ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf63j22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9N0W2:FUT8_BOVIN Alpha-(1,6)-fucosyltransferase - Bos taurus (B... 36 0.84
2Q9ULI3:HEG1_HUMAN Protein HEG homolog 1 precursor - Homo sapiens... 34 3.2
3Q8WXI7:MUC16_HUMAN Mucin-16 - Homo sapiens (Human) 33 4.1
4Q6EV77:FUT8_PANTR Alpha-(1,6)-fucosyltransferase - Pan troglodyt... 33 5.4
5Q9BYC5:FUT8_HUMAN Alpha-(1,6)-fucosyltransferase - Homo sapiens ... 33 5.4
6Q13283:G3BP1_HUMAN Ras GTPase-activating protein-binding protein... 33 7.1
7P34545:CBP1_CAEEL Protein cbp-1 - Caenorhabditis elegans 32 9.2

>Q9N0W2:FUT8_BOVIN Alpha-(1,6)-fucosyltransferase - Bos taurus (Bovine)|
          Length = 575
 Score = 35.8 bits (81), Expect = 0.84
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
 Frame = +3

Query: 957  PALKDDVWRLEKIGKDGAFHGKLNSNGIYTVEHFLQLLVKDQQ--KLRSILGTGMSNKMW 1130
            P +   V R +K+G + AFH  +    ++  EHF QLL +  Q  K R  L T       
Sbjct: 358  PVIGVHVRRTDKVGTEAAFH-PIEEYMVHVEEHF-QLLARRMQVDKKRVYLATDD----- 410

Query: 1131 ESLVEHAKTCVLSGKHYIYYSKDTASVGAIFNNIY---EFTGLIADDQFIS 1274
             SL++ AKT      HY + S ++ S  A  +N Y      G+I D  F+S
Sbjct: 411  PSLLKEAKT---KYPHYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLS 458



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>Q9ULI3:HEG1_HUMAN Protein HEG homolog 1 precursor - Homo sapiens (Human)|
          Length = 1381

 Score = 33.9 bits (76), Expect = 3.2
 Identities = 28/109 (25%), Positives = 48/109 (44%)
 Frame = +3

Query: 1407 TTRSDVANVSTSYTSYDSAHSQKQLARGHANIERSLMSSTSKADETRIASNGNQVAIYEA 1586
            ++ SD+   STSY    ++   +  +  HA  ERS +SS    D      +     ++ +
Sbjct: 575  SSSSDIVESSTSYIKISNSSHSEYSSFFHAQTERSNISS---YDGEYAQPSTESPVLHTS 631

Query: 1587 NPQDISPSITMQYGMSSLIPEGQFNGSSIQTQASRSSNMLAFGPPPQQP 1733
            N    +P+I M      L  + +F   S  + +S SS+  + GPP   P
Sbjct: 632  NLPSYTPTINMPNTSVVLDTDAEFVSDS-SSSSSSSSSSSSSGPPLPLP 679



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>Q8WXI7:MUC16_HUMAN Mucin-16 - Homo sapiens (Human)|
          Length = 22152

 Score = 33.5 bits (75), Expect = 4.1
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = +3

Query: 1404 VTTRSDVANVSTSYTSYDSAHSQKQLAR-GHANIERSLMSS-TSKADETR-IASNGNQVA 1574
            +TT  D  N    + S ++A S  ++   GH +   +L  S TSKA     I S      
Sbjct: 7165 LTTGKDTTNTEAVHPSTNTAASNVEIPSFGHESPSSALADSETSKATSPMFITSTQEDTT 7224

Query: 1575 IYEANPQDISPSITMQYGMSSLIPEGQFNGSSIQTQAS 1688
            +  + P  +  S   +  +SSL P+ +  GSS++T ++
Sbjct: 7225 VAISTPHFLETSRIQKESISSLSPKLRETGSSVETSSA 7262



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>Q6EV77:FUT8_PANTR Alpha-(1,6)-fucosyltransferase - Pan troglodytes (Chimpanzee)|
          Length = 575

 Score = 33.1 bits (74), Expect = 5.4
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
 Frame = +3

Query: 957  PALKDDVWRLEKIGKDGAFHGKLNSNGIYTVEHFLQLLVKDQQ--KLRSILGTGMSNKMW 1130
            P +   V R +K+G + AFH  +    ++  EHF QLL +  Q  K R  L T       
Sbjct: 358  PVIGVHVRRTDKVGTEAAFH-PIEEYMVHVEEHF-QLLARRMQVDKKRVYLATDD----- 410

Query: 1131 ESLVEHAKTCVLSGKHYIYYSKDTASVGAIFNNIY---EFTGLIADDQFIS 1274
             SL++ AKT      +Y + S ++ S  A  +N Y      G+I D  F+S
Sbjct: 411  PSLLKEAKT---KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLS 458



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>Q9BYC5:FUT8_HUMAN Alpha-(1,6)-fucosyltransferase - Homo sapiens (Human)|
          Length = 575

 Score = 33.1 bits (74), Expect = 5.4
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
 Frame = +3

Query: 957  PALKDDVWRLEKIGKDGAFHGKLNSNGIYTVEHFLQLLVKDQQ--KLRSILGTGMSNKMW 1130
            P +   V R +K+G + AFH  +    ++  EHF QLL +  Q  K R  L T       
Sbjct: 358  PVIGVHVRRTDKVGTEAAFH-PIEEYMVHVEEHF-QLLARRMQVDKKRVYLATDD----- 410

Query: 1131 ESLVEHAKTCVLSGKHYIYYSKDTASVGAIFNNIY---EFTGLIADDQFIS 1274
             SL++ AKT      +Y + S ++ S  A  +N Y      G+I D  F+S
Sbjct: 411  PSLLKEAKT---KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLS 458



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>Q13283:G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 - Homo sapiens|
           (Human)
          Length = 466

 Score = 32.7 bits (73), Expect = 7.1
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -3

Query: 213 PAWNQTAPCGAPASASPRRHNLAGAVGQILATSNWQTIAARGLEKARAAP 64
           P   +TAP  A  S+SP   ++A  V + L T +W ++ ++ L  + A P
Sbjct: 217 PVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVP 266



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>P34545:CBP1_CAEEL Protein cbp-1 - Caenorhabditis elegans|
          Length = 2056

 Score = 32.3 bits (72), Expect = 9.2
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
 Frame = +3

Query: 1617 MQYGMSSLIPEGQFNGSSIQTQASRSSNMLAFGPPPQQPH--NFEFSAFGLSMQSPAPNP 1790
            M  G S+L    Q      Q  A R     A G    QP   + +F++   SMQ   P  
Sbjct: 1910 MSMGSSNLQNLQQQQLQQQQAGAMRGGGGFAPGQNNSQPRAPSGQFASMNPSMQQQYPQQ 1969

Query: 1791 FDDWPGRLQENRGGVDDCL--MEEIRGRSHDMLENEEEMQH 1907
               WP + Q+N GG+        + + R + M+  +++  H
Sbjct: 1970 QQGWPQQRQQNPGGMQQNANPYNQFQNRQNMMMMPQQQQPH 2010


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 410,238,170
Number of extensions: 8993472
Number of successful extensions: 23167
Number of sequences better than 10.0: 7
Number of HSP's gapped: 23157
Number of HSP's successfully gapped: 7
Length of query: 792
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 671
Effective length of database: 67,496,744
Effective search space: 45290315224
Effective search space used: 45290315224
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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