ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf68p13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066503:Os03g0145500 | 192 | 4e-49 | 2 | AK067308:Os02g0777100 | 38 | 0.011 | 3 | Os04g0543500:Os04g0543500 | 31 | 1.7 | 4 | Os10g0411100:Os10g0411100 | 29 | 4.9 | 5 | Os03g0636700:Os03g0636700 | 29 | 4.9 | 6 | AK102445:Os09g0424300 | 29 | 4.9 | 7 | AK101535:Os09g0424300 | 29 | 4.9 | 8 | AK100397:Os09g0424300 | 29 | 4.9 | 9 | AK067682:Os09g0424300 | 29 | 4.9 | 10 | AK067201:Os01g0920300 | 28 | 8.4 | 11 | AK062088:Os01g0920300 | 28 | 8.4 |
|---|
>AK066503:Os03g0145500 | Length = 941 Score = 192 bits (487), Expect = 4e-49 Identities = 113/216 (52%), Positives = 124/216 (57%), Gaps = 19/216 (8%) Frame = +2 Query: 353 SPSVSESREGS--------ASPS---GQXXXXXXXXXXNWGALSGAAGSPGMEDXXXXXX 499 SPSVSE RE S ASPS + N A GSP E+ Sbjct: 88 SPSVSEPREESGSVDTGSAASPSVLRSEQRARGAEEQENSMAAQLGEGSPAREETKSRIS 147 Query: 500 XXXXXXXXXXXXXX------QIRPHPRHVXXXXXXXXXXXXXXAWKWGPVXXXXXAERSP 661 QI+ RHV AWKWGP+ ERSP Sbjct: 148 SAPSSPVLSGTSTSSSSPLSQIKHQARHVRTGSFQRFRQQMQRAWKWGPIGSGGGGERSP 207 Query: 662 REQLLRTTVNIEAMANQKRQWYQIHAK--DQNQFKEPSSLFEHFFVVGLHSYANVAVIED 835 REQLLRTTVN EAMA+QKRQWYQI +K D Q+KEP++LFEHFFVVGLHSYANV VIED Sbjct: 208 REQLLRTTVNFEAMAHQKRQWYQIQSKSRDNKQYKEPTTLFEHFFVVGLHSYANVGVIED 267 Query: 836 AFAKKKAWESNVACSEVVDLSKIQYHGPIPTMEPQV 943 AFAKKKAWESNV SE+VDL KIQYHGPIPTMEPQ+ Sbjct: 268 AFAKKKAWESNVEHSEIVDLRKIQYHGPIPTMEPQI 303
>AK067308:Os02g0777100 | Length = 832 Score = 38.1 bits (87), Expect = 0.011 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +2 Query: 689 NIEAMANQKRQW--YQIHAKDQNQFKEPSSLFEHFFVVGLHSYANVAVIED 835 N E + QKRQW +Q+ + +EPS LFE +VGL A++ +E+ Sbjct: 82 NPEVLTTQKRQWSRFQLKSLGNRCIREPSHLFESIVIVGLPPQADIHELEN 132
>Os04g0543500:Os04g0543500 | Length = 260 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -3 Query: 480 SSIPGEPAAPDRAPQFPSSSSAPLARCPDGEALPSRDSETEGD 352 S P PA+P P PSS R PDG+A D+E +G+ Sbjct: 106 SPSPPPPASPPPLPPAPSSPPPKKRRLPDGDA--DADAEDDGE 146
>Os10g0411100:Os10g0411100 | Length = 216 Score = 29.3 bits (64), Expect = 4.9 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 754 LILILGVDLIPLPLLVRHSLNVDRSAQQLL 665 L+ +L L P+P+L RH NV SAQ +L Sbjct: 69 LLSVLACPLSPVPVLPRHPRNVASSAQYIL 98
>Os03g0636700:Os03g0636700 | Length = 447 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -3 Query: 447 RAPQFPSSSSAPLARCPDGEALPSRDSE 364 R + PS +SAP A CP G LP DSE Sbjct: 392 RVQRCPSQASAP-ASCPWGSRLPDHDSE 418
>AK102445:Os09g0424300 | Length = 392 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/43 (44%), Positives = 20/43 (46%) Frame = +2 Query: 755 FKEPSSLFEHFFVVGLHSYANVAVIEDAFAKKKAWESNVACSE 883 F E S+ FF GL S N VI DAF KK W A E Sbjct: 140 FLEEVSVLNSFFG-GLKSGGNAYVIGDAFKPKKKWHVYYATEE 181
>AK101535:Os09g0424300 | Length = 392 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/43 (44%), Positives = 20/43 (46%) Frame = +2 Query: 755 FKEPSSLFEHFFVVGLHSYANVAVIEDAFAKKKAWESNVACSE 883 F E S+ FF GL S N VI DAF KK W A E Sbjct: 140 FLEEVSVLNSFFG-GLKSGGNAYVIGDAFKPKKKWHVYYATEE 181
>AK100397:Os09g0424300 | Length = 392 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/43 (44%), Positives = 20/43 (46%) Frame = +2 Query: 755 FKEPSSLFEHFFVVGLHSYANVAVIEDAFAKKKAWESNVACSE 883 F E S+ FF GL S N VI DAF KK W A E Sbjct: 140 FLEEVSVLNSFFG-GLKSGGNAYVIGDAFKPKKKWHVYYATEE 181
>AK067682:Os09g0424300 | Length = 392 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/43 (44%), Positives = 20/43 (46%) Frame = +2 Query: 755 FKEPSSLFEHFFVVGLHSYANVAVIEDAFAKKKAWESNVACSE 883 F E S+ FF GL S N VI DAF KK W A E Sbjct: 140 FLEEVSVLNSFFG-GLKSGGNAYVIGDAFKPKKKWHVYYATEE 181
>AK067201:Os01g0920300 | Length = 318 Score = 28.5 bits (62), Expect = 8.4 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +2 Query: 791 VVGLHSYANVAVIEDAFAKKKAWESNVACSEVVDLSKIQYHGPIPTMEPQVGCFV 955 VV L+S A V + A +KK +V C E+ LSK+ + + P +GC + Sbjct: 109 VVDLYSGAGVIGLSLAASKKCR---SVKCVEINKLSKMSFEKSASRLPPNLGCTI 160
>AK062088:Os01g0920300 | Length = 228 Score = 28.5 bits (62), Expect = 8.4 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +2 Query: 791 VVGLHSYANVAVIEDAFAKKKAWESNVACSEVVDLSKIQYHGPIPTMEPQVGCFV 955 VV L+S A V + A +KK +V C E+ LSK+ + + P +GC + Sbjct: 19 VVDLYSGAGVIGLSLAASKKCR---SVKCVEINKLSKMSFEKSASRLPPNLGCTI 70 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,114,791 Number of extensions: 317110 Number of successful extensions: 1158 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1153 Number of HSP's successfully gapped: 11 Length of query: 354 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 252 Effective length of database: 11,315,673 Effective search space: 2851549596 Effective search space used: 2851549596 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
