ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61f11 |
|---|---|
| Clone Library Name | barley_pub |
>Q8Z8H0:RIHA_SALTI Pyrimidine-specific ribonucleoside hydrolase rihA - Salmonella typhi| Length = 311 Score = 186 bits (473), Expect = 1e-46 Identities = 108/288 (37%), Positives = 164/288 (56%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +IID DPG DD++A ++A +P +EV +T+ GN T RN L + RPD+P Sbjct: 3 LPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEP+ TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P TK+ +IV++GGA A GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-ALGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + AD+ R G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHAADIERFRDIGNPISTIVAELLDFFFEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PE+FT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYYFLTGNKPNA 288
>Q5PM78:RIHA_SALPA Pyrimidine-specific ribonucleoside hydrolase rihA - Salmonella| paratyphi-a Length = 311 Score = 186 bits (471), Expect = 3e-46 Identities = 107/288 (37%), Positives = 163/288 (56%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +IID DPG DD++A ++A +P +EV +T+ GN T RN L + RPD+P Sbjct: 3 LPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEP+ TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESSQPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P K+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHAKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GLN+T + AD+ R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLNVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PE+FT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYYFLTGNKPNA 288
>Q8ZQY4:RIHA_SALTY Pyrimidine-specific ribonucleoside hydrolase rihA - Salmonella| typhimurium Length = 311 Score = 183 bits (465), Expect = 1e-45 Identities = 107/288 (37%), Positives = 164/288 (56%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +IID DPG DD++A ++A +P +EV +T+ GN T RN L + R D+P Sbjct: 3 LPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRLDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEP+ TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P TK+ +IV++GGA A GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-ALGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + AD+ R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PE+FT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYYFLTGNKPNA 288
>Q3Z044:RIHB_SHISS Pyrimidine-specific ribonucleoside hydrolase rihB - Shigella sonnei| (strain Ss046) Length = 313 Score = 181 bits (459), Expect = 6e-45 Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 2/279 (0%) Frame = +3 Query: 189 ETMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD 368 E K+I+D DPG DD++A MMA + P +++LG+T + GN T N L +C+K + Sbjct: 2 EKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EIN 60 Query: 369 VPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQT-ATEFLVDMVSQFPGE 545 VPV G +P+ + VAD +HG GL V EP T++AE T A ++++D + G+ Sbjct: 61 VPVYAGMPQPIMR-QQIVADNIHGETGLDG-PVFEPLTRQAESTHAVKYIIDTLMASDGD 118 Query: 546 VSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 725 ++++ +GPL+N+A+AM+M P+ + K+++IV++GGA+ GN TPSAE NI +DPEAA +V Sbjct: 119 ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNIFADPEAARVV 177 Query: 726 FTSGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 FTSG + ++GL++T Q T ++ + +GG + DI F +YG Sbjct: 178 FTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGEMFSDIMNFTLKTQFENYGLAGGP 237 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVE-TQGICRGHTSMD 1019 +HD L+ P+ ++ V V+ G C G T D Sbjct: 238 VHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCD 276
>P33022:RIHB_ECOLI Pyrimidine-specific ribonucleoside hydrolase rihB - Escherichia coli| Length = 313 Score = 181 bits (459), Expect = 6e-45 Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 2/279 (0%) Frame = +3 Query: 189 ETMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD 368 E K+I+D DPG DD++A MMA + P +++LG+T + GN T N L +C+K + Sbjct: 2 EKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EIN 60 Query: 369 VPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQT-ATEFLVDMVSQFPGE 545 VPV G +P+ + VAD +HG GL V EP T++AE T A ++++D + G+ Sbjct: 61 VPVYAGMPQPIMR-QQIVADNIHGETGLDG-PVFEPLTRQAESTHAVKYIIDTLMASDGD 118 Query: 546 VSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 725 ++++ +GPL+N+A+AM+M P+ + K+++IV++GGA+ GN TPSAE NI +DPEAA +V Sbjct: 119 ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNIFADPEAARVV 177 Query: 726 FTSGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 FTSG + ++GL++T Q T ++ + +GG + DI F +YG Sbjct: 178 FTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGP 237 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVE-TQGICRGHTSMD 1019 +HD L+ P+ ++ V V+ G C G T D Sbjct: 238 VHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCD 276
>Q8FFT8:RIHB_ECOL6 Pyrimidine-specific ribonucleoside hydrolase rihB - Escherichia coli| O6 Length = 313 Score = 181 bits (459), Expect = 6e-45 Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 2/279 (0%) Frame = +3 Query: 189 ETMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD 368 E K+I+D DPG DD++A MMA + P +++LG+T + GN T N L +C+K + Sbjct: 2 EKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EIN 60 Query: 369 VPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQT-ATEFLVDMVSQFPGE 545 VPV G +P+ + VAD +HG GL V EP T++AE T A ++++D + G+ Sbjct: 61 VPVYAGMPQPIMR-QQIVADNIHGETGLDG-PVFEPLTRQAENTHAVKYIIDTLMASDGD 118 Query: 546 VSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 725 ++++ +GPL+N+A+AM+M P+ + K+++IV++GGA+ GN TPSAE NI +DPEAA +V Sbjct: 119 ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNIFADPEAARVV 177 Query: 726 FTSGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 FTSG + ++GL++T Q T ++ + +GG + DI F +YG Sbjct: 178 FTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGP 237 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVE-TQGICRGHTSMD 1019 +HD L+ P+ ++ V V+ G C G T D Sbjct: 238 VHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCD 276
>Q8XE94:RIHB_ECO57 Pyrimidine-specific ribonucleoside hydrolase rihB - Escherichia coli| O157:H7 Length = 313 Score = 181 bits (459), Expect = 6e-45 Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 2/279 (0%) Frame = +3 Query: 189 ETMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD 368 E K+I+D DPG DD++A MMA + P +++LG+T + GN T N L +C+K + Sbjct: 2 EKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EIN 60 Query: 369 VPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQT-ATEFLVDMVSQFPGE 545 VPV G +P+ + VAD +HG GL V EP T++AE T A ++++D + G+ Sbjct: 61 VPVYAGMPQPIMR-QQIVADNIHGDTGLDG-PVFEPLTRQAESTHAVKYIIDTLMASDGD 118 Query: 546 VSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 725 ++++ +GPL+N+A+AM+M P+ + K+++IV++GGA+ GN TPSAE NI +DPEAA +V Sbjct: 119 ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNIFADPEAARVV 177 Query: 726 FTSGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 FTSG + ++GL++T Q T ++ + +GG + DI F +YG Sbjct: 178 FTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGP 237 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVE-TQGICRGHTSMD 1019 +HD L+ P+ ++ V V+ G C G T D Sbjct: 238 VHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCD 276
>Q57RR6:RIHA_SALCH Pyrimidine-specific ribonucleoside hydrolase rihA - Salmonella| choleraesuis Length = 311 Score = 180 bits (457), Expect = 1e-44 Identities = 105/288 (36%), Positives = 162/288 (56%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +IID DPG DD++A ++A +P +EV +T+ GN T RN L + RPD+P Sbjct: 3 LPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEP+ TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P TK+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + AD+ R G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHAADIERFRDIGNPISTIVAELLDFFFEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 P + A L++PE+FT + V VET+G +G T +D N NA Sbjct: 241 APCTIAWLLKPEIFTTVERWVGVETKGKYTQGMTVVDYYFLTGNKPNA 288
>Q83KF1:RIHB_SHIFL Pyrimidine-specific ribonucleoside hydrolase rihB - Shigella flexneri| Length = 313 Score = 178 bits (451), Expect = 5e-44 Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 2/279 (0%) Frame = +3 Query: 189 ETMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD 368 E K+I+D +PG DD++A MMA + P +++LG+T + GN T N L +C+K + Sbjct: 2 EKRKIILDCEPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EIN 60 Query: 369 VPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQT-ATEFLVDMVSQFPGE 545 VPV G +P+ K VAD +HG GL V EP T++AE T A ++++D + G+ Sbjct: 61 VPVYAGMPQPIMR-KQIVADNIHGETGLDG-PVFEPLTRQAESTHAVKYIIDTLMASDGD 118 Query: 546 VSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 725 ++++ +GPL+N+A+AM+M P+ + K+++IV++GGA+ GN TPSAE NI +DPEAA +V Sbjct: 119 ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNIFADPEAARVV 177 Query: 726 FTSGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 FTSG + ++GL++T Q T ++ + GG + DI F YG Sbjct: 178 FTSGVPLVMMGLDLTNQTVCTPDVIARMERVGGPAGELFSDIMNFTLKTQFEYYGLAGGP 237 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVE-TQGICRGHTSMD 1019 +HD L+ P+ + V V+ G C G T D Sbjct: 238 VHDATCIGYLINPDGIKTQDMYVEVDVNSGPCYGRTVCD 276
>Q8FJY8:RIHA_ECOL6 Pyrimidine-specific ribonucleoside hydrolase rihA - Escherichia coli| O6 Length = 311 Score = 178 bits (451), Expect = 5e-44 Identities = 103/288 (35%), Positives = 160/288 (55%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +++D DPG DD++A ++A +P ++V +T+ GN T RN L + R D+P Sbjct: 3 LPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL +AD VHG GL ++PEPT TA E + + + V++ Sbjct: 63 VASGAVKPLMRNLI-IADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESEEPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P +K+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + D R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PELFT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYYLTGNKPNA 288
>Q3Z4E1:RIHA_SHISS Pyrimidine-specific ribonucleoside hydrolase rihA - Shigella sonnei| (strain Ss046) Length = 311 Score = 177 bits (449), Expect = 9e-44 Identities = 103/288 (35%), Positives = 161/288 (55%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +++D DPG DD++A ++A +P ++V +T+ GN T RN L + R D+P Sbjct: 3 LPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEPT TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P +K+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + D R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PELFT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPELFTTVERWVGVETQGKYSQGMTVVDYYYLTGNKPNA 288
>Q83LY1:RIHA_SHIFL Pyrimidine-specific ribonucleoside hydrolase rihA - Shigella flexneri| Length = 311 Score = 177 bits (449), Expect = 9e-44 Identities = 103/288 (35%), Positives = 161/288 (55%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +++D DPG DD++A ++A +P ++V +T+ GN T RN L + R D+P Sbjct: 3 LPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEPT TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P +K+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + D R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PELFT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYYLTGNKPNA 288
>P41409:RIHA_ECOLI Pyrimidine-specific ribonucleoside hydrolase rihA - Escherichia coli| Length = 311 Score = 177 bits (449), Expect = 9e-44 Identities = 103/288 (35%), Positives = 161/288 (55%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +++D DPG DD++A ++A +P ++V +T+ GN T RN L + R D+P Sbjct: 3 LPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEPT TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P +K+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + D R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PELFT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNA 288
>Q8XBL8:RIHA_ECO57 Pyrimidine-specific ribonucleoside hydrolase rihA - Escherichia coli| O157:H7 Length = 311 Score = 177 bits (449), Expect = 9e-44 Identities = 103/288 (35%), Positives = 161/288 (55%), Gaps = 2/288 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + +++D DPG DD++A ++A +P ++V +T+ GN T RN L + R D+P Sbjct: 3 LPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIP 62 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 VA G+ +PL + +AD VHG GL ++PEPT TA E + + + V++ Sbjct: 63 VAGGAVKPLMR-ELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTI 121 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 ++ GP TN+AL + P +K+ +IV++GGA GN TP+AE NI+ DPEAA+IVF S Sbjct: 122 VSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-GLGNWTPAAEFNIYVDPEAAEIVFQS 180 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHL-HSYGDPAVFLH 911 G + + GL++T + D R+ G + + ++ F+ ++H +G LH Sbjct: 181 GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDMGLKKFNSENA 1052 DP + A L++PELFT + V VETQG +G T +D N NA Sbjct: 241 DPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYYLTGNKPNA 288
>P83851:IUNH_LEIMA Inosine-uridine preferring nucleoside hydrolase - Leishmania major| Length = 314 Score = 175 bits (443), Expect = 4e-43 Identities = 103/277 (37%), Positives = 164/277 (59%), Gaps = 3/277 (1%) Frame = +3 Query: 198 KLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVPV 377 K+I+D DPGIDD+VA +A P +E+L +TT+ GN + T+NA ++ + AG VPV Sbjct: 4 KIILDCDPGIDDAVAIFLAHGNPEIELLAITTVVGNQSLEKVTQNARLVADVAGIVGVPV 63 Query: 378 AEGSAEPLKGGKPQVADFVHGSDGLGNISV-PEPTTKKAEQTATEFLVDMV-SQFPGEVS 551 A G +PL G + A +HG G+GN+S PE TK + A + ++D++ S P ++ Sbjct: 64 AAGCTKPLVRG-VRNASHIHGETGMGNVSYPPEFKTKLDGRHAVQLIIDLIMSHEPKTIT 122 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++ G LTN+A+A++++P V +VK++V++GG + GNA+P AE N+ DPEAA IVF Sbjct: 123 LVPTGGLTNIAMAVRLEPRIVDRVKEVVLMGGGYH-TGNASPVAEFNVFIDPEAAHIVFN 181 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLH 911 ++ +VGL++T Q T A +R G K A F+ I FY+ + + D +H Sbjct: 182 ESWNVTMVGLDLTHQALATPAVQKRVREVGTKPAAFMLQILDFYTKVYEKEH-DTYGKVH 240 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMD 1019 DP + A ++ P + T + V +E G + G T +D Sbjct: 241 DPCAVAYVIDPTVMTTERVPVDIELNGALTTGMTVVD 277
>Q27546:IUNH_CRIFA Inosine-uridine preferring nucleoside hydrolase - Crithidia| fasciculata Length = 315 Score = 171 bits (434), Expect = 5e-42 Identities = 106/313 (33%), Positives = 171/313 (54%), Gaps = 2/313 (0%) Frame = +3 Query: 198 KLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVPV 377 K+I+D DPG+DD+VA ++A P +E+L +TT+ GN T A TRNA ++ + AG VP+ Sbjct: 4 KIILDCDPGLDDAVAILLAHGNPEIELLAITTVVGNQTLAKVTRNAQLVADIAGITGVPI 63 Query: 378 AEGSAEPLKGGKPQVADFVHGSDGLGNISVP-EPTTKKAEQTATEFLVDMV-SQFPGEVS 551 A G +PL K A +HG G+G ++ P E K E+ A ++D+V S P ++ Sbjct: 64 AAGCDKPLVR-KIMTAGHIHGESGMGTVAYPAEFKNKVDERHAVNLIIDLVMSHEPKTIT 122 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++ G LTN+A+A +++P V +VK++V++GG + GNAT AE NI DPEAA IVF Sbjct: 123 LVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYHE-GNATSVAEFNIIIDPEAAHIVFN 181 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLH 911 + +VGL++T Q T L ++ A+F+ +I +Y+ + + A +H Sbjct: 182 ESWQVTMVGLDLTHQALATPPILQRVKEVDTNPARFMLEIMDYYTKIYQSNRYMAAAAVH 241 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQGICRGHTSMDMGLKKFNSENAWSGYTPISVAWTV 1091 DP + A ++ P + T + V +E G + +G+ + N + VA + Sbjct: 242 DPCAVAYVIDPSVMTTERVPVDIELTG------KLTLGMTVADFRNPRPEHCHTQVAVKL 295 Query: 1092 DTAKVVALVKELL 1130 D K LV + L Sbjct: 296 DFEKFWGLVLDAL 308
>Q6LQG2:RIHA_PHOPR Pyrimidine-specific ribonucleoside hydrolase rihA - Photobacterium| profundum (Photobacterium sp. (strain SS9)) Length = 310 Score = 170 bits (430), Expect = 1e-41 Identities = 108/313 (34%), Positives = 168/313 (53%), Gaps = 1/313 (0%) Frame = +3 Query: 201 LIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVPVA 380 +IID DPG DD++A ++A +P +++ +TT GN T NAL + GR D+PVA Sbjct: 5 IIIDCDPGHDDAIALILACASPELDIKAVTTSAGNQTPEKTLHNALRILTLVGRTDIPVA 64 Query: 381 EGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSVLA 560 G+ +PL + +AD VHG GL +PEP + A E + ++++ V+++ Sbjct: 65 GGALQPLSR-ELIIADNVHGETGLDGPVLPEPAFEPQPCHAVELMAKILTEATEPVTLVP 123 Query: 561 LGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTSGA 740 GPLTN+AL + +++ IV++GG+ AGN TP+AE NI+ DPEAADIVF SG Sbjct: 124 TGPLTNIALLLATHRELHSQIDSIVLMGGSA-EAGNWTPAAEFNIYVDPEAADIVFKSGI 182 Query: 741 DIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLH-SYGDPAVFLHDP 917 I + GL++T + + D+ ++R AQ ++ F+ +H +G LHDP Sbjct: 183 PITMCGLDVTHRAQIMDEDIEKIRKINNPVAQVTAELLDFFMIYHRDPKWGFEGAPLHDP 242 Query: 918 VSFAALVRPELFTFRKGVVRVETQGICRGHTSMDMGLKKFNSENAWSGYTPISVAWTVDT 1097 + A L+ PELF V +ETQG HT +G+ + +V + V+ Sbjct: 243 CTIAWLLEPELFASINCWVGIETQG---SHT---LGMTVVDRYQLTDNPINTTVLFDVNR 296 Query: 1098 AKVVALVKELLSN 1136 V L+ E L+N Sbjct: 297 QGFVDLLAERLAN 309
>Q8EIM7:RIHA_SHEON Pyrimidine-specific ribonucleoside hydrolase rihA - Shewanella| oneidensis Length = 318 Score = 167 bits (424), Expect = 7e-41 Identities = 102/278 (36%), Positives = 153/278 (55%), Gaps = 2/278 (0%) Frame = +3 Query: 192 TMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDV 371 T +I+D DPG DD++A ++A P + L +TT GN T NAL + R D+ Sbjct: 2 TCPIILDCDPGHDDAIALILALAHPDLVPLAVTTSAGNQTPDKTLNNALRILTLLNRSDI 61 Query: 372 PVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVS 551 PVA G+A+PL +AD VHG GL ++P P+ TA E + + + V+ Sbjct: 62 PVAGGAAKPLARDLI-IADNVHGETGLDGPALPNPSFSPQAITAVELMAQQIRKSHQPVT 120 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++ GPLTN+AL + K+++IV++GGA GN TP+AE NI DPEAADIVF Sbjct: 121 LIPTGPLTNIALLLASHSELHDKIERIVLMGGAA-GVGNWTPAAEFNIFVDPEAADIVFK 179 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLH-SYGDPAVFL 908 SG I + GL++T Q + D+ +R+ A+ + ++ F+ +H +G L Sbjct: 180 SGIPITMCGLDVTHQAQIMDEDIERIRAIPNPVAKCVAELLDFFMIYHRDPKWGFVGAPL 239 Query: 909 HDPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMD 1019 HDP + A L++PELF + V +ETQ + G T +D Sbjct: 240 HDPCTIAWLLKPELFDAQDCWVGIETQSELTLGMTVVD 277
>Q3Z5Y0:RIHC_SHISS Nonspecific ribonucleoside hydrolase rihC - Shigella sonnei (strain| Ss046) Length = 304 Score = 153 bits (386), Expect = 2e-36 Identities = 103/280 (36%), Positives = 153/280 (54%), Gaps = 4/280 (1%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + + +DTDPGIDD+VA A AP +++ +TT+ GN + TRNAL L ++P Sbjct: 3 LPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLH-FWNAEIP 61 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 +A+G+A PL P+ A VHG G+ E K A + D + + P V++ Sbjct: 62 LAQGAAVPLVRA-PRDAASVHGESGMAGYDFVEHNRKPIGIPAFLAIRDALMRAPEPVTL 120 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 +A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI +DPEAA VF S Sbjct: 121 VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSS-GRGNCTPNAEFNIAADPEAAACVFRS 179 Query: 735 GADIAVVGLNITTQVSFTE---ADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 G +I + GL++T Q T A L EL +G + L + Y + S + Sbjct: 180 GIEIVMCGLDVTNQAILTPDYLATLPELNRTG----KMLHALFSHYRSGSMQS----GLR 231 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDM 1022 +HD + A LVRP+LFT + V VETQG G T +D+ Sbjct: 232 MHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDI 271
>P22564:RIHC_ECOLI Nonspecific ribonucleoside hydrolase rihC - Escherichia coli| Length = 304 Score = 152 bits (385), Expect = 2e-36 Identities = 101/277 (36%), Positives = 151/277 (54%), Gaps = 1/277 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + + +DTDPGIDD+VA A AP +++ +TT+ GN + TRNAL L ++P Sbjct: 3 LPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLH-FWNAEIP 61 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 +A+G+A PL P+ A VHG G+ E K A + D + + P V++ Sbjct: 62 LAQGAAVPLVRA-PRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTL 120 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 +A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI +DPEAA VF S Sbjct: 121 VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSA-GRGNCTPNAEFNIAADPEAAACVFRS 179 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLHD 914 G +I + GL++T Q T LS L + + L + Y + S + +HD Sbjct: 180 GIEIVMCGLDVTNQAILTPDYLSTLPQL-NRTGKMLHALFSHYRSGSMQS----GLRMHD 234 Query: 915 PVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDM 1022 + A LVRP+LFT + V VETQG G T +D+ Sbjct: 235 LCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDI 271
>P0C0W2:RIHC_ECOL6 Nonspecific ribonucleoside hydrolase rihC - Escherichia coli O6| Length = 304 Score = 152 bits (385), Expect = 2e-36 Identities = 103/280 (36%), Positives = 153/280 (54%), Gaps = 4/280 (1%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + + +DTDPGIDD+VA A AP +++ +TT+ GN + TRNAL L ++P Sbjct: 3 LPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLH-FWNAEIP 61 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 +A+G+A PL P+ A VHG G+ E + A + D + + P V++ Sbjct: 62 LAQGAAVPLVRA-PRDAASVHGESGMAGYDFVEHNRQPLGIPAFLAIRDALMRAPEPVTL 120 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 +A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI +DPEAA VF S Sbjct: 121 VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSA-GRGNCTPNAEFNIAADPEAAACVFRS 179 Query: 735 GADIAVVGLNITTQVSFTE---ADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 G +I + GL++T Q T A L EL +G + L + Y + S + Sbjct: 180 GIEIVMCGLDVTNQAILTPDYLATLPELNRTG----KMLHALFSHYRSGSMQS----GLR 231 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDM 1022 +HD + A LVRPELFT + V VETQG G T +D+ Sbjct: 232 MHDLCAIAWLVRPELFTLKPCFVAVETQGEFTSGTTVVDI 271
>Q8XA41:RIHC_ECO57 Nonspecific ribonucleoside hydrolase rihC - Escherichia coli O157:H7| Length = 304 Score = 152 bits (385), Expect = 2e-36 Identities = 101/277 (36%), Positives = 151/277 (54%), Gaps = 1/277 (0%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + + +DTDPGIDD+VA A AP +++ +TT+ GN + TRNAL L ++P Sbjct: 3 LPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLH-FWNAEIP 61 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 +A+G+A PL P+ A VHG G+ E K A + D + + P V++ Sbjct: 62 LAQGAAVPLVRA-PRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTL 120 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 +A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI +DPEAA VF S Sbjct: 121 VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSA-GRGNCTPNAEFNIAADPEAAACVFRS 179 Query: 735 GADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLHD 914 G +I + GL++T Q T LS L + + L + Y + S + +HD Sbjct: 180 GIEIVMCGLDVTNQAILTPDYLSTLPQL-NRTGKMLHALFSHYRSGSMQS----GLRMHD 234 Query: 915 PVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDM 1022 + A LVRP+LFT + V VETQG G T +D+ Sbjct: 235 LCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDI 271
>Q83MH0:RIHC_SHIFL Nonspecific ribonucleoside hydrolase rihC - Shigella flexneri| Length = 304 Score = 152 bits (384), Expect = 3e-36 Identities = 103/280 (36%), Positives = 153/280 (54%), Gaps = 4/280 (1%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 + + +DTDPGIDD+VA A AP +++ +TT+ GN + TRNAL L ++P Sbjct: 3 LPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLH-FWNAEIP 61 Query: 375 VAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSV 554 +A+G+A PL P+ A VHG G+ E K A + D + + P V++ Sbjct: 62 LAQGAAVPLVRA-PRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTL 120 Query: 555 LALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTS 734 +A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI +DPEAA VF S Sbjct: 121 VAIGPLTNIALLLLQCPECKPYIRRLVIMGGSA-GRGNCTPNAEFNIAADPEAAACVFRS 179 Query: 735 GADIAVVGLNITTQVSFTE---ADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVF 905 G +I + GL++T Q T A L EL +G + L + Y + S + Sbjct: 180 GIEIVMCGLDVTNQAILTPDYLATLPELNRTG----KMLHALFSHYRSGSMQS----GLR 231 Query: 906 LHDPVSFAALVRPELFTFRKGVVRVETQG-ICRGHTSMDM 1022 +HD + A LVRP+LFT + V VETQG G T +D+ Sbjct: 232 MHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDI 271
>Q8ZRY7:RIHC_SALTY Nonspecific ribonucleoside hydrolase rihC - Salmonella typhimurium| Length = 306 Score = 150 bits (378), Expect = 2e-35 Identities = 94/267 (35%), Positives = 149/267 (55%) Frame = +3 Query: 192 TMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDV 371 ++ +I+DTDPGIDD+ A A AP +++ +TT+ GN + TRNAL L D+ Sbjct: 4 SLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSVEKTTRNALQLLH-FWNSDI 62 Query: 372 PVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVS 551 P+A+G+A PL A +VHG G+ + + + A + D++ P ++ Sbjct: 63 PLAQGAATPLLRPLRDAA-YVHGESGMEGYDFVDHQRQPLAKPAFIAIRDVLMNAPEPMT 121 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI DPEAA +VF Sbjct: 122 LVAIGPLTNIALLLMHYPECACNIRRLVLMGGSA-GRGNFTPNAEFNIAVDPEAAALVFR 180 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLH 911 SG +I + GL++T Q + L++L + + + L + Y + + V +H Sbjct: 181 SGLEIVMCGLDVTNQAMLSPDFLNKLPAL-NRTGKMLHSLFNHYRSGSMRT----GVRMH 235 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG 992 D + A LVRPELFT + V VETQG Sbjct: 236 DLCAIAWLVRPELFTLQSCFVAVETQG 262
>Q8Z9M9:RIHC_SALTI Nonspecific ribonucleoside hydrolase rihC - Salmonella typhi| Length = 306 Score = 150 bits (378), Expect = 2e-35 Identities = 94/267 (35%), Positives = 149/267 (55%) Frame = +3 Query: 192 TMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDV 371 ++ +I+DTDPGIDD+ A A AP +++ +TT+ GN + TRNAL L D+ Sbjct: 4 SLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSVEKTTRNALQLLH-FWNSDI 62 Query: 372 PVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVS 551 P+A+G+A PL A +VHG G+ + + + A + D++ P ++ Sbjct: 63 PLAQGAATPLLRPLRDAA-YVHGESGMEGYDFVDHQRQPLAKPAFIAIRDVLMNAPEPMT 121 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI DPEAA +VF Sbjct: 122 LVAIGPLTNIALLLMHYPECACNIRRLVLMGGSA-GRGNFTPNAEFNIAVDPEAAALVFR 180 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLH 911 SG +I + GL++T Q + L++L + + + L + Y + + V +H Sbjct: 181 SGLEIVMCGLDVTNQAMLSPDFLNKLPAL-NRTGKMLHSLFNHYRSGSMRT----GVRMH 235 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG 992 D + A LVRPELFT + V VETQG Sbjct: 236 DLCAIAWLVRPELFTLQSCFVAVETQG 262
>Q57TL0:RIHC_SALCH Nonspecific ribonucleoside hydrolase rihC - Salmonella choleraesuis| Length = 306 Score = 150 bits (378), Expect = 2e-35 Identities = 94/267 (35%), Positives = 149/267 (55%) Frame = +3 Query: 192 TMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDV 371 ++ +I+DTDPGIDD+ A A AP +++ +TT+ GN + TRNAL L D+ Sbjct: 4 SLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSVEKTTRNALQLLH-FWNSDI 62 Query: 372 PVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVS 551 P+A+G+A PL A +VHG G+ + + + A + D++ P ++ Sbjct: 63 PLAQGAATPLLRPLRDAA-YVHGESGMEGYDFVDHQRQPLAKPAFIAIRDVLMNAPEPMT 121 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI DPEAA +VF Sbjct: 122 LVAIGPLTNIALLLMHYPECACNIRRLVLMGGSA-GRGNFTPNAEFNIAVDPEAAALVFR 180 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLH 911 SG +I + GL++T Q + L++L + + + L + Y + + V +H Sbjct: 181 SGLEIVMCGLDVTNQAMLSPDFLNKLPAL-NRTGKMLHSLFNHYRSGSMRT----GVRMH 235 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG 992 D + A LVRPELFT + V VETQG Sbjct: 236 DLCAIAWLVRPELFTLQSCFVAVETQG 262
>Q5PKI2:RIHC_SALPA Nonspecific ribonucleoside hydrolase rihC - Salmonella paratyphi-a| Length = 304 Score = 148 bits (373), Expect = 6e-35 Identities = 94/267 (35%), Positives = 148/267 (55%) Frame = +3 Query: 192 TMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDV 371 ++ +I+DTDPGIDD+ A A AP +++ +TT+ GN + TRNAL L D+ Sbjct: 4 SLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSVEKTTRNALQLLH-FWNSDI 62 Query: 372 PVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVS 551 P+A+G+A PL A +VHG G+ + + + A + D++ P ++ Sbjct: 63 PLAQGAATPLLRPLRDAA-YVHGESGMEGYDFVDHQRQPLAKPAFISIRDVLMNAPEPMT 121 Query: 552 VLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 731 ++A+GPLTN+AL + P ++++V++GG+ GN TP+AE NI DPEAA VF Sbjct: 122 LVAIGPLTNIALLLMHYPECACNIRRLVLMGGSA-GRGNFTPNAEFNIAVDPEAAAHVFR 180 Query: 732 SGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLH 911 SG +I + GL++T Q + L++L + + + L + Y + + V +H Sbjct: 181 SGIEIVMCGLDVTNQAMLSPDFLNKLPAL-NRTGKMLHSLFNHYRSGSMRT----GVRMH 235 Query: 912 DPVSFAALVRPELFTFRKGVVRVETQG 992 D + A LVRPELFT + V VETQG Sbjct: 236 DLCAIAWLVRPELFTLQSCFVAVETQG 262
>Q32ER0:RIHB_SHIDS Putative pyrimidine-specific ribonucleoside hydrolase rihB - Shigella| dysenteriae serotype 1 (strain Sd197) Length = 271 Score = 140 bits (354), Expect = 9e-33 Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 2/232 (0%) Frame = +3 Query: 330 NALILCEKAGRPDVPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQT-AT 506 N L +C+K +VPV G +P+ + VAD +HG GL V EP T++AE T A Sbjct: 7 NGLNVCQKL-EINVPVYAGMPQPIMR-QQIVADNIHGETGLDG-PVFEPLTRQAESTHAV 63 Query: 507 EFLVDMVSQFPGEVSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAE 686 ++++D + G+++++ +GPL+N+A+AM+M P+ + K+++IV++GGA+ GN TPSAE Sbjct: 64 KYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNFTPSAE 122 Query: 687 ANIHSDPEAADIVFTSGADIAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYS 866 NI +DPEAA +VFTSG + ++GL++T Q T ++ + +GG + DI F Sbjct: 123 FNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTL 182 Query: 867 DWHLHSYGDPAVFLHDPVSFAALVRPELFTFRKGVVRVE-TQGICRGHTSMD 1019 +YG +HD L+ P+ + V V+ G C G T D Sbjct: 183 KTQFENYGLAGGPVHDATCIGYLINPDGIKTQDMYVEVDVNSGPCYGRTVCD 234
>Q10314:YD62_SCHPO Uncharacterized protein C17G8.02 - Schizosaccharomyces pombe (Fission| yeast) Length = 330 Score = 134 bits (336), Expect = 1e-30 Identities = 92/283 (32%), Positives = 148/283 (52%), Gaps = 5/283 (1%) Frame = +3 Query: 189 ETMKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD 368 E + ID DPG DD VA +A A ++LG++T+ GN T + T+NAL + E + D Sbjct: 15 ENYNIWIDCDPGHDDVVALTLAACAGHCKILGVSTVHGNTTLEFTTKNALAVMELLNQ-D 73 Query: 369 VPVAEGSAEPLKGGKPQVADFVHGSDGLGNIS-VPEPTTKKAEQTATEFLVDMVSQFPGE 545 V V G+A+PL + A +HG++GL IS +P+ KKA A + +S +P Sbjct: 74 VDVHAGAAKPLM-RESAFATHIHGTNGLAGISLLPDYPKKKATPDAVFAMYTTISNYPEP 132 Query: 546 VSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 725 V+++A GPLTN+AL + PS +++ + +GG+ GN T AE N+++DPEAA +V Sbjct: 133 VTLVATGPLTNIALLLATYPSVTDNIERFIFMGGS-TGIGNITSQAEFNVYADPEAARLV 191 Query: 726 FTSGADIA---VVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYG-D 893 + + I +V L++T +V + LR + L ++ + + + YG Sbjct: 192 LETKSLIGKLFMVPLDVTHKVLLDANIIQLLRQHSNPFSSTLVELMTVFQQTYENVYGIR 251 Query: 894 PAVFLHDPVSFAALVRPELFTFRKGVVRVETQGICRGHTSMDM 1022 V +HD + A + P L+T R V V + G T D+ Sbjct: 252 NGVPVHDVCAVALALWPSLWTSRSMYVTVSLDSLTLGRTVCDV 294
>Q31YW9:RIHB_SHIBS Putative pyrimidine-specific ribonucleoside hydrolase rihB - Shigella| boydii serotype 4 (strain Sb227) Length = 242 Score = 132 bits (333), Expect = 3e-30 Identities = 74/205 (36%), Positives = 119/205 (58%), Gaps = 2/205 (0%) Frame = +3 Query: 411 KPQVADFVHGSDGLGNISVPEPTTKKAEQT-ATEFLVDMVSQFPGEVSVLALGPLTNLAL 587 K VAD +HG GL V E T++AE T A ++++D + G+++++ +GPL+N+A+ Sbjct: 3 KQIVADNIHGETGLDG-PVFESLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAV 61 Query: 588 AMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTSGADIAVVGLNI 767 AM+M P+ + K+++IV++GGA+ GN TPSAE NI +DPEAA +VFTSG + ++GL++ Sbjct: 62 AMRMQPAILPKIREIVLMGGAY-GTGNFTPSAEFNIFADPEAARVVFTSGVPLVMIGLDL 120 Query: 768 TTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGDPAVFLHDPVSFAALVRPE 947 T Q T ++ + +GG + DI F +YG +HD L+ P+ Sbjct: 121 TNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPD 180 Query: 948 LFTFRKGVVRVE-TQGICRGHTSMD 1019 ++ V V+ G C G T D Sbjct: 181 GIKTQEMYVEVDVNSGPCYGRTVCD 205
>P32986:YBP2_ACIAM Uncharacterized protein in bps2 5'region - Acidianus ambivalens| (Desulfurolobus ambivalens) Length = 171 Score = 118 bits (296), Expect = 5e-26 Identities = 67/171 (39%), Positives = 104/171 (60%) Frame = +3 Query: 204 IIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVPVAE 383 IID+D DD++A ++A + ++LG+T + GN +NAL E DVPV Sbjct: 6 IIDSDTASDDTIAILLASKF--FKLLGITIVAGNVKFENEIKNALFTVEYFNL-DVPVFI 62 Query: 384 GSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSVLAL 563 GS+ P+ G K + VHG++G+G+ + EP ++ A + ++ + ++ GE+ +LA+ Sbjct: 63 GSSRPIMG-KWSTVEEVHGNNGIGDWKIEEPKISPEKEHAIDAIIRLSKEYEGELEILAV 121 Query: 564 GPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAA 716 PLTNLALA DP+ V ++KK+ ++GGA F+ GN TP AE N DPEAA Sbjct: 122 SPLTNLALAYLKDPTIVKRIKKVWIMGGA-FSRGNTTPIAEFNFWVDPEAA 171
>Q04179:URH1_YEAST Uridine nucleosidase - Saccharomyces cerevisiae (Baker's yeast)| Length = 340 Score = 106 bits (265), Expect = 2e-22 Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 16/260 (6%) Frame = +3 Query: 207 IDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPD-VPVAE 383 +D DPG DD++A ++ P +LG++T FGN NA L G+ +PV + Sbjct: 10 LDCDPGHDDAIAILLGCFHPAFNLLGISTCFGNAPPENTDYNARSLLTAMGKAQAIPVYK 69 Query: 384 GSAEPLKGGKPQVADFVHGSDGLGNISV-PEPTTK-KAEQTATEFLVDMVSQFPGEVSVL 557 G+ P K +P A +HG GL S+ P+PT + + ++T E + + + GE+S + Sbjct: 70 GAQRPWKR-EPHYAPDIHGISGLDGTSLLPKPTFEARTDKTYIEAIEEAILANNGEISFV 128 Query: 558 ALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATP--SAEANIHSDPEAADIVFT 731 + G LT LA + P VK I ++GG GN P SAE N+ DP+AA+ +F Sbjct: 129 STGALTTLATVFRCKPYLKKSVKYISIMGGGLHGLGNCNPNLSAEFNVWIDPDAANYIFR 188 Query: 732 SGADI----AVVGLNITTQ--VSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSYGD 893 D+ VV LN+T + ++ ++ + K + ++ +F++ H+Y D Sbjct: 189 D-PDVKDKCIVVPLNLTHKAIATYKVNEMIYNEKNNSKLRELFLELFQFFA----HTYKD 243 Query: 894 PAVF-----LHDPVSFAALV 938 F +HDPV+ L+ Sbjct: 244 MQGFESGPPIHDPVALMPLL 263
>Q45825:YRI3_CORAM Uncharacterized protein in ribF 3'region - Corynebacterium| ammoniagenes (Brevibacterium ammoniagenes) Length = 92 Score = 59.7 bits (143), Expect = 3e-08 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = +3 Query: 195 MKLIIDTDPGIDDSVATMMAFRAPGVEVLGLTTIFGNCTTAYATRNALILCEKAGRPDVP 374 MK+I+D D GIDD+ A A PG++++G+T +GN T N L G DVP Sbjct: 1 MKMILDLDTGIDDAFALAYAIAHPGIDLIGVTGTYGNVTIEQGMANTQALLTLLGAADVP 60 Query: 375 VAEGSAEPLKGGKPQVADF-VHGSDGLGNISV 467 V G A + G + A +HG +G+G + + Sbjct: 61 VYAGRA--IDGFEVSEASARIHGRNGVGEVDI 90
>Q8WXI7:MUC16_HUMAN Mucin-16 - Homo sapiens (Human)| Length = 22152 Score = 38.1 bits (87), Expect = 0.085 Identities = 75/300 (25%), Positives = 104/300 (34%), Gaps = 16/300 (5%) Frame = -1 Query: 1018 SMDVWPLQMPWVSTRTTPFLNVKSSGRTSAAKLTGSWR--NTAGSPYEWRCQSL*NLQMS 845 +MD WP TR+ F SS S + T S N+ GS MS Sbjct: 900 TMDTWP-------TRSAQF---SSSHLVSELRATSSTSVTNSTGSALPKISHLTGTATMS 949 Query: 844 QRNCACFPPELLSSDRSASVKLTW--------VVMLRPTTAISAPEVNTMSAASGSLWMF 689 Q N F +D +A TW + TT +S T +A+ + F Sbjct: 950 QTNRDTF------NDSAAPQSTTWPETSPRFKTGLPSATTTVSTSA--TSLSATVMVSKF 1001 Query: 688 ASAEGVAFPAAKKAPPSTTIFFTLVTK-EGSIFMANARLVRGPKASTETSPGNCDT---- 524 S + A PSTTI T T GS+ +A+ + G TE G DT Sbjct: 1002 TSPATSSMEATSIREPSTTILTTETTNGPGSMAVASTNIPIGKGYITE---GRLDTSHLP 1058 Query: 523 MSTRNSVAVCSAFLVVGSGTDMFPRPSDP*TKSATCGFPPLRGSALPSATGTSGRPAFSH 344 + T S F + M PS + A P R S S Sbjct: 1059 IGTTASSETSMDFTMAKESVSMSVSPSQ--SMDAAGSSTPGRTSQFVDTFSDDVYHLTSR 1116 Query: 343 RINALRVAYAVVQLPKMVVS-PRTSTPGARNAIMVATLSSMPGSVSMMSFIVSLFSAGRI 167 I R + P+M + P + PG+ + + LSS P S + + S FS R+ Sbjct: 1117 EITIPRDGTSSALTPQMTATHPPSPDPGSARSTWLGILSSSPSSPTPKVTMSSTFSTQRV 1176
>P87078:TOP2_CANAL DNA topoisomerase 2 - Candida albicans (Yeast)| Length = 1461 Score = 34.7 bits (78), Expect = 0.94 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +3 Query: 348 EKAGRPDVPVAEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTAT 506 E R P AE S + GK + D + + LGN PEP ++ +TA+ Sbjct: 1368 EAKSRSATPAAEKSKKSKSSGKQSILDELEDLEILGNFDKPEPKERRTRETAS 1420
>P22984:AMID_RHOER Amidase - Rhodococcus erythropolis| Length = 521 Score = 33.5 bits (75), Expect = 2.1 Identities = 40/168 (23%), Positives = 61/168 (36%) Frame = +3 Query: 384 GSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEFLVDMVSQFPGEVSVLAL 563 GSA + G DF G D G+I +P T LV FP E ++ L Sbjct: 174 GSAALVANGD---VDFAIGGDQGGSIRIPAAFCGVVGHKPTFGLVPYTGAFPIERTIDHL 230 Query: 564 GPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFTSGAD 743 GP+T + + V+ G S EA + +D+ G Sbjct: 231 GPITRTVHDAAL---------MLSVIAGRDGNDPRQADSVEAGDYLSTLDSDV---DGLR 278 Query: 744 IAVVGLNITTQVSFTEADLSELRSSGGKQAQFLCDICKFYSDWHLHSY 887 I +V VS E D +R++ + C + + WHLH++ Sbjct: 279 IGIVREGFGHAVSQPEVD-DAVRAAAHSLTEIGCTVEEVNIPWHLHAF 325
>Q6W4X9:MUC6_HUMAN Mucin-6 precursor - Homo sapiens (Human)| Length = 2392 Score = 32.7 bits (73), Expect = 3.6 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 10/171 (5%) Frame = -1 Query: 691 FASAEGVAFPAAKKA---PPSTTIFFTLVTKEGSIF-MANARLVRGPKASTETSPGNCDT 524 F EGV P PP+T T ++ ++ M G +ST SP + T Sbjct: 1185 FDHEEGVCVPCMPPTTPQPPTTPQLPTTGSRPTQVWPMTGTSTTIGLLSSTGPSPSSNHT 1244 Query: 523 MSTRNSVAVCSAFLVVGSGTDMF---PRPSDP*TKSATCGFPP---LRGSALPSATGTSG 362 ++ + A L T PRP+ T AT G PP LR +A + Sbjct: 1245 PASPTQTPLLPATLTSSKPTASSGEPPRPTTAVTPQATSGLPPTATLRSTATKPTVTQAT 1304 Query: 361 RPAFSHRINALRVAYAVVQLPKMVVSPRTSTPGARNAIMVATLSSMPGSVS 209 A + + + A + P +T G + +T +PG+ + Sbjct: 1305 TRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGTTA 1355
>Q0VF58:COJA1_MOUSE Collagen alpha-1(XIX) chain precursor - Mus musculus (Mouse)| Length = 1136 Score = 32.7 bits (73), Expect = 3.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 503 HGVSGRHGVAVPRGGLGARLGPSDQPRIGHEDGP 604 HG+ G+ GV +G G RLGP P + + GP Sbjct: 542 HGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGP 575
>Q8X613:ZRAR_ECO57 Transcriptional regulatory protein zraR - Escherichia coli O157:H7| Length = 441 Score = 32.3 bits (72), Expect = 4.7 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 9/117 (7%) Frame = +3 Query: 360 RPDVPV---------AEGSAEPLKGGKPQVADFVHGSDGLGNISVPEPTTKKAEQTATEF 512 R D+P+ AE + + +KG PQ D + D GNI ++ E Sbjct: 316 REDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNI-------RELENAVERA 368 Query: 513 LVDMVSQFPGEVSVLALGPLTNLALAMKMDPSFVTKVKKIVVLGGAFFAAGNATPSA 683 +V + ++ E + T + LA +D + +V+K V+L GN T +A Sbjct: 369 VVLLTGEYISERELPLAIASTPIPLAQSLDIQPLVEVEKEVILAALEKTGGNKTEAA 425
>O13302:IDH1_AJECA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial precursor -| Ajellomyces capsulata (Histoplasma capsulatum) Length = 388 Score = 32.3 bits (72), Expect = 4.7 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Frame = +3 Query: 906 LHDPV------SFAALVRPELFTFRKGVVRVETQGICRGHTSMDMGLKKFNSENAWSGYT 1067 LH PV SF +R EL + V+ G H ++D+ + + N+E +SG Sbjct: 120 LHTPVERSGHQSFNVALRQELDIYASIVLIKNIPGYKTRHDNVDLCIIRENTEGEYSGLE 179 Query: 1068 PISVAWTVDTAKVVALVK 1121 SV+ V++ K++ K Sbjct: 180 HQSVSGVVESLKIITRAK 197
>P31936:SIAL_PIG Bone sialoprotein-2 - Sus scrofa (Pig)| Length = 300 Score = 32.0 bits (71), Expect = 6.1 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +2 Query: 38 ERKEGRKKFQERREEKTESDRGTEALSTRAIDRAGIDGGQRASDPAGGEEGDDEA 202 E +E ++ +E E ++++GT ST + + +D G S GEEGD E+ Sbjct: 141 EDEEEEEENEENEAEVDDNEQGTNGTSTNSTE---VDSGNGHSGGDNGEEGDQES 192
>Q9BLY8:GBRB_DROSI Gamma-aminobutyric-acid receptor subunit beta precursor - Drosophila| simulans (Fruit fly) Length = 606 Score = 31.6 bits (70), Expect = 7.9 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 935 GPAGALHVQEGRGAGGDPGHLQRPHIHGHG 1024 GP G ++V G G G + GH H H HG Sbjct: 410 GPGGGVNVGVGMGMGPEHGHGHGHHAHSHG 439
>P25123:GBRB_DROME Gamma-aminobutyric-acid receptor subunit beta precursor - Drosophila| melanogaster (Fruit fly) Length = 606 Score = 31.6 bits (70), Expect = 7.9 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 935 GPAGALHVQEGRGAGGDPGHLQRPHIHGHG 1024 GP G ++V G G G + GH H H HG Sbjct: 410 GPGGGVNVGVGMGMGPEHGHGHGHHAHSHG 439 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 211,893,395 Number of extensions: 4469546 Number of successful extensions: 17271 Number of sequences better than 10.0: 43 Number of HSP's gapped: 17135 Number of HSP's successfully gapped: 43 Length of query: 450 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 333 Effective length of database: 68,593,924 Effective search space: 22841776692 Effective search space used: 22841776692 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
