than 10.0: 19 Number of HSP's gapped: 97952 Number of HSP's successfully gapped: 22 Length of query: 2753 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2730 Effective length of database: 18,503,978,556 Effective search space: 50515861457880 Effective search space used: 50515861457880 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)