| Clone Name | FLbaf61h05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 76435 ctgctcttcctcgccgccacctg 76457
>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 Length = 172281 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 88589 ctgctcttcctcgccgccacctg 88611
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 46.1 bits (23), Expect = 0.35 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 58 ggcgactagggtt-cccctcgcgccgccaccccct 91 ||||||||||||| |||| |||||||||||||||| Sbjct: 45305 ggcgactagggtttccccccgcgccgccaccccct 45339
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 76319 ctgctcttcctcgccgccacctg 76341
>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome Length = 171823 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 76301 ctgctcttcctcgccgccacctg 76323
>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and the sequences from Raji of the large deletion found in B95-8 Length = 184113 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 88589 ctgctcttcctcgccgccacctg 88611
>gb|M10593.1|HS4ENVGP Epstein Barr virus major outer envelope glycoprotein genes gp350 and gp220, complete cds Length = 5931 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 4578 ctgctcttcctcgccgccacctg 4556
>gb|L07923.1|HS4GP340B Epstein-Barr virus glycoprotein 340 (BLLF1) gene and BLLF2 gene, complete cds's; dUTPase (BLLF3) gene, 5' end Length = 4988 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 ctgctcttcctcgccgccacctg 118 ||||||||||||||||||||||| Sbjct: 938 ctgctcttcctcgccgccacctg 960
>ref|XM_513768.2| PREDICTED: Pan troglodytes similar to Spx protein, transcript variant 4 (LOC457265), mRNA Length = 2114 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1156 aggcgagagggaagggtccctctgcg 1181 ||||||||||||||| |||||||||| Sbjct: 160 aggcgagagggaaggctccctctgcg 185
>gb|AC149594.2| Xenopus tropicalis chromosome CH216-62P2, complete sequence Length = 167602 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 ctgctagtgtctcgcagacggcggat 429 ||||||||||||||||||||| |||| Sbjct: 45134 ctgctagtgtctcgcagacggaggat 45159
>dbj|AK097315.1| Homo sapiens cDNA FLJ39996 fis, clone STOMA2002166, highly similar to SPLICEOSOME ASSOCIATED PROTEIN 49 Length = 2084 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1156 aggcgagagggaagggtccctctgcg 1181 ||||||||||||||| |||||||||| Sbjct: 131 aggcgagagggaaggctccctctgcg 156
>emb|AL590487.20| Human DNA sequence from clone RP11-212K13 on chromosome 1 Contains the 5' end of the SF3B4 gene for splicing factor 3b, subunit 4, 49kDa, the gene for cisplatin resistance associated (CRA) and the 3' end of the ZA20D1 gene for zinc finger, A20 domain containing 1, complete sequence Length = 93586 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1156 aggcgagagggaagggtccctctgcg 1181 ||||||||||||||| |||||||||| Sbjct: 3310 aggcgagagggaaggctccctctgcg 3285
>gb|AC146078.3| Pan troglodytes BAC clone RP43-45C11 from 7, complete sequence Length = 53091 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1337 atgtttcttttcttttgtgct 1357 ||||||||||||||||||||| Sbjct: 6966 atgtttcttttcttttgtgct 6946
>gb|AC108010.4| Homo sapiens BAC clone RP13-489A5 from 7, complete sequence Length = 30190 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1337 atgtttcttttcttttgtgct 1357 ||||||||||||||||||||| Sbjct: 19129 atgtttcttttcttttgtgct 19149
>gb|AC080038.5| Homo sapiens chromosome 17, clone CTD-3035K23, complete sequence Length = 219122 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1337 atgtttcttttcttttgtgct 1357 ||||||||||||||||||||| Sbjct: 170707 atgtttcttttcttttgtgct 170687
>gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, complete sequence Length = 174133 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1337 atgtttcttttcttttgtgct 1357 ||||||||||||||||||||| Sbjct: 49921 atgtttcttttcttttgtgct 49941
>gb|AC018636.4|AC018636 Homo sapiens chromosome 7 clone RP11-20F2, complete sequence Length = 167592 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1337 atgtttcttttcttttgtgct 1357 ||||||||||||||||||||| Sbjct: 150786 atgtttcttttcttttgtgct 150806
>gb|AC008026.7| Homo sapiens chromosome 17, clone RP11-464D20, complete sequence Length = 220184 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1337 atgtttcttttcttttgtgct 1357 ||||||||||||||||||||| Sbjct: 7230 atgtttcttttcttttgtgct 7210
>gb|AC152941.2| Ornithorhynchus anatinus chromosome UNK clone OABb-24M14, complete sequence Length = 145914 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1340 tttcttttcttttgtgcttgt 1360 ||||||||||||||||||||| Sbjct: 119131 tttcttttcttttgtgcttgt 119111 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 226,645,629 Number of extensions: 12334006 Number of successful extensions: 230074 Number of sequences better than 10.0: 19 Number of HSP's gapped: 230074 Number of HSP's successfully gapped: 19 Length of query: 1456 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1433 Effective length of database: 18,503,978,556 Effective search space: 26516201270748 Effective search space used: 26516201270748 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)