| Clone Name | FLbaf66e07 |
|---|---|
| Clone Library Name | barley_pub |
>P49216:RS26_ORYSJ 40S ribosomal protein S26 - Oryza sativa subsp. japonica (Rice)| Length = 133 Score = 65.5 bits (158), Expect(2) = 1e-18 Identities = 31/40 (77%), Positives = 33/40 (82%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRFWRR 1039 P LYAKVHHCVSCAIHAHIV V SRENRR+R +RF RR Sbjct: 65 PKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERFRRR 104 Score = 49.7 bits (117), Expect(2) = 1e-18 Identities = 24/29 (82%), Positives = 25/29 (86%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F V NIV QAA+RDVQEACVHDGYVL Sbjct: 36 IKRFQVRNIVEQAAIRDVQEACVHDGYVL 64
>P49206:RS261_ARATH 40S ribosomal protein S26-1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 131 Score = 52.0 bits (123), Expect(2) = 2e-12 Identities = 25/40 (62%), Positives = 28/40 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRFWRR 1039 P LYAK +CVSCAIH+H+V V SR NRR R RF RR Sbjct: 65 PKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRR 104 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F+V NIV QAA+RDVQEA V++GY L Sbjct: 36 IKRFIVRNIVEQAAIRDVQEASVYEGYTL 64
>Q8LPJ7:RS262_ARATH 40S ribosomal protein S26-2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 133 Score = 51.6 bits (122), Expect(2) = 2e-12 Identities = 25/40 (62%), Positives = 28/40 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRFWRR 1039 P LYAK +CVSCAIH+H+V V SR NRR R RF RR Sbjct: 65 PKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARR 104 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F+V NIV QAA+RDVQEA V++GY L Sbjct: 36 IKRFIVRNIVEQAAIRDVQEASVYEGYTL 64
>Q9LYK9:RS263_ARATH 40S ribosomal protein S26-3 - Arabidopsis thaliana (Mouse-ear cress)| Length = 130 Score = 51.6 bits (122), Expect(2) = 2e-12 Identities = 25/40 (62%), Positives = 28/40 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRFWRR 1039 P LYAK +CVSCAIH+H+V V SR NRR R RF RR Sbjct: 65 PKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARR 104 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F+V NIV QAA+RDVQEA V++GY L Sbjct: 36 IKRFIVRNIVEQAAIRDVQEASVYEGYTL 64
>P62856:RS26_RAT 40S ribosomal protein S26 - Rattus norvegicus (Rat)| Length = 115 Score = 44.3 bits (103), Expect(2) = 1e-08 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 36.6 bits (83), Expect(2) = 1e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEASVFDAYVL 64
>P62855:RS26_MOUSE 40S ribosomal protein S26 - Mus musculus (Mouse)| Length = 115 Score = 44.3 bits (103), Expect(2) = 1e-08 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 36.6 bits (83), Expect(2) = 1e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEASVFDAYVL 64
>P61251:RS26_MACFA 40S ribosomal protein S26 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 115 Score = 44.3 bits (103), Expect(2) = 1e-08 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 36.6 bits (83), Expect(2) = 1e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEASVFDAYVL 64
>P62854:RS26_HUMAN 40S ribosomal protein S26 - Homo sapiens (Human)| Length = 115 Score = 44.3 bits (103), Expect(2) = 1e-08 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 36.6 bits (83), Expect(2) = 1e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEASVFDAYVL 64
>Q56JV1:RS26_BOVIN 40S ribosomal protein S26 - Bos taurus (Bovine)| Length = 115 Score = 44.3 bits (103), Expect(2) = 1e-08 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 36.6 bits (83), Expect(2) = 1e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEASVFDAYVL 64
>Q6Q312:RS26_SHEEP 40S ribosomal protein S26 - Ovis aries (Sheep)| Length = 115 Score = 44.3 bits (103), Expect(2) = 2e-08 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 35.8 bits (81), Expect(2) = 2e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEAGVFDAYVL 64
>Q9GT45:RS26_ANOGA 40S ribosomal protein S26 - Anopheles gambiae (African malaria| mosquito) Length = 115 Score = 45.1 bits (105), Expect(2) = 4e-08 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQR 1027 P LYAK+H+CVSCAIH+ +V S+E RR R QR Sbjct: 65 PKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQR 100 Score = 34.3 bits (77), Expect(2) = 4e-08 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ +A V+ YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISDASVYSSYVL 64
>P13008:RS26_DROME 40S ribosomal protein S26 - Drosophila melanogaster (Fruit fly)| Length = 114 Score = 43.9 bits (102), Expect(2) = 4e-08 Identities = 20/31 (64%), Positives = 24/31 (77%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNR 1012 P LYAK+H+CVSCAIH+ +V SRE RR R Sbjct: 65 PKLYAKLHYCVSCAIHSKVVRNRSREARRIR 95 Score = 35.4 bits (80), Expect(2) = 4e-08 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA + D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDITEASIWDSYVL 64
>P30742:RS26_CRICR 40S ribosomal protein S26 - Cricetus cricetus (Black-bellied hamster)| Length = 115 Score = 42.7 bits (99), Expect(2) = 4e-08 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY ++H+CVSCAIH+ +V SRE R++R RF Sbjct: 65 PKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101 Score = 36.6 bits (83), Expect(2) = 4e-08 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEASVFDAYVL 64
>P39939:RS26B_YEAST 40S ribosomal protein S26-B - Saccharomyces cerevisiae (Baker's| yeast) Length = 119 Score = 49.3 bits (116), Expect(2) = 9e-08 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQR 1027 P Y K+H+CVSCAIHA IV V SRE+R+NR QR Sbjct: 65 PKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR 100 Score = 28.9 bits (63), Expect(2) = 9e-08 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK + NIV AAVRD+ EA V+ Y L Sbjct: 36 IKRMAIRNIVEAAAVRDLSEASVYPEYAL 64
>P39938:RS26A_YEAST 40S ribosomal protein S26-A - Saccharomyces cerevisiae (Baker's| yeast) Length = 119 Score = 49.3 bits (116), Expect(2) = 9e-08 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQR 1027 P Y K+H+CVSCAIHA IV V SRE+R+NR QR Sbjct: 65 PKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR 100 Score = 28.9 bits (63), Expect(2) = 9e-08 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK + NIV AAVRD+ EA V+ Y L Sbjct: 36 IKRMAIRNIVEAAAVRDLSEASVYPEYAL 64
>P49171:RS26_PIG 40S ribosomal protein S26 - Sus scrofa (Pig)| Length = 115 Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 20/37 (54%), Positives = 25/37 (67%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE R +R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREARXDRTPPPRF 101 Score = 33.9 bits (76), Expect(2) = 2e-07 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVR + EA V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRXISEASVFDAYVL 64
>Q5JNZ5:RS26L_HUMAN 40S ribosomal protein S26-like 1 - Homo sapiens (Human)| Length = 115 Score = 41.2 bits (95), Expect(2) = 3e-07 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LY K+H+CVSCAIH+ +V SRE ++R RF Sbjct: 65 PKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRF 101 Score = 35.0 bits (79), Expect(2) = 3e-07 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ E V D YVL Sbjct: 36 IKKFVIRNIVEAAAVRDISEVSVFDAYVL 64
>O45499:RS26_CAEEL 40S ribosomal protein S26 - Caenorhabditis elegans| Length = 117 Score = 45.1 bits (105), Expect(2) = 9e-07 Identities = 20/40 (50%), Positives = 28/40 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRFWRR 1039 P LY K+H+C++CAIH+ +V SRE RR+R RF +R Sbjct: 65 PKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRFGQR 104 Score = 29.6 bits (65), Expect(2) = 9e-07 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F+V NIV AAVRD+ +A + Y L Sbjct: 36 IKKFVVRNIVEAAAVRDIGDASAYTQYAL 64
>P27085:RS26_OCTVU 40S ribosomal protein S26 - Octopus vulgaris (Octopus)| Length = 127 Score = 41.2 bits (95), Expect(2) = 2e-06 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNREHLQRF 1030 P LYAK+ +CVSCAIH+ IV SRE R++R RF Sbjct: 65 PKLYAKLLYCVSCAIHSKIVRNRSREARKDRTPPIRF 101 Score = 32.3 bits (72), Expect(2) = 2e-06 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +3 Query: 831 IKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 IK F++ NIV AAVRD+ +A V++ Y L Sbjct: 36 IKKFVIRNIVEAAAVRDISDASVYEVYAL 64
>O93931:RS26_SCHCO 40S ribosomal protein S26 - Schizophyllum commune (Bracket fungus)| Length = 126 Score = 49.3 bits (116), Expect = 4e-05 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNR 1012 P LY K+ +CVSCAIH+H+V V SRE RRNR Sbjct: 65 PKLYIKIAYCVSCAIHSHVVRVRSREGRRNR 95
>P41959:RS26_BRUPA 40S ribosomal protein S26 - Brugia pahangi (Filarial nematode worm)| Length = 83 Score = 34.3 bits (77), Expect(2) = 2e-04 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = +3 Query: 804 GSYSVHNMVIKLFLVTNIV*QAAVRDVQEACVHDGYVL 917 G + + IK F+V NIV AAVRD+ +A +D Y L Sbjct: 27 GRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYAL 64 Score = 32.7 bits (73), Expect(2) = 2e-04 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHI 976 P LY K+H+CVSCAIH+ + Sbjct: 65 PKLYHKLHYCVSCAIHSKV 83
>P21772:RS26_NEUCR 40S ribosomal protein S26E - Neurospora crassa| Length = 119 Score = 45.1 bits (105), Expect = 8e-04 Identities = 20/31 (64%), Positives = 23/31 (74%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNR 1012 P +Y K+ +CVSCAIH IV V SRE RRNR Sbjct: 65 PKMYLKLQYCVSCAIHGKIVRVRSREGRRNR 95
>Q9UT56:RS26A_SCHPO 40S ribosomal protein S26-A - Schizosaccharomyces pombe (Fission| yeast) Length = 120 Score = 43.5 bits (101), Expect = 0.002 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNR 1012 P +Y K+ +CVSCAIHA +V V SRE RR R Sbjct: 65 PKIYVKLQYCVSCAIHARVVRVRSREGRRIR 95
>Q9UTG4:RS26B_SCHPO 40S ribosomal protein S26-B - Schizosaccharomyces pombe (Fission| yeast) Length = 119 Score = 42.7 bits (99), Expect = 0.004 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNR 1012 P LY K+ +CVSCAIH+ +V V SRE RR R Sbjct: 65 PKLYIKLQYCVSCAIHSRVVRVRSREGRRIR 95
>Q9BHU1:RS26_OXYNO 40S ribosomal protein S26 - Oxytricha nova| Length = 125 Score = 42.4 bits (98), Expect = 0.005 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +2 Query: 920 P*LYAKVHHCVSCAIHAHIVGVHSRENRRNR 1012 P +Y K+ +CVSCAIHA IV V S E+RR+R Sbjct: 67 PKIYVKLSYCVSCAIHARIVRVRSVEDRRHR 97
>Q40240:MPA5A_LOLPR Major pollen allergen Lol p 5a precursor - Lolium perenne (Perennial| ryegrass) Length = 308 Score = 32.0 bits (71), Expect = 7.0 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Frame = -1 Query: 1187 PVSNTPPSRRRLREPYPC-------TRHTTWWASILTRLEKLVNGQKIDQPAAVFKTCAR 1029 P S++PPSR R P P ++ + A++ + + QK +PAA T A Sbjct: 219 PTSSSPPSRPRSSRPTPPPSPAAPEVKYAVFEAALTKAITAMTQAQKAGKPAAAAATAAA 278 Query: 1028 NAADA 1014 A A Sbjct: 279 TVATA 283
>Q6DYE4:Y1609_ARATH Uncharacterized protein At1g26090, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 455 Score = 31.6 bits (70), Expect = 9.2 Identities = 27/89 (30%), Positives = 40/89 (44%) Frame = -2 Query: 1063 TSQQPFSKPAPETLQMLTVPPVLTGVDTDNVGMDGTRNTVVHLGVQLWWRTYPSCTQASC 884 TSQ P + P +VP +TG+D D + +D +++ R S T + Sbjct: 330 TSQIPKADFVPLPFASASVPFTITGLDWDKILLDQANSSI---------RELLSETVSHG 380 Query: 883 TSLTAACYTMFVTKKSLITMLCTE*EPTE 797 TSLT MF T K L+T+ E +E Sbjct: 381 TSLTQT--VMFDTAKKLVTLFMPGFEKSE 407 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 240,917,934 Number of extensions: 5034839 Number of successful extensions: 12476 Number of sequences better than 10.0: 27 Number of HSP's gapped: 12452 Number of HSP's successfully gapped: 47 Length of query: 502 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 385 Effective length of database: 68,593,924 Effective search space: 26408660740 Effective search space used: 26408660740 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)