>P36290:POLG_CXA24 Genome polyprotein [Contains: Capsid protein VP4 - Coxsackievirus|
           A24 (strain EH24/70)
          Length = 2214
 Score = 30.8 bits (68), Expect = 5.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 549 TIISTEELPPRWCPASSSFCLEGHFESPCGAP 454
           T+ +T+ LP    P SS F     F+SPC  P
Sbjct: 335 TVPATQGLPTMLTPGSSQFLTSDDFQSPCALP 366

>O13606:MEI4_SCHPO Meiosis-specific transcription factor mei4 - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 517

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 483 GHFESPCGAPAQHCAVSSSSPASLFFVRMACPSSTVLHFCRHK 355
           G  ++ C AP   C+   +SP+S        PSS  L   +H+
Sbjct: 392 GRTDTSCSAPGAFCSTQINSPSSYINYSKCAPSSPTLSLQKHR 434

>P40798:STC_DROME Protein shuttle craft - Drosophila melanogaster (Fruit fly)|
          Length = 1106

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 359 CRQKCNTVDEGHAIR--TKKRLAGLLELTAQCC 451
           CRQ CN  D+    R  TKKR  G  +   +CC
Sbjct: 684 CRQLCNRADDARCKRRCTKKRSCGKHKCNVECC 716

>Q8N196:SIX5_HUMAN Homeobox protein SIX5 - Homo sapiens (Human)|
          Length = 739

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 525 PPRWCPASSSFCLEGHFESPCGAPA 451
           PP  CPASSS  + G F +  G+PA
Sbjct: 311 PPAPCPASSSILVNGSFLAASGSPA 335

>Q9ERS7:ILRL2_MOUSE Interleukin-1 receptor-like 2 precursor - Mus musculus (Mouse)|
          Length = 574

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 606 RWIGNYVQQKDFRHSNLTRTIISTEELPPRWCPASSSFCLEGHFESPCGAPAQHC 442
           +W G++ +Q     +   + +     +PPR  PASS   L GH   PC   A  C
Sbjct: 515 QWDGDFTEQSQCAKTKFWKKV--RYHMPPRRYPASSPVQLLGHI--PCNCKAGKC 565


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 121,620,446
Number of extensions: 2527659
Number of successful extensions: 5682
Number of sequences better than 10.0: 5
Number of HSP's gapped: 5682
Number of HSP's successfully gapped: 5
Length of query: 249
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 139
Effective length of database: 70,513,989
Effective search space: 9801444471
Effective search space used: 9801444471
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)