| Clone Name | FLbaf63l09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1059 atgcataataaaaatgcaaaattattt 1085 ||||| ||||||||||||||||||||| Sbjct: 22093591 atgcacaataaaaatgcaaaattattt 22093565
>gb|AC150573.4| Bos taurus BAC CH240-238N22 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 163445 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1066 ataaaaatgcaaaattatttgccattt 1092 |||||||||||||||||| |||||||| Sbjct: 35050 ataaaaatgcaaaattatgtgccattt 35024
>gb|AC008211.10| Drosophila melanogaster clone BACR08N16, complete sequence Length = 181904 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1059 atgcataataaaaatgcaaaattattt 1085 ||||| ||||||||||||||||||||| Sbjct: 28183 atgcacaataaaaatgcaaaattattt 28209
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 979 tcttttttcggacagagggagta 1001 ||||||||||||||||||||||| Sbjct: 13110248 tcttttttcggacagagggagta 13110270 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 550 gcgtagccgctgctactggggctggg 575 |||||||||||||| ||||||||||| Sbjct: 43117550 gcgtagccgctgctgctggggctggg 43117575
>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone BACR19L21, complete sequence Length = 162876 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1059 atgcataataaaaatgcaaaattattt 1085 ||||| ||||||||||||||||||||| Sbjct: 20064 atgcacaataaaaatgcaaaattattt 20038
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Minus Query: 697 cctcctcggggatctcgtggccggcga 723 ||||||||||||||||||| ||||||| Sbjct: 1313287 cctcctcggggatctcgtgcccggcga 1313261
>ref|NM_001011623.1| Apis mellifera metabotropic glutamate receptor B (Glurb), mRNA Length = 3376 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 ggggtgccggcgttggaggcgatgctg 534 ||||||| ||||||||||||||||||| Sbjct: 575 ggggtgcaggcgttggaggcgatgctg 601
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 979 tcttttttcggacagagggagta 1001 ||||||||||||||||||||||| Sbjct: 85969 tcttttttcggacagagggagta 85991
>dbj|AB161182.1| Apis mellifera AmGluRB mRNA for metabotropic glutamate receptor, complete cds Length = 3672 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 ggggtgccggcgttggaggcgatgctg 534 ||||||| ||||||||||||||||||| Sbjct: 615 ggggtgcaggcgttggaggcgatgctg 641
>gb|AY946886.1| Oryza sativa microRNA MIR468g-5-as precursor, gene, partial sequence Length = 150 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 979 tcttttttcggacagagggagta 1001 ||||||||||||||||||||||| Sbjct: 26 tcttttttcggacagagggagta 4
>ref|NM_001052098.1| Oryza sativa (japonica cultivar-group) Os01g0976000 (Os01g0976000) mRNA, partial cds Length = 2010 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 550 gcgtagccgctgctactggggctggg 575 |||||||||||||| ||||||||||| Sbjct: 334 gcgtagccgctgctgctggggctggg 309
>ref|XM_001169380.1| PREDICTED: Pan troglodytes hedgehog acyltransferase, transcript variant 5 (HHAT), mRNA Length = 3638 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 920 gatgcagcagcaggagcatgac 941
>ref|XM_001169359.1| PREDICTED: Pan troglodytes hedgehog acyltransferase, transcript variant 4 (HHAT), mRNA Length = 3633 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 915 gatgcagcagcaggagcatgac 936
>ref|XM_001169314.1| PREDICTED: Pan troglodytes hedgehog acyltransferase, transcript variant 3 (HHAT), mRNA Length = 1699 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 860 gatgcagcagcaggagcatgac 881
>ref|XM_525054.2| PREDICTED: Pan troglodytes hedgehog acyltransferase, transcript variant 6 (HHAT), mRNA Length = 1632 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 793 gatgcagcagcaggagcatgac 814
>ref|XM_001169240.1| PREDICTED: Pan troglodytes hedgehog acyltransferase, transcript variant 1 (HHAT), mRNA Length = 1718 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 920 gatgcagcagcaggagcatgac 941
>ref|XM_001169263.1| PREDICTED: Pan troglodytes hedgehog acyltransferase, transcript variant 2 (HHAT), mRNA Length = 2106 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 1308 gatgcagcagcaggagcatgac 1329
>gb|BC117130.1| Homo sapiens hedgehog acyltransferase, mRNA (cDNA clone MGC:150739 IMAGE:40125681), complete cds Length = 1554 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 715 gatgcagcagcaggagcatgac 736
>ref|NM_018194.1| Homo sapiens hedgehog acyltransferase (HHAT), mRNA dbj|AK001586.1| Homo sapiens cDNA FLJ10724 fis, clone NT2RP3001176 Length = 3598 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 880 gatgcagcagcaggagcatgac 901
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 981 ttttttcggacagagggagtatgtgggaagacac 1014 |||||| |||| |||||||||||| ||||||||| Sbjct: 20824862 ttttttaggacggagggagtatgttggaagacac 20824895
>emb|AL034351.1|HS879K22 Human DNA sequence from clone RP5-879K22 on chromosome 1q32.1-41 Contains part of the gene for melanoma antigen recognized by T cells 2 protein (MART2), complete sequence Length = 137678 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 68926 gatgcagcagcaggagcatgac 68905
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence Length = 209322 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 caccatcttctctccctcccagatcc 117 |||| ||||||||||||||||||||| Sbjct: 139983 caccctcttctctccctcccagatcc 140008
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 550 gcgtagccgctgctactggggctggg 575 |||||||||||||| ||||||||||| Sbjct: 114579 gcgtagccgctgctgctggggctggg 114604
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 550 gcgtagccgctgctactggggctggg 575 |||||||||||||| ||||||||||| Sbjct: 5005 gcgtagccgctgctgctggggctggg 5030
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 981 ttttttcggacagagggagtatgtgggaagacac 1014 |||||| |||| |||||||||||| ||||||||| Sbjct: 17088 ttttttaggacggagggagtatgttggaagacac 17121
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 981 ttttttcggacagagggagtatgtgggaagacac 1014 |||||| |||| |||||||||||| ||||||||| Sbjct: 99891 ttttttaggacggagggagtatgttggaagacac 99924
>dbj|AK067175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098G13, full insert sequence Length = 2014 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 550 gcgtagccgctgctactggggctggg 575 |||||||||||||| ||||||||||| Sbjct: 338 gcgtagccgctgctgctggggctggg 313
>gb|AY946885.1| Oryza sativa microRNA MIR468g-5 precursor, gene, partial sequence Length = 150 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 979 tcttttttcggacagagggagt 1000 |||||||||||||||||||||| Sbjct: 129 tcttttttcggacagagggagt 150
>emb|AL049848.1|HS879K221 Novel human gene mapping to chomosome 1 Length = 721 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 398 gatgcagcagcaggagcatgac 419
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 685 cctcgtcctcatcctcctcggg 706 |||||||||||||||||||||| Sbjct: 30057 cctcgtcctcatcctcctcggg 30078
>gb|BC039071.1| Homo sapiens hedgehog acyltransferase, mRNA (cDNA clone MGC:34300 IMAGE:5177926), complete cds Length = 3652 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatgac 428 |||||||||||||||||||||| Sbjct: 865 gatgcagcagcaggagcatgac 886
>dbj|AK235192.1| Sus scrofa mRNA, clone:OVRM10056F05, expressed in ovary Length = 1346 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 134 gcgcgcccggacgccgacgccatggagga 162 ||||| |||||||||| |||||||||||| Sbjct: 5 gcgcggccggacgccggcgccatggagga 33
>ref|XM_001109445.1| PREDICTED: Macaca mulatta similar to hedgehog acyltransferase, transcript variant 2 (LOC712333), mRNA Length = 1718 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatga 427 ||||||||||||||||||||| Sbjct: 920 gatgcagcagcaggagcatga 940
>ref|XM_001109407.1| PREDICTED: Macaca mulatta similar to hedgehog acyltransferase, transcript variant 1 (LOC712333), mRNA Length = 1656 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gatgcagcagcaggagcatga 427 ||||||||||||||||||||| Sbjct: 858 gatgcagcagcaggagcatga 878
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ggacgccgctccacctctgcc 180 ||||||||||||||||||||| Sbjct: 724646 ggacgccgctccacctctgcc 724666 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggacgccgctccacctctgcc 222 ||||||||||||||||||||| Sbjct: 724646 ggacgccgctccacctctgcc 724666
>gb|AC133517.6| Mus musculus BAC clone RP23-136I9 from chromosome 14, complete sequence Length = 196833 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 26948 tcttctctccctcccagatcc 26928 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 100144 tcttctctccctcccagatcc 100124 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 183527 tcttctctccctcccagatcc 183507
>gb|AC156561.3| Mus musculus BAC clone RP24-264F22 from chromosome 14, complete sequence Length = 170677 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 167222 tcttctctccctcccagatcc 167242
>gb|AC166095.3| Mus musculus BAC clone RP24-494O2 from chromosome 14, complete sequence Length = 155918 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 5598 tcttctctccctcccagatcc 5578 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 84093 tcttctctccctcccagatcc 84073
>gb|DQ229136.1| Mus musculus osterix (Sp7) gene, promoter and partial cds Length = 2102 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 1791 tcttctctccctcccagatcc 1811
>gb|AC165144.2| Mus musculus BAC clone RP24-441D9 from chromosome 14, complete sequence Length = 153364 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 48262 tcttctctccctcccagatcc 48282 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 127165 tcttctctccctcccagatcc 127185
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 981 ttttttcggacagagggagtatgtg 1005 |||||| |||||||||||||||||| Sbjct: 95835 ttttttgggacagagggagtatgtg 95811
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 889 aggaagaagaagcagaggggg 909 ||||||||||||||||||||| Sbjct: 134444 aggaagaagaagcagaggggg 134464
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 981 ttttttcggacagagggagtatgtgggaa 1009 |||||| |||| ||||||||||||||||| Sbjct: 64373 tttttttggacggagggagtatgtgggaa 64401
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 889 aggaagaagaagcagaggggg 909 ||||||||||||||||||||| Sbjct: 11213 aggaagaagaagcagaggggg 11233
>gb|AC137156.3| Mus musculus BAC clone RP23-118K10 from chromosome 15, complete sequence Length = 205599 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 22961 tcttctctccctcccagatcc 22941
>gb|AC115045.13| Mus musculus chromosome 6, clone RP24-315D19, complete sequence Length = 177917 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 ggagcatcaaaagcagcagga 395 ||||||||||||||||||||| Sbjct: 45956 ggagcatcaaaagcagcagga 45976
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 889 aggaagaagaagcagaggggg 909 ||||||||||||||||||||| Sbjct: 43107 aggaagaagaagcagaggggg 43127
>gb|AC161758.3| Mus musculus BAC clone RP23-455F6 from chromosome 14, complete sequence Length = 171133 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 139776 tcttctctccctcccagatcc 139756
>gb|AC161453.6| Mus musculus BAC clone RP23-403B2 from chromosome 14, complete sequence Length = 205636 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 38140 tcttctctccctcccagatcc 38160 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 163079 tcttctctccctcccagatcc 163099
>gb|AC165287.2| Mus musculus BAC clone RP24-230H12 from chromosome 14, complete sequence Length = 161004 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 110429 tcttctctccctcccagatcc 110449
>gb|AC138113.3| Mus musculus BAC clone RP24-246L19 from chromosome 14, complete sequence Length = 120512 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 78002 tcttctctccctcccagatcc 78022
>gb|AC127230.4| Mus musculus BAC clone RP24-553G19 from chromosome 14, complete sequence Length = 160625 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 13964 tcttctctccctcccagatcc 13984 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 70008 tcttctctccctcccagatcc 70028 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 148909 tcttctctccctcccagatcc 148929
>gb|AC122877.3| Mus musculus BAC clone RP23-115K1 from 14, complete sequence Length = 186549 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 27436 tcttctctccctcccagatcc 27456
>gb|AC124542.4| Mus musculus BAC clone RP23-259B10 from 12, complete sequence Length = 179046 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 tctctccctcccagatccacc 120 ||||||||||||||||||||| Sbjct: 134427 tctctccctcccagatccacc 134447
>gb|AC166080.2| Mus musculus BAC clone RP23-3N5 from chromosome 14, complete sequence Length = 198220 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 42987 tcttctctccctcccagatcc 43007 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 144974 tcttctctccctcccagatcc 144994
>gb|AC165949.2| Mus musculus BAC clone RP24-376M8 from chromosome 14, complete sequence Length = 165410 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 31748 tcttctctccctcccagatcc 31768 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 152243 tcttctctccctcccagatcc 152263
>gb|AC161275.6| Mus musculus BAC clone RP23-11E12 from chromosome 14, complete sequence Length = 237179 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 58693 tcttctctccctcccagatcc 58713 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 125663 tcttctctccctcccagatcc 125683
>gb|AC159547.4| Mus musculus 6 BAC RP23-235P6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204498 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 ggagcatcaaaagcagcagga 395 ||||||||||||||||||||| Sbjct: 181879 ggagcatcaaaagcagcagga 181899
>gb|AC164295.2| Mus musculus BAC clone RP24-252L3 from chromosome 14, complete sequence Length = 182008 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 113746 tcttctctccctcccagatcc 113726
>gb|AC163291.3| Mus musculus BAC clone RP23-263M4 from chromosome 15, complete sequence Length = 208289 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 199842 tcttctctccctcccagatcc 199822
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 atgaccggggcgccggaggcg 444 ||||||||||||||||||||| Sbjct: 2333202 atgaccggggcgccggaggcg 2333222
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1063 ataataaaaatgcaaaattat 1083 ||||||||||||||||||||| Sbjct: 53723 ataataaaaatgcaaaattat 53743
>ref|XM_753624.1| Ustilago maydis 521 hypothetical protein (UM02570.1) partial mRNA Length = 693 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ccggcagcaggcagcagcaca 358 ||||||||||||||||||||| Sbjct: 632 ccggcagcaggcagcagcaca 652
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 513 gccggcgttggaggcgatgctgctc 537 ||||||||||| ||||||||||||| Sbjct: 1740050 gccggcgttggcggcgatgctgctc 1740074
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 889 aggaagaagaagcagaggggg 909 ||||||||||||||||||||| Sbjct: 18275848 aggaagaagaagcagaggggg 18275868
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 981 ttttttcggacagagggagtatgtg 1005 |||||| |||||||||||||||||| Sbjct: 12996919 ttttttgggacagagggagtatgtg 12996895
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 980 cttttttcggacagagggagtatgt 1004 ||||||| ||||||||||||||||| Sbjct: 17608911 cttttttgggacagagggagtatgt 17608887
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 981 ttttttcggacagagggagtatgtgggaa 1009 |||||| |||| ||||||||||||||||| Sbjct: 21673197 tttttttggacggagggagtatgtgggaa 21673225
>gb|AC022489.7| Homo sapiens BAC clone RP11-671P3 from 4, complete sequence Length = 195923 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1065 aataaaaatgcaaaattattt 1085 ||||||||||||||||||||| Sbjct: 77029 aataaaaatgcaaaattattt 77049
>emb|AL691426.9| Human DNA sequence from clone RP11-787B4 on chromosome 9 Contains the 5' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and a CpG island, complete sequence Length = 182777 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 883 gaaggaaggaagaagaagcag 903 ||||||||||||||||||||| Sbjct: 157985 gaaggaaggaagaagaagcag 158005
>emb|AL451185.14| Human DNA sequence from clone RP11-136C6 on chromosome 6 Contains the KCNK5 gene for potassium channel subfamily K member 5 (TASK-2) and a CpG island, complete sequence Length = 101841 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 caccatcttctctccctccca 112 ||||||||||||||||||||| Sbjct: 34709 caccatcttctctccctccca 34689
>gb|AC154806.2| Mus musculus BAC clone RP23-78F6 from chromosome 14, complete sequence Length = 218522 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 16126 tcttctctccctcccagatcc 16146
>gb|AC156562.3| Mus musculus BAC clone RP24-286J19 from chromosome 14, complete sequence Length = 149578 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 111243 tcttctctccctcccagatcc 111263
>gb|AC010388.6| Homo sapiens chromosome 5 clone CTD-2075D11, complete sequence Length = 159766 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 caccatcttctctccctccca 112 ||||||||||||||||||||| Sbjct: 77239 caccatcttctctccctccca 77219
>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence Length = 177266 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 48136 tcttctctccctcccagatcc 48156
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 980 cttttttcggacagagggagtatgt 1004 ||||||| ||||||||||||||||| Sbjct: 85561 cttttttgggacagagggagtatgt 85537
>gb|AC160336.4| Mus musculus BAC clone RP23-48M16 from chromosome 14, complete sequence Length = 220035 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 28380 tcttctctccctcccagatcc 28360 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 111362 tcttctctccctcccagatcc 111342
>dbj|AP006256.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-433N8, complete sequence Length = 198664 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 883 gaaggaaggaagaagaagcag 903 ||||||||||||||||||||| Sbjct: 12430 gaaggaaggaagaagaagcag 12450
>gb|AC006949.8|AC006949 Mus musculus chromosome 6, clone 454_F_16, complete sequence Length = 123423 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 ggagcatcaaaagcagcagga 395 ||||||||||||||||||||| Sbjct: 96194 ggagcatcaaaagcagcagga 96214
>ref|XM_741151.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000452.04.0) partial mRNA Length = 2436 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1067 taaaaatgcaaaattatttgc 1087 ||||||||||||||||||||| Sbjct: 2289 taaaaatgcaaaattatttgc 2269
>emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chromosome 9, complete sequence Length = 199662 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 catcttctctccctcccagatccac 119 ||||||||||| ||||||||||||| Sbjct: 52731 catcttctctctctcccagatccac 52707
>gb|AC134253.4| Mus musculus BAC clone RP23-473B17 from 14, complete sequence Length = 200426 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 31638 tcttctctccctcccagatcc 31658 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 98210 tcttctctccctcccagatcc 98230 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 200161 tcttctctccctcccagatcc 200181
>gb|AC140406.3| Mus musculus BAC clone RP23-141L18 from 14, complete sequence Length = 213612 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 211719 tcttctctccctcccagatcc 211739
>gb|AC140256.3| Mus musculus BAC clone RP23-299A24 from 14, complete sequence Length = 197168 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 33906 tcttctctccctcccagatcc 33926 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 124360 tcttctctccctcccagatcc 124380
>gb|AC134455.3| Mus musculus BAC clone RP23-294B15 from 14, complete sequence Length = 186427 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 47963 tcttctctccctcccagatcc 47983 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 145339 tcttctctccctcccagatcc 145359
>emb|AL731672.12| Mouse DNA sequence from clone RP23-161L11 on chromosome X, complete sequence Length = 232171 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 caccatcttctctccctccca 112 ||||||||||||||||||||| Sbjct: 48658 caccatcttctctccctccca 48678
>emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chromosome X, complete sequence Length = 232188 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 11669 tcttctctccctcccagatcc 11649
>emb|AL844515.6| Mouse DNA sequence from clone RP23-133G5 on chromosome 2, complete sequence Length = 216464 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 69783 tcttctctccctcccagatcc 69763
>gb|AC156790.2| Mus musculus BAC clone RP24-359N3 from chromosome 14, complete sequence Length = 233946 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 96270 tcttctctccctcccagatcc 96250 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 170129 tcttctctccctcccagatcc 170109
>gb|AC170810.2| Mus musculus BAC clone RP23-273L20 from chromosome 14, complete sequence Length = 193636 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 96883 tcttctctccctcccagatcc 96903 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 187337 tcttctctccctcccagatcc 187357
>gb|AC166344.4| Mus musculus BAC clone RP24-63B17 from chromosome 14, complete sequence Length = 224882 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 21338 tcttctctccctcccagatcc 21358 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 86816 tcttctctccctcccagatcc 86836 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcttctctccctcccagatcc 117 ||||||||||||||||||||| Sbjct: 127615 tcttctctccctcccagatcc 127635
>dbj|AB020877.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium cancer , segment 9/10 Length = 100000 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 883 gaaggaaggaagaagaagcag 903 ||||||||||||||||||||| Sbjct: 90721 gaaggaaggaagaagaagcag 90741
>emb|AL645466.12| Mouse DNA sequence from clone RP23-162P18 on chromosome X, complete sequence Length = 141324 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 gaagaaaaagaatcccagctc 475 ||||||||||||||||||||| Sbjct: 51691 gaagaaaaagaatcccagctc 51671 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 201,480,978 Number of extensions: 12914317 Number of successful extensions: 333084 Number of sequences better than 10.0: 93 Number of HSP's gapped: 333084 Number of HSP's successfully gapped: 114 Length of query: 1119 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1096 Effective length of database: 18,503,978,556 Effective search space: 20280360497376 Effective search space used: 20280360497376 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)