| Clone Name | FLbaf66e13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069656.1| Oryza sativa (japonica cultivar-group) Os09g0401300 (Os09g0401300) mRNA, complete cds Length = 1795 Score = 224 bits (113), Expect = 9e-55 Identities = 238/279 (85%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 691 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 750 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 571 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 630 Query: 751 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggtc 807 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 631 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggtt 690 Query: 808 gctgcttccaccgttggtgtgtacaaatcaagggacatgccgaagccaaagacagcgcaa 867 || | || || || ||||||||| | ||||||||||||||||| | ||| | |||||| Sbjct: 691 gccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaa 750 Query: 868 ttaaccatcttctacgctggttctgtcaatgtattcaacaacgtctcagcagaaaaggct 927 || |||||||| || ||||||||||| |||||||||||||||||||| | || |||||| Sbjct: 751 ttgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggct 810 Query: 928 caggaactcatgttcttagctagcagaggatctcttcca 966 ||||||||||||||||||||||||||||||||||||||| Sbjct: 811 caggaactcatgttcttagctagcagaggatctcttcca 849 Score = 137 bits (69), Expect = 2e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 1243 cctgtgacactagcctccaccactgctgcaagtattatgccaagagctgttcctcaagcc 1302 |||| |||||||||| | |||||||||||| ||||||||| |||||||| |||||||| Sbjct: 1123 cctgagacactagccactaccactgctgcagctattatgccgagagctgtccctcaagcg 1182 Query: 1303 cggaaggcgtcccttgcccgattcttggagaaaaggaaagaaagagtgacaactacggcg 1362 |||||||| ||||||||||||||||||||||| | || ||||||||||| || |||| Sbjct: 1183 cggaaggcatcccttgcccgattcttggagaagcgaaaggaaagagtgacgaccgtggcg 1242 Query: 1363 ccgtatccatcagccaagagcccgatggagagcagcgacac 1403 || || |||| |||||||||||| | |||||||||||||| Sbjct: 1243 ccatacccattggccaagagcccgctagagagcagcgacac 1283 Score = 83.8 bits (42), Expect = 2e-12 Identities = 134/157 (85%), Gaps = 12/157 (7%) Strand = Plus / Plus Query: 1762 taatgctggtctagctggtgcaacaccccacctaactaacaagagagctgtcgcttgcag 1821 ||||||||||||||||||||||| ||||| | ||||||||||||||||| | ||||||| Sbjct: 1597 taatgctggtctagctggtgcaa-acccccc--aactaacaagagagctgccacttgcag 1653 Query: 1822 actcttgattgttattttttgttttgcccctgcgcccattgtattgcagaaagaaacatg 1881 |||||||| ||||||||| ||| || |||| ||||||||||||||||||||| ||| Sbjct: 1654 actcttga---gtattttttg--ttggccttgcg-ccattgtattgcagaaagaaatatg 1707 Query: 1882 --ttaatttagcagta-tgaaattataggcttacaaa 1915 |||||||||||| |||||||||||||||||| Sbjct: 1708 ccaaaatttagcagtaccaaaattataggcttacaaa 1744 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1698 tattgatgatgctcttattcttgtttatgatgtgtttt 1735 |||||||| || |||| ||||||||||||||||||||| Sbjct: 1542 tattgatggtgttcttgttcttgtttatgatgtgtttt 1579 Score = 50.1 bits (25), Expect = 0.030 Identities = 67/81 (82%) Strand = Plus / Plus Query: 537 gcagcaggcctcgcgtgtcctcactccacagagatcgtttggcgctgagaaccatggcag 596 |||||||||||||| |||||| | ||||| ||||||||| || |||| ||| |||| Sbjct: 420 gcagcaggcctcgcacgtcctcgcaagacagaaatcgtttggtgccgagagccacggcat 479 Query: 597 cgtgcagtacgccgccgccgc 617 | |||||||||||||||||| Sbjct: 480 cccgcagtacgccgccgccgc 500 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 282 gatggagagggacttcctgggcgc 305 |||||||||||||||||||||||| Sbjct: 171 gatggagagggacttcctgggcgc 194
>dbj|AK065170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C19, full insert sequence Length = 1842 Score = 224 bits (113), Expect = 9e-55 Identities = 238/279 (85%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 691 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 750 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 573 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 632 Query: 751 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggtc 807 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 633 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggtt 692 Query: 808 gctgcttccaccgttggtgtgtacaaatcaagggacatgccgaagccaaagacagcgcaa 867 || | || || || ||||||||| | ||||||||||||||||| | ||| | |||||| Sbjct: 693 gccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaa 752 Query: 868 ttaaccatcttctacgctggttctgtcaatgtattcaacaacgtctcagcagaaaaggct 927 || |||||||| || ||||||||||| |||||||||||||||||||| | || |||||| Sbjct: 753 ttgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggct 812 Query: 928 caggaactcatgttcttagctagcagaggatctcttcca 966 ||||||||||||||||||||||||||||||||||||||| Sbjct: 813 caggaactcatgttcttagctagcagaggatctcttcca 851 Score = 137 bits (69), Expect = 2e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 1243 cctgtgacactagcctccaccactgctgcaagtattatgccaagagctgttcctcaagcc 1302 |||| |||||||||| | |||||||||||| ||||||||| |||||||| |||||||| Sbjct: 1125 cctgagacactagccactaccactgctgcagctattatgccgagagctgtccctcaagcg 1184 Query: 1303 cggaaggcgtcccttgcccgattcttggagaaaaggaaagaaagagtgacaactacggcg 1362 |||||||| ||||||||||||||||||||||| | || ||||||||||| || |||| Sbjct: 1185 cggaaggcatcccttgcccgattcttggagaagcgaaaggaaagagtgacgaccgtggcg 1244 Query: 1363 ccgtatccatcagccaagagcccgatggagagcagcgacac 1403 || || |||| |||||||||||| | |||||||||||||| Sbjct: 1245 ccatacccattggccaagagcccgctagagagcagcgacac 1285 Score = 83.8 bits (42), Expect = 2e-12 Identities = 134/157 (85%), Gaps = 12/157 (7%) Strand = Plus / Plus Query: 1762 taatgctggtctagctggtgcaacaccccacctaactaacaagagagctgtcgcttgcag 1821 ||||||||||||||||||||||| ||||| | ||||||||||||||||| | ||||||| Sbjct: 1599 taatgctggtctagctggtgcaa-acccccc--aactaacaagagagctgccacttgcag 1655 Query: 1822 actcttgattgttattttttgttttgcccctgcgcccattgtattgcagaaagaaacatg 1881 |||||||| ||||||||| ||| || |||| ||||||||||||||||||||| ||| Sbjct: 1656 actcttga---gtattttttg--ttggccttgcg-ccattgtattgcagaaagaaatatg 1709 Query: 1882 --ttaatttagcagta-tgaaattataggcttacaaa 1915 |||||||||||| |||||||||||||||||| Sbjct: 1710 ccaaaatttagcagtaccaaaattataggcttacaaa 1746 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1698 tattgatgatgctcttattcttgtttatgatgtgtttt 1735 |||||||| || |||| ||||||||||||||||||||| Sbjct: 1544 tattgatggtgttcttgttcttgtttatgatgtgtttt 1581 Score = 50.1 bits (25), Expect = 0.030 Identities = 67/81 (82%) Strand = Plus / Plus Query: 537 gcagcaggcctcgcgtgtcctcactccacagagatcgtttggcgctgagaaccatggcag 596 |||||||||||||| |||||| | ||||| ||||||||| || |||| ||| |||| Sbjct: 422 gcagcaggcctcgcacgtcctcgcaagacagaaatcgtttggtgccgagagccacggcat 481 Query: 597 cgtgcagtacgccgccgccgc 617 | |||||||||||||||||| Sbjct: 482 cccgcagtacgccgccgccgc 502 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 282 gatggagagggacttcctgggcgc 305 |||||||||||||||||||||||| Sbjct: 173 gatggagagggacttcctgggcgc 196
>dbj|AK071001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075J15, full insert sequence Length = 1443 Score = 216 bits (109), Expect = 2e-52 Identities = 237/279 (84%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 691 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 750 ||||| |||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 207 tcgccattcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 266 Query: 751 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggtc 807 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 267 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggtt 326 Query: 808 gctgcttccaccgttggtgtgtacaaatcaagggacatgccgaagccaaagacagcgcaa 867 || | || || || ||||||||| | ||||||||||||||||| | ||| | |||||| Sbjct: 327 gccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaa 386 Query: 868 ttaaccatcttctacgctggttctgtcaatgtattcaacaacgtctcagcagaaaaggct 927 || |||||||| || ||||||||||| |||||||||||||||||||| | || |||||| Sbjct: 387 ttgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggct 446 Query: 928 caggaactcatgttcttagctagcagaggatctcttcca 966 ||||||||||||||||||||||||||||||||||||||| Sbjct: 447 caggaactcatgttcttagctagcagaggatctcttcca 485 Score = 137 bits (69), Expect = 2e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 1243 cctgtgacactagcctccaccactgctgcaagtattatgccaagagctgttcctcaagcc 1302 |||| |||||||||| | |||||||||||| ||||||||| |||||||| |||||||| Sbjct: 759 cctgagacactagccactaccactgctgcagctattatgccgagagctgtccctcaagcg 818 Query: 1303 cggaaggcgtcccttgcccgattcttggagaaaaggaaagaaagagtgacaactacggcg 1362 |||||||| ||||||||||||||||||||||| | || ||||||||||| || |||| Sbjct: 819 cggaaggcatcccttgcccgattcttggagaagcgaaaggaaagagtgacgaccgtggcg 878 Query: 1363 ccgtatccatcagccaagagcccgatggagagcagcgacac 1403 || || |||| |||||||||||| | |||||||||||||| Sbjct: 879 ccatacccattggccaagagcccgctagagagcagcgacac 919 Score = 75.8 bits (38), Expect = 5e-10 Identities = 133/157 (84%), Gaps = 12/157 (7%) Strand = Plus / Plus Query: 1762 taatgctggtctagctggtgcaacaccccacctaactaacaagagagctgtcgcttgcag 1821 ||||||||||||||||||||||| |||| || |||||||||| |||||| | ||||||| Sbjct: 1233 taatgctggtctagctggtgcaa-accc--cccaactaacaagggagctgccacttgcag 1289 Query: 1822 actcttgattgttattttttgttttgcccctgcgcccattgtattgcagaaagaaacatg 1881 |||||||| ||||||||| ||| || |||| ||||||||||||||||||||| ||| Sbjct: 1290 actcttga---gtattttttg--ttggccttgcg-ccattgtattgcagaaagaaatatg 1343 Query: 1882 --ttaatttagcagta-tgaaattataggcttacaaa 1915 |||||||||||| |||||||||||||||||| Sbjct: 1344 ccaaaatttagcagtaccaaaattataggcttacaaa 1380 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1698 tattgatgatgctcttattcttgtttatgatgtgtttt 1735 |||||||| || |||| ||||||||||||||||||||| Sbjct: 1178 tattgatggtgttcttgttcttgtttatgatgtgtttt 1215
>gb|AY104838.1| Zea mays PCO139385 mRNA sequence Length = 627 Score = 95.6 bits (48), Expect = 6e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 1321 cgattcttggagaaaaggaaagaaagagtgacaactacggcgccgtatccatcagccaag 1380 ||||||||||||||||| || ||||| ||||||||| | || || || |||||||||||| Sbjct: 25 cgattcttggagaaaagaaaggaaagggtgacaactgctgcaccttacccatcagccaag 84 Query: 1381 agcccgatggagagcagcgacacg 1404 ||||||||||||||||| |||||| Sbjct: 85 agcccgatggagagcagtgacacg 108 Score = 81.8 bits (41), Expect = 9e-12 Identities = 100/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1438 tcatcatgcacagagatcgccttctcaagcaaccatgaggagtcgctgcgtctaggcggc 1497 |||||||||||||| || ||| |||||||||||||||||||||| || || || || Sbjct: 136 tcatcatgcacagacattgccctctcaagcaaccatgaggagtccctatgttta---ggg 192 Query: 1498 cggcccaggaacatcagctttagcggggagtccccgagtacaaaactacacatctgatc 1556 | |||||||||||||||||| | | |||||||| |||||||||||||| |||||||| Sbjct: 193 cagcccaggaacatcagcttcatccaagagtcccccagtacaaaactacagatctgatc 251 Score = 81.8 bits (41), Expect = 9e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 1787 ccccacctaactaacaagagagctgtcgcttgcagactcttgatt 1831 ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 433 ccccacctaactaacaagagagctgtcacttgcagactcttgatt 477
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 838 agggacatgccgaagccaaagacagcgcaattaaccatcttctacgctggttctgtcaat 897 ||||||||||||||| | ||| | |||||||| |||||||| || ||||||||||| ||| Sbjct: 14004215 agggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaat 14004156 Query: 898 gtattcaacaacgtctc 914 ||||||||||||||||| Sbjct: 14004155 gtattcaacaacgtctc 14004139 Score = 87.7 bits (44), Expect = 1e-13 Identities = 44/44 (100%) Strand = Plus / Minus Query: 923 aggctcaggaactcatgttcttagctagcagaggatctcttcca 966 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14004033 aggctcaggaactcatgttcttagctagcagaggatctcttcca 14003990 Score = 83.8 bits (42), Expect = 2e-12 Identities = 134/157 (85%), Gaps = 12/157 (7%) Strand = Plus / Minus Query: 1762 taatgctggtctagctggtgcaacaccccacctaactaacaagagagctgtcgcttgcag 1821 ||||||||||||||||||||||| ||||| | ||||||||||||||||| | ||||||| Sbjct: 14001677 taatgctggtctagctggtgcaa-acccccc--aactaacaagagagctgccacttgcag 14001621 Query: 1822 actcttgattgttattttttgttttgcccctgcgcccattgtattgcagaaagaaacatg 1881 |||||||| ||||||||| ||| || |||| ||||||||||||||||||||| ||| Sbjct: 14001620 actcttga---gtattttttg--ttggccttgcg-ccattgtattgcagaaagaaatatg 14001567 Query: 1882 --ttaatttagcagta-tgaaattataggcttacaaa 1915 |||||||||||| |||||||||||||||||| Sbjct: 14001566 ccaaaatttagcagtaccaaaattataggcttacaaa 14001530 Score = 81.8 bits (41), Expect = 9e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 691 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 750 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 14004471 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 14004412 Query: 751 g 751 | Sbjct: 14004411 g 14004411 Score = 71.9 bits (36), Expect = 8e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 1287 agctgttcctcaagcccggaaggcgtcccttgcccgattcttggagaa 1334 |||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 14003563 agctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaa 14003516 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1698 tattgatgatgctcttattcttgtttatgatgtgtttt 1735 |||||||| || |||| ||||||||||||||||||||| Sbjct: 14001732 tattgatggtgttcttgttcttgtttatgatgtgtttt 14001695 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 282 gatggagagggacttcctgggcgc 305 |||||||||||||||||||||||| Sbjct: 14005495 gatggagagggacttcctgggcgc 14005472 Score = 44.1 bits (22), Expect = 1.9 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1243 cctgtgacactagcctccaccactgctgcaagtattatgccaagag 1288 |||| |||||||||| | |||||||||||| ||||||||| |||| Sbjct: 14003716 cctgagacactagccactaccactgctgcagctattatgccgagag 14003671 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1375 gccaagagcccgatggagagcagcgacac 1403 |||||||||||| | |||||||||||||| Sbjct: 14002019 gccaagagcccgctagagagcagcgacac 14001991 Score = 42.1 bits (21), Expect = 7.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 565 cagagatcgtttggcgctgagaaccatggcagcgtgcagtacgccgccgccgc 617 |||| ||||||||| || |||| ||| |||| | |||||||||||||||||| Sbjct: 14004594 cagaaatcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgc 14004542 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 ggcgagctcgccttctccaag 537 ||||||||||||||||||||| Sbjct: 14052280 ggcgagctcgccttctccaag 14052260 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 cgccgccgaggacgacgccgc 383 ||||||||||||||||||||| Sbjct: 14862866 cgccgccgaggacgacgccgc 14862846
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 838 agggacatgccgaagccaaagacagcgcaattaaccatcttctacgctggttctgtcaat 897 ||||||||||||||| | ||| | |||||||| |||||||| || ||||||||||| ||| Sbjct: 106689 agggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaat 106630 Query: 898 gtattcaacaacgtctc 914 ||||||||||||||||| Sbjct: 106629 gtattcaacaacgtctc 106613 Score = 87.7 bits (44), Expect = 1e-13 Identities = 44/44 (100%) Strand = Plus / Minus Query: 923 aggctcaggaactcatgttcttagctagcagaggatctcttcca 966 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106507 aggctcaggaactcatgttcttagctagcagaggatctcttcca 106464 Score = 83.8 bits (42), Expect = 2e-12 Identities = 134/157 (85%), Gaps = 12/157 (7%) Strand = Plus / Minus Query: 1762 taatgctggtctagctggtgcaacaccccacctaactaacaagagagctgtcgcttgcag 1821 ||||||||||||||||||||||| ||||| | ||||||||||||||||| | ||||||| Sbjct: 104151 taatgctggtctagctggtgcaa-acccccc--aactaacaagagagctgccacttgcag 104095 Query: 1822 actcttgattgttattttttgttttgcccctgcgcccattgtattgcagaaagaaacatg 1881 |||||||| ||||||||| ||| || |||| ||||||||||||||||||||| ||| Sbjct: 104094 actcttga---gtattttttg--ttggccttgcg-ccattgtattgcagaaagaaatatg 104041 Query: 1882 --ttaatttagcagta-tgaaattataggcttacaaa 1915 |||||||||||| |||||||||||||||||| Sbjct: 104040 ccaaaatttagcagtaccaaaattataggcttacaaa 104004 Score = 81.8 bits (41), Expect = 9e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 691 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 750 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 106945 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 106886 Query: 751 g 751 | Sbjct: 106885 g 106885 Score = 71.9 bits (36), Expect = 8e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 1287 agctgttcctcaagcccggaaggcgtcccttgcccgattcttggagaa 1334 |||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 106037 agctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaa 105990 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1698 tattgatgatgctcttattcttgtttatgatgtgtttt 1735 |||||||| || |||| ||||||||||||||||||||| Sbjct: 104206 tattgatggtgttcttgttcttgtttatgatgtgtttt 104169 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 282 gatggagagggacttcctgggcgc 305 |||||||||||||||||||||||| Sbjct: 107969 gatggagagggacttcctgggcgc 107946 Score = 44.1 bits (22), Expect = 1.9 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1243 cctgtgacactagcctccaccactgctgcaagtattatgccaagag 1288 |||| |||||||||| | |||||||||||| ||||||||| |||| Sbjct: 106190 cctgagacactagccactaccactgctgcagctattatgccgagag 106145 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1375 gccaagagcccgatggagagcagcgacac 1403 |||||||||||| | |||||||||||||| Sbjct: 104493 gccaagagcccgctagagagcagcgacac 104465 Score = 42.1 bits (21), Expect = 7.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 565 cagagatcgtttggcgctgagaaccatggcagcgtgcagtacgccgccgccgc 617 |||| ||||||||| || |||| ||| |||| | |||||||||||||||||| Sbjct: 107068 cagaaatcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgc 107016
>dbj|AK059728.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D12, full insert sequence Length = 1098 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 838 agggacatgccgaagccaaagacagcgcaattaaccatcttctacgctggttctgtcaat 897 ||||||||||||||| | ||| | |||||||| |||||||| || ||||||||||| ||| Sbjct: 228 agggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaat 287 Query: 898 gtattcaacaacgtctc 914 ||||||||||||||||| Sbjct: 288 gtattcaacaacgtctc 304 Score = 87.7 bits (44), Expect = 1e-13 Identities = 44/44 (100%) Strand = Plus / Plus Query: 923 aggctcaggaactcatgttcttagctagcagaggatctcttcca 966 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aggctcaggaactcatgttcttagctagcagaggatctcttcca 453 Score = 71.9 bits (36), Expect = 8e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 1287 agctgttcctcaagcccggaaggcgtcccttgcccgattcttggagaa 1334 |||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 880 agctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaa 927 Score = 44.1 bits (22), Expect = 1.9 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1243 cctgtgacactagcctccaccactgctgcaagtattatgccaagag 1288 |||| |||||||||| | |||||||||||| ||||||||| |||| Sbjct: 727 cctgagacactagccactaccactgctgcagctattatgccgagag 772 Score = 42.1 bits (21), Expect = 7.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 770 cgttcaaacagccgcctttcgcgatgaacaatgcggt 806 ||||||| |||||||||||||| ||| ||||||||| Sbjct: 54 cgttcaagcagccgcctttcgccatgggcaatgcggt 90
>ref|NM_001068384.1| Oryza sativa (japonica cultivar-group) Os08g0428400 (Os08g0428400) mRNA, complete cds Length = 1868 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1279 atgccaagagctgttcctcaagcccggaaggcgtcccttgcccgattcttggagaa 1334 |||||||||||||| |||||||| || || || || || ||||||||||||||||| Sbjct: 1151 atgccaagagctgtgcctcaagctcgaaaagcatctctcgcccgattcttggagaa 1206
>dbj|AK103459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129L12, full insert sequence Length = 1868 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1279 atgccaagagctgttcctcaagcccggaaggcgtcccttgcccgattcttggagaa 1334 |||||||||||||| |||||||| || || || || || ||||||||||||||||| Sbjct: 1151 atgccaagagctgtgcctcaagctcgaaaagcatctctcgcccgattcttggagaa 1206
>dbj|AK060047.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H06, full insert sequence Length = 1086 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1279 atgccaagagctgttcctcaagcccggaaggcgtcccttgcccgattcttggagaa 1334 |||||||||||||| |||||||| || || || || || ||||||||||||||||| Sbjct: 162 atgccaagagctgtgcctcaagctcgaaaagcatctctcgcccgattcttggagaa 217
>gb|AC184059.2| Populus trichocarpa clone Pop1-103L21, complete sequence Length = 102003 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 99148 tcgtcgtcgtcatcatcatcatcgtt 99173
>ref|XM_977297.1| PREDICTED: Mus musculus RIKEN cDNA 4933428M09 gene (4933428M09Rik), mRNA Length = 1028 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 685 tcgtcgtcgtcatcatcatcatcgtt 660
>ref|XM_983156.1| PREDICTED: Mus musculus RIKEN cDNA 4933428M09 gene (4933428M09Rik), mRNA Length = 1028 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 685 tcgtcgtcgtcatcatcatcatcgtt 660
>ref|XM_978939.1| PREDICTED: Mus musculus RIKEN cDNA 4933428M09 gene (4933428M09Rik), mRNA Length = 1028 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 685 tcgtcgtcgtcatcatcatcatcgtt 660
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 189559 tcgtcgtcgtcatcatcatcatcgtt 189534
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 28914 tcgtcgtcgtcatcatcatcatcgtt 28889
>gb|AC098729.3| Mus musculus BAC clone RP23-3H23 from X, complete sequence Length = 213030 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 210399 tcgtcgtcgtcatcatcatcatcgtt 210374
>gb|BC049441.1| Danio rerio SRY-box containing gene 11b, mRNA (cDNA clone IMAGE:5612333), complete cds Length = 2719 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||||||| Sbjct: 675 ctcgtcgtcgtcatcatcatcatcgt 650
>dbj|AK016974.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933428M09 product:hypothetical Aspartic acid-rich region/Glutamic acid-rich region containing protein, full insert sequence Length = 1029 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 686 tcgtcgtcgtcatcatcatcatcgtt 661
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 18925543 tcgtcgtcgtcatcatcatcatcgtt 18925518 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 21911394 tcgtcgtcgtcatcatcatcatc 21911372 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 cgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||| Sbjct: 23324738 cgtcgtcgtcatcatcatcatc 23324717
>emb|BX248324.9| Zebrafish DNA sequence from clone DKEY-227H16 in linkage group 20, complete sequence Length = 209057 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||||||| Sbjct: 53150 ctcgtcgtcgtcatcatcatcatcgt 53125
>gb|U85091.1|DRU85091 Danio rerio transcriptional regulator Sox-11B (sox11B) mRNA, complete cds Length = 1748 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||||||| Sbjct: 654 ctcgtcgtcgtcatcatcatcatcgt 629
>emb|AL732419.6| Mouse DNA sequence from clone RP23-228A20 on chromosome X, complete sequence Length = 194380 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 134967 tcgtcgtcgtcatcatcatcatcgtt 134942
>emb|AL645640.14| Mouse DNA sequence from clone RP23-228G24 on chromosome 4, complete sequence Length = 91413 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||||| Sbjct: 43247 tcgtcgtcgtcatcatcatcatcgtt 43272
>ref|XM_842325.1| Trypanosoma brucei TREU927 eukaryotic translation initiation factor 1A, putative (Tb927_8.5880) mRNA, complete cds Length = 519 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 452 tcgtcgtcgtcatcatcatcatcgt 428
>ref|XM_001227186.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09260) mRNA, complete cds Length = 5868 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 2549 tcgtcgtcgtcatcatcatcatcgt 2525
>ref|XM_001214636.1| Aspergillus terreus NIH2624 predicted protein (ATEG_05458) mRNA, complete cds Length = 1173 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatcg 138 ||||||||||||||||||||||||| Sbjct: 894 ctcgtcgtcgtcatcatcatcatcg 870
>dbj|AB258488.1| Pleurochrysis haptonemofera cDNA, clone: SigC25 Length = 1393 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 96 tcgtcgtcgtcatcatcatcatcgt 72
>gb|AC130591.5| Rattus norvegicus BAC CH230-312A21 () complete sequence Length = 203784 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 147103 tcgtcgtcgtcatcatcatcatcgt 147127
>gb|AC168060.4| Mus musculus BAC clone RP23-305A9 from chromosome 8, complete sequence Length = 177422 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 15062 tcgtcgtcgtcatcatcatcatcgt 15086
>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence Length = 196086 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 80460 tcgtcgtcgtcatcatcatcatcgt 80484
>gb|AC113493.9| Mus musculus chromosome 15, clone RP23-359H23, complete sequence Length = 207687 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 197943 tcgtcgtcgtcatcatcatcatcgt 197967
>gb|AC002534.1| Arabidopsis thaliana BAC T32N15 from chromosome III near 54 cM, complete sequence Length = 101371 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1910 tcgtcgtcgtcatcatcatcatcgt 1934
>gb|AY301008.1| Pogonomyrmex occidentalis microsatellite Po07 sequence Length = 643 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 361 tcgtcgtcgtcatcatcatcatcgt 385 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 382 tcgtcgtcatcatcatcatcgt 403
>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence Length = 164873 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 138332 tcgtcgtcgtcatcatcatcatcgt 138356
>gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E13, complete sequence Length = 147087 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 115130 tcgtcgtcgtcatcatcatcatcgt 115106
>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence Length = 183993 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 122503 tcgtcgtcgtcatcatcatcatcgt 122479
>ref|XM_707787.1| Candida albicans SC5314 hypothetical protein (CaO19.12024), mRNA Length = 2136 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 2078 tcgtcgtcgtcatcatcatcatcgt 2054
>ref|XM_707881.1| Candida albicans SC5314 hypothetical protein (CaO19.4549), mRNA Length = 2136 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 2078 tcgtcgtcgtcatcatcatcatcgt 2054
>gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 map 17, complete sequence Length = 236275 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 144367 tcgtcgtcgtcatcatcatcatcgt 144343
>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence Length = 212472 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 19062 tcgtcgtcgtcatcatcatcatcgt 19038
>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence Length = 239758 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 178604 tcgtcgtcgtcatcatcatcatcgt 178580
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence Length = 186277 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 82325 tcgtcgtcgtcatcatcatcatcgt 82301
>ref|XM_818423.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 eukaryotic translation initiation factor 1A (Tb927.8.5880) partial mRNA Length = 519 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 452 tcgtcgtcgtcatcatcatcatcgt 428
>ref|XM_755763.1| Ustilago maydis 521 hypothetical protein (UM04709.1) partial mRNA Length = 5223 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 2672 tcgtcgtcgtcatcatcatcatcgt 2648
>ref|XM_755116.1| Ustilago maydis 521 hypothetical protein (UM04062.1) partial mRNA Length = 3417 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1349 tcgtcgtcgtcatcatcatcatcgt 1325
>ref|XM_753853.1| Ustilago maydis 521 hypothetical protein (UM02799.1) partial mRNA Length = 4149 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1169 tcgtcgtcgtcatcatcatcatcgt 1145
>emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in linkage group 2, complete sequence Length = 127371 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 97688 tcgtcgtcgtcatcatcatcatcgt 97664 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 97727 tcgtcgtcgtcatcatcatcatcgt 97703 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 98030 tcgtcgtcgtcatcatcatcatcgt 98006 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 97859 tcgtcgtcatcatcatcatcgt 97838 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 97967 tcgtcgtcatcatcatcatcgt 97946 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 98114 tcgtcgtcatcatcatcatcgt 98093 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 98147 tcgtcgtcatcatcatcatcgt 98126 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 97745 tcgtcgtcgtcatcatcatcgtcgt 97721 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 97916 tcgtcgtcgtcatcatcatcgtcgt 97892 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 98063 tcgtcgtcgtcatcatcatcgtcgt 98039
>ref|XM_802878.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509831.33) partial mRNA Length = 1659 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1637 tcgtcgtcgtcatcatcatcatcgt 1613
>emb|CR715565.2|CNS0GF2X Tetraodon nigroviridis full-length cDNA Length = 1401 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 518 tcgtcgtcgtcatcatcatcatcgt 494
>dbj|AB189967.1| Cyprinus carpio mRNA for aspartic acid-rich protein aspolin2-2, complete cds Length = 1732 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 743 tcgtcgtcgtcatcatcatcatcgt 719 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 863 tcgtcgtcgtcatcatcatcatc 841 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 761 tcgtcgtcatcatcatcatcgt 740 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||| ||||||||||||||||||| Sbjct: 536 tcgtcatcgtcatcatcatcatcgt 512 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 794 tcgtcgtcatcatcatcatcatcgt 770 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 887 tcgtcgtcgtcatcatcatcgtcgt 863 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||| ||||||||||||| Sbjct: 890 tcgtcgtcgtcgtcatcatcatcgt 866
>dbj|AB189966.1| Cyprinus carpio mRNA for aspartic acid-rich protein aspolin2-1, complete cds Length = 1212 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 750 tcgtcgtcgtcatcatcatcatcgt 726 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 534 tcgtcgtcgtcatcatcatcatc 512 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 663 tcgtcgtcgtcatcatcatcatc 641 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 783 tcgtcgtcgtcatcatcatcatc 761 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 843 tcgtcgtcgtcatcatcatcatc 821 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 804 tcgtcgtcatcatcatcatcgt 783 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 780 tcgtcgtcatcatcatcatcatcgt 756 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 840 tcgtcgtcatcatcatcatcatcgt 816 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 861 tcgtcgtcgtcatcatcatcgtcgt 837 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||| ||||||||||||| Sbjct: 864 tcgtcgtcgtcgtcatcatcatcgt 840
>emb|CR657711.2|CNS0F6GL Tetraodon nigroviridis full-length cDNA Length = 2092 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1445 tcgtcgtcgtcatcatcatcatcgt 1421 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 1367 tcgtcgtcgtcatcatcatcgtcgt 1343
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 30956816 tcgtcgtcgtcatcatcatcatcgt 30956792 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcgccgccgccgaggacgacg 379 ||||||||||||||||||||| Sbjct: 6747785 gcgccgccgccgaggacgacg 6747805
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatcg 138 ||||||||||||||||||||||||| Sbjct: 31720866 ctcgtcgtcgtcatcatcatcatcg 31720842 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 39885047 tcgtcgtcgtcatcatcatcatcg 39885070 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 360 cgccgccgccgaggacgacgccgcca 385 |||||||||||| ||||||||||||| Sbjct: 4215729 cgccgccgccgacgacgacgccgcca 4215704 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 17817770 tcgtcgtcatcatcatcatcgt 17817791 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||| ||||||||||||| Sbjct: 12907238 tcgtcgtcgtcgtcatcatcatcgt 12907262 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 12907241 tcgtcgtcgtcatcatcatcgtcgt 12907265
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 594387 tcgtcgtcgtcatcatcatcatcgt 594363 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 594366 tcgtcgtcatcatcatcatcgt 594345
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatcg 138 ||||||||||||||||||||||||| Sbjct: 134598 ctcgtcgtcgtcatcatcatcatcg 134574
>emb|X88900.1| C.tropicalis HAL3 gene Length = 2187 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1802 tcgtcgtcgtcatcatcatcatcgt 1778
>emb|X64324.1|RECALQ R.esculenta mRNA for calsequestrin Length = 2449 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1448 tcgtcgtcgtcatcatcatcatcgt 1424 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||| ||||||||||||||||||| Sbjct: 1415 tcgtcatcgtcatcatcatcatcgt 1391
>gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequence Length = 94001 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 46815 tcgtcgtcgtcatcatcatcatcgt 46791 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 66011 tcgtcgtcgtcatcatcatcatcg 66034
>emb|BX883046.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 5/11 Length = 349047 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 75203 tcgtcgtcgtcatcatcatcatcgt 75179
>emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in linkage group 2 Contains three novel genes, a novel gene similar to human CASQ1 (calsequestrin 1), six novel genes similar to vertebrate C1Q (gliacolin), a novel gene similar to human HNRPC (heterogeneous nuclear ribonucleoprotein C (C1/C2)), a novel gene for a protein similar to human H326 protein, two novel genes for proteins similar to human apolipoproteins, a novel gene similar to human TEP1 (telomerase-associated protein 1) and a CpG island, complete sequence Length = 143586 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 7981 tcgtcgtcgtcatcatcatcatcgt 8005 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 8449 tcgtcgtcgtcatcatcatcatcgt 8473 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 8038 tcgtcgtcgtcatcatcatcatc 8060 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 8398 tcgtcgtcatcatcatcatcgt 8419 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 7894 tcgtcgtcgtcatcatcatcgtcgt 7918 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 8017 tcgtcgtcatcatcatcatcatcgt 8041 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 8041 tcgtcgtcatcatcatcatcatcgt 8065 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 8092 tcgtcgtcgtcatcatcatcgtcgt 8116 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 8110 tcgtcgtcgtcatcatcatcgtcgt 8134 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||| ||||||||||||| Sbjct: 8194 tcgtcgtcgtcgtcatcatcatcgt 8218 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 8197 tcgtcgtcgtcatcatcatcgtcgt 8221 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 8245 tcgtcgtcatcatcatcatcatcgt 8269 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 8362 tcgtcgtcgtcatcatcatcgtcgt 8386 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 8380 tcgtcgtcgtcatcatcatcgtcgt 8404 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||| |||| Sbjct: 8416 tcgtcgtcgtcatcatcatcgtcgt 8440
>gb|AC134563.5| Mus musculus BAC clone RP24-179M18 from chromosome 19, complete sequence Length = 163878 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 156227 tcgtcgtcgtcatcatcatcatcgt 156203
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 11772 tcgtcgtcgtcatcatcatcatcgt 11748
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 140393 tcgtcgtcgtcatcatcatcatcgt 140369
>ref|NM_208035.1| Eremothecium gossypii AAR140Wp (AAR140W), mRNA Length = 1947 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 1862 tcgtcgtcgtcatcatcatcatcgt 1838 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 1841 tcgtcgtcatcatcatcatcgt 1820
>gb|AC102268.11| Mus musculus chromosome 18, clone RP24-248J13, complete sequence Length = 164012 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 85918 tcgtcgtcgtcatcatcatcatcgt 85894
>emb|AL731650.26| Mouse DNA sequence from clone RP23-368K3 on chromosome 8, complete sequence Length = 185422 Score = 50.1 bits (25), Expect = 0.030 Identities = 25/25 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||||| Sbjct: 74241 tcgtcgtcgtcatcatcatcatcgt 74217
>emb|CR855148.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525C06, complete sequence Length = 99490 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 360 cgccgccgccgaggacgacgccgc 383 |||||||||||||||||||||||| Sbjct: 48135 cgccgccgccgaggacgacgccgc 48112 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 gcgccgccgccgaggacgacgccgc 383 |||||||| |||||||||||||||| Sbjct: 36274 gcgccgccaccgaggacgacgccgc 36250
>ref|XM_001220907.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_01687) mRNA, complete cds Length = 2670 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 2387 tcgtcgtcgtcatcatcatcatcg 2364
>dbj|AK242644.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090025D19, full insert sequence Length = 2796 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 683 tcgtcgtcgtcatcatcatcatcg 660
>ref|NM_001059403.1| Oryza sativa (japonica cultivar-group) Os04g0439200 (Os04g0439200) mRNA, complete cds Length = 2415 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 360 cgccgccgccgaggacgacgccgc 383 |||||||||||||||||||||||| Sbjct: 2260 cgccgccgccgaggacgacgccgc 2237
>gb|BC121757.1| Danio rerio hypothetical protein LOC553507, mRNA (cDNA clone IMAGE:8158759), partial cds Length = 1550 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 528 tcgtcgtcgtcatcatcatcatcg 505
>ref|XR_009017.1| PREDICTED: Rattus norvegicus similar to novel protein (predicted) (RGD1563533_predicted), mRNA Length = 5773 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 5378 ctcgtcgtcgtcatcatcatcatc 5355
>ref|NM_112592.2| Arabidopsis thaliana unknown protein (AT3G17160) mRNA, complete cds Length = 1387 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 271 ctcgtcgtcgtcatcatcatcatc 248
>gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence Length = 789 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 577 tcgtcgtcgtcatcatcatcatcg 554
>ref|XM_656967.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4455.2), mRNA Length = 1350 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 1122 ctcgtcgtcgtcatcatcatcatc 1099
>gb|BT014866.1| Arabidopsis thaliana At3g17160 gene, complete cds Length = 498 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 216 ctcgtcgtcgtcatcatcatcatc 193
>gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome 7, complete sequence Length = 162814 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 117 gtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||| Sbjct: 121062 gtcgtcgtcatcatcatcatcgtt 121039
>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence Length = 161973 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 117 gtcgtcgtcatcatcatcatcgtt 140 |||||||||||||||||||||||| Sbjct: 57056 gtcgtcgtcatcatcatcatcgtt 57033
>gb|BC035954.1| Mus musculus cDNA sequence BC035954, mRNA (cDNA clone MGC:31683 IMAGE:4911231), complete cds Length = 2091 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 1217 ctcgtcgtcgtcatcatcatcatc 1194
>gb|DQ108629.1| Nodipecten subnodosus clone NsubA229 microsatellite sequence Length = 616 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 301 tcgtcgtcgtcatcatcatcatcg 278
>ref|XM_752272.1| Ustilago maydis 521 hypothetical protein (UM01218.1) partial mRNA Length = 3513 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 3243 ctcgtcgtcgtcatcatcatcatc 3220
>ref|NM_177569.2| Mus musculus cDNA sequence BC035954 (BC035954), mRNA dbj|AK052616.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630005H08 product:Hypothetical zinc finger, full insert sequence Length = 2143 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 1284 ctcgtcgtcgtcatcatcatcatc 1261
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 360 cgccgccgccgaggacgacgccgc 383 |||||||||||||||||||||||| Sbjct: 21864505 cgccgccgccgaggacgacgccgc 21864482 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1207061 tcgtcgtcgtcatcatcatcatc 1207083 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 34321060 tcgtcgtcgtcatcatcatcatc 34321082 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatca 135 ||||||||||||||||||||| Sbjct: 19745073 tcgtcgtcgtcatcatcatca 19745093 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 gcgccgccgccgaggacgacgccgc 383 |||||||| |||||||||||||||| Sbjct: 21855962 gcgccgccaccgaggacgacgccgc 21855938 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 cgtcgtcgtcatcatcatcat 136 ||||||||||||||||||||| Sbjct: 22091596 cgtcgtcgtcatcatcatcat 22091576
>dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-284M8, complete sequence Length = 255195 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 163734 ctcgtcgtcgtcatcatcatcatc 163757
>gb|AC156450.2| Volvox carteri clone JGIAOBO-41M18, complete sequence Length = 36468 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 9331 ctcgtcgtcgtcatcatcatcatc 9308
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 65755 tcgtcgtcgtcatcatcatcatcg 65778
>gb|AF107563.1|MUSPEX1 Mus musculus Cast (Cast) and peroxisomal membrane anchor protein (Pex14) genes, partial sequence Length = 53094 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 31184 ctcgtcgtcgtcatcatcatcatc 31161
>gb|BT004082.1| Arabidopsis thaliana clone RAFL15-06-A06 (R20795) unknown protein (At3g17160) mRNA, complete cds Length = 787 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 271 ctcgtcgtcgtcatcatcatcatc 248
>dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14A17 Length = 92620 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 84222 ctcgtcgtcgtcatcatcatcatc 84199
>ref|XM_955111.1| Neurospora crassa OR74A hypothetical protein (NCU05643.1) partial mRNA Length = 1527 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 474 ctcgtcgtcgtcatcatcatcatc 451
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 360 cgccgccgccgaggacgacgccgc 383 |||||||||||||||||||||||| Sbjct: 49106 cgccgccgccgaggacgacgccgc 49083 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 gcgccgccgccgaggacgacgccgc 383 |||||||| |||||||||||||||| Sbjct: 40563 gcgccgccaccgaggacgacgccgc 40539
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 360 cgccgccgccgaggacgacgccgc 383 |||||||||||||||||||||||| Sbjct: 69996 cgccgccgccgaggacgacgccgc 70019
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcg 138 |||||||||||||||||||||||| Sbjct: 55148 tcgtcgtcgtcatcatcatcatcg 55171
>emb|AL611967.21| Mouse DNA sequence from clone RP23-121D17 on chromosome 4, complete sequence Length = 173824 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 ctcgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||||| Sbjct: 4196 ctcgtcgtcgtcatcatcatcatc 4173
>ref|XM_001007829.1| Tetrahymena thermophila SB210 Neurohypophysial hormones, N-terminal Domain containing protein (TTHERM_00070910) mRNA, complete cds Length = 5313 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 4019 tcgtcgtcgtcatcatcatcatc 3997
>gb|EF059247.1| Synthetic construct Saccharomyces cerevisiae clone FLH143313.01X RAD6, complete sequence Length = 519 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 500 tcgtcgtcgtcatcatcatcatc 478
>ref|XM_841900.1| Trypanosoma brucei TREU927 ubiquitin-protein ligase, putative (Tb927_8.1590) mRNA, complete cds Length = 12915 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 7955 tcgtcgtcgtcatcatcatcatc 7933
>emb|CR848685.7| Zebrafish DNA sequence from clone CH211-246D10 in linkage group 16, complete sequence Length = 149329 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 38972 tcgtcgtcgtcatcatcatcatc 38994
>gb|AC188687.4| Pan troglodytes BAC clone CH251-721E1 from chromosome 7, complete sequence Length = 187603 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 76384 tcgtcgtcgtcatcatcatcatc 76362
>gb|DQ517337.1| Trichoplusia ni ascovirus 2c, complete genome Length = 174059 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 112940 tcgtcgtcgtcatcatcatcatc 112962
>ref|NM_001062602.1| Oryza sativa (japonica cultivar-group) Os05g0519800 (Os05g0519800) mRNA, complete cds Length = 1218 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 746 tcgtcgtcgtcatcatcatcatc 724
>ref|XM_524200.2| PREDICTED: Pan troglodytes similar to RPB5-mediating protein isoform a (LOC468813), mRNA Length = 1561 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 235 tcgtcgtcgtcatcatcatcatc 213
>gb|AC106950.8| Rattus norvegicus BAC CH230-23G8 () complete sequence Length = 254317 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 149950 tcgtcgtcgtcatcatcatcatc 149928
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 15382747 tcgtcgtcgtcatcatcatcatc 15382769 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 636 gcagcctccacagcagcagca 656 ||||||||||||||||||||| Sbjct: 1381846 gcagcctccacagcagcagca 1381826 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||||||||| |||||||||| Sbjct: 2802400 tcgtcgtcgtcatcgtcatcatcgt 2802424 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 ctcgtcgtcgtcatcatcatcatcg 138 |||||| |||||||||||||||||| Sbjct: 4696341 ctcgtcctcgtcatcatcatcatcg 4696365
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 16430505 tcgtcgtcgtcatcatcatcatc 16430527 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcat 136 |||||||||||||||||||||| Sbjct: 8449025 tcgtcgtcgtcatcatcatcat 8449004 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cgtcgtcgtcatcatcatcatc 137 |||||||||||||||||||||| Sbjct: 10358064 cgtcgtcgtcatcatcatcatc 10358085 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||| Sbjct: 2638113 gtcgtcgtcatcatcatcatc 2638093
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 7515524 tcgtcgtcgtcatcatcatcatc 7515546 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 18498243 tcgtcgtcgtcatcatcatcatc 18498265 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 ||||||||||| |||||||||||||| Sbjct: 7519376 tcgtcgtcgtcgtcatcatcatcgtt 7519401 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 ||||| |||||||||||||||||||| Sbjct: 15617470 tcgtcctcgtcatcatcatcatcgtt 15617445 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 ctcgtcgtcgtcatcatcatcatcgt 139 ||||||||| |||||||||||||||| Sbjct: 18476073 ctcgtcgtcatcatcatcatcatcgt 18476098
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 16627964 tcgtcgtcgtcatcatcatcatc 16627942 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 24527340 tcgtcgtcgtcatcatcatcatc 24527318 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 2489818 tcgtcgtcatcatcatcatcgt 2489797 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ctcgtcgtcgtcatcatcatc 134 ||||||||||||||||||||| Sbjct: 2192137 ctcgtcgtcgtcatcatcatc 2192157 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcg 138 ||||||||||||||||||||| Sbjct: 9601417 tcgtcgtcatcatcatcatcg 9601397
>gb|BT028631.1| Gasterosteus aculeatus clone CNB265-E08 mRNA sequence Length = 1489 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 466 tcgtcgtcgtcatcatcatcatc 444
>emb|CT010485.17| Mouse DNA sequence from clone CH29-161F5 on chromosome 17, complete sequence Length = 258652 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 107613 tcgtcgtcgtcatcatcatcatc 107635
>gb|AC127267.4| Mus musculus BAC clone RP23-401H14 from chromosome 6, complete sequence Length = 186704 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 70133 tcgtcgtcgtcatcatcatcatc 70111
>gb|AC183810.9| Glycine max clone gmp1-95h18, complete sequence Length = 85349 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 64822 tcgtcgtcgtcatcatcatcatc 64844
>dbj|AK226173.1| Homo sapiens mRNA for RPB5-mediating protein isoform a variant, clone: bm03840 Length = 2555 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1223 tcgtcgtcgtcatcatcatcatc 1201
>ref|XM_001062735.1| PREDICTED: Rattus norvegicus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 (predicted) (Elovl4_predicted), mRNA Length = 3037 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1792 tcgtcgtcgtcatcatcatcatc 1770
>ref|XM_236476.4| PREDICTED: Rattus norvegicus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 (predicted) (Elovl4_predicted), mRNA Length = 3037 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1792 tcgtcgtcgtcatcatcatcatc 1770
>ref|XM_234842.4| PREDICTED: Rattus norvegicus similar to KIAA1111-like protein (predicted) (RGD1310212_predicted), mRNA Length = 2784 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 2480 tcgtcgtcgtcatcatcatcatc 2458
>emb|CT986794.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 644 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 209 tcgtcgtcgtcatcatcatcatc 187
>emb|CT986127.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 609 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 209 tcgtcgtcgtcatcatcatcatc 187
>emb|CT986098.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 644 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 209 tcgtcgtcgtcatcatcatcatc 187
>emb|CT983913.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 609 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 209 tcgtcgtcgtcatcatcatcatc 187
>emb|CT982768.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 609 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 209 tcgtcgtcgtcatcatcatcatc 187
>emb|CT980360.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 645 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 209 tcgtcgtcgtcatcatcatcatc 187
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 99758 tcgtcgtcgtcatcatcatcatc 99736
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 92380 tcgtcgtcgtcatcatcatcatc 92402
>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence Length = 131485 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 50917 tcgtcgtcgtcatcatcatcatc 50939
>ref|XM_362767.1| Magnaporthe grisea 70-15 hypothetical protein (MG08281.4) partial mRNA Length = 6381 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1237 tcgtcgtcgtcatcatcatcatc 1259
>ref|NM_118499.2| Arabidopsis thaliana unknown protein (AT4G23680) mRNA, complete cds Length = 745 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 531 tcgtcgtcgtcatcatcatcatc 553
>ref|XM_636494.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0205972) mRNA, complete cds Length = 4134 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 2951 tcgtcgtcgtcatcatcatcatc 2929
>gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome 3, complete sequence Length = 203513 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 45109 tcgtcgtcgtcatcatcatcatc 45087
>gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosome 10, complete sequence Length = 210846 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 43803 tcgtcgtcgtcatcatcatcatc 43781
>gb|AC154520.3| Mus musculus BAC clone RP23-471P16 from chromosome 14, complete sequence Length = 199186 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 96047 tcgtcgtcgtcatcatcatcatc 96069
>gb|AC162799.4| Mus musculus BAC clone RP24-392E13 from chromosome 3, complete sequence Length = 177586 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 82694 tcgtcgtcgtcatcatcatcatc 82716
>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence Length = 186607 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 86512 tcgtcgtcgtcatcatcatcatc 86490
>gb|AF545813.1| Zea mays SET domain protein 113 (sdg113) mRNA, complete cds Length = 2428 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 606 tcgtcgtcgtcatcatcatcatc 584
>gb|AC161202.15| Mus musculus chromosome 8, clone RP23-479K12, complete sequence Length = 175459 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 100692 tcgtcgtcgtcatcatcatcatc 100714 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatca 135 ||||||||||||||||||||| Sbjct: 100856 tcgtcgtcgtcatcatcatca 100836
>ref|NM_001031594.1| Gallus gallus DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C), mRNA gb|AY376898.1| Gallus gallus artemis (SNM1C) mRNA, complete cds Length = 3160 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1385 tcgtcgtcgtcatcatcatcatc 1363 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgtt 140 |||||||| ||||||||||||||||| Sbjct: 1382 tcgtcgtcatcatcatcatcatcgtt 1357
>gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, complete sequence Length = 205369 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 163632 tcgtcgtcgtcatcatcatcatc 163610
>gb|AC152456.1| Pan troglodytes chromosome X clone PTB-055J03 map human ortholog q25, complete sequence Length = 142891 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 41570 tcgtcgtcgtcatcatcatcatc 41548
>ref|NM_003796.2| Homo sapiens chromosome 19 open reading frame 2 (C19orf2), transcript variant 1, mRNA Length = 2295 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 959 tcgtcgtcgtcatcatcatcatc 937
>ref|NM_134447.1| Homo sapiens chromosome 19 open reading frame 2 (C19orf2), transcript variant 2, mRNA Length = 2260 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 924 tcgtcgtcgtcatcatcatcatc 902
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 211209 tcgtcgtcgtcatcatcatcatc 211187
>gb|AF023249.1| Fraxinus excelsior microsatellite ATG4 repeat region Length = 189 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 150 tcgtcgtcgtcatcatcatcatc 172
>gb|AF441496.1| Pinus taeda clone 18c18f microsatellite PtTX2151 sequence Length = 287 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 246 tcgtcgtcgtcatcatcatcatc 224
>gb|AF441491.1| Pinus taeda clone 6j11f microsatellite PtTX2081 sequence Length = 344 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 251 tcgtcgtcgtcatcatcatcatc 273
>gb|AF441502.1| Pinus taeda clone 57n9f microsatellite PtTX3007 sequence Length = 489 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 215 tcgtcgtcgtcatcatcatcatc 193
>gb|AF277843.1| Pinus taeda clone 62b1f microsatellite PtTX3088 sequence Length = 524 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 347 tcgtcgtcgtcatcatcatcatc 369
>gb|AF172408.1| Pinus taeda clone LC15i12 microsatellite sequence Length = 508 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 432 tcgtcgtcgtcatcatcatcatc 410 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||| ||||||||||||||||||| Sbjct: 468 tcgtcatcgtcatcatcatcatcgt 444
>gb|AF441535.1| Pinus taeda PtTX3123 microsatellite sequence Length = 471 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 200 tcgtcgtcgtcatcatcatcatc 178
>gb|AC099045.21| Trypanosoma brucei chromosome 8 clone RPCI93-29O9, complete sequence Length = 140978 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 95126 tcgtcgtcgtcatcatcatcatc 95104
>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence Length = 223764 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 208023 tcgtcgtcgtcatcatcatcatc 208001
>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 225524 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 59867 tcgtcgtcgtcatcatcatcatc 59845
>gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome 8, complete sequence Length = 252334 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 178893 tcgtcgtcgtcatcatcatcatc 178915
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 125832 tcgtcgtcgtcatcatcatcatc 125810
>gb|AC148097.7| Medicago truncatula clone mth2-15a20, complete sequence Length = 125098 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 21035 tcgtcgtcgtcatcatcatcatc 21057
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 63472 tcgtcgtcgtcatcatcatcatc 63450
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence Length = 210979 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 113506 tcgtcgtcgtcatcatcatcatc 113484 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatca 135 ||||||||||||||||||||| Sbjct: 149789 tcgtcgtcgtcatcatcatca 149809
>gb|AC131059.6| Mus musculus chromosome 1, clone RP24-108K12, complete sequence Length = 189961 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 105926 tcgtcgtcgtcatcatcatcatc 105948
>gb|BC080039.1| Xenopus laevis similar to calsequestrin 2 (cardiac muscle), mRNA (cDNA clone IMAGE:5571738), partial cds Length = 1615 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1165 tcgtcgtcgtcatcatcatcatc 1143
>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence Length = 198590 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 146556 tcgtcgtcgtcatcatcatcatc 146578
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 162554 tcgtcgtcgtcatcatcatcatc 162532
>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 204000 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 12744 tcgtcgtcgtcatcatcatcatc 12766
>gb|AC127189.4| Rattus norvegicus 1 BAC CH230-266M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 222423 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 213220 tcgtcgtcgtcatcatcatcatc 213242
>gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's Hospital Oakland Research Institute) complete sequence Length = 138366 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 29310 tcgtcgtcgtcatcatcatcatc 29332
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 57270 tcgtcgtcgtcatcatcatcatc 57248
>gb|AC092229.2| Drosophila melanogaster clone BACR23I04, complete sequence Length = 202042 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 47938 tcgtcgtcgtcatcatcatcatc 47960
>gb|BC070561.1| Xenopus laevis hypothetical protein MGC80010, mRNA (cDNA clone MGC:80010 IMAGE:3397323), complete cds Length = 3975 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 3047 tcgtcgtcgtcatcatcatcatc 3025
>gb|AC145740.4| Mus musculus BAC clone RP24-233K8 from chromosome 12, complete sequence Length = 178285 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 76154 tcgtcgtcgtcatcatcatcatc 76132 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||| Sbjct: 171865 gtcgtcgtcatcatcatcatc 171845
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 21794 tcgtcgtcgtcatcatcatcatc 21772
>gb|AC134735.3| Rattus norvegicus 20 BAC CH230-1P16 (Children's Hospital Oakland Research Institute) complete sequence Length = 49899 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 10499 tcgtcgtcgtcatcatcatcatc 10477
>ref|XM_656706.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4194.2), mRNA Length = 3552 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 2372 tcgtcgtcgtcatcatcatcatc 2350
>ref|XM_653952.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1440.2), mRNA Length = 5619 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 836 tcgtcgtcgtcatcatcatcatc 814
>gb|AC087067.3| Rattus norvegicus strain Brown Norway clone RP31-40H10, complete sequence Length = 178746 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 55707 tcgtcgtcgtcatcatcatcatc 55685
>gb|BC070932.1| Rattus norvegicus cDNA clone IMAGE:7097643, partial cds Length = 2455 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 661 tcgtcgtcgtcatcatcatcatc 639
>gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, complete sequence Length = 242338 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 197538 tcgtcgtcgtcatcatcatcatc 197516
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 122237 tcgtcgtcgtcatcatcatcatc 122215
>gb|AC127417.3| Mus musculus BAC clone RP23-459M2 from chromosome 10, complete sequence Length = 192814 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 gtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||||||||| Sbjct: 106979 gtcgtcgtcatcatcatcatcgt 107001
>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete sequence Length = 178936 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 160299 tcgtcgtcgtcatcatcatcatc 160277
>gb|AC132570.3| Mus musculus BAC clone RP24-531D1 from chromosome 5, complete sequence Length = 183005 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 8766 tcgtcgtcgtcatcatcatcatc 8788 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 8793 tcgtcgtcgtcatcatcatcatc 8815
>gb|AC163608.2| Mus musculus chromosome 1, clone RP24-185M14, complete sequence Length = 161555 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 37332 tcgtcgtcgtcatcatcatcatc 37310
>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208555 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 92460 tcgtcgtcgtcatcatcatcatc 92438
>gb|AC114573.11| Mus musculus chromosome 13, clone RP23-146M15, complete sequence Length = 200859 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 32824 tcgtcgtcgtcatcatcatcatc 32802 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||| Sbjct: 180914 gtcgtcgtcatcatcatcatc 180894
>gb|AC110521.14| Mus musculus chromosome 12, clone RP23-50H15, complete sequence Length = 189474 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 87848 tcgtcgtcgtcatcatcatcatc 87826
>gb|AC164559.3| Mus musculus BAC clone RP23-198H17 from chromosome 6, complete sequence Length = 194636 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 118839 tcgtcgtcgtcatcatcatcatc 118817
>gb|AC115037.16| Mus musculus chromosome 12, clone RP24-276C17, complete sequence Length = 214848 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 32231 tcgtcgtcgtcatcatcatcatc 32253
>ref|XM_538106.2| PREDICTED: Canis familiaris similar to TATA box binding protein-associated factor, RNA polymerase II, Q (LOC480985), mRNA Length = 1485 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1025 tcgtcgtcgtcatcatcatcatc 1003
>gb|AY392151.1| Schistosoma haematobium nicotinic acetylcholine receptor non-alpha subunit precursor, mRNA, complete cds Length = 2328 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1863 tcgtcgtcgtcatcatcatcatc 1885
>gb|AY539932.1| Rattus norvegicus LRRGT00181 mRNA, complete cds Length = 150 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 101 tcgtcgtcgtcatcatcatcatc 123
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 71794 tcgtcgtcgtcatcatcatcatc 71816
>gb|AC140240.2| Mus musculus BAC clone RP24-281M12 from chromosome 18, complete sequence Length = 166476 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 20995 tcgtcgtcgtcatcatcatcatc 20973
>gb|AY166313.1| Lithospermum multiflorum clone 21.29B TCP gene, partial sequence Length = 400 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY166312.1| Lithospermum multiflorum clone 21.90B TCP gene, partial sequence Length = 400 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY166311.1| Lithospermum multiflorum clone 21.14A TCP gene, partial sequence Length = 400 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY166310.1| Lithospermum multiflorum clone 21.86B TCP gene, partial sequence Length = 400 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY166309.1| Lithospermum multiflorum clone 21.81A TCP gene, partial sequence Length = 403 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY166308.1| Lithospermum multiflorum clone 21.22B TCP gene, partial sequence Length = 403 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY168181.1| Lithospermum multiflorum LmTCP4 TCP protein (TCP) gene, partial cds Length = 400 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|AY168180.1| Lithospermum multiflorum LmTCP3 TCP protein (TCP) gene, partial cds Length = 403 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 252 tcgtcgtcgtcatcatcatcatc 230
>gb|BC041283.1| Xenopus laevis similar to calsequestrin 2 (cardiac muscle), mRNA (cDNA clone IMAGE:4681496), partial cds Length = 1663 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1214 tcgtcgtcgtcatcatcatcatc 1192
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 186739 tcgtcgtcgtcatcatcatcatc 186717
>gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, complete sequence Length = 224534 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 26537 tcgtcgtcgtcatcatcatcatc 26515
>gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Hospital Oakland Research Institute) complete sequence Length = 232501 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 172696 tcgtcgtcgtcatcatcatcatc 172718
>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence Length = 182582 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 55319 tcgtcgtcgtcatcatcatcatc 55297
>gb|AC140210.2| Mus musculus BAC clone RP24-472L9 from chromosome 13, complete sequence Length = 147418 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 105626 tcgtcgtcgtcatcatcatcatc 105604
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 92244 tcgtcgtcgtcatcatcatcatc 92266
>gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosome 17, complete sequence Length = 213609 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 37318 tcgtcgtcgtcatcatcatcatc 37340
>gb|AC124450.3| Mus musculus BAC clone RP24-215C4 from chromosome 13, complete sequence Length = 157531 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 153380 tcgtcgtcgtcatcatcatcatc 153358
>gb|DQ378290.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 10J19, complete sequence Length = 34783 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 27761 tcgtcgtcgtcatcatcatcatc 27739
>gb|AC125138.4| Mus musculus BAC clone RP24-324N8 from chromosome 5, complete sequence Length = 171978 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 54972 tcgtcgtcgtcatcatcatcatc 54950 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 54999 tcgtcgtcgtcatcatcatcatc 54977
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence Length = 150375 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 86876 tcgtcgtcgtcatcatcatcatc 86898 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 86879 tcgtcgtcatcatcatcatcatcgt 86903
>gb|AC127421.3| Mus musculus BAC clone RP24-314F1 from chromosome 18, complete sequence Length = 170221 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 60211 tcgtcgtcgtcatcatcatcatc 60233
>gb|AC121896.3| Mus musculus BAC clone RP24-159J17 from chromosome 8, complete sequence Length = 146143 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 88008 tcgtcgtcgtcatcatcatcatc 87986
>gb|AC127229.3| Mus musculus BAC clone RP24-553F13 from chromosome 18, complete sequence Length = 166995 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 38478 tcgtcgtcgtcatcatcatcatc 38500
>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete sequence Length = 192371 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 152862 tcgtcgtcgtcatcatcatcatc 152884
>gb|AC122411.4| Mus musculus BAC clone RP24-143P19 from chromosome 1, complete sequence Length = 182658 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 182369 tcgtcgtcgtcatcatcatcatc 182391
>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038L23, complete sequence Length = 124582 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 21408 tcgtcgtcgtcatcatcatcatc 21386
>gb|AC116998.3| Mus musculus BAC clone RP23-16F6 from 18, complete sequence Length = 216959 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 51589 tcgtcgtcgtcatcatcatcatc 51611
>gb|AC122845.4| Mus musculus BAC clone RP23-155G2 from 1, complete sequence Length = 215455 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 205787 tcgtcgtcgtcatcatcatcatc 205765
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 63753 tcgtcgtcgtcatcatcatcatc 63775
>gb|AC126805.4| Mus musculus BAC clone RP23-109A15 from 13, complete sequence Length = 177083 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 24065 tcgtcgtcgtcatcatcatcatc 24043
>gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complete sequence Length = 186160 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 169424 tcgtcgtcgtcatcatcatcatc 169402
>gb|AC122317.4| Mus musculus BAC clone RP23-304C21 from 12, complete sequence Length = 173567 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 132548 tcgtcgtcgtcatcatcatcatc 132526
>gb|AC119810.8| Mus musculus chromosome 7, clone RP23-54G21, complete sequence Length = 185939 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 155720 tcgtcgtcgtcatcatcatcatc 155742
>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence Length = 186103 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 tcgtcgtcatcatcatcatcgtt 140 ||||||||||||||||||||||| Sbjct: 33345 tcgtcgtcatcatcatcatcgtt 33323
>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence Length = 182686 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 66232 tcgtcgtcgtcatcatcatcatc 66254
>gb|BC046947.1| Xenopus laevis Aspartyl beta-hydroxylase, mRNA (cDNA clone MGC:53358 IMAGE:5571112), complete cds Length = 2426 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1394 tcgtcgtcgtcatcatcatcatc 1372 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1481 tcgtcgtcgtcatcatcatcatc 1459 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 1391 tcgtcgtcatcatcatcatcatcgt 1367 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 1478 tcgtcgtcatcatcatcatcatcgt 1454
>gb|BC046866.1| Xenopus laevis chromodomain helicase DNA binding protein 4, mRNA (cDNA clone MGC:52739 IMAGE:4683903), complete cds Length = 6398 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 554 tcgtcgtcgtcatcatcatcatc 532
>ref|NM_143372.1| Drosophila melanogaster huntingtin CG9995-RA (htt), mRNA Length = 11579 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1619 tcgtcgtcgtcatcatcatcatc 1597
>gb|AY383684.1| Rattus norvegicus LRRGT00029 mRNA, complete cds Length = 228 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 152 tcgtcgtcgtcatcatcatcatc 130
>gb|AY383673.1| Rattus norvegicus LRRGT00018 mRNA, complete cds Length = 648 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 506 tcgtcgtcgtcatcatcatcatc 484
>gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, complete sequence Length = 198442 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 173544 tcgtcgtcgtcatcatcatcatc 173522
>gb|BC014933.2| Homo sapiens chromosome 19 open reading frame 2, mRNA (cDNA clone IMAGE:3920255), partial cds Length = 1785 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 452 tcgtcgtcgtcatcatcatcatc 430
>gb|BC085577.1| Danio rerio death associated transcription factor 1-like, mRNA (cDNA clone IMAGE:7256204), partial cds Length = 1944 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1045 tcgtcgtcgtcatcatcatcatc 1023
>gb|AC101994.3| Mus musculus chromosome 1, clone RP24-406F14, complete sequence Length = 164170 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 74347 tcgtcgtcgtcatcatcatcatc 74325
>gb|AC164088.2| Mus musculus BAC clone RP23-65F24 from chromosome 16, complete sequence Length = 240181 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 229841 tcgtcgtcgtcatcatcatcatc 229819
>gb|AC166572.1| Mus musculus BAC clone RP23-346L20 from chromosome 16, complete sequence Length = 183111 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 68968 tcgtcgtcgtcatcatcatcatc 68946
>gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome 3, complete sequence Length = 165051 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 63286 tcgtcgtcgtcatcatcatcatc 63308
>gb|AC139045.7| Mus musculus chromosome 7, clone RP23-466H15, complete sequence Length = 186309 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 97634 tcgtcgtcgtcatcatcatcatc 97656
>ref|NM_194353.1| Rattus norvegicus SET translocation (Set), mRNA gb|AY366388.1| Rattus norvegicus liver regeneration related protein LRRGR00002 mRNA, complete cds Length = 858 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 758 tcgtcgtcgtcatcatcatcatc 736
>dbj|AK125092.1| Homo sapiens cDNA FLJ43102 fis, clone CTONG2008689 Length = 3062 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 2227 tcgtcgtcgtcatcatcatcatc 2205
>ref|XM_822826.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.2370) partial mRNA Length = 1668 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1532 tcgtcgtcgtcatcatcatcatc 1510
>dbj|AK001437.1| Homo sapiens cDNA FLJ10575 fis, clone NT2RP2003295, highly similar to Homo sapiens RMP mRNA for RPB5 meidating protein Length = 2235 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 921 tcgtcgtcgtcatcatcatcatc 899
>ref|XM_820803.1| Trypanosoma brucei TREU927 clone RPCI93-29O9 ubiquitin-protein ligase (Tb927.8.1590) partial mRNA Length = 12915 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 7955 tcgtcgtcgtcatcatcatcatc 7933
>ref|XM_823166.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.55.0010) partial mRNA Length = 1713 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 1691 tcgtcgtcgtcatcatcatcatc 1669 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 |||||||| |||||||||||||||| Sbjct: 1688 tcgtcgtcatcatcatcatcatcgt 1664
>gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's Hospital Oakland Research Institute) complete sequence Length = 217309 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 95724 tcgtcgtcgtcatcatcatcatc 95746 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatcgt 139 ||||||||||||||||| ||||||| Sbjct: 95685 tcgtcgtcgtcatcatcgtcatcgt 95709
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 248972 tcgtcgtcgtcatcatcatcatc 248950 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 tcgtcgtcatcatcatcatcgt 139 |||||||||||||||||||||| Sbjct: 163628 tcgtcgtcatcatcatcatcgt 163649
>dbj|AP007165.1| Aspergillus oryzae RIB40 genomic DNA, SC124 Length = 249334 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 233106 tcgtcgtcgtcatcatcatcatc 233128
>ref|XM_385462.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05286.1) partial mRNA Length = 2331 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 2261 tcgtcgtcgtcatcatcatcatc 2239
>dbj|AB108395.1| Phleum pratense DNA, SSR, microsatellite D01-G10 Length = 547 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 312 tcgtcgtcgtcatcatcatcatc 290
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 tcgtcgtcgtcatcatcatcatc 137 ||||||||||||||||||||||| Sbjct: 159510 tcgtcgtcgtcatcatcatcatc 159532 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 tcgtcgtcgtcatcatcatcat 136 |||||||||||||||||||||| Sbjct: 596915 tcgtcgtcgtcatcatcatcat 596894 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 327,481,074 Number of extensions: 21616264 Number of successful extensions: 638819 Number of sequences better than 10.0: 970 Number of HSP's gapped: 638346 Number of HSP's successfully gapped: 1189 Length of query: 1938 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1915 Effective length of database: 18,503,978,556 Effective search space: 35435118934740 Effective search space used: 35435118934740 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)