ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63k10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066674.1| Oryza sativa (japonica cultivar-group) Os07g0588000 (Os07g0588000) mRNA, complete cds Length = 2048 Score = 1070 bits (540), Expect = 0.0 Identities = 1106/1294 (85%), Gaps = 3/1294 (0%) Strand = Plus / Plus Query: 393 tcgccatggggaagagtaagaagagcaaggtccgcggcgc---cggaggggacgaccttc 449 |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 445 tcgccatggggaagagtaagaagagcaaggtccgtggcgttggcggcggggacgacctga 504 Query: 450 tggacagcagcgacgccgacagcgtgggatcgtcgtccaccgcgctctcagatctctcca 509 | |||||||||||||||||||||||||| |||||||| || ||||| || ||||| |||| Sbjct: 505 tcgacagcagcgacgccgacagcgtgggctcgtcgtcgacggcgctgtcggatctatcca 564 Query: 510 tctcgtacgccaccgagaacgtcaactcgcacgagtttgttctcgacaagtacatcgacg 569 | |||||||| |||||| ||||| |||||| ||||| || ||||||||||||||||| | Sbjct: 565 tgtcgtacgctaccgagcacgtcggctcgcaggagttcgtcctcgacaagtacatcgatg 624 Query: 570 ctctctacgagaagagggggtctacaagagaggcagcgttggcttcgttggttgatgctt 629 ||||||| ||||||||||||||||| || || || || | || |||||||||||| Sbjct: 625 ctctctatgagaagagggggtctaccagggaagccgcactctctcaactggttgatgctt 684 Query: 630 tcgaaagttttatgcttgatggtcttgttgagaacaaatatgccactctactgagtctat 689 | ||||| || || ||| |||||||||| ||||||||||||||||| || |||||||| | Sbjct: 685 ttgaaagcttcattcttcatggtcttgtggagaacaaatatgccaccctgctgagtctgt 744 Query: 690 tcaatacttcgatcaagaagggatctatcaaggaggcttgcctggcatctcgtgccattg 749 |||| | |||||| ||||||||||||| || |||||||| | ||||| |||||||||| Sbjct: 745 tcaacagttcgataaagaagggatctacaaaagaggcttgtttagcatcccgtgccattg 804 Query: 750 ggttactgtctattacacttggtgctgggagtagctcacatgaaacaatggtagactcac 809 | | | | ||||| ||||||||||||| ||||||||||||| ||||| || |||| Sbjct: 805 gtcttttagcccttacagttggtgctgggagcagctcacatgaaataatggaggagtcac 864 Query: 810 atccacagctttctaaggtccttcaaacctggtcggatgcttcaaagatgatctctgctc 869 || |||| ||||||| |||||||||||| ||| | |||||||| |||||||| || || | Sbjct: 865 atgcacaactttctagggtccttcaaacttggccagatgcttccaagatgatttcggcac 924 Query: 870 ttgagtgcttggccatcatcacatttgttggtgcaactgatctggctgaaacagagttat 929 |||| |||||||| | | |||||||||||||| ||||| | |||||||| ||||||| Sbjct: 925 ttgattgcttggctgtggtgacatttgttggtgctgctgatttagctgaaactgagttat 984 Query: 930 ctttgaaagccatgtgggatgtgattcatccaaaatcaggttcaaatgttggtactgtcc 989 |||||||||| |||||||||||||||||||||||||||||||||||||| || | | ||| Sbjct: 985 ctttgaaagctatgtgggatgtgattcatccaaaatcaggttcaaatgtgggaattatcc 1044 Query: 990 ggaaaccaaagccacctgtgttagcagctgctctatctgcatggacgtttctgctcacaa 1049 | ||||||| ||| |||||||||||||||||| ||||||| ||| | ||||| || |||| Sbjct: 1045 gtaaaccaaggccccctgtgttagcagctgctatatctgcctgggcatttcttcttacaa 1104 Query: 1050 ctattggttcatagcggataaacactgatagttggaaggagccaatcgcgtttctctcta 1109 |||||||||||| | ||||||| ||||||||||||| ||||| || || |||||||||| Sbjct: 1105 ctattggttcatggaggataaatgctgatagttggaaagagcctattgcatttctctcta 1164 Query: 1110 ctcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagcattagctttgt 1169 ||||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1165 ctcttcttggtgcggaggatcgtgctgttcgaatggctgcgggtgaagcattagctttgt 1224 Query: 1170 gctttgagctaaatctacttgatgtctccccttctgaagacgatgatgatgacactggag 1229 |||||||||||||| | ||||| || ||| | ||||| ||||||| ||| | ||||| Sbjct: 1225 gctttgagctaaatttgcttgacgtttcctttggagaagatgatgatgttgagaatggag 1284 Query: 1230 tacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaagccaagatag 1289 | ||| | |||||||| | ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1285 gaactgttggttctaagagtaaacttttcctggatatgcaagctttgaaagccaaaatat 1344 Query: 1290 ctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagacaagaaaaatc 1349 | |||||||||| |||||||| |||||||||||| ||||||||||| |||||||||| Sbjct: 1345 caagtcttgcctccaatctctcaatggaggcagggggtaaaggtgcagataagaaaaatc 1404 Query: 1350 tttctgaccaaagagatctgtttcaacggattttggattttgtcaagtatggtgagtgcc 1409 || |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1405 ttactgaccaaagagatctgtttcaacggatcttggattttgttaagtatggtgagtgcc 1464 Query: 1410 ctgaagaatcactgaagattgctggaaaacgtgatgttctaagggttgcatcatggtctg 1469 |||||||||| | |||||| | ||||| ||||| ||| ||||||| |||||||||||| Sbjct: 1465 ctgaagaatctgttaagatttcaggaaagcgtgacgttttaagggtgtcatcatggtctg 1524 Query: 1470 aattgattcagttgaacttcttcaagcgtttcctcgggagaggcttcctgaagcatgtgc 1529 |||||||||||||||||||||| | ||| || || |||||||||||||| |||||||||| Sbjct: 1525 aattgattcagttgaacttcttgaggcggtttcttgggagaggcttcctcaagcatgtgc 1584 Query: 1530 aggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggctgaaacgctgt 1589 |||| |||||||||||||||||| | || |||| ||| ||||||| |||||||| |||| Sbjct: 1585 aggagaatggacttcttcaagatgtgtttgacattaagactgacaaagctgaaactctgt 1644 Query: 1590 catcgaatgacaagaaaatctttagatctggagaagagaaaggaagagctctgaagctga 1649 |||| | ||| ||||||||||| || ||||| |||||||||||||||||||| ||| ||| Sbjct: 1645 catccactgataagaaaatcttcaggtctggtgaagagaaaggaagagctctaaagttga 1704 Query: 1650 acaaggatcgtcgtttggcacaggagaggaagaa 1683 ||||||| || ||||| || |||||||||||||| Sbjct: 1705 acaaggaccgccgtttagcccaggagaggaagaa 1738 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 157 ccgaaaccctcaagaacaacccctgcttctgcttctgct 195 ||||| ||||||||||||||||||||||||||||||||| Sbjct: 186 ccgaacccctcaagaacaacccctgcttctgcttctgct 224
>dbj|AK099482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G13, full insert sequence Length = 2049 Score = 1070 bits (540), Expect = 0.0 Identities = 1106/1294 (85%), Gaps = 3/1294 (0%) Strand = Plus / Plus Query: 393 tcgccatggggaagagtaagaagagcaaggtccgcggcgc---cggaggggacgaccttc 449 |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 446 tcgccatggggaagagtaagaagagcaaggtccgtggcgttggcggcggggacgacctga 505 Query: 450 tggacagcagcgacgccgacagcgtgggatcgtcgtccaccgcgctctcagatctctcca 509 | |||||||||||||||||||||||||| |||||||| || ||||| || ||||| |||| Sbjct: 506 tcgacagcagcgacgccgacagcgtgggctcgtcgtcgacggcgctgtcggatctatcca 565 Query: 510 tctcgtacgccaccgagaacgtcaactcgcacgagtttgttctcgacaagtacatcgacg 569 | |||||||| |||||| ||||| |||||| ||||| || ||||||||||||||||| | Sbjct: 566 tgtcgtacgctaccgagcacgtcggctcgcaggagttcgtcctcgacaagtacatcgatg 625 Query: 570 ctctctacgagaagagggggtctacaagagaggcagcgttggcttcgttggttgatgctt 629 ||||||| ||||||||||||||||| || || || || | || |||||||||||| Sbjct: 626 ctctctatgagaagagggggtctaccagggaagccgcactctctcaactggttgatgctt 685 Query: 630 tcgaaagttttatgcttgatggtcttgttgagaacaaatatgccactctactgagtctat 689 | ||||| || || ||| |||||||||| ||||||||||||||||| || |||||||| | Sbjct: 686 ttgaaagcttcattcttcatggtcttgtggagaacaaatatgccaccctgctgagtctgt 745 Query: 690 tcaatacttcgatcaagaagggatctatcaaggaggcttgcctggcatctcgtgccattg 749 |||| | |||||| ||||||||||||| || |||||||| | ||||| |||||||||| Sbjct: 746 tcaacagttcgataaagaagggatctacaaaagaggcttgtttagcatcccgtgccattg 805 Query: 750 ggttactgtctattacacttggtgctgggagtagctcacatgaaacaatggtagactcac 809 | | | | ||||| ||||||||||||| ||||||||||||| ||||| || |||| Sbjct: 806 gtcttttagcccttacagttggtgctgggagcagctcacatgaaataatggaggagtcac 865 Query: 810 atccacagctttctaaggtccttcaaacctggtcggatgcttcaaagatgatctctgctc 869 || |||| ||||||| |||||||||||| ||| | |||||||| |||||||| || || | Sbjct: 866 atgcacaactttctagggtccttcaaacttggccagatgcttccaagatgatttcggcac 925 Query: 870 ttgagtgcttggccatcatcacatttgttggtgcaactgatctggctgaaacagagttat 929 |||| |||||||| | | |||||||||||||| ||||| | |||||||| ||||||| Sbjct: 926 ttgattgcttggctgtggtgacatttgttggtgctgctgatttagctgaaactgagttat 985 Query: 930 ctttgaaagccatgtgggatgtgattcatccaaaatcaggttcaaatgttggtactgtcc 989 |||||||||| |||||||||||||||||||||||||||||||||||||| || | | ||| Sbjct: 986 ctttgaaagctatgtgggatgtgattcatccaaaatcaggttcaaatgtgggaattatcc 1045 Query: 990 ggaaaccaaagccacctgtgttagcagctgctctatctgcatggacgtttctgctcacaa 1049 | ||||||| ||| |||||||||||||||||| ||||||| ||| | ||||| || |||| Sbjct: 1046 gtaaaccaaggccccctgtgttagcagctgctatatctgcctgggcatttcttcttacaa 1105 Query: 1050 ctattggttcatagcggataaacactgatagttggaaggagccaatcgcgtttctctcta 1109 |||||||||||| | ||||||| ||||||||||||| ||||| || || |||||||||| Sbjct: 1106 ctattggttcatggaggataaatgctgatagttggaaagagcctattgcatttctctcta 1165 Query: 1110 ctcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagcattagctttgt 1169 ||||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1166 ctcttcttggtgcggaggatcgtgctgttcgaatggctgcgggtgaagcattagctttgt 1225 Query: 1170 gctttgagctaaatctacttgatgtctccccttctgaagacgatgatgatgacactggag 1229 |||||||||||||| | ||||| || ||| | ||||| ||||||| ||| | ||||| Sbjct: 1226 gctttgagctaaatttgcttgacgtttcctttggagaagatgatgatgttgagaatggag 1285 Query: 1230 tacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaagccaagatag 1289 | ||| | |||||||| | ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1286 gaactgttggttctaagagtaaacttttcctggatatgcaagctttgaaagccaaaatat 1345 Query: 1290 ctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagacaagaaaaatc 1349 | |||||||||| |||||||| |||||||||||| ||||||||||| |||||||||| Sbjct: 1346 caagtcttgcctccaatctctcaatggaggcagggggtaaaggtgcagataagaaaaatc 1405 Query: 1350 tttctgaccaaagagatctgtttcaacggattttggattttgtcaagtatggtgagtgcc 1409 || |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1406 ttactgaccaaagagatctgtttcaacggatcttggattttgttaagtatggtgagtgcc 1465 Query: 1410 ctgaagaatcactgaagattgctggaaaacgtgatgttctaagggttgcatcatggtctg 1469 |||||||||| | |||||| | ||||| ||||| ||| ||||||| |||||||||||| Sbjct: 1466 ctgaagaatctgttaagatttcaggaaagcgtgacgttttaagggtgtcatcatggtctg 1525 Query: 1470 aattgattcagttgaacttcttcaagcgtttcctcgggagaggcttcctgaagcatgtgc 1529 |||||||||||||||||||||| | ||| || || |||||||||||||| |||||||||| Sbjct: 1526 aattgattcagttgaacttcttgaggcggtttcttgggagaggcttcctcaagcatgtgc 1585 Query: 1530 aggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggctgaaacgctgt 1589 |||| |||||||||||||||||| | || |||| ||| ||||||| |||||||| |||| Sbjct: 1586 aggagaatggacttcttcaagatgtgtttgacattaagactgacaaagctgaaactctgt 1645 Query: 1590 catcgaatgacaagaaaatctttagatctggagaagagaaaggaagagctctgaagctga 1649 |||| | ||| ||||||||||| || ||||| |||||||||||||||||||| ||| ||| Sbjct: 1646 catccactgataagaaaatcttcaggtctggtgaagagaaaggaagagctctaaagttga 1705 Query: 1650 acaaggatcgtcgtttggcacaggagaggaagaa 1683 ||||||| || ||||| || |||||||||||||| Sbjct: 1706 acaaggaccgccgtttagcccaggagaggaagaa 1739 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 157 ccgaaaccctcaagaacaacccctgcttctgcttctgct 195 ||||| ||||||||||||||||||||||||||||||||| Sbjct: 187 ccgaacccctcaagaacaacccctgcttctgcttctgct 225
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 287 bits (145), Expect = 7e-74 Identities = 256/293 (87%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||||||||||||||| || || ||||||||||||||||| |||||||| ||||||||| Sbjct: 23875451 tttctctctactcttcttggtgcggaggatcgtgctgttcgaatggctgcgggtgaagca 23875510 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 |||||||||||||||||||||||| | ||||| || ||| | ||||| ||||||| | Sbjct: 23875511 ttagctttgtgctttgagctaaatttgcttgacgtttcctttggagaagatgatgatgtt 23875570 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 || | ||||| | ||| | |||||||| | ||||||||||||||||||||||| |||||| Sbjct: 23875571 gagaatggaggaactgttggttctaagagtaaacttttcctggatatgcaagctttgaaa 23875630 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| | |||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 23875631 gccaaaatatcaagtcttgcctccaatctctcaatggaggcagggggtaaaggtgcagat 23875690 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgt 1392 |||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 23875691 aagaaaaatcttactgaccaaagagatctgtttcaacggatcttggattttgt 23875743 Score = 159 bits (80), Expect = 5e-35 Identities = 157/182 (86%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 408 gtaagaagagcaaggtccgcggcgc---cggaggggacgaccttctggacagcagcgacg 464 ||||||||||||||||||| |||| ||| ||||||||||| | ||||||||||||| Sbjct: 23872922 gtaagaagagcaaggtccgtggcgttggcggcggggacgacctgatcgacagcagcgacg 23872981 Query: 465 ccgacagcgtgggatcgtcgtccaccgcgctctcagatctctccatctcgtacgccaccg 524 ||||||||||||| |||||||| || ||||| || ||||| ||||| |||||||| |||| Sbjct: 23872982 ccgacagcgtgggctcgtcgtcgacggcgctgtcggatctatccatgtcgtacgctaccg 23873041 Query: 525 agaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctacgagaaga 584 || ||||| |||||| ||||| || ||||||||||||||||| |||||||| ||||||| Sbjct: 23873042 agcacgtcggctcgcaggagttcgtcctcgacaagtacatcgatgctctctatgagaaga 23873101 Query: 585 gg 586 || Sbjct: 23873102 gg 23873103 Score = 129 bits (65), Expect = 4e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 890 acatttgttggtgcaactgatctggctgaaacagagttatctttgaaagccatgtgggat 949 |||||||||||||| ||||| | |||||||| ||||||||||||||||| ||||||||| Sbjct: 23875039 acatttgttggtgctgctgatttagctgaaactgagttatctttgaaagctatgtgggat 23875098 Query: 950 gtgattcatccaaaatcaggttcaaatgt 978 ||||||||||||||||||||||||||||| Sbjct: 23875099 gtgattcatccaaaatcaggttcaaatgt 23875127 Score = 95.6 bits (48), Expect = 6e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 762 ttacacttggtgctgggagtagctcacatgaaacaatggtagactcacatccacagcttt 821 ||||| ||||||||||||| ||||||||||||| ||||| || |||||| |||| |||| Sbjct: 23874828 ttacagttggtgctgggagcagctcacatgaaataatggaggagtcacatgcacaacttt 23874887 Query: 822 ctaaggtccttcaaacctggtcggatgcttcaaagatgat 861 ||| |||||||||||| ||| | |||||||| |||||||| Sbjct: 23874888 ctagggtccttcaaacttggccagatgcttccaagatgat 23874927 Score = 95.6 bits (48), Expect = 6e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 987 tccggaaaccaaagccacctgtgttagcagctgctctatctgcatggacgtttctgctca 1046 |||| ||||||| ||| |||||||||||||||||| ||||||| ||| | ||||| || | Sbjct: 23875242 tccgtaaaccaaggccccctgtgttagcagctgctatatctgcctgggcatttcttctta 23875301 Query: 1047 caactattggttcatagcggataaacactgatagttggaa 1086 ||||||||||||||| | ||||||| ||||||||||||| Sbjct: 23875302 caactattggttcatggaggataaatgctgatagttggaa 23875341 Score = 91.7 bits (46), Expect = 9e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 1395 agtatggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaaggg 1454 ||||||||||||||||||||||||| | |||||| | ||||| ||||| ||| |||||| Sbjct: 23875832 agtatggtgagtgccctgaagaatctgttaagatttcaggaaagcgtgacgttttaaggg 23875891 Query: 1455 ttgcatcatggtctgaattgattcag 1480 | ||||||||||||||||||||||| Sbjct: 23875892 tgtcatcatggtctgaattgattcag 23875917 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1602 agaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgtc 1661 |||||||||| || ||||| |||||||||||||||||||| ||| |||||||||| || | Sbjct: 23876821 agaaaatcttcaggtctggtgaagagaaaggaagagctctaaagttgaacaaggaccgcc 23876880 Query: 1662 gttt 1665 |||| Sbjct: 23876881 gttt 23876884 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 157 ccgaaaccctcaagaacaacccctgcttctgcttctgct 195 ||||| ||||||||||||||||||||||||||||||||| Sbjct: 23872559 ccgaacccctcaagaacaacccctgcttctgcttctgct 23872597 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Plus Query: 667 atatgccactctactgagtctattcaatacttcgatcaagaagggatctatcaaggaggc 726 ||||||||| || |||||||| ||||| | |||||| ||||||||||||| || ||||| Sbjct: 23874643 atatgccaccctgctgagtctgttcaacagttcgataaagaagggatctacaaaagaggc 23874702 Query: 727 ttgcctggcatctcgtgccattgg 750 ||| | ||||| ||||||||||| Sbjct: 23874703 ttgtttagcatcccgtgccattgg 23874726 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1527 tgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggctgaaacgc 1586 ||||||| |||||||||||||||||| | || |||| ||| ||||||| |||||||| | Sbjct: 23876138 tgcaggagaatggacttcttcaagatgtgtttgacattaagactgacaaagctgaaactc 23876197 Query: 1587 tgtcatc 1593 ||||||| Sbjct: 23876198 tgtcatc 23876204 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1479 agttgaacttcttcaagcgtttcctcgggagaggcttcctgaagcatgtgcagg 1532 ||||||||||||| | ||| || || |||||||||||||| ||||||||||||| Sbjct: 23876000 agttgaacttcttgaggcggtttcttgggagaggcttcctcaagcatgtgcagg 23876053 Score = 50.1 bits (25), Expect = 0.030 Identities = 43/49 (87%) Strand = Plus / Plus Query: 618 tggttgatgctttcgaaagttttatgcttgatggtcttgttgagaacaa 666 ||||||||||||| ||||| || || ||| |||||||||| |||||||| Sbjct: 23874346 tggttgatgcttttgaaagcttcattcttcatggtcttgtggagaacaa 23874394 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 ctccctcctccccgtccgcctc 32 |||||||||||||||||||||| Sbjct: 20207712 ctccctcctccccgtccgcctc 20207733
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 287 bits (145), Expect = 7e-74 Identities = 256/293 (87%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||||||||||||||| || || ||||||||||||||||| |||||||| ||||||||| Sbjct: 30378 tttctctctactcttcttggtgcggaggatcgtgctgttcgaatggctgcgggtgaagca 30437 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 |||||||||||||||||||||||| | ||||| || ||| | ||||| ||||||| | Sbjct: 30438 ttagctttgtgctttgagctaaatttgcttgacgtttcctttggagaagatgatgatgtt 30497 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 || | ||||| | ||| | |||||||| | ||||||||||||||||||||||| |||||| Sbjct: 30498 gagaatggaggaactgttggttctaagagtaaacttttcctggatatgcaagctttgaaa 30557 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| | |||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 30558 gccaaaatatcaagtcttgcctccaatctctcaatggaggcagggggtaaaggtgcagat 30617 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgt 1392 |||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 30618 aagaaaaatcttactgaccaaagagatctgtttcaacggatcttggattttgt 30670 Score = 159 bits (80), Expect = 5e-35 Identities = 157/182 (86%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 408 gtaagaagagcaaggtccgcggcgc---cggaggggacgaccttctggacagcagcgacg 464 ||||||||||||||||||| |||| ||| ||||||||||| | ||||||||||||| Sbjct: 27849 gtaagaagagcaaggtccgtggcgttggcggcggggacgacctgatcgacagcagcgacg 27908 Query: 465 ccgacagcgtgggatcgtcgtccaccgcgctctcagatctctccatctcgtacgccaccg 524 ||||||||||||| |||||||| || ||||| || ||||| ||||| |||||||| |||| Sbjct: 27909 ccgacagcgtgggctcgtcgtcgacggcgctgtcggatctatccatgtcgtacgctaccg 27968 Query: 525 agaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctacgagaaga 584 || ||||| |||||| ||||| || ||||||||||||||||| |||||||| ||||||| Sbjct: 27969 agcacgtcggctcgcaggagttcgtcctcgacaagtacatcgatgctctctatgagaaga 28028 Query: 585 gg 586 || Sbjct: 28029 gg 28030 Score = 129 bits (65), Expect = 4e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 890 acatttgttggtgcaactgatctggctgaaacagagttatctttgaaagccatgtgggat 949 |||||||||||||| ||||| | |||||||| ||||||||||||||||| ||||||||| Sbjct: 29966 acatttgttggtgctgctgatttagctgaaactgagttatctttgaaagctatgtgggat 30025 Query: 950 gtgattcatccaaaatcaggttcaaatgt 978 ||||||||||||||||||||||||||||| Sbjct: 30026 gtgattcatccaaaatcaggttcaaatgt 30054 Score = 95.6 bits (48), Expect = 6e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 762 ttacacttggtgctgggagtagctcacatgaaacaatggtagactcacatccacagcttt 821 ||||| ||||||||||||| ||||||||||||| ||||| || |||||| |||| |||| Sbjct: 29755 ttacagttggtgctgggagcagctcacatgaaataatggaggagtcacatgcacaacttt 29814 Query: 822 ctaaggtccttcaaacctggtcggatgcttcaaagatgat 861 ||| |||||||||||| ||| | |||||||| |||||||| Sbjct: 29815 ctagggtccttcaaacttggccagatgcttccaagatgat 29854 Score = 95.6 bits (48), Expect = 6e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 987 tccggaaaccaaagccacctgtgttagcagctgctctatctgcatggacgtttctgctca 1046 |||| ||||||| ||| |||||||||||||||||| ||||||| ||| | ||||| || | Sbjct: 30169 tccgtaaaccaaggccccctgtgttagcagctgctatatctgcctgggcatttcttctta 30228 Query: 1047 caactattggttcatagcggataaacactgatagttggaa 1086 ||||||||||||||| | ||||||| ||||||||||||| Sbjct: 30229 caactattggttcatggaggataaatgctgatagttggaa 30268 Score = 91.7 bits (46), Expect = 9e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 1395 agtatggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaaggg 1454 ||||||||||||||||||||||||| | |||||| | ||||| ||||| ||| |||||| Sbjct: 30759 agtatggtgagtgccctgaagaatctgttaagatttcaggaaagcgtgacgttttaaggg 30818 Query: 1455 ttgcatcatggtctgaattgattcag 1480 | ||||||||||||||||||||||| Sbjct: 30819 tgtcatcatggtctgaattgattcag 30844 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1602 agaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgtc 1661 |||||||||| || ||||| |||||||||||||||||||| ||| |||||||||| || | Sbjct: 31748 agaaaatcttcaggtctggtgaagagaaaggaagagctctaaagttgaacaaggaccgcc 31807 Query: 1662 gttt 1665 |||| Sbjct: 31808 gttt 31811 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 157 ccgaaaccctcaagaacaacccctgcttctgcttctgct 195 ||||| ||||||||||||||||||||||||||||||||| Sbjct: 27486 ccgaacccctcaagaacaacccctgcttctgcttctgct 27524 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Plus Query: 667 atatgccactctactgagtctattcaatacttcgatcaagaagggatctatcaaggaggc 726 ||||||||| || |||||||| ||||| | |||||| ||||||||||||| || ||||| Sbjct: 29570 atatgccaccctgctgagtctgttcaacagttcgataaagaagggatctacaaaagaggc 29629 Query: 727 ttgcctggcatctcgtgccattgg 750 ||| | ||||| ||||||||||| Sbjct: 29630 ttgtttagcatcccgtgccattgg 29653 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1527 tgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggctgaaacgc 1586 ||||||| |||||||||||||||||| | || |||| ||| ||||||| |||||||| | Sbjct: 31065 tgcaggagaatggacttcttcaagatgtgtttgacattaagactgacaaagctgaaactc 31124 Query: 1587 tgtcatc 1593 ||||||| Sbjct: 31125 tgtcatc 31131 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1479 agttgaacttcttcaagcgtttcctcgggagaggcttcctgaagcatgtgcagg 1532 ||||||||||||| | ||| || || |||||||||||||| ||||||||||||| Sbjct: 30927 agttgaacttcttgaggcggtttcttgggagaggcttcctcaagcatgtgcagg 30980 Score = 50.1 bits (25), Expect = 0.030 Identities = 43/49 (87%) Strand = Plus / Plus Query: 618 tggttgatgctttcgaaagttttatgcttgatggtcttgttgagaacaa 666 ||||||||||||| ||||| || || ||| |||||||||| |||||||| Sbjct: 29273 tggttgatgcttttgaaagcttcattcttcatggtcttgtggagaacaa 29321
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 287 bits (145), Expect = 7e-74 Identities = 256/293 (87%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||||||||||||||| || || ||||||||||||||||| |||||||| ||||||||| Sbjct: 63951 tttctctctactcttcttggtgcggaggatcgtgctgttcgaatggctgcgggtgaagca 64010 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 |||||||||||||||||||||||| | ||||| || ||| | ||||| ||||||| | Sbjct: 64011 ttagctttgtgctttgagctaaatttgcttgacgtttcctttggagaagatgatgatgtt 64070 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 || | ||||| | ||| | |||||||| | ||||||||||||||||||||||| |||||| Sbjct: 64071 gagaatggaggaactgttggttctaagagtaaacttttcctggatatgcaagctttgaaa 64130 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| | |||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 64131 gccaaaatatcaagtcttgcctccaatctctcaatggaggcagggggtaaaggtgcagat 64190 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgt 1392 |||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 64191 aagaaaaatcttactgaccaaagagatctgtttcaacggatcttggattttgt 64243 Score = 159 bits (80), Expect = 5e-35 Identities = 157/182 (86%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 408 gtaagaagagcaaggtccgcggcgc---cggaggggacgaccttctggacagcagcgacg 464 ||||||||||||||||||| |||| ||| ||||||||||| | ||||||||||||| Sbjct: 61422 gtaagaagagcaaggtccgtggcgttggcggcggggacgacctgatcgacagcagcgacg 61481 Query: 465 ccgacagcgtgggatcgtcgtccaccgcgctctcagatctctccatctcgtacgccaccg 524 ||||||||||||| |||||||| || ||||| || ||||| ||||| |||||||| |||| Sbjct: 61482 ccgacagcgtgggctcgtcgtcgacggcgctgtcggatctatccatgtcgtacgctaccg 61541 Query: 525 agaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctacgagaaga 584 || ||||| |||||| ||||| || ||||||||||||||||| |||||||| ||||||| Sbjct: 61542 agcacgtcggctcgcaggagttcgtcctcgacaagtacatcgatgctctctatgagaaga 61601 Query: 585 gg 586 || Sbjct: 61602 gg 61603 Score = 129 bits (65), Expect = 4e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 890 acatttgttggtgcaactgatctggctgaaacagagttatctttgaaagccatgtgggat 949 |||||||||||||| ||||| | |||||||| ||||||||||||||||| ||||||||| Sbjct: 63539 acatttgttggtgctgctgatttagctgaaactgagttatctttgaaagctatgtgggat 63598 Query: 950 gtgattcatccaaaatcaggttcaaatgt 978 ||||||||||||||||||||||||||||| Sbjct: 63599 gtgattcatccaaaatcaggttcaaatgt 63627 Score = 95.6 bits (48), Expect = 6e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 762 ttacacttggtgctgggagtagctcacatgaaacaatggtagactcacatccacagcttt 821 ||||| ||||||||||||| ||||||||||||| ||||| || |||||| |||| |||| Sbjct: 63328 ttacagttggtgctgggagcagctcacatgaaataatggaggagtcacatgcacaacttt 63387 Query: 822 ctaaggtccttcaaacctggtcggatgcttcaaagatgat 861 ||| |||||||||||| ||| | |||||||| |||||||| Sbjct: 63388 ctagggtccttcaaacttggccagatgcttccaagatgat 63427 Score = 95.6 bits (48), Expect = 6e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 987 tccggaaaccaaagccacctgtgttagcagctgctctatctgcatggacgtttctgctca 1046 |||| ||||||| ||| |||||||||||||||||| ||||||| ||| | ||||| || | Sbjct: 63742 tccgtaaaccaaggccccctgtgttagcagctgctatatctgcctgggcatttcttctta 63801 Query: 1047 caactattggttcatagcggataaacactgatagttggaa 1086 ||||||||||||||| | ||||||| ||||||||||||| Sbjct: 63802 caactattggttcatggaggataaatgctgatagttggaa 63841 Score = 91.7 bits (46), Expect = 9e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 1395 agtatggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaaggg 1454 ||||||||||||||||||||||||| | |||||| | ||||| ||||| ||| |||||| Sbjct: 64332 agtatggtgagtgccctgaagaatctgttaagatttcaggaaagcgtgacgttttaaggg 64391 Query: 1455 ttgcatcatggtctgaattgattcag 1480 | ||||||||||||||||||||||| Sbjct: 64392 tgtcatcatggtctgaattgattcag 64417 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1602 agaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgtc 1661 |||||||||| || ||||| |||||||||||||||||||| ||| |||||||||| || | Sbjct: 65321 agaaaatcttcaggtctggtgaagagaaaggaagagctctaaagttgaacaaggaccgcc 65380 Query: 1662 gttt 1665 |||| Sbjct: 65381 gttt 65384 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 157 ccgaaaccctcaagaacaacccctgcttctgcttctgct 195 ||||| ||||||||||||||||||||||||||||||||| Sbjct: 61059 ccgaacccctcaagaacaacccctgcttctgcttctgct 61097 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Plus Query: 667 atatgccactctactgagtctattcaatacttcgatcaagaagggatctatcaaggaggc 726 ||||||||| || |||||||| ||||| | |||||| ||||||||||||| || ||||| Sbjct: 63143 atatgccaccctgctgagtctgttcaacagttcgataaagaagggatctacaaaagaggc 63202 Query: 727 ttgcctggcatctcgtgccattgg 750 ||| | ||||| ||||||||||| Sbjct: 63203 ttgtttagcatcccgtgccattgg 63226 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1527 tgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggctgaaacgc 1586 ||||||| |||||||||||||||||| | || |||| ||| ||||||| |||||||| | Sbjct: 64638 tgcaggagaatggacttcttcaagatgtgtttgacattaagactgacaaagctgaaactc 64697 Query: 1587 tgtcatc 1593 ||||||| Sbjct: 64698 tgtcatc 64704 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1479 agttgaacttcttcaagcgtttcctcgggagaggcttcctgaagcatgtgcagg 1532 ||||||||||||| | ||| || || |||||||||||||| ||||||||||||| Sbjct: 64500 agttgaacttcttgaggcggtttcttgggagaggcttcctcaagcatgtgcagg 64553 Score = 50.1 bits (25), Expect = 0.030 Identities = 43/49 (87%) Strand = Plus / Plus Query: 618 tggttgatgctttcgaaagttttatgcttgatggtcttgttgagaacaa 666 ||||||||||||| ||||| || || ||| |||||||||| |||||||| Sbjct: 62846 tggttgatgcttttgaaagcttcattcttcatggtcttgtggagaacaa 62894
>gb|AY107585.1| Zea mays PCO065045 mRNA sequence Length = 695 Score = 238 bits (120), Expect = 6e-59 Identities = 237/276 (85%) Strand = Plus / Minus Query: 1368 tgtttcaacggattttggattttgtcaagtatggtgagtgccctgaagaatcactgaaga 1427 |||||||||| || || |||||||||||||||||||| ||||||||||||||| | |||| Sbjct: 689 tgtttcaacgaatcttagattttgtcaagtatggtgaatgccctgaagaatcaatcaaga 630 Query: 1428 ttgctggaaaacgtgatgttctaagggttgcatcatggtctgaattgattcagttgaact 1487 |||||||||||||||||||| ||||||| |||| ||||||||||| || |||||||| | Sbjct: 629 ttgctggaaaacgtgatgttttaagggtgtcatcgtggtctgaattaatccagttgaatt 570 Query: 1488 tcttcaagcgtttcctcgggagaggcttcctgaagcatgtgcaggacaatggacttcttc 1547 |||| || || ||||| |||| |||||| ||||||||||||||||| ||||||||||||| Sbjct: 569 tcttaaaacggttcctggggaaaggctttctgaagcatgtgcaggagaatggacttcttc 510 Query: 1548 aagatatcttcaacatcaaggctgacaaggctgaaacgctgtcatcgaatgacaagaaaa 1607 | |||||||| |||| |||| |||||| ||||||| |||| || | ||| ||||||| Sbjct: 509 aggatatctttgacattaaggttgacaaaactgaaaccttgtcgtccactgataagaaaa 450 Query: 1608 tctttagatctggagaagagaaaggaagagctctga 1643 | ||||| |||| ||| || |||| ||||||||||| Sbjct: 449 tttttaggtctgaagaggaaaaagaaagagctctga 414
>gb|AY111058.1| Zea mays CL51637_1 mRNA sequence Length = 646 Score = 200 bits (101), Expect = 1e-47 Identities = 209/247 (84%) Strand = Plus / Minus Query: 1329 aaggtgcagacaagaaaaatctttctgaccaaagagatctgtttcaacggattttggatt 1388 |||||||||||||| ||| |||| |||||||| | |||||| |||| || |||| Sbjct: 631 aaggtgcagacaagnnnnnncttactgatcaaagagacttatttcaaaggatcttagatt 572 Query: 1389 ttgtcaagtatggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttc 1448 |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| Sbjct: 571 ttgtcaagtatggtgactgccctgaagaatcaatcaagattgctggaaaacgtgatgttt 512 Query: 1449 taagggttgcatcatggtctgaattgattcagttgaacttcttcaagcgtttcctcggga 1508 ||||||| | |||||||||||||| || |||||||| ||||| ||||| || || |||| Sbjct: 511 taagggtgtcgtcatggtctgaattaatccagttgaatttcttaaagcggtttctgggga 452 Query: 1509 gaggcttcctgaagcatgtgcaggacaatggacttcttcaagatatcttcaacatcaagg 1568 |||||| ||||||||||| ||||| |||||||||||||| ||||| || |||| |||| Sbjct: 451 aaggctttctgaagcatgttcaggagaatggacttcttcaggatatatttgacattaagg 392 Query: 1569 ctgacaa 1575 |||||| Sbjct: 391 ttgacaa 385
>emb|CT830909.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN091C16, full insert sequence Length = 1826 Score = 178 bits (90), Expect = 5e-41 Identities = 447/566 (78%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 980 tttctttctgctcttctagaagcggaggaccgtgctgtgcggatggctgctggtgaagca 1039 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 ||||| ||||||| ||| |||| || |||||||| | | | |||||| | ||| | Sbjct: 1040 ttagcactgtgcttcgagttaaaactgcttgatgttttctccaatgaagaagttgaggtg 1099 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 ||||||| || | || || |||||||| | |||||||| || |||||||||||||||| Sbjct: 1100 gacactgcagaagctagtggttctaagaaccaacttttcttgaatatgcaagcattgaag 1159 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| ||||||| | || ||||||||| ||| || ||||| | |||||| ||| Sbjct: 1160 gccaaaatatctggtctagtctataatctctctatggaagcggggggaagaggtgctgac 1219 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgtcaagtat 1399 ||||||||||| ||| |||||||| | || ||||| || | |||||| | ||| | Sbjct: 1220 aagaaaaatctgaatgatcaaagagacttattccaacgaatctcagattttattaagact 1279 Query: 1400 ggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaagggttgca 1459 |||||||||| |||||||||||| | ||||| || || | || | || |||| ||| || Sbjct: 1280 ggtgagtgccttgaagaatcacttagaattgcaggcaagcatggtattttaagagttaca 1339 Query: 1460 tcatggtctgaattgattcagttgaacttcttcaagcgtttcctcgggagaggcttcctg 1519 |||||| ||||| || |||||||||| || | ||| ||||| ||| |||| || ||| Sbjct: 1340 tcatggcgtgaatcaatacagttgaactatttgaggcggttccttgggcgaggatttctg 1399 Query: 1520 aagcatgtgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggct 1579 ||||||| || ||||||||| | || || |||||||| ||||||| || || || Sbjct: 1400 aagcatgcacaagacaatggattgctacatgatatctttgacatcaaaatggataaaact 1459 Query: 1580 gaaacgctgtcatcgaatgacaagaaaatctttagatctggagaagagaaaggaagagct 1639 |||| ||||| | | ||| |||||||||| ||| |||||||||||||||||||||||| Sbjct: 1460 gaaaacatgtcaaccactgaaaagaaaatctataggtctggagaagagaaaggaagagct 1519 Query: 1640 ctgaagctgaacaaggatcgtcgttt 1665 || ||| |||| ||||| |||||||| Sbjct: 1520 ctaaagttgaataaggagcgtcgttt 1545 Score = 149 bits (75), Expect = 4e-32 Identities = 233/283 (82%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 752 ttactgtctattacacttggtgctgggagtagctcacatgaaacaatggtagactcacat 811 |||||| | ||||||||||||||||| ||||| || ||||||| ||||| || || | | Sbjct: 632 ttactggccattacacttggtgctggaagtagttctcatgaaataatggatgaatcccgt 691 Query: 812 ccacagctttctaag-gtccttcaaacctggtcggatgcttcaaagatgatctctgctct 870 | |||||| || || ||||| ||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 692 ctgcagctt-ctgagagtcctccaaacttggcctgatgcttcaaaaatgatatctgcact 750 Query: 871 tgagtgcttggccatcatcacatttgttggtgcaactgatctggctgaaacagagttatc 930 ||| ||||| || | ||||||||||||||||||||||||| ||||||| || |||| Sbjct: 751 tgattgcttagctgttgtcacatttgttggtgcaactgatctatctgaaacccagctatc 810 Query: 931 tttgaaagccatgtgggatgtgattcatccaaaatcaggttcaaatgttggtactgtccg 990 | |||||||||| |||||||||||||| || || ||||| || |||||||| | |||| | Sbjct: 811 tatgaaagccatctgggatgtgattcaccctaagtcaggatccaatgttggaattgtcag 870 Query: 991 gaaaccaaagccacctgtgttagcagctgctctatctgcatgg 1033 ||||||||||| || |||||||||||||| | ||||||||| Sbjct: 871 aaaaccaaagcctcccttgttagcagctgctgtgtctgcatgg 913 Score = 81.8 bits (41), Expect = 9e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 518 gccaccgagaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctac 577 ||||||||| | || | |||||| || |||||||| ||||| |||||||||| |||||| Sbjct: 300 gccaccgagcaagttagctcgcaggattttgttcttgacaaatacatcgacgatctctat 359 Query: 578 gagaagagggggtctacaagagaggcagc 606 ||||||||||| || |||||||||||||| Sbjct: 360 gagaagaggggatccacaagagaggcagc 388
>emb|CT830908.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124J04, full insert sequence Length = 1719 Score = 178 bits (90), Expect = 5e-41 Identities = 447/566 (78%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 940 tttctttctgctcttctagaagcggaggaccgtgctgtgcggatggctgctggtgaagca 999 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 ||||| ||||||| ||| |||| || |||||||| | | | |||||| | ||| | Sbjct: 1000 ttagcactgtgcttcgagttaaaactgcttgatgttttctccaatgaagaagttgaggtg 1059 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 ||||||| || | || || |||||||| | |||||||| || |||||||||||||||| Sbjct: 1060 gacactgcagaagctagtggttctaagaaccaacttttcttgaatatgcaagcattgaag 1119 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| ||||||| | || ||||||||| ||| || ||||| | |||||| ||| Sbjct: 1120 gccaaaatatctggtctagtctataatctctctatggaagcggggggaagaggtgctgac 1179 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgtcaagtat 1399 ||||||||||| ||| |||||||| | || ||||| || | |||||| | ||| | Sbjct: 1180 aagaaaaatctgaatgatcaaagagacttattccaacgaatctcagattttattaagact 1239 Query: 1400 ggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaagggttgca 1459 |||||||||| |||||||||||| | ||||| || || | || | || |||| ||| || Sbjct: 1240 ggtgagtgccttgaagaatcacttagaattgcaggcaagcatggtattttaagagttaca 1299 Query: 1460 tcatggtctgaattgattcagttgaacttcttcaagcgtttcctcgggagaggcttcctg 1519 |||||| ||||| || |||||||||| || | ||| ||||| ||| |||| || ||| Sbjct: 1300 tcatggcgtgaatcaatacagttgaactatttgaggcggttccttgggcgaggatttctg 1359 Query: 1520 aagcatgtgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggct 1579 ||||||| || ||||||||| | || || |||||||| ||||||| || || || Sbjct: 1360 aagcatgcacaagacaatggattgctacatgatatctttgacatcaaaatggataaaact 1419 Query: 1580 gaaacgctgtcatcgaatgacaagaaaatctttagatctggagaagagaaaggaagagct 1639 |||| ||||| | | ||| |||||||||| ||| |||||||||||||||||||||||| Sbjct: 1420 gaaaacatgtcaaccactgaaaagaaaatctataggtctggagaagagaaaggaagagct 1479 Query: 1640 ctgaagctgaacaaggatcgtcgttt 1665 || ||| |||| ||||| |||||||| Sbjct: 1480 ctaaagttgaataaggagcgtcgttt 1505 Score = 149 bits (75), Expect = 4e-32 Identities = 233/283 (82%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 752 ttactgtctattacacttggtgctgggagtagctcacatgaaacaatggtagactcacat 811 |||||| | ||||||||||||||||| ||||| || ||||||| ||||| || || | | Sbjct: 592 ttactggccattacacttggtgctggaagtagttctcatgaaataatggatgaatcccgt 651 Query: 812 ccacagctttctaag-gtccttcaaacctggtcggatgcttcaaagatgatctctgctct 870 | |||||| || || ||||| ||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 652 ctgcagctt-ctgagagtcctccaaacttggcctgatgcttcaaaaatgatatctgcact 710 Query: 871 tgagtgcttggccatcatcacatttgttggtgcaactgatctggctgaaacagagttatc 930 ||| ||||| || | ||||||||||||||||||||||||| ||||||| || |||| Sbjct: 711 tgattgcttagctgttgtcacatttgttggtgcaactgatctatctgaaacccagctatc 770 Query: 931 tttgaaagccatgtgggatgtgattcatccaaaatcaggttcaaatgttggtactgtccg 990 | |||||||||| |||||||||||||| || || ||||| || |||||||| | |||| | Sbjct: 771 tatgaaagccatctgggatgtgattcaccctaagtcaggatccaatgttggaattgtcag 830 Query: 991 gaaaccaaagccacctgtgttagcagctgctctatctgcatgg 1033 ||||||||||| || |||||||||||||| | ||||||||| Sbjct: 831 aaaaccaaagcctcccttgttagcagctgctgtgtctgcatgg 873 Score = 81.8 bits (41), Expect = 9e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 518 gccaccgagaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctac 577 ||||||||| | || | |||||| || |||||||| ||||| |||||||||| |||||| Sbjct: 358 gccaccgagcaagttagctcgcaggattttgttcttgacaaatacatcgacgatctctat 417 Query: 578 gagaagagggggtctacaagagaggcagc 606 ||||||||||| || |||||||||||||| Sbjct: 418 gagaagaggggatccacaagagaggcagc 446
>ref|NM_001057007.1| Oryza sativa (japonica cultivar-group) Os03g0448700 (Os03g0448700) mRNA, complete cds Length = 1742 Score = 178 bits (90), Expect = 5e-41 Identities = 447/566 (78%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 932 tttctttctgctcttctagaagcggaggaccgtgctgtgcggatggctgctggtgaagca 991 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 ||||| ||||||| ||| |||| || |||||||| | | | |||||| | ||| | Sbjct: 992 ttagcactgtgcttcgagttaaaactgcttgatgttttctccaatgaagaagttgaggtg 1051 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 ||||||| || | || || |||||||| | |||||||| || |||||||||||||||| Sbjct: 1052 gacactgcagaagctagtggttctaagaaccaacttttcttgaatatgcaagcattgaag 1111 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| ||||||| | || ||||||||| ||| || ||||| | |||||| ||| Sbjct: 1112 gccaaaatatctggtctagtctataatctctctatggaagcggggggaagaggtgctgac 1171 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgtcaagtat 1399 ||||||||||| ||| |||||||| | || ||||| || | |||||| | ||| | Sbjct: 1172 aagaaaaatctgaatgatcaaagagacttattccaacgaatctcagattttattaagact 1231 Query: 1400 ggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaagggttgca 1459 |||||||||| |||||||||||| | ||||| || || | || | || |||| ||| || Sbjct: 1232 ggtgagtgccttgaagaatcacttagaattgcaggcaagcatggtattttaagagttaca 1291 Query: 1460 tcatggtctgaattgattcagttgaacttcttcaagcgtttcctcgggagaggcttcctg 1519 |||||| ||||| || |||||||||| || | ||| ||||| ||| |||| || ||| Sbjct: 1292 tcatggcgtgaatcaatacagttgaactatttgaggcggttccttgggcgaggatttctg 1351 Query: 1520 aagcatgtgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggct 1579 ||||||| || ||||||||| | || || |||||||| ||||||| || || || Sbjct: 1352 aagcatgcacaagacaatggattgctacatgatatctttgacatcaaaatggataaaact 1411 Query: 1580 gaaacgctgtcatcgaatgacaagaaaatctttagatctggagaagagaaaggaagagct 1639 |||| ||||| | | ||| |||||||||| ||| |||||||||||||||||||||||| Sbjct: 1412 gaaaacatgtcaaccactgaaaagaaaatctataggtctggagaagagaaaggaagagct 1471 Query: 1640 ctgaagctgaacaaggatcgtcgttt 1665 || ||| |||| ||||| |||||||| Sbjct: 1472 ctaaagttgaataaggagcgtcgttt 1497 Score = 149 bits (75), Expect = 4e-32 Identities = 233/283 (82%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 752 ttactgtctattacacttggtgctgggagtagctcacatgaaacaatggtagactcacat 811 |||||| | ||||||||||||||||| ||||| || ||||||| ||||| || || | | Sbjct: 584 ttactggccattacacttggtgctggaagtagttctcatgaaataatggatgaatcccgt 643 Query: 812 ccacagctttctaag-gtccttcaaacctggtcggatgcttcaaagatgatctctgctct 870 | |||||| || || ||||| ||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 644 ctgcagctt-ctgagagtcctccaaacttggcctgatgcttcaaaaatgatatctgcact 702 Query: 871 tgagtgcttggccatcatcacatttgttggtgcaactgatctggctgaaacagagttatc 930 ||| ||||| || | ||||||||||||||||||||||||| ||||||| || |||| Sbjct: 703 tgattgcttagctgttgtcacatttgttggtgcaactgatctatctgaaacccagctatc 762 Query: 931 tttgaaagccatgtgggatgtgattcatccaaaatcaggttcaaatgttggtactgtccg 990 | |||||||||| |||||||||||||| || || ||||| || |||||||| | |||| | Sbjct: 763 tatgaaagccatctgggatgtgattcaccctaagtcaggatccaatgttggaattgtcag 822 Query: 991 gaaaccaaagccacctgtgttagcagctgctctatctgcatgg 1033 ||||||||||| || |||||||||||||| | ||||||||| Sbjct: 823 aaaaccaaagcctcccttgttagcagctgctgtgtctgcatgg 865 Score = 81.8 bits (41), Expect = 9e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 518 gccaccgagaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctac 577 ||||||||| | || | |||||| || |||||||| ||||| |||||||||| |||||| Sbjct: 350 gccaccgagcaagttagctcgcaggattttgttcttgacaaatacatcgacgatctctat 409 Query: 578 gagaagagggggtctacaagagaggcagc 606 ||||||||||| || |||||||||||||| Sbjct: 410 gagaagaggggatccacaagagaggcagc 438
>dbj|AK102551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097C13, full insert sequence Length = 1741 Score = 157 bits (79), Expect = 2e-34 Identities = 445/566 (78%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 933 tttctttctgctcttctagaagcggaggaccgtgctgtgcggatggctgctggtgaagca 992 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 ||||| ||||| ||| |||| || |||||||| | | | |||||| | ||| | Sbjct: 993 ttagc--actgcttcgagttaaaactgcttgatgttttctccaatgaagaagttgaggtg 1050 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 ||||||| || | || || |||||||| | |||||||| || |||||||||||||||| Sbjct: 1051 gacactgcagaagctagtggttctaagaaccaacttttcttgaatatgcaagcattgaag 1110 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| ||||||| | || ||||||||| ||| || ||||| | |||||| ||| Sbjct: 1111 gccaaaatatctggtctagtctataatctctctatggaagcggggggaagaggtgctgac 1170 Query: 1340 aagaaaaatctttctgaccaaagagatctgtttcaacggattttggattttgtcaagtat 1399 ||||||||||| ||| |||||||| | || ||||| || | |||||| | ||| | Sbjct: 1171 aagaaaaatctgaatgatcaaagagacttattccaacgaatctcagattttattaagact 1230 Query: 1400 ggtgagtgccctgaagaatcactgaagattgctggaaaacgtgatgttctaagggttgca 1459 |||||||||| |||||||||||| | ||||| || || | || | || |||| ||| || Sbjct: 1231 ggtgagtgccttgaagaatcacttagaattgcaggcaagcatggtattttaagagttaca 1290 Query: 1460 tcatggtctgaattgattcagttgaacttcttcaagcgtttcctcgggagaggcttcctg 1519 |||||| ||||| || |||||||||| || | ||| ||||| ||| |||| || ||| Sbjct: 1291 tcatggcgtgaatcaatacagttgaactatttgaggcggttccttgggcgaggatttctg 1350 Query: 1520 aagcatgtgcaggacaatggacttcttcaagatatcttcaacatcaaggctgacaaggct 1579 ||||||| || ||||||||| | || || |||||||| ||||||| || || || Sbjct: 1351 aagcatgcacaagacaatggattgctacatgatatctttgacatcaaaatggataaaact 1410 Query: 1580 gaaacgctgtcatcgaatgacaagaaaatctttagatctggagaagagaaaggaagagct 1639 |||| ||||| | | ||| |||||||||| ||| |||||||||||||||||||||||| Sbjct: 1411 gaaaacatgtcaaccactgaaaagaaaatctataggtctggagaagagaaaggaagagct 1470 Query: 1640 ctgaagctgaacaaggatcgtcgttt 1665 || ||| |||| ||||| |||||||| Sbjct: 1471 ctaaagttgaataaggagcgtcgttt 1496 Score = 149 bits (75), Expect = 4e-32 Identities = 233/283 (82%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 752 ttactgtctattacacttggtgctgggagtagctcacatgaaacaatggtagactcacat 811 |||||| | ||||||||||||||||| ||||| || ||||||| ||||| || || | | Sbjct: 585 ttactggccattacacttggtgctggaagtagttctcatgaaataatggatgaatcccgt 644 Query: 812 ccacagctttctaag-gtccttcaaacctggtcggatgcttcaaagatgatctctgctct 870 | |||||| || || ||||| ||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 645 ctgcagctt-ctgagagtcctccaaacttggcctgatgcttcaaaaatgatatctgcact 703 Query: 871 tgagtgcttggccatcatcacatttgttggtgcaactgatctggctgaaacagagttatc 930 ||| ||||| || | ||||||||||||||||||||||||| ||||||| || |||| Sbjct: 704 tgattgcttagctgttgtcacatttgttggtgcaactgatctatctgaaacccagctatc 763 Query: 931 tttgaaagccatgtgggatgtgattcatccaaaatcaggttcaaatgttggtactgtccg 990 | |||||||||| |||||||||||||| || || ||||| || |||||||| | |||| | Sbjct: 764 tatgaaagccatctgggatgtgattcaccctaagtcaggatccaatgttggaattgtcag 823 Query: 991 gaaaccaaagccacctgtgttagcagctgctctatctgcatgg 1033 ||||||||||| || |||||||||||||| | ||||||||| Sbjct: 824 aaaaccaaagcctcccttgttagcagctgctgtgtctgcatgg 866 Score = 81.8 bits (41), Expect = 9e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 518 gccaccgagaacgtcaactcgcacgagtttgttctcgacaagtacatcgacgctctctac 577 ||||||||| | || | |||||| || |||||||| ||||| |||||||||| |||||| Sbjct: 351 gccaccgagcaagttagctcgcaggattttgttcttgacaaatacatcgacgatctctat 410 Query: 578 gagaagagggggtctacaagagaggcagc 606 ||||||||||| || |||||||||||||| Sbjct: 411 gagaagaggggatccacaagagaggcagc 439
>gb|BT018190.1| Zea mays clone EL01N0558H06.c mRNA sequence Length = 962 Score = 139 bits (70), Expect = 4e-29 Identities = 164/194 (84%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 785 tcacatgaaacaatggtagactcacatccacagctttctaaggtccttcaaacctggtcg 844 |||||||||||||||| | |||||||| || |||| || ||| |||||| ||||||| Sbjct: 535 tcacatgaaacaatggagcagtcacatccccaactttgtagggtacttcaagcctggtcc 594 Query: 845 gatgcttcaaagatgatctctgctcttgagtgcttggccatcatcacatttgttggtgca 904 |||||||| |||||||| | || ||||| || | ||| ||| || ||||||||| ||| Sbjct: 595 gatgcttcgaagatgatattggcacttgattgttcggctgtcaccatatttgttggagca 654 Query: 905 actgatctggctgaaacagagttatctttgaaagccatgtgggatgtgattcatccaaaa 964 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 655 actgatctggtcaaaacagagttat-tttgaaagccatgtgggatgtgattcatccaaag 713 Query: 965 tcaggttcaaatgt 978 || ||||||||||| Sbjct: 714 tctggttcaaatgt 727 Score = 52.0 bits (26), Expect = 0.008 Identities = 68/82 (82%) Strand = Plus / Plus Query: 668 tatgccactctactgagtctattcaatacttcgatcaagaagggatctatcaaggaggct 727 |||||| |||||||||||| |||||||| ||| || || | |||||||| ||||||| | Sbjct: 452 tatgccgctctactgagtcaattcaataattccatgaaaaggggatctactaaggaggtt 511 Query: 728 tgcctggcatctcgtgccattg 749 | |||||||| | |||||||| Sbjct: 512 tttctggcatcccatgccattg 533
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 125 bits (63), Expect = 6e-25 Identities = 204/251 (81%) Strand = Plus / Plus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 144929 tttctttctgctcttctagaagcggaggaccgtgctgtgcggatggctgctggtgaagca 144988 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 ||||| ||||||| ||| |||| || |||||||| | | | |||||| | ||| | Sbjct: 144989 ttagcactgtgcttcgagttaaaactgcttgatgttttctccaatgaagaagttgaggtg 145048 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 ||||||| || | || || |||||||| | |||||||| || |||||||||||||||| Sbjct: 145049 gacactgcagaagctagtggttctaagaaccaacttttcttgaatatgcaagcattgaag 145108 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| ||||||| | || ||||||||| ||| || ||||| | |||||| ||| Sbjct: 145109 gccaaaatatctggtctagtctataatctctctatggaagcggggggaagaggtgctgac 145168 Query: 1340 aagaaaaatct 1350 ||||||||||| Sbjct: 145169 aagaaaaatct 145179 Score = 85.7 bits (43), Expect = 5e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 888 tcacatttgttggtgcaactgatctggctgaaacagagttatctttgaaagccatgtggg 947 ||||||||||||||||||||||||| ||||||| || ||||| |||||||||| |||| Sbjct: 144537 tcacatttgttggtgcaactgatctatctgaaacccagctatctatgaaagccatctggg 144596 Query: 948 atgtgattcatccaaaatcaggttcaaatgt 978 |||||||||| || || ||||| || ||||| Sbjct: 144597 atgtgattcaccctaagtcaggatccaatgt 144627 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1602 agaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgtc 1661 ||||||||| ||| |||||||||||||||||||||||||| ||| |||| ||||| |||| Sbjct: 147389 agaaaatctataggtctggagaagagaaaggaagagctctaaagttgaataaggagcgtc 147448 Query: 1662 gttt 1665 |||| Sbjct: 147449 gttt 147452 Score = 50.1 bits (25), Expect = 0.030 Identities = 43/49 (87%) Strand = Plus / Plus Query: 752 ttactgtctattacacttggtgctgggagtagctcacatgaaacaatgg 800 |||||| | ||||||||||||||||| ||||| || ||||||| ||||| Sbjct: 144322 ttactggccattacacttggtgctggaagtagttctcatgaaataatgg 144370 Score = 44.1 bits (22), Expect = 1.9 Identities = 37/42 (88%) Strand = Plus / Plus Query: 992 aaaccaaagccacctgtgttagcagctgctctatctgcatgg 1033 ||||||||||| || |||||||||||||| | ||||||||| Sbjct: 144738 aaaccaaagcctcccttgttagcagctgctgtgtctgcatgg 144779
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 125 bits (63), Expect = 6e-25 Identities = 204/251 (81%) Strand = Plus / Minus Query: 1100 tttctctctactcttctaggagcagaggatcgtgctgttcggatggctgctggtgaagca 1159 ||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 19006689 tttctttctgctcttctagaagcggaggaccgtgctgtgcggatggctgctggtgaagca 19006630 Query: 1160 ttagctttgtgctttgagctaaatctacttgatgtctccccttctgaagacgatgatgat 1219 ||||| ||||||| ||| |||| || |||||||| | | | |||||| | ||| | Sbjct: 19006629 ttagcactgtgcttcgagttaaaactgcttgatgttttctccaatgaagaagttgaggtg 19006570 Query: 1220 gacactggagtacctggtagttctaagggcaaacttttcctggatatgcaagcattgaaa 1279 ||||||| || | || || |||||||| | |||||||| || |||||||||||||||| Sbjct: 19006569 gacactgcagaagctagtggttctaagaaccaacttttcttgaatatgcaagcattgaag 19006510 Query: 1280 gccaagatagctggtcttgcctcaaatctctctgcggaggcaggggggaaaggtgcagac 1339 ||||| ||| ||||||| | || ||||||||| ||| || ||||| | |||||| ||| Sbjct: 19006509 gccaaaatatctggtctagtctataatctctctatggaagcggggggaagaggtgctgac 19006450 Query: 1340 aagaaaaatct 1350 ||||||||||| Sbjct: 19006449 aagaaaaatct 19006439 Score = 85.7 bits (43), Expect = 5e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 888 tcacatttgttggtgcaactgatctggctgaaacagagttatctttgaaagccatgtggg 947 ||||||||||||||||||||||||| ||||||| || ||||| |||||||||| |||| Sbjct: 19007081 tcacatttgttggtgcaactgatctatctgaaacccagctatctatgaaagccatctggg 19007022 Query: 948 atgtgattcatccaaaatcaggttcaaatgt 978 |||||||||| || || ||||| || ||||| Sbjct: 19007021 atgtgattcaccctaagtcaggatccaatgt 19006991 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 1602 agaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgtc 1661 ||||||||| ||| |||||||||||||||||||||||||| ||| |||| ||||| |||| Sbjct: 19004229 agaaaatctataggtctggagaagagaaaggaagagctctaaagttgaataaggagcgtc 19004170 Query: 1662 gttt 1665 |||| Sbjct: 19004169 gttt 19004166 Score = 50.1 bits (25), Expect = 0.030 Identities = 43/49 (87%) Strand = Plus / Minus Query: 752 ttactgtctattacacttggtgctgggagtagctcacatgaaacaatgg 800 |||||| | ||||||||||||||||| ||||| || ||||||| ||||| Sbjct: 19007296 ttactggccattacacttggtgctggaagtagttctcatgaaataatgg 19007248 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttctc 199 |||||||||||||||||||||| Sbjct: 1197705 cctgcttctgcttctgcttctc 1197726 Score = 44.1 bits (22), Expect = 1.9 Identities = 37/42 (88%) Strand = Plus / Minus Query: 992 aaaccaaagccacctgtgttagcagctgctctatctgcatgg 1033 ||||||||||| || |||||||||||||| | ||||||||| Sbjct: 19006880 aaaccaaagcctcccttgttagcagctgctgtgtctgcatgg 19006839 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 13849137 cctgcttctgcttctgcttct 13849117
>gb|AY110690.1| Zea mays CL29906_1 mRNA sequence Length = 710 Score = 89.7 bits (45), Expect = 4e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 1601 aagaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgt 1660 |||||||| || ||||||||||||||||||||||||||||||||| |||| || || ||| Sbjct: 334 aagaaaatgttcagatctggagaagagaaaggaagagctctgaagttgaataaagagcgt 275 Query: 1661 cgtttggcacaggagaggaag 1681 ||| | || |||||||||||| Sbjct: 274 cgtctagctcaggagaggaag 254 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1399 tggtgagtgccctgaagaatcact 1422 |||||||||||||||||||||||| Sbjct: 536 tggtgagtgccctgaagaatcact 513
>emb|CT828420.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN047C13, full insert sequence Length = 338 Score = 81.8 bits (41), Expect = 9e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1601 aagaaaatctttagatctggagaagagaaaggaagagctctgaagctgaacaaggatcgt 1660 |||||||||| ||| |||||||||||||||||||||||||| ||| |||| ||||| ||| Sbjct: 29 aagaaaatctataggtctggagaagagaaaggaagagctctaaagttgaataaggagcgt 88 Query: 1661 cgttt 1665 ||||| Sbjct: 89 cgttt 93
>gb|AC123597.9| Mus musculus chromosome 8, clone RP23-134A7, complete sequence Length = 172297 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 1761 tggaatttatttatttatatctgtgta 1787 ||||||||||||||||||||||||||| Sbjct: 43019 tggaatttatttatttatatctgtgta 42993
>gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, complete sequence Length = 127112 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttctcc 200 ||||||||||||||||||||||||| Sbjct: 26386 cccctgcttctgcttctgcttctcc 26410
>gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, complete sequence Length = 198706 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 176 cccctgcttctgcttctgcttctcc 200 ||||||||||||||||||||||||| Sbjct: 24235 cccctgcttctgcttctgcttctcc 24211
>gb|AC102854.12| Mus musculus chromosome 3, clone RP24-493E20, complete sequence Length = 133271 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttctcc 200 ||||||||||||||||||||||||| Sbjct: 91709 cccctgcttctgcttctgcttctcc 91733
>gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207366 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1710 aaaggaaacaaaacaaaacctcat 1733 |||||||||||||||||||||||| Sbjct: 161376 aaaggaaacaaaacaaaacctcat 161353
>gb|AF519811.1| Lagenaria siceraria cyclin D3.2 protein mRNA, complete cds Length = 1565 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 ccctgcttctgcttctgcttctcc 200 |||||||||||||||||||||||| Sbjct: 1138 ccctgcttctgcttctgcttctcc 1115
>gb|AC006968.2|AC006968 Homo sapiens PAC clone RP4-649M7 from Xq23, complete sequence Length = 96280 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1171 ctttgagctaaatctacttgatgt 1194 |||||||||||||||||||||||| Sbjct: 94128 ctttgagctaaatctacttgatgt 94105
>gb|AC108909.15| Mus musculus chromosome 3, clone RP24-245I16, complete sequence Length = 194252 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttct 198 ||||||||||||||||||||||| Sbjct: 179597 cccctgcttctgcttctgcttct 179619
>gb|AC133601.3| Mus musculus BAC clone RP24-179O1 from chromosome 18, complete sequence Length = 180978 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttctcc 200 ||||||||||||||||||||||| Sbjct: 120646 cctgcttctgcttctgcttctcc 120668
>gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosome 3, complete sequence Length = 173268 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 cccctgcttctgcttctgcttct 198 ||||||||||||||||||||||| Sbjct: 146185 cccctgcttctgcttctgcttct 146163
>gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, complete sequence Length = 175889 Score = 46.1 bits (23), Expect = 0.47 Identities = 26/27 (96%) Strand = Plus / Plus Query: 81 gccagcccctccccatccccgaccccg 107 |||||||||||||||||||| |||||| Sbjct: 113926 gccagcccctccccatccccaaccccg 113952
>ref|XM_756136.1| Ustilago maydis 521 hypothetical protein (UM05082.1) partial mRNA Length = 1848 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttct 198 ||||||||||||||||||||||| Sbjct: 1736 cccctgcttctgcttctgcttct 1758
>emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chromosome 10 Contains the gene for a novel protein similar to lysozyme C-1 (1 4-beta-N-acylmuramidase C EC 3.2.1.17) (MGC33408), three novel genes and a supervillin pseudogene (SVIL), complete sequence Length = 172779 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1756 tgagctggaatttatttatttat 1778 ||||||||||||||||||||||| Sbjct: 54086 tgagctggaatttatttatttat 54064
>emb|AL353590.14| Human DNA sequence from clone RP11-420P23 on chromosome 9, complete sequence Length = 159927 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1711 aaggaaacaaaacaaaacctcat 1733 ||||||||||||||||||||||| Sbjct: 41103 aaggaaacaaaacaaaacctcat 41125
>gb|AC154454.2| Mus musculus BAC clone RP24-173H15 from chromosome 13, complete sequence Length = 181147 Score = 46.1 bits (23), Expect = 0.47 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 gccagcccctccccatccccgaccccg 107 |||||||||||||||||||| |||||| Sbjct: 139887 gccagcccctccccatccccaaccccg 139861
>emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chromosome 2, complete sequence Length = 198403 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 agcccctccccatccccgacccc 106 ||||||||||||||||||||||| Sbjct: 128207 agcccctccccatccccgacccc 128229
>gb|AC189634.1| Brassica rapa subsp. pekinensis clone KBrS004I08, complete sequence Length = 99973 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ccctgcttctgcttctgcttct 198 |||||||||||||||||||||| Sbjct: 5484 ccctgcttctgcttctgcttct 5505
>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete sequence Length = 208029 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 63249 ctgcttctgcttctgcttctcc 63270
>gb|AC109195.27| Mus musculus chromosome 15, clone RP24-212B11, complete sequence Length = 168270 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 97785 ctgcttctgcttctgcttctcc 97764
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1200 cttctgaagacgatgatgatga 1221 |||||||||||||||||||||| Sbjct: 47073 cttctgaagacgatgatgatga 47094
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 15109 ctgcttctgcttctgcttctcc 15088
>ref|XM_505002.1| Yarrowia lipolytica CLIB122, YALI0F04686g predicted mRNA Length = 3408 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 565 ctgcttctgcttctgcttctcc 544
>gb|AC131720.2| Mus musculus BAC clone RP23-137I3 from chromosome 10, complete sequence Length = 207949 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1765 atttatttatttatatctgtgt 1786 |||||||||||||||||||||| Sbjct: 141776 atttatttatttatatctgtgt 141797
>gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, complete sequence Length = 160354 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 70982 ctgcttctgcttctgcttctcc 70961
>gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173015 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 51618 ctgcttctgcttctgcttctcc 51597
>gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosome 16, complete sequence Length = 182676 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1765 atttatttatttatatctgtgt 1786 |||||||||||||||||||||| Sbjct: 137012 atttatttatttatatctgtgt 137033
>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence Length = 252718 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 189270 ctgcttctgcttctgcttctcc 189249
>gb|AC110818.5| Mus musculus BAC clone RP23-198H8 from 16, complete sequence Length = 182807 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 181357 ctgcttctgcttctgcttctcc 181378
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ccctgcttctgcttctgcttct 198 |||||||||||||||||||||| Sbjct: 25394 ccctgcttctgcttctgcttct 25373
>gb|AC083867.7| Homo sapiens chromosome 7 clone RP11-183I20, complete sequence Length = 148251 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 85556 ctgcttctgcttctgcttctcc 85535
>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence Length = 242759 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 101006 ctgcttctgcttctgcttctcc 100985
>gb|AC130886.3| Homo sapiens X BAC RP11-361B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 79337 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1759 gctggaatttatttatttatat 1780 |||||||||||||||||||||| Sbjct: 34327 gctggaatttatttatttatat 34306
>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence Length = 223640 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 37190 ctgcttctgcttctgcttctcc 37211
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 76854 ctgcttctgcttctgcttctcc 76833 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 86701 cctgcttctgcttctgcttct 86721
>ref|NM_175138.2| Mus musculus dynein, axonemal, intermediate chain 1 (Dnaic1), mRNA dbj|AK047808.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030047J03 product:DYNEIN INTERMEDIATE CHAIN 1, AXONEMAL (AXONEMAL DYNEIN INTERMEDIATE CHAIN 1) homolog [Homo sapiens], full insert sequence Length = 2484 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 665 ctgcttctgcttctgcttctcc 644
>dbj|AK030213.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933424D14 product:DYNEIN INTERMEDIATE CHAIN 1, AXONEMAL (AXONEMAL DYNEIN INTERMEDIATE CHAIN 1) homolog [Homo sapiens], full insert sequence Length = 2417 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 598 ctgcttctgcttctgcttctcc 577
>gb|AC090448.5| Homo sapiens chromosome 8, clone RP11-142M8, complete sequence Length = 82020 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaacctcat 1733 |||||| ||||||||||||||||||| Sbjct: 18162 agaaagaaaacaaaacaaaacctcat 18137
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 2339509 ctgcttctgcttctgcttctcc 2339488
>gb|AC012213.8| Homo sapiens chromosome , clone RP11-1C8, complete sequence Length = 176922 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1708 agaaaggaaacaaaacaaaacctcat 1733 |||||| ||||||||||||||||||| Sbjct: 31780 agaaagaaaacaaaacaaaacctcat 31805
>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete sequence Length = 159845 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 22144 ctgcttctgcttctgcttctcc 22123
>gb|AC154839.3| Mus musculus BAC clone RP23-61L24 from chromosome 13, complete sequence Length = 209819 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 99381 ctgcttctgcttctgcttctcc 99402 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 99461 cctgcttctgcttctgcttct 99481
>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence Length = 192299 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 7698 ctgcttctgcttctgcttctcc 7719 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 7778 cctgcttctgcttctgcttct 7798
>emb|BX294020.1|NC7F4 Neurospora crassa DNA linkage group V Cosmid contig 7F4 Length = 115416 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ccctgcttctgcttctgcttct 198 |||||||||||||||||||||| Sbjct: 4545 ccctgcttctgcttctgcttct 4524
>emb|AL604022.21| Mouse DNA sequence from clone RP23-449P23 on chromosome 11 Contains the 3' end of a novel gene (4732452J19Rik), the Supt4h gene for suppressor of Ty 4 homolog (S. cerevisiae), a novel gene (A430104N18Rik), the Bzrap1 gene for benzodiazapine receptor associated protein 1, the Mpo gene for myeloperoxidase, a novel gene, the 3' end of the Lpo gene for lactoperoxidase and a CpG island, complete sequence Length = 92337 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ccctgcttctgcttctgcttct 198 |||||||||||||||||||||| Sbjct: 59539 ccctgcttctgcttctgcttct 59560
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 ctccctcctccccgtccgcctc 32 |||||||||||||||||||||| Sbjct: 110100 ctccctcctccccgtccgcctc 110121
>gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome 13, complete sequence Length = 157775 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1374 aacggattttggattttgtcaa 1395 |||||||||||||||||||||| Sbjct: 53628 aacggattttggattttgtcaa 53649
>emb|CR752647.6| Mouse DNA sequence from clone RP24-115K8 on chromosome X, complete sequence Length = 37067 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 36518 ctgcttctgcttctgcttctcc 36497 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 36572 ctgcttctgcttctgcttctcc 36551
>ref|XM_958850.1| Neurospora crassa OR74A hypothetical protein (NCU02787.1) partial mRNA Length = 3525 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 3341 ctgcttctgcttctgcttctcc 3362
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttctc 199 |||||||||||||||||||||| Sbjct: 2609 cctgcttctgcttctgcttctc 2630
>emb|AL713898.9| Mouse DNA sequence from clone RP23-253D13 on chromosome X, complete sequence Length = 189001 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 1451 ctgcttctgcttctgcttctcc 1430 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 1505 ctgcttctgcttctgcttctcc 1484
>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 187696 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 63131 ctgcttctgcttctgcttctcc 63110
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ccctgcttctgcttctgcttct 198 |||||||||||||||||||||| Sbjct: 50830 ccctgcttctgcttctgcttct 50851
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 725111 ctgcttctgcttctgcttctcc 725090
>emb|AL928732.7| Mouse DNA sequence from clone RP23-403C18 on chromosome 2, complete sequence Length = 149273 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1707 gagaaaggaaacaaaacaaaac 1728 |||||||||||||||||||||| Sbjct: 63375 gagaaaggaaacaaaacaaaac 63354
>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete sequence Length = 171424 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 128973 ctgcttctgcttctgcttctcc 128952
>emb|AL807242.7| Mouse DNA sequence from clone RP23-152G19 on chromosome 4, complete sequence Length = 213746 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 57618 ctgcttctgcttctgcttctcc 57639
>gb|AC168058.4| Mus musculus BAC clone RP24-134D11 from chromosome 10, complete sequence Length = 199406 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1765 atttatttatttatatctgtgt 1786 |||||||||||||||||||||| Sbjct: 184269 atttatttatttatatctgtgt 184248
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctcc 200 |||||||||||||||||||||| Sbjct: 67424 ctgcttctgcttctgcttctcc 67403
>dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1735D4 Length = 212373 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaacctcat 1733 |||||| ||||||||||||||||||| Sbjct: 80568 agaaagaaaacaaaacaaaacctcat 80543
>gb|AC191450.7| Rhesus Macaque BAC CH250-287H18 () complete sequence Length = 180230 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1620 gagaagagaaaggaagagctctgaa 1644 |||||||||||||||||||| |||| Sbjct: 29243 gagaagagaaaggaagagctatgaa 29267
>ref|NM_011097.2| Mus musculus paired-like homeodomain transcription factor 1 (Pitx1), mRNA Length = 2448 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gattccgcccgcgcccgctcc 254 ||||||||||||||||||||| Sbjct: 37 gattccgcccgcgcccgctcc 57
>emb|CT835499.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN078F17, full insert sequence Length = 1251 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 76 cctgcttctgcttctgcttct 96
>emb|CT835454.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008E12, full insert sequence Length = 1070 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 78 cctgcttctgcttctgcttct 98
>emb|CT027729.13| Zebrafish DNA sequence from clone DKEY-53G21 in linkage group 15, complete sequence Length = 170328 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1765 atttatttatttatatctgtg 1785 ||||||||||||||||||||| Sbjct: 15475 atttatttatttatatctgtg 15495
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 gcgccgcgcatctcgattccgcccgcgcc 248 |||||||||||| ||||||||| |||||| Sbjct: 860071 gcgccgcgcatcccgattccgcgcgcgcc 860099
>gb|AC190231.2| Pan troglodytes BAC clone CH251-739F15 from chromosome 7, complete sequence Length = 174943 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 62358 cctgcttctgcttctgcttct 62338
>dbj|AK240583.1| Sus scrofa mRNA, clone:UTR010102A09, expressed in uterus Length = 2001 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1710 aaaggaaacaaaacaaaacct 1730 ||||||||||||||||||||| Sbjct: 309 aaaggaaacaaaacaaaacct 289
>ref|NM_001053879.1| Oryza sativa (japonica cultivar-group) Os02g0600200 (Os02g0600200) mRNA, complete cds Length = 1251 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccctgcttctgcttctgcttctcc 200 |||||||||||| |||||||||||| Sbjct: 853 cccctgcttctggttctgcttctcc 829
>ref|XR_023110.1| PREDICTED: Pan troglodytes kinase suppressor of ras (KSR1), mRNA Length = 6127 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ctccccgtccgcctccgtccc 38 ||||||||||||||||||||| Sbjct: 126 ctccccgtccgcctccgtccc 106
>ref|XM_001144492.1| PREDICTED: Pan troglodytes similar to OFD1 protein, transcript variant 1 (LOC461914), mRNA Length = 3255 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 ctgaagaatcactgaagattg 1430 ||||||||||||||||||||| Sbjct: 2870 ctgaagaatcactgaagattg 2890
>ref|XM_001144571.1| PREDICTED: Pan troglodytes similar to OFD1 protein, transcript variant 2 (LOC461914), mRNA Length = 3366 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 ctgaagaatcactgaagattg 1430 ||||||||||||||||||||| Sbjct: 2981 ctgaagaatcactgaagattg 3001
>ref|XM_517799.2| PREDICTED: Pan troglodytes similar to OFD1 protein, transcript variant 3 (LOC461914), mRNA Length = 3486 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 ctgaagaatcactgaagattg 1430 ||||||||||||||||||||| Sbjct: 3101 ctgaagaatcactgaagattg 3121
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 15996025 cctgcttctgcttctgcttct 15996005
>emb|CU013542.5| M.truncatula DNA sequence from clone MTH2-64I10 on chromosome 3, complete sequence Length = 107087 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 6775 cctgcttctgcttctgcttct 6795
>ref|XM_001122534.1| PREDICTED: Apis mellifera hypothetical protein LOC726813 (LOC726813), partial mRNA Length = 693 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tgcttctgcttctgcttctcc 200 ||||||||||||||||||||| Sbjct: 72 tgcttctgcttctgcttctcc 52
>gb|AC182677.2| Populus trichocarpa clone Pop1-29G16, complete sequence Length = 141948 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1534 caatggacttcttcaagatat 1554 ||||||||||||||||||||| Sbjct: 63494 caatggacttcttcaagatat 63514
>gb|AC096474.12| Rattus norvegicus Pia BAC CH230-53O4 () complete sequence Length = 242701 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1394 aagtatggtgagtgccctgaa 1414 ||||||||||||||||||||| Sbjct: 69720 aagtatggtgagtgccctgaa 69740
>ref|XM_001065794.1| PREDICTED: Rattus norvegicus AT rich interactive domain 1A (Swi1 like) (predicted) (Arid1a_predicted), mRNA Length = 7429 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 7196 agaaaggaaacaaaacaaaac 7176
>ref|XM_216340.4| PREDICTED: Rattus norvegicus AT rich interactive domain 1A (Swi1 like) (predicted) (Arid1a_predicted), mRNA Length = 8161 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 7928 agaaaggaaacaaaacaaaac 7908
>ref|NM_148504.1| Arabidopsis thaliana unknown protein (AT1G33135) mRNA, complete cds Length = 423 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 43 ctgcttctgcttctgcttctc 23
>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence Length = 185733 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cggagaccacggcccggccag 85 ||||||||||||||||||||| Sbjct: 74672 cggagaccacggcccggccag 74692
>gb|AC121552.14| Mus musculus chromosome 19, clone RP24-145I16, complete sequence Length = 179737 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 153818 cctgcttctgcttctgcttct 153798
>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence Length = 182519 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 180648 cctgcttctgcttctgcttct 180628
>gb|AC101908.8| Mus musculus chromosome 1, clone RP24-275J1, complete sequence Length = 164826 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 154269 agaaaggaaacaaaacaaaac 154249
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 84478 cctgcttctgcttctgcttct 84458
>gb|AC102916.5| Mus musculus chromosome 5, clone RP24-274I18, complete sequence Length = 144142 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1768 tatttatttatatctgtgtaa 1788 ||||||||||||||||||||| Sbjct: 63508 tatttatttatatctgtgtaa 63528
>gb|U50066.1| Caenorhabditis elegans cosmid T14A8, complete sequence Length = 9170 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1201 ttctgaagacgatgatgatga 1221 ||||||||||||||||||||| Sbjct: 2948 ttctgaagacgatgatgatga 2968
>gb|AC122791.13| Mus musculus chromosome 13, clone RP24-266G22, complete sequence Length = 165861 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gattccgcccgcgcccgctcc 254 ||||||||||||||||||||| Sbjct: 22061 gattccgcccgcgcccgctcc 22041
>ref|XM_867181.1| PREDICTED: Bos taurus similar to Olfactory guanylyl cyclase GC-D precursor (Guanylate cyclase, olfactory) (LOC615385), mRNA Length = 1026 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 ttggttgatgctttcgaaagt 637 ||||||||||||||||||||| Sbjct: 102 ttggttgatgctttcgaaagt 82
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 57891 cctgcttctgcttctgcttct 57871
>gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, complete sequence Length = 228427 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1708 agaaaggaaacaaaacaaaacctca 1732 ||||||| ||||||||||||||||| Sbjct: 99171 agaaaggcaacaaaacaaaacctca 99195
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1704 aacgagaaaggaaacaaaacaaaac 1728 |||| |||||||||||||||||||| Sbjct: 80218 aacgtgaaaggaaacaaaacaaaac 80242
>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence Length = 216399 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 212271 agaaaggaaacaaaacaaaac 212251
>gb|AE009236.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 6 of 187 of the complete sequence Length = 10640 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1016 gctgctctatctgcatggacgtttctgct 1044 ||||| |||||||||||||| |||||||| Sbjct: 5767 gctgcactatctgcatggacttttctgct 5739
>gb|AE008377.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 181 of 187 of the complete sequence Length = 11457 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1016 gctgctctatctgcatggacgtttctgct 1044 ||||| |||||||||||||| |||||||| Sbjct: 9160 gctgcactatctgcatggacttttctgct 9188
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence Length = 155547 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 47795 cctgcttctgcttctgcttct 47815
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 16491 cctgcttctgcttctgcttct 16511
>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence Length = 211576 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 172932 cctgcttctgcttctgcttct 172912
>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence Length = 176949 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 161830 cctgcttctgcttctgcttct 161850
>gb|AF057142.2| Agrobacterium sp. ATCC 31749 putative beta 1,3 glucan synthase catalytic subunit (crd) gene, complete cds Length = 2085 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1016 gctgctctatctgcatggacgtttctgct 1044 ||||| |||||||||||||| |||||||| Sbjct: 1227 gctgcactatctgcatggacttttctgct 1255
>gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome 18, complete sequence Length = 246348 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 168481 agaaaggaaacaaaacaaaac 168501
>gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosome 6, complete sequence Length = 169094 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 67022 cctgcttctgcttctgcttct 67002
>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence Length = 200663 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 660 agaacaaatatgccactctac 680 ||||||||||||||||||||| Sbjct: 74219 agaacaaatatgccactctac 74199
>ref|XM_538452.2| PREDICTED: Canis familiaris similar to mitogen-activated protein kinase kinase kinase kinase 4 isoform 2 (LOC481331), mRNA Length = 4139 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 4056 agaaaggaaacaaaacaaaac 4036
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaacctca 1732 |||||||||||||||||||| |||| Sbjct: 7225 agaaaggaaacaaaacaaaaactca 7201
>gb|AC131653.4| Mus musculus BAC clone RP23-220N8 from chromosome 19, complete sequence Length = 168365 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 108624 cctgcttctgcttctgcttct 108644
>gb|AC121967.3| Mus musculus BAC clone RP24-268P11 from chromosome 19, complete sequence Length = 185775 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 31344 cctgcttctgcttctgcttct 31324
>gb|AC121826.3| Mus musculus BAC clone RP23-470O13 from chromosome 3, complete sequence Length = 187184 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 91482 cctgcttctgcttctgcttct 91502
>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence Length = 160339 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 134413 cctgcttctgcttctgcttct 134433
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 157348 cctgcttctgcttctgcttct 157368
>gb|AC002429.1| Homo sapiens BAC clone GS1-200K5 from 7, complete sequence Length = 234053 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1710 aaaggaaacaaaacaaaacctcatc 1734 |||||||||||||||| |||||||| Sbjct: 145324 aaaggaaacaaaacaagacctcatc 145300
>gb|AC162909.2| Mus musculus BAC clone RP24-308O19 from chromosome 17, complete sequence Length = 145512 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 45178 ctgcttctgcttctgcttctc 45158
>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence Length = 222348 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 16103 ctgcttctgcttctgcttctc 16123
>gb|AC165968.3| Mus musculus BAC clone RP23-181K4 from chromosome 7, complete sequence Length = 190840 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 16945 cctgcttctgcttctgcttct 16965
>gb|AC160032.7| Mus musculus 6 BAC RP24-179I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200439 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 49008 cctgcttctgcttctgcttct 49028
>gb|AC120138.9| Mus musculus chromosome 1, clone RP23-283D3, complete sequence Length = 216381 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 127746 cctgcttctgcttctgcttct 127766
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 202287 cctgcttctgcttctgcttct 202307
>gb|BC051016.1| Mus musculus cDNA clone IMAGE:6309545, partial cds Length = 3504 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cggagaccacggcccggccag 85 ||||||||||||||||||||| Sbjct: 56 cggagaccacggcccggccag 76
>gb|AC158580.3| Mus musculus chromosome 1, clone RP24-97G17, complete sequence Length = 159618 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 86292 agaaaggaaacaaaacaaaac 86312
>gb|AC119801.14| Mus musculus, clone RP23-54N13, complete sequence Length = 251756 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 237665 cctgcttctgcttctgcttct 237685
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1545 ttcaagatatcttcaacatca 1565 ||||||||||||||||||||| Sbjct: 3212 ttcaagatatcttcaacatca 3192
>ref|XM_384920.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG04744.1) partial mRNA Length = 1662 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1557 tcaacatcaaggctgacaaggctga 1581 |||||||||||||||| |||||||| Sbjct: 932 tcaacatcaaggctgaaaaggctga 956
>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete sequence Length = 119664 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1394 aagtatggtgagtgccctgaa 1414 ||||||||||||||||||||| Sbjct: 57267 aagtatggtgagtgccctgaa 57247
>gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's Hospital Oakland Research Institute) complete sequence Length = 216194 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 109954 cctgcttctgcttctgcttct 109934
>gb|AC134175.1| Drosophila pseudoobscura FOSMID DPSF1-548A9 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 45260 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 6733 ctgcttctgcttctgcttctc 6713
>gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 225052 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1707 gagaaaggaaacaaaacaaaa 1727 ||||||||||||||||||||| Sbjct: 195941 gagaaaggaaacaaaacaaaa 195921
>gb|AF396666.1| Gallus gallus dorsal neural-tube nuclear protein (DNTNP) mRNA, complete cds Length = 1257 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1204 tgaagacgatgatgatgacac 1224 ||||||||||||||||||||| Sbjct: 972 tgaagacgatgatgatgacac 992
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcttctgcttctgcttctccg 201 ||||||||||||||||||||| Sbjct: 1581342 gcttctgcttctgcttctccg 1581322
>gb|AC069366.8| Homo sapiens chromosome 17, clone RP11-720N19, complete sequence Length = 180754 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ctccccgtccgcctccgtccc 38 ||||||||||||||||||||| Sbjct: 140423 ctccccgtccgcctccgtccc 140443
>ref|NM_068898.3| Caenorhabditis elegans Resistance to Inhibitors of Cholinesterase family member (ric-3) (ric-3) mRNA, complete cds Length = 1564 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1201 ttctgaagacgatgatgatga 1221 ||||||||||||||||||||| Sbjct: 501 ttctgaagacgatgatgatga 521
>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete sequence Length = 169798 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 100707 ctgcttctgcttctgcttctc 100687
>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8, complete sequence Length = 173122 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1765 atttatttatttatatctgtg 1785 ||||||||||||||||||||| Sbjct: 1700 atttatttatttatatctgtg 1680
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 23931446 cctgcttctgcttctgcttct 23931426
>gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, complete sequence Length = 143494 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1620 gagaagagaaaggaagagctctgaa 1644 |||||||||||||||||||| |||| Sbjct: 131243 gagaagagaaaggaagagctatgaa 131267
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttctcc 200 |||||||||||| |||||||||||| Sbjct: 23485903 cccctgcttctggttctgcttctcc 23485927 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 35696496 cctgcttctgcttctgcttct 35696476
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 130690 cctgcttctgcttctgcttct 130670
>emb|AL606477.11| Human DNA sequence from clone RP11-190H11 on chromosome 1 Contains the 5' end of the gene for HP1-BP74, the 3' end of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3 and three CpG islands, complete sequence Length = 139961 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1758 agctggaatttatttatttat 1778 ||||||||||||||||||||| Sbjct: 40810 agctggaatttatttatttat 40830
>emb|AL357713.11| Human DNA sequence from clone RP11-3J23 on chromosome 1 Contains part of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (FLJ38775), complete sequence Length = 103513 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 ggaagagtaagaagagcaagg 422 ||||||||||||||||||||| Sbjct: 53975 ggaagagtaagaagagcaagg 53955
>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a novel gene, part of a novel gene (LOC284757) and a CpG island, complete sequence Length = 118873 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1374 aacggattttggattttgtcaagta 1398 ||||||||||| ||||||||||||| Sbjct: 105831 aacggattttgaattttgtcaagta 105855
>emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K2 on chromosome 6q26-27 Contains three novel genes and two CpG islands, complete sequence Length = 130296 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 1990 ctgcttctgcttctgcttctc 2010
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence Length = 202301 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 55249 cctgcttctgcttctgcttct 55269
>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete sequence Length = 236374 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 50552 agaaaggaaacaaaacaaaac 50532
>gb|AC154264.2| Mus musculus BAC clone RP24-316B2 from chromosome 9, complete sequence Length = 166515 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 94052 cctgcttctgcttctgcttct 94072
>gb|AC025449.6| Homo sapiens chromosome 5 clone CTD-2124B8, complete sequence Length = 199036 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 ctgaagaatcactgaagattg 1430 ||||||||||||||||||||| Sbjct: 64988 ctgaagaatcactgaagattg 65008
>gb|AC079869.22|AC079869 Mus musculus 9 BAC RP23-49M18 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 243675 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1801 agaatgtccttagagcttgctcctt 1825 |||||||||||||||| |||||||| Sbjct: 75267 agaatgtccttagagcatgctcctt 75243
>emb|AJ851790.1| Gallus gallus mRNA for hypothetical protein, clone 33c19 Length = 2353 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1204 tgaagacgatgatgatgacac 1224 ||||||||||||||||||||| Sbjct: 1175 tgaagacgatgatgatgacac 1195
>gb|AC157773.6| Mus musculus chromosome 8, clone RP24-161L20, complete sequence Length = 179186 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 102713 ctgcttctgcttctgcttctc 102693
>gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, complete sequence Length = 167982 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 24187 cctgcttctgcttctgcttct 24167
>ref|NM_204388.2| Gallus gallus family with sequence similarity 53, member A (FAM53A), mRNA emb|AJ720049.1| Gallus gallus mRNA for hypothetical protein, clone 9o15 Length = 2359 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1204 tgaagacgatgatgatgacac 1224 ||||||||||||||||||||| Sbjct: 1185 tgaagacgatgatgatgacac 1205
>gb|AC011446.6|AC011446 Homo sapiens chromosome 19 clone CTC-250I14, complete sequence Length = 115932 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gcccctccccatccccgaccc 105 ||||||||||||||||||||| Sbjct: 22726 gcccctccccatccccgaccc 22706
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 100142 agaaaggaaacaaaacaaaac 100162
>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence Length = 175708 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1801 agaatgtccttagagcttgctcctt 1825 |||||||||||||||| |||||||| Sbjct: 151377 agaatgtccttagagcatgctcctt 151353
>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence Length = 163994 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1758 agctggaatttatttatttat 1778 ||||||||||||||||||||| Sbjct: 102023 agctggaatttatttatttat 102003
>emb|BX511148.7| Zebrafish DNA sequence from clone DKEY-174N20 in linkage group 5, complete sequence Length = 162495 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1306 tctctctgcggaggcaggggg 1326 ||||||||||||||||||||| Sbjct: 114532 tctctctgcggaggcaggggg 114552
>gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N14, complete sequence Length = 172237 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 43200 cctgcttctgcttctgcttct 43220
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 57110 cctgcttctgcttctgcttct 57090
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttctcc 200 |||||||||||| |||||||||||| Sbjct: 51586 cccctgcttctggttctgcttctcc 51610
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 49113 agaaaggaaacaaaacaaaac 49093
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 cccctgcttctgcttctgcttctcc 200 |||||||||||| |||||||||||| Sbjct: 104578 cccctgcttctggttctgcttctcc 104602
>gb|AC021045.2|AC021045 Arabidopsis thaliana chromosome I BAC T9L6 genomic sequence, complete sequence Length = 90632 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 51534 ctgcttctgcttctgcttctc 51514
>gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, complete sequence Length = 150467 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 64569 cctgcttctgcttctgcttct 64549
>dbj|AK066974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089P10, full insert sequence Length = 1252 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccctgcttctgcttctgcttctcc 200 |||||||||||| |||||||||||| Sbjct: 854 cccctgcttctggttctgcttctcc 830
>dbj|AK058978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D08, full insert sequence Length = 414 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccctgcttctgcttctgcttctcc 200 |||||||||||| |||||||||||| Sbjct: 276 cccctgcttctggttctgcttctcc 252
>emb|BX571881.6| Zebrafish DNA sequence from clone DKEY-251M4 in linkage group 18, complete sequence Length = 100776 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1765 atttatttatttatatctgtg 1785 ||||||||||||||||||||| Sbjct: 48017 atttatttatttatatctgtg 48037
>emb|BX296519.3| Zebrafish DNA sequence from clone CH211-278N7, complete sequence Length = 99968 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1765 atttatttatttatatctgtg 1785 ||||||||||||||||||||| Sbjct: 61503 atttatttatttatatctgtg 61483
>gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, complete sequence Length = 188634 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 185301 ctgcttctgcttctgcttctc 185281
>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete sequence Length = 144566 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 139721 agaaaggaaacaaaacaaaac 139701
>emb|AJ324751.1|HSA324751 Homo sapiens genomic sequence surrounding NotI site, clone NL6-BD11C Length = 653 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ctccccgtccgcctccgtccc 38 ||||||||||||||||||||| Sbjct: 109 ctccccgtccgcctccgtccc 129
>dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727A23, complete sequence Length = 174905 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1709 gaaaggaaacaaaacaaaacc 1729 ||||||||||||||||||||| Sbjct: 90777 gaaaggaaacaaaacaaaacc 90757
>gb|AF137263.1|AF137263 Bacteroides thetaiotaomicron 30S ribosomal protein S16-like protein, fucose gene cluster, and RNA polymerase sigma factor SigZ-like protein (sigZ) genes, complete cds Length = 10671 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcttctgcttctgcttctccg 201 ||||||||||||||||||||| Sbjct: 989 gcttctgcttctgcttctccg 969
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gccgcgcgccgcgcatctcga 235 ||||||||||||||||||||| Sbjct: 3051955 gccgcgcgccgcgcatctcga 3051935
>emb|CT571242.10| Mouse DNA sequence from clone RP24-82P13 on chromosome 17, complete sequence Length = 236078 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 10084 ctgcttctgcttctgcttctc 10104
>emb|CT025557.11| Mouse DNA sequence from clone RP23-356F21 on chromosome 13, complete sequence Length = 186496 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 116881 cctgcttctgcttctgcttct 116861
>emb|BX005145.8| Zebrafish DNA sequence from clone CH211-120O1, complete sequence Length = 181056 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 gctcctgattggtgctccgcgtgcg 274 ||||||||||||||||||| ||||| Sbjct: 161968 gctcctgattggtgctccgagtgcg 161992
>ref|XM_726211.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03308) partial mRNA Length = 3183 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 1691 cctgcttctgcttctgcttct 1671
>ref|XM_724473.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01765) partial mRNA Length = 3894 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 3275 cctgcttctgcttctgcttct 3255
>gb|AF037027.1|AF037027 Zea mays peroxidase R15 mRNA, partial cds Length = 292 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 57 ctgcttctgcttctgcttctc 37
>gb|AF012870.1|MUSMERG1 Mus musculus potassium channel isoforms Merg1a and Merg1a' (Merg1) gene, exons 1 and 2 Length = 4410 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cggagaccacggcccggccag 85 ||||||||||||||||||||| Sbjct: 490 cggagaccacggcccggccag 510
>ref|NM_013569.1| Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 2 (Kcnh2), mRNA gb|AF012868.1|AF012868 Mus musculus ether-a-go-go-related protein isoform Merg1a (Merg1) mRNA, complete cds Length = 4235 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cggagaccacggcccggccag 85 ||||||||||||||||||||| Sbjct: 231 cggagaccacggcccggccag 251
>ref|NM_007499.1| Mus musculus ataxia telangiectasia mutated homolog (human) (Atm), mRNA gb|U43678.1|MMU43678 Mus musculus ataxia telangiectasia gene homolog (Atm) mRNA, complete cds Length = 9620 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1801 agaatgtccttagagcttgctcctt 1825 |||||||||||||||| |||||||| Sbjct: 6820 agaatgtccttagagcatgctcctt 6796
>emb|BX000434.11| Zebrafish DNA sequence from clone CH211-2E18, complete sequence Length = 179109 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 gctcctgattggtgctccgcgtgcg 274 ||||||||||||||||||| ||||| Sbjct: 162572 gctcctgattggtgctccgagtgcg 162596
>emb|AL805955.26| Mouse DNA sequence from clone RP23-192A6 on chromosome 2, complete sequence Length = 182439 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 111509 agaaaggaaacaaaacaaaac 111529
>gb|AC124471.4| Mus musculus BAC clone RP24-79D7 from 12, complete sequence Length = 179503 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 49108 cctgcttctgcttctgcttct 49128
>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete sequence Length = 194387 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1628 aaaggaagagctctgaagctgaaca 1652 ||||||||| ||||||||||||||| Sbjct: 135705 aaaggaagacctctgaagctgaaca 135729
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144767 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 41737 cctgcttctgcttctgcttct 41757
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 155950 cctgcttctgcttctgcttct 155970
>gb|AC129780.5| Mus musculus BAC clone RP23-44N12 from 13, complete sequence Length = 125690 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gattccgcccgcgcccgctcc 254 ||||||||||||||||||||| Sbjct: 26741 gattccgcccgcgcccgctcc 26761
>gb|AC134590.5| Mus musculus BAC clone RP23-368K22 from 9, complete sequence Length = 180271 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaac 1728 ||||||||||||||||||||| Sbjct: 69141 agaaaggaaacaaaacaaaac 69121
>gb|AC140318.4| Mus musculus BAC clone RP23-400F19 from 9, complete sequence Length = 180211 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 109329 cctgcttctgcttctgcttct 109309
>emb|AL808105.15| Mouse DNA sequence from clone RP23-22G24 on chromosome 4, complete sequence Length = 252003 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ctgcttctgcttctgcttctc 199 ||||||||||||||||||||| Sbjct: 99962 ctgcttctgcttctgcttctc 99982
>gb|U71206.1|MMU71206 Mus musculus Ptx1 mRNA, complete cds Length = 2463 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gattccgcccgcgcccgctcc 254 ||||||||||||||||||||| Sbjct: 37 gattccgcccgcgcccgctcc 57
>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete sequence Length = 174305 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 720 aggaggcttgcctggcatctc 740 ||||||||||||||||||||| Sbjct: 31633 aggaggcttgcctggcatctc 31653
>emb|AL928669.6| Mouse DNA sequence from clone RP23-375I1 on chromosome 2, complete sequence Length = 21827 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 930 ctttgaaagccatgtgggatg 950 ||||||||||||||||||||| Sbjct: 6316 ctttgaaagccatgtgggatg 6296
>emb|AL773592.5| Mouse DNA sequence from clone RP23-336B11 on chromosome 4, complete sequence Length = 219956 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 117371 cctgcttctgcttctgcttct 117391
>gb|AC154540.2| Mus musculus BAC clone RP23-452G1 from chromosome 16, complete sequence Length = 171663 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1708 agaaaggaaacaaaacaaaacctca 1732 |||||||||||||||||||| |||| Sbjct: 148440 agaaaggaaacaaaacaaaaactca 148416
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete sequence Length = 248940 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 74667 cctgcttctgcttctgcttct 74687
>emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chromosome 1, complete sequence Length = 150434 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1758 agctggaatttatttatttat 1778 ||||||||||||||||||||| Sbjct: 147676 agctggaatttatttatttat 147696
>gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome 9, complete sequence Length = 254666 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 13987 cctgcttctgcttctgcttct 14007
>dbj|AP001542.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-703I16, complete sequences Length = 47152 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctgcttctgcttctgcttct 198 ||||||||||||||||||||| Sbjct: 24684 cctgcttctgcttctgcttct 24704 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 358,933,100 Number of extensions: 22413189 Number of successful extensions: 1520301 Number of sequences better than 10.0: 215 Number of HSP's gapped: 1520186 Number of HSP's successfully gapped: 299 Length of query: 1929 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1906 Effective length of database: 18,503,978,556 Effective search space: 35268583127736 Effective search space used: 35268583127736 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
