ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61e14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os10g0569600:Os10g0569600 | 42 | 5e-04 | 2 | Y14825:Os10g0569400 | 39 | 0.005 | 3 | AK062449:Os10g0569400 | 39 | 0.005 | 4 | Os04g0115500:Os04g0115500 | 31 | 1.2 | 5 | AK106547:Os08g0101500 | 31 | 1.2 | 6 | AK103792:Os08g0101500 | 31 | 1.2 | 7 | AK119287:Os05g0555000 | 30 | 2.1 | 8 | Os03g0682600:Os03g0682600 | 30 | 2.8 | 9 | AK111154: | 30 | 2.8 | 10 | AK111211: | 29 | 4.7 | 11 | AK111553:Os02g0672200 | 29 | 4.7 | 12 | AK101978:Os06g0229800 | 29 | 4.7 | 13 | AF419099:Os06g0229800 | 29 | 4.7 | 14 | Os06g0578200:Os06g0578200 | 28 | 6.1 | 15 | Os05g0554300:Os05g0554300 | 28 | 6.1 | 16 | AK098985:Os10g0135600 | 28 | 6.1 | 17 | AK066939:Os10g0135600 | 28 | 6.1 | 18 | AK122098:Os04g0624600 | 28 | 8.0 |
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>Os10g0569600:Os10g0569600 | Length = 81 Score = 42.0 bits (97), Expect = 5e-04 Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +2 Query: 191 AVVGSGALNPSRPDFPSPRGASGGPYT--GRPCRTIYGCRDGPPA 319 A+ +GALNP P +P PR G PYT GR C YGC GPPA Sbjct: 37 AIGRNGALNP--PRYPVPR-IPGEPYTRPGRGCTVAYGCYGGPPA 78
>Y14825:Os10g0569400 | Length = 107 Score = 38.9 bits (89), Expect = 0.005 Identities = 25/60 (41%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Frame = +2 Query: 179 VCLGAVVGSGA-LNPSRPDFPSP----------RGASGGPYT--GRPCRTIYGCRDGPPA 319 V A+VG G LNP P P G G PYT GR C YGC GPPA Sbjct: 45 VAAAALVGGGVPLNPRYPAIPEEPYIGRRGDPYTGRGGEPYTRPGRGCTVAYGCYGGPPA 104
>AK062449:Os10g0569400 | Length = 107 Score = 38.9 bits (89), Expect = 0.005 Identities = 25/60 (41%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Frame = +2 Query: 179 VCLGAVVGSGA-LNPSRPDFPSP----------RGASGGPYT--GRPCRTIYGCRDGPPA 319 V A+VG G LNP P P G G PYT GR C YGC GPPA Sbjct: 45 VAAAALVGGGVPLNPRYPAIPEEPYIGRRGDPYTGRGGEPYTRPGRGCTVAYGCYGGPPA 104
>Os04g0115500:Os04g0115500 | Length = 480 Score = 30.8 bits (68), Expect = 1.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -3 Query: 257 RKHHAATGNQGG*G*EHQSLRRLQGRRSC 171 R H AAT + GG G H SLR L G C Sbjct: 194 RAHRAATSSSGGGGGHHASLRGLSGCYEC 222
>AK106547:Os08g0101500 | Length = 477 Score = 30.8 bits (68), Expect = 1.2 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 354 VHAHGCNQGLPPAGGPSRHP*IVRHGRPVYGPP 256 VH H G PA GP HP + RH + + PP Sbjct: 59 VHPHRAVAGAVPAAGPRHHPRLHRHLQRHHRPP 91
>AK103792:Os08g0101500 | Length = 475 Score = 30.8 bits (68), Expect = 1.2 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 354 VHAHGCNQGLPPAGGPSRHP*IVRHGRPVYGPP 256 VH H G PA GP HP + RH + + PP Sbjct: 57 VHPHRAVAGAVPAAGPRHHPRLHRHLQRHHRPP 89
>AK119287:Os05g0555000 | Length = 429 Score = 30.0 bits (66), Expect = 2.1 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 840 FFFFQKIDHPFTSISKHARIQLYSSLSSRYVQH 742 + F +++DHPFT +S+H +QL +LS R H Sbjct: 224 YIFNREMDHPFTVVSQHGVLQL-PTLSPRRAIH 255
>Os03g0682600:Os03g0682600 | Length = 894 Score = 29.6 bits (65), Expect = 2.8 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +2 Query: 200 GSGALNPSRPDFPSPRGASGGPYTGR 277 G GAL+ P P PRG GP GR Sbjct: 31 GRGALDAVEPRVPLPRGTGSGPGAGR 56
>AK111154: | Length = 961 Score = 29.6 bits (65), Expect = 2.8 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -2 Query: 381 AAISQLHMSVHAHGCNQGLPPAGGPSRHP*IVRH 280 A ++ + S+H H G PPAGG H I H Sbjct: 755 APVNDVGASMHGHAHQMGGPPAGGHGEHAAIAVH 788
>AK111211: | Length = 983 Score = 28.9 bits (63), Expect = 4.7 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 23/73 (31%) Frame = -2 Query: 363 HMSVHAHGCNQGLPPAGGPSRHP*IVRHGR-------------PV----------YGPPE 253 H + H HG + G+ PA P + +H R PV YGPP Sbjct: 78 HPAGHDHGLDHGMSPAHNTPMSP-MAQHDRARAASDASFDNRDPVCRLFDPATGSYGPPS 136 Query: 252 APRGDGKSGRLGL 214 APR KS + + Sbjct: 137 APRRQDKSAHVSM 149
>AK111553:Os02g0672200 | Length = 1082 Score = 28.9 bits (63), Expect = 4.7 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +2 Query: 200 GSGALNPSRPDFPSPRGASGGPYTGRPCRTIYGCRDGP----PAGG 325 G G P+ P + G GG + GR R Y R GP P GG Sbjct: 56 GGGGWQPANPQYAQQAGRGGGQHQGRGGR--YQGRGGPTSHQPGGG 99
>AK101978:Os06g0229800 | Length = 810 Score = 28.9 bits (63), Expect = 4.7 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -2 Query: 315 GGPSRHP*IVRHGRPV-YGPPEAPRGDGKSGRLGLRAPEP 199 GGP R GR V P A DG++GRL LRAP P Sbjct: 23 GGP-------RRGRVVGVAAPPALLYDGRAGRLALRAPPP 55
>AF419099:Os06g0229800 | Length = 810 Score = 28.9 bits (63), Expect = 4.7 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -2 Query: 315 GGPSRHP*IVRHGRPV-YGPPEAPRGDGKSGRLGLRAPEP 199 GGP R GR V P A DG++GRL LRAP P Sbjct: 23 GGP-------RRGRVVGVAAPPALLYDGRAGRLALRAPPP 55
>Os06g0578200:Os06g0578200 | Length = 153 Score = 28.5 bits (62), Expect = 6.1 Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 9/42 (21%) Frame = -2 Query: 282 HGR----PVYGPPEAPRGDGK-----SGRLGLRAPEPTTAPR 184 HGR P Y PP A GDG+ S RL L PT A R Sbjct: 64 HGRGSSLPPYRPPRAGAGDGRATPNLSRRLNLDGSSPTGAGR 105
>Os05g0554300:Os05g0554300 | Length = 119 Score = 28.5 bits (62), Expect = 6.1 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = +2 Query: 194 VVGSGALNPSRPDFPSPRGASGGPYTGRPCRTIYGCRDGPP 316 VVG+ NP P F PR GP +P Y C PP Sbjct: 15 VVGTRRRNPPYPGFCQPRNPRPGPSASQP---RYRCGGHPP 52
>AK098985:Os10g0135600 | Length = 453 Score = 28.5 bits (62), Expect = 6.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -2 Query: 258 PEAPRGDGKSGRLGLRAPEPT 196 P RG G +GR GLRAPE T Sbjct: 29 PRRRRGHGHNGRGGLRAPETT 49
>AK066939:Os10g0135600 | Length = 453 Score = 28.5 bits (62), Expect = 6.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -2 Query: 258 PEAPRGDGKSGRLGLRAPEPT 196 P RG G +GR GLRAPE T Sbjct: 29 PRRRRGHGHNGRGGLRAPETT 49
>AK122098:Os04g0624600 | Length = 1216 Score = 28.1 bits (61), Expect = 8.0 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 Query: 182 CLGAVVGSGALNPSRPDFPSPRGASGGPYTGRP 280 CL A NP R P P+GA+ Y RP Sbjct: 45 CLVASADYSKRNPRRASTPKPKGAASRTYAPRP 77 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,547,412 Number of extensions: 596457 Number of successful extensions: 1709 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1705 Number of HSP's successfully gapped: 18 Length of query: 281 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 182 Effective length of database: 11,435,796 Effective search space: 2081314872 Effective search space used: 2081314872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
