ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66h13 |
|---|---|
| Clone Library Name | barley_pub |
>AK107633:Os07g0216700 | Length = 159 Score = 37.4 bits (85), Expect = 0.009 Identities = 28/107 (26%), Positives = 45/107 (42%) Frame = +3 Query: 174 SCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNIIQGSIQRD 353 SCRNY+ C V K +LL CC +L+ +P QCRC+ + ++ Sbjct: 50 SCRNYIARWCA------VAGGRLDSGKQPPRQLLEPCCRELAAVPMQCRCDALSVLVR-- 101 Query: 354 LGGFFGFQRDRTVKVIQAAKNLPPRCNQGPACNIPSTTGYYW*CSFQ 494 G + DR +I +++ P C+ + S Y C+ Q Sbjct: 102 --GVVTEEGDRVAGMI--SQHAAPGCDAATIAGMASALTDYGRCNLQ 144
>AK107674:Os07g0216600 | Length = 158 Score = 35.0 bits (79), Expect = 0.043 Identities = 27/107 (25%), Positives = 44/107 (41%) Frame = +3 Query: 174 SCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNIIQGSIQRD 353 SCRNY+ C + K E L CC +L+ +P QCRC+ + ++ Sbjct: 48 SCRNYIARWCAAAGGRMDSR------KQPPREFLEPCCRELAAVPMQCRCDALSVLVR-- 99 Query: 354 LGGFFGFQRDRTVKVIQAAKNLPPRCNQGPACNIPSTTGYYW*CSFQ 494 G + DR +I +++ P C+ + S Y C+ Q Sbjct: 100 --GVVTEEGDRVSGMI--SQHAAPGCDAATIAGMASALTDYGRCNLQ 142
>D43659:Os07g0214300 | Length = 106 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 15 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 71 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 72 RAAASLPAFCN----VDIPNGTGGVCYW 95
>D43657:Os07g0214300 | Length = 107 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 16 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 72 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 73 RAAASLPAFCN----VDIPNGTGGVCYW 96
>D42140:Os07g0214300 | Length = 156 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 65 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 121 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 122 RAAASLPAFCN----VDIPNGTGGVCYW 145
>X62091:Os07g0214300 | Length = 166 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 75 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 131 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 132 RAAASLPAFCN----VDIPNGTGGVCYW 155
>D42139:Os07g0214300 | Length = 166 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 75 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 131 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 132 RAAASLPAFCN----VDIPNGTGGVCYW 155
>D11432:Os07g0214300 | Length = 166 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 75 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 131 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 132 RAAASLPAFCN----VDIPNGTGGVCYW 155
>AK107328:Os07g0214300 | Length = 166 Score = 34.7 bits (78), Expect = 0.056 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%) Frame = +3 Query: 264 EELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTVKVI 401 E+L DCC QL+ + CRC N + G I R+LG F G +R + Sbjct: 75 EQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG---DLE 131 Query: 402 QAAKNLPPRCNQGPACNIPSTTG--YYW 479 +AA +LP CN +IP+ TG YW Sbjct: 132 RAAASLPAFCN----VDIPNGTGGVCYW 155
>AK058812:Os03g0793800 | Length = 177 Score = 34.3 bits (77), Expect = 0.073 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 18/81 (22%) Frame = +3 Query: 282 CCSQLS---QMPPQCRCNIIQGSIQRDLGGFFGFQRDRTVKVIQAAKNLPP---RCNQ-- 437 CCSQL+ Q PQC C I G +GG + R +++ +A + P RCN Sbjct: 57 CCSQLATVVQSQPQCLCAAISGDSSSSIGG-VTIDKTRALELPKACNVVTPPASRCNSAG 115 Query: 438 ----------GPACNIPSTTG 470 PA P TG Sbjct: 116 GNTPGAATTTSPATQTPGATG 136
>Os06g0507100:Os06g0507100 | Length = 140 Score = 33.9 bits (76), Expect = 0.095 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 10/107 (9%) Frame = +3 Query: 168 LDSCRNYLLDRCTTMKDFPVTWRWWTWWK---GGCEELLHDCCSQLSQMPPQCRCNIIQG 338 ++SC ++ +C+ PV+ W + C+ + CC ++ M Q RC I Sbjct: 30 MNSCNEFVRRQCS-----PVSLPWEQSHRLKLSSCQVMRQQCCRRMRLMAQQYRCQAIFT 84 Query: 339 SIQRDL------GGFFGFQRDRTVKVIQAAKNLPPRCNQGPA-CNIP 458 +Q + FG + + Q A NLP C P CN P Sbjct: 85 MVQAIMQQVQLDASLFGVPQAQA--QAQVALNLPSMCGVYPRYCNTP 129
>D43658: | Length = 109 Score = 33.5 bits (75), Expect = 0.12 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Frame = +3 Query: 255 GGCEELLHDCCSQLSQMPPQ-CRC---NIIQGSIQRDLGG----------FFGFQRDRTV 392 G E+L DCC QL+ + CRC N + G I R+LG F G +R Sbjct: 15 GADEQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEVFPGCRRG--- 71 Query: 393 KVIQAAKNLPPRCNQGPACNIPSTTG--YYW 479 + +A LP CN +IP+ TG YW Sbjct: 72 DLERARATLPAFCN----VDIPNGTGGVCYW 98
>Os11g0535100:Os11g0535100 | Length = 135 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +3 Query: 270 LLHDCCSQLSQMPPQCRCNI---IQGSIQRDLGGFFGFQRDRTVKVIQAAKNLPPRCNQG 440 L CC QL M PQC C+ + S+Q+ + G Q+ ++ A +P CN Sbjct: 68 LQQQCCMQLQGMMPQCNCDTSYQMMQSMQQVICAGLGQQQ----MMMNMAMQMPYMCNMA 123 Query: 441 P 443 P Sbjct: 124 P 124
>X84649:Os03g0766100 | Length = 134 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +3 Query: 270 LLHDCCSQLSQMPPQCRCNI---IQGSIQRDLGGFFGFQRDRTVKVIQAAKNLPPRCNQG 440 L CC QL M PQC C + S+Q+ + G Q ++++ A +P CN Sbjct: 68 LQQQCCMQLQGMMPQCHCGTSCQMMQSMQQVICAGLGQQ-----QMMKMAMQMPYMCNMA 122 Query: 441 P 443 P Sbjct: 123 P 123
>X15231:Os03g0766100 | Length = 134 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +3 Query: 270 LLHDCCSQLSQMPPQCRCNI---IQGSIQRDLGGFFGFQRDRTVKVIQAAKNLPPRCNQG 440 L CC QL M PQC C + S+Q+ + G Q ++++ A +P CN Sbjct: 68 LQQQCCMQLQGMMPQCHCGTSCQMMQSMQQVICAGLGQQ-----QMMKMAMQMPYMCNMA 122 Query: 441 P 443 P Sbjct: 123 P 123
>AK108254:Os03g0766100 | Length = 134 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +3 Query: 270 LLHDCCSQLSQMPPQCRCNI---IQGSIQRDLGGFFGFQRDRTVKVIQAAKNLPPRCNQG 440 L CC QL M PQC C + S+Q+ + G Q ++++ A +P CN Sbjct: 68 LQQQCCMQLQGMMPQCHCGTSCQMMQSMQQVICAGLGQQ-----QMMKMAMQMPYMCNMA 122 Query: 441 P 443 P Sbjct: 123 P 123
>X63990:Os05g0499100 | Length = 186 Score = 31.2 bits (69), Expect = 0.61 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = +3 Query: 168 LDSCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNIIQGSIQ 347 LD+CR L + T + F +R + G L CC QL + +CRC I+ ++ Sbjct: 45 LDACRQVLDRQLTGRERFQPMFR-----RPGALGLRMQCCQQLQDVSRECRCAAIRRMVR 99
>AK107870:Os07g0222000 | Length = 148 Score = 30.4 bits (67), Expect = 1.0 Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 13/107 (12%) Frame = +3 Query: 168 LDSCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNII----- 332 L CR Y+L R + + W L CC +L+ +P CRC + Sbjct: 44 LRGCRRYVLRRACGLAAGGRLYDW---------SLKERCCQELAAVPAYCRCAALAYFMD 94 Query: 333 ---QGSIQRDLGGFFGFQRDRTVKVIQAAKNLPPRCN-----QGPAC 449 +G + DL G T + + A P CN GP C Sbjct: 95 GASEGRLLEDLPGC----PRETQRGLAAMLTTPGECNLETIHGGPYC 137
>AK105001:Os09g0542100 | Length = 490 Score = 29.6 bits (65), Expect = 1.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +3 Query: 219 FPVTWRWWTWWKGGC 263 F ++ WW WW GGC Sbjct: 12 FVASYGWWWWWCGGC 26
>AK107696:Os07g0213600 | Length = 154 Score = 28.9 bits (63), Expect = 3.0 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = +3 Query: 168 LDSCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNIIQGSIQ 347 L CR YLL RC V R CC QL ++ +CRC+ ++ ++ Sbjct: 61 LPGCRAYLLRRCGGGDPPGVRAR---------------CCHQLREVAARCRCDALRAMVE 105
>AK073856:Os07g0457300 | Length = 637 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +3 Query: 267 ELLHDCCSQLSQMPPQCRCNIIQGSIQRDLGGFFGFQRDRTVKVIQAAKNL 419 E LHDC QL P +CR + G GF G + +K+++ K L Sbjct: 2 EELHDCVVQLRSNPQRCRDTVYVGC----GAGFGGDRPMAALKLLERVKEL 48
>Os07g0590800:Os07g0590800 | Length = 235 Score = 25.4 bits (54), Expect(2) = 4.3 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = +3 Query: 231 WRWWTWWKG 257 W WW WW G Sbjct: 220 WWWWWWWGG 228 Score = 21.6 bits (44), Expect(2) = 4.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +2 Query: 83 LRAVRRSCWQLRGWCWWGW 139 L +VRR R W WW W Sbjct: 213 LGSVRR-----RWWWWWWW 226
>AK120321:Os09g0458400 | Length = 198 Score = 28.1 bits (61), Expect = 5.2 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +3 Query: 234 RWWTWWKGGCEELLHD 281 RWW WW G E L D Sbjct: 91 RWWDWWSGDRESYLVD 106
>AK070055:Os09g0458400 | Length = 205 Score = 28.1 bits (61), Expect = 5.2 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +3 Query: 234 RWWTWWKGGCEELLHD 281 RWW WW G E L D Sbjct: 91 RWWDWWSGDRESYLVD 106
>Os11g0704100:Os11g0704100 | Length = 1160 Score = 25.4 bits (54), Expect(2) = 6.0 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 141 HHPHQHHPRNCQQLLRTARRRRSLP 67 HH H+ +PR+ LL+ RR LP Sbjct: 405 HHVHKLYPRDAWSLLKKQVRRVILP 429 Score = 20.8 bits (42), Expect(2) = 6.0 Identities = 6/7 (85%), Positives = 7/7 (100%) Frame = -3 Query: 256 PFHHVHQ 236 PFHHVH+ Sbjct: 403 PFHHVHK 409
>AK062284:Os04g0610100 | Length = 325 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = +3 Query: 213 KDFPVTWRWWTWWKGGCEELLHDCCSQLSQMPPQCRCNIIQGSIQRDLGGFFGFQRDRTV 392 K FP W WW+ CE + ++ QM + R N G G F R + Sbjct: 68 KPFPPAWMHPNWWERLCEYWAKE---EVLQMSLKYRKNRFVGGRAHHTSGSRSFAMQRQL 124 Query: 393 KVIQ 404 VI+ Sbjct: 125 MVIE 128
>Os01g0107400:Os01g0107400 | Length = 376 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 7/33 (21%) Frame = -1 Query: 147 VEHHPHQHHPRNCQQLL-------RTARRRRSL 70 + HH HQHH + QQ L RT RR SL Sbjct: 342 LHHHHHQHHNHHHQQSLLRCFPRYRTTRRSASL 374
>Os04g0388600:Os04g0388600 | Length = 148 Score = 25.4 bits (54), Expect(2) = 7.5 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = +2 Query: 122 WCWWGWCSTMP 154 WCWW W +P Sbjct: 57 WCWWWWWWLLP 67 Score = 20.8 bits (42), Expect(2) = 7.5 Identities = 6/14 (42%), Positives = 6/14 (42%) Frame = +2 Query: 98 RSCWQLRGWCWWGW 139 R W W WW W Sbjct: 51 RPPWWWWCWWWWWW 64
>Os05g0353600:Os05g0353600 | Length = 365 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -2 Query: 248 PCPPTPGDRKILHRCAS 198 P PP PG R +LHR S Sbjct: 176 PAPPGPGSRNVLHRVRS 192
>Os04g0461300:Os04g0461300 | Length = 324 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +3 Query: 156 LGTKLDSCRNYLLDRCTTMKDFPVTWRWWTWWKGGCEELLHDCC 287 LG K+D +Y D ++++ + WW+G E L CC Sbjct: 273 LGLKVDPSEDYTKDLVQHVRNYTDGVKCDGWWRGEEEWLSEMCC 316
>AK109130:Os01g0604000 | Length = 226 Score = 27.3 bits (59), Expect = 8.9 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -3 Query: 367 KKPPRSRWIDPW 332 ++PPR RWI PW Sbjct: 65 RRPPRPRWIPPW 76
>AK071664:Os02g0275200 | Length = 601 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 210 MKDFPVTWRWWTWWKGGCEE 269 MK WR W W+GGC E Sbjct: 38 MKLVTPPWRRWRRWRGGCAE 57
>AK067145:Os01g0604000 | Length = 226 Score = 27.3 bits (59), Expect = 8.9 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -3 Query: 367 KKPPRSRWIDPW 332 ++PPR RWI PW Sbjct: 65 RRPPRPRWIPPW 76
>Os03g0331800:Os03g0331800 | Length = 228 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 177 RNLALSLGGIVEHHPHQHHPRNCQQLLRTARRRRSLPKQ 61 R+LA+++ VE H P+ Q + A RRR LP+Q Sbjct: 165 RDLAVAVA--VEQVEHPAQPQRVQAAVPEAERRRGLPRQ 201
>AK120679:Os03g0101400 | Length = 361 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = -1 Query: 141 HHPHQHHPRNCQQLLRTARR--RRSLPKQADPRGRR 40 HH H+HH R + R RR RR+LP+ P R Sbjct: 149 HHRHRHHVRRRRAHPRHHRRHQRRALPQPDRPEHHR 184
>AK073544:Os01g0895300 | Length = 376 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 132 HQHHPRNCQQLLRTARRRRSLPKQADPRGRRP 37 H H P++ + R RR R LP++A R R P Sbjct: 327 HLHRPQHRARGQRRPRRLRDLPRRAGARRRLP 358
>AK073348:Os03g0285900 | Length = 330 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -1 Query: 126 HHPRNCQQLLRTARRRRSLPKQADPRGRR 40 H RNCQ R RR RS + PR R Sbjct: 135 HIERNCQNSPRNLRRERSYSRSPSPRRGR 163 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,322,305 Number of extensions: 525692 Number of successful extensions: 1880 Number of sequences better than 10.0: 37 Number of HSP's gapped: 1868 Number of HSP's successfully gapped: 40 Length of query: 214 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 118 Effective length of database: 11,555,919 Effective search space: 1363598442 Effective search space used: 1363598442 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
