ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69a21 |
|---|---|
| Clone Library Name | barley_pub |
>Q8L6Y4:EMF2_ARATH Polycomb protein EMBRYONIC FLOWER 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 631 Score = 216 bits (550), Expect = 3e-55 Identities = 124/323 (38%), Positives = 180/323 (55%), Gaps = 5/323 (1%) Frame = +2 Query: 17 QNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTS---FSEFASTKATFMIPDVKNMA 187 Q +FPLY+LLA S P+ +S +YRFSRAC+LT + +A F++PD+ +A Sbjct: 99 QKLFPLYILLARLVSPK-PVAEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDMNRLA 157 Query: 188 TSRACNLSVILIRCASQGQAGENNCSGDHVEASALRKLEGKCFWGKIPINLLGSCLENCV 367 IL + Q + + + + G C W KIP+ L + + Sbjct: 158 LEAKSGSLAILFISFAGAQNSQFGIDSGKIHSG---NIGGHCLWSKIPLQSLYASWQKSP 214 Query: 368 TLNLGHTVELASTVTMSPSFLEPKFLEQDSCLTFC--SHKVDATGSYQLQVGISVQEAGA 541 ++LG V+ S V M P F++ K + ++ C++ S+ + ++ Q+QV IS +E G+ Sbjct: 215 NMDLGQRVDTVSLVEMQPCFIKLKSMSEEKCVSIQVPSNPLTSSSPQQVQVTISAEEVGS 274 Query: 542 RDMSEXXXXXXXXXXXXXXXXXHIIRLRAGNVIFNFKYYNNTMQKTEVTEDFACAFCLVK 721 + S IIRLR GNV+FN++YYNN +QKTEVTEDF+C FCLVK Sbjct: 275 TEKSPYSSFSYNDISSSSLL--QIIRLRTGNVVFNYRYYNNKLQKTEVTEDFSCPFCLVK 332 Query: 722 CGSYKGLGCHLNSTHDLFHFEFWISEECQAVNVSLKADAWKMELMGKGVDPRHQTFSYCS 901 C S+KGL HL STHDL +FEFW++EE QAVNVSLK + ++ VDP+ QTF + S Sbjct: 333 CASFKGLRYHLPSTHDLLNFEFWVTEEFQAVNVSLKTETMISKVNEDDVDPKQQTFFFSS 392 Query: 902 RLKVRRRRSVATAENISPVHPHI 970 + K RRRR + + S PH+ Sbjct: 393 K-KFRRRRQKSQVRS-SRQGPHL 413 Score = 161 bits (407), Expect = 1e-38 Identities = 73/113 (64%), Positives = 82/113 (72%) Frame = +3 Query: 1038 PIAVEQVFSXXXXXXXXXXXXXXXXXRRMLADFLDVTKDEKLIMHMWNSFIRKQRVLADG 1217 P+A+EQV S RRML DF+DVTKDEK +MHMWNSF+RKQRVLADG Sbjct: 515 PMALEQVLSDRDSEDEVDDDVADFEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADG 574 Query: 1218 HIPWACEGFSRLHGPQLVQNPPLLWCWRFVMIKLWNHNLLDARAMNTCNMILE 1376 HIPWACE FSRLHGP +V+ P L+WCWR M+KLWNH LLDAR MN CN LE Sbjct: 575 HIPWACEAFSRLHGPIMVRTPHLIWCWRVFMVKLWNHGLLDARTMNNCNTFLE 627
>Q8W5B1:VRN2_ARATH Polycomb group protein VERNALIZATION 2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 440 Score = 131 bits (330), Expect = 9e-30 Identities = 69/155 (44%), Positives = 83/155 (53%), Gaps = 12/155 (7%) Frame = +3 Query: 1038 PIAVEQVFSXXXXXXXXXXXXXXXXXRRMLADFLDVTKDEKLIMHMWNSFIRKQRVLADG 1217 P+A+EQV S R+ML DF+DV KDEK MH+WNSF+RKQRV+ADG Sbjct: 277 PMALEQVMSDRDSEDEVDDDVADFEDRQMLDDFVDVNKDEKQFMHLWNSFVRKQRVIADG 336 Query: 1218 HIPWACEGFSRLHGPQLVQNPPLLWCWRFVMIKLWNHNLLDARAMNTCNMILEGYH---- 1385 HI WACE FSR + +L L WCWR +IKLWNH L+D+ +N CN ILE Sbjct: 337 HISWACEVFSRFYEKELHCYSSLFWCWRLFLIKLWNHGLVDSATINNCNTILENCRNTSV 396 Query: 1386 --------PHPKKKT*VDRAPVDHPIPHPKKM*VD 1466 HP + VDHP K VD Sbjct: 397 TNNNNNSVDHPSDSNTNNNNIVDHPNDIKNKNNVD 431 Score = 105 bits (262), Expect = 7e-22 Identities = 52/99 (52%), Positives = 70/99 (70%) Frame = +2 Query: 629 GNVIFNFKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQ 808 G V+FN+K NNT+Q+TEV ED +C FC + CGS+KGL HLNS+HDLF FEF + EE Q Sbjct: 66 GMVVFNYKDCNNTLQRTEVREDCSCPFCSMLCGSFKGLQFHLNSSHDLFEFEFKLLEEYQ 125 Query: 809 AVNVSLKADAWKMELMGKGVDPRHQTFSYCSRLKVRRRR 925 VNVS+K +++ E G D + + FS CS+ + RR+R Sbjct: 126 TVNVSVKLNSFIFEEEGSD-DDKFEPFSLCSKPRKRRQR 163
>Q9ZNT9:FIS2_ARATH Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2 - Arabidopsis| thaliana (Mouse-ear cress) Length = 632 Score = 99.8 bits (247), Expect = 4e-20 Identities = 46/112 (41%), Positives = 63/112 (56%) Frame = +3 Query: 1038 PIAVEQVFSXXXXXXXXXXXXXXXXXRRMLADFLDVTKDEKLIMHMWNSFIRKQRVLADG 1217 PI EQV S R L + V+K+EK M++WN F+RKQRV+ADG Sbjct: 493 PITFEQVMSNEDSENETDDYALDISERLRLERLVGVSKEEKRYMYLWNIFVRKQRVIADG 552 Query: 1218 HIPWACEGFSRLHGPQLVQNPPLLWCWRFVMIKLWNHNLLDARAMNTCNMIL 1373 H+PWACE F++LH ++ + W WR IKLWN+ L+ A+ + C IL Sbjct: 553 HVPWACEEFAKLHKEEMKNSSSFDWWWRMFRIKLWNNGLICAKTFHKCTTIL 604 Score = 72.8 bits (177), Expect = 5e-12 Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 3/128 (2%) Frame = +2 Query: 674 KTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQA--VNVSLKADAWKM 847 K EV E+F+C FCL+ CG ++GL HL S+HD F FEF+ +E+ V+VS+K+D K Sbjct: 4 KAEVVENFSCPFCLIPCGGHEGLQLHLKSSHDAFKFEFYRAEKDHGPEVDVSVKSDTIKF 63 Query: 848 ELMGKGV-DPRHQTFSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPEDTQAGSKDEFV 1024 ++ V +P+ ++CS+ + +RR + N+ ++ +M+ +D G++++ Sbjct: 64 GVLKDDVGNPQLSPLTFCSKNR-NQRRQRDDSNNVKKLNVLLMEL-DLDDLPRGTENDST 121 Query: 1025 QREDANSS 1048 D N S Sbjct: 122 HVNDDNVS 129
>Q9NJG9:SUZ12_DROME Polycomb protein Su(z)12 - Drosophila melanogaster (Fruit fly)| Length = 900 Score = 45.4 bits (106), Expect = 9e-04 Identities = 24/79 (30%), Positives = 40/79 (50%) Frame = +2 Query: 635 VIFNFKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAV 814 +++NF Y NNT Q+TE T++ C +C + C L HL H F+F + + + Sbjct: 391 IVYNFMYSNNTRQQTEYTQELNCPWCGLDCLRLYALLKHLKLCHARFNFTYQPAGSGARI 450 Query: 815 NVSLKADAWKMELMGKGVD 871 +V++ DA+ G D Sbjct: 451 DVTIN-DAYDGSYAGSPYD 468 Score = 40.0 bits (92), Expect = 0.036 Identities = 24/87 (27%), Positives = 44/87 (50%) Frame = +3 Query: 1119 RMLADFLDVTKDEKLIMHMWNSFIRKQRVLADGHIPWACEGFSRLHGPQLVQNPPLLWCW 1298 +M+ +F DV + EK +M +WN + + + D +P ACE F G ++V+ L + Sbjct: 562 QMIDEFSDVNEGEKELMKLWNLHVMRHGFVGDCQLPIACEMFLDAKGTEIVRK-NLYRNF 620 Query: 1299 RFVMIKLWNHNLLDARAMNTCNMILEG 1379 M L+++ L+ A + L+G Sbjct: 621 ILHMCSLFDYGLIAAETVYKTVQKLQG 647
>Q80U70:SUZ12_MOUSE Polycomb protein Suz12 - Mus musculus (Mouse)| Length = 741 Score = 44.7 bits (104), Expect = 0.001 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 1/135 (0%) Frame = +2 Query: 635 VIFNFKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAV 814 + + F Y NNT Q+TE +D C +C + C L HL H F F + + + Sbjct: 430 IFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCHSRFIFNYVYHPKGARI 489 Query: 815 NVSLKADAWKMELMGKGVDPRHQT-FSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPE 991 +VS+ + + G D Q F++ V+R +P+ HI+ P+ Sbjct: 490 DVSIN-ECYDGSYAGNPQDIHRQPGFAFSRNGPVKR----------TPI-THILVC-RPK 536 Query: 992 DTQAGSKDEFVQRED 1036 T+A S EF++ ED Sbjct: 537 RTKA-SMSEFLESED 550 Score = 36.2 bits (82), Expect = 0.53 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +3 Query: 1125 LADFLDVTKDEKLIMHMWNSFIRKQRVLADGHIPWACEGFSRLHGPQLVQ 1274 + +F DV + EK +M +WN + K +AD + AC F +G ++++ Sbjct: 602 IEEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIK 651
>Q15022:SUZ12_HUMAN Polycomb protein SUZ12 - Homo sapiens (Human)| Length = 739 Score = 44.7 bits (104), Expect = 0.001 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 1/135 (0%) Frame = +2 Query: 635 VIFNFKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAV 814 + + F Y NNT Q+TE +D C +C + C L HL H F F + + + Sbjct: 428 IFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCHSRFIFNYVYHPKGARI 487 Query: 815 NVSLKADAWKMELMGKGVDPRHQT-FSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPE 991 +VS+ + + G D Q F++ V+R +P+ HI+ P+ Sbjct: 488 DVSIN-ECYDGSYAGNPQDIHRQPGFAFSRNGPVKR----------TPI-THILVC-RPK 534 Query: 992 DTQAGSKDEFVQRED 1036 T+A S EF++ ED Sbjct: 535 RTKA-SMSEFLESED 548 Score = 36.2 bits (82), Expect = 0.53 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +3 Query: 1125 LADFLDVTKDEKLIMHMWNSFIRKQRVLADGHIPWACEGFSRLHGPQLVQ 1274 + +F DV + EK +M +WN + K +AD + AC F +G ++++ Sbjct: 600 IEEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIK 649
>Q5T749:KPRP_HUMAN Keratinocyte proline-rich protein - Homo sapiens (Human)| Length = 579 Score = 35.4 bits (80), Expect = 0.90 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +1 Query: 1432 IPFPTPRRCESIEHLWIIPFPTPRRC-ESIEHLWIIPFPDRAPVDHPIPHPKKKI*VDRA 1608 +P P P +CE P PR C + EH P P+ P+ P P P+ R+ Sbjct: 447 VPLPRPGQCE---------IPEPRPCLQPCEHPEPCPRPEPIPLPAPCPSPEPCRETWRS 497 Query: 1609 PSIPWG 1626 PS WG Sbjct: 498 PSPCWG 503
>Q7Z591:AKNA_HUMAN AT-hook-containing transcription factor - Homo sapiens (Human)| Length = 1439 Score = 35.0 bits (79), Expect = 1.2 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 11/77 (14%) Frame = +2 Query: 1385 PPP*EEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVS-------RSSTCGSSHS 1543 PPP D + CG SPP+ D S+T G+ + + S RS GSS Sbjct: 1263 PPP--ADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQAGSSPR 1320 Query: 1544 PIEHLWII----PFPTP 1582 P LW + P P P Sbjct: 1321 PPPGLWYLATAPPAPAP 1337
>Q06841:NO75_LUPLU Early nodulin 75 protein - Lupinus luteus (European yellow lupin)| Length = 434 Score = 34.7 bits (78), Expect = 1.5 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = +3 Query: 1383 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*V-----DRAPVDHPIPR 1547 HP P ++ P+++P PH K P+++P PH K ++ P+++P+P Sbjct: 37 HPPPVHPPPHEKPPIEYPPPHTK------PPIEYPPPHVKPPIQYPPPHEKPPIEYPLPH 90 Query: 1548 SSTCGSSHSPPQEE 1589 + PP E+ Sbjct: 91 EKP--PVYEPPYEK 102
>P34735:YLU2_PICAN Uncharacterized protein in LEU2 3'region - Pichia angusta (Yeast)| (Hansenula polymorpha) Length = 373 Score = 28.9 bits (63), Expect(2) = 1.8 Identities = 20/47 (42%), Positives = 25/47 (53%) Frame = +2 Query: 1397 EEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSS 1537 EE+ SS+ SSHS + S SST S+ S +S SST SS Sbjct: 103 EENDDDSSSAQSSHSSTDDATSTSST--STTSSSSSSLSSSSTSSSS 147 Score = 24.3 bits (51), Expect(2) = 1.8 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 Query: 1542 PRSSTCGSSHSPPQEEDMSRSST 1610 P+SST S+ S P +S SST Sbjct: 153 PQSSTMSSTDSSPTSSSLSASST 175
>Q5H9T9:CN155_HUMAN Uncharacterized protein C14orf155 - Homo sapiens (Human)| Length = 837 Score = 33.5 bits (75), Expect = 3.4 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 6/62 (9%) Frame = +2 Query: 1379 IPPPP*EEDVSRSSTCGSSHSP------PQEDVSRSSTCGSSHSPPQEDVSRSSTCGSSH 1540 + PPP EE S + +P P E+ T + HSPP +DV H Sbjct: 670 VQPPPAEEAPSEVQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKH 729 Query: 1541 SP 1546 SP Sbjct: 730 SP 731
>O67784:Y1974_AQUAE Uncharacterized protein aq_1974 - Aquifex aeolicus| Length = 114 Score = 33.1 bits (74), Expect = 4.5 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 1176 WNSFIRKQRVLADGHIPWACEGFSRLHGPQLVQNPPLLWCWRFVMIKLWNHNL 1334 W S ++L DG W EG+ G QL N W W F+ +L NL Sbjct: 63 WASRTNNFKLLTDGEWVWV-EGYEEHIGKQLPLNQARAWSWEFIKNRLKELNL 114
>Q62392:PHLA1_MOUSE Pleckstrin homology-like domain family A member 1 - Mus musculus| (Mouse) Length = 261 Score = 32.7 bits (73), Expect = 5.8 Identities = 22/76 (28%), Positives = 30/76 (39%) Frame = +3 Query: 1383 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTCG 1562 HPHP + + P HP PHP HP PHP ++ P+ Sbjct: 207 HPHPHPYSHPHQHPHPHPHPHP-----------HPHPHPYQLQHAHQPL----------- 244 Query: 1563 SSHSPPQEEDMSRSST 1610 HS PQ + RS++ Sbjct: 245 --HSQPQGHRLLRSTS 258
>Q5F489:TAF3_CHICK Transcription initiation factor TFIID subunit 3 - Gallus gallus| (Chicken) Length = 930 Score = 32.3 bits (72), Expect = 7.6 Identities = 22/76 (28%), Positives = 29/76 (38%) Frame = +3 Query: 1386 PHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTCGS 1565 P K T V R P+P P V P P+P P + V A + P S G Sbjct: 781 PEAKPATPVSRPKTPPPVPSPVPAPVHVTPPPAPVPAPPQPTVSPALLPPASPAVSAAGG 840 Query: 1566 SHSPPQEEDMSRSSTF 1613 S +P + ST+ Sbjct: 841 SKAPVRSVVTETVSTY 856
>P54220:AROA_PASHA 3-phosphoshikimate 1-carboxyvinyltransferase - Pasteurella| haemolytica (Mannheimia haemolytica) Length = 432 Score = 32.3 bits (72), Expect = 7.6 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 5/100 (5%) Frame = +2 Query: 149 KATFMIPDVKNMATSRACNLSVILIRCASQGQA-----GENNCSGDHVEASALRKLEGKC 313 K ++ P + A + S L A +G+ G+ + GD + A L K+ K Sbjct: 232 KQGYVAPQGNYLVEGDASSASYFLASGAIKGKVKVTGIGKKSIQGDRLFADVLEKMGAKI 291 Query: 314 FWGKIPINLLGSCLENCVTLNLGHTVELASTVTMSPSFLE 433 WG+ I S L+ V +++ H + A T+ + F E Sbjct: 292 TWGEDFIQAEQSPLKG-VDMDMNHIPDAAMTIATTALFAE 330
>Q8WV24:PHLA1_HUMAN Pleckstrin homology-like domain family A member 1 - Homo sapiens| (Human) Length = 259 Score = 32.0 bits (71), Expect = 9.9 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +3 Query: 1383 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSST 1556 HPHP + P HP PHP ++ P HP PH + P H + RS++ Sbjct: 211 HPHPHPHSHPHSHPHPHPHPHPHQI-----PHPHPQPHSQ-------PHGHRLLRSTS 256
>Q9UPQ9:TNC6B_HUMAN Trinucleotide repeat-containing 6B protein - Homo sapiens (Human)| Length = 1723 Score = 32.0 bits (71), Expect = 9.9 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = -1 Query: 1581 GVGNGMIHRCSIGEWDDPQVLDRLTSSWGGEWDDPQVLDRLTSSWGGEWDDP 1426 G GN M S GEW P D L GEW P + T +W + P Sbjct: 497 GEGNKMTSGVSQGEWKQPTGSDELKI---GEWSGPNQPNSSTGAWDNQKGHP 545 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 380,581,466 Number of extensions: 9040177 Number of successful extensions: 21668 Number of sequences better than 10.0: 17 Number of HSP's gapped: 21482 Number of HSP's successfully gapped: 24 Length of query: 671 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 551 Effective length of database: 67,771,039 Effective search space: 37341842489 Effective search space used: 37341842489 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
