ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK110279: 27 4.3
2AK062303:Os09g0488700 26 5.6
3AK110077: 26 5.6
4AK070652:Os02g0739400 26 5.6
5AK063371:Os06g0140100 25 9.6

>AK110279: |
          Length = 844
 Score = 26.6 bits (57), Expect = 4.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 34  LQVKVLAYGLLNSTACDLRASRVIRDPTLPPQ 129
           LQVK ++ G L+   CD     +  DP+  PQ
Sbjct: 251 LQVKGISVGKLSPNICDTAGHIIWEDPSTSPQ 282



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>AK062303:Os09g0488700 |
          Length = 348

 Score = 26.2 bits (56), Expect = 5.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 13  QSLPLSKLQVKVLAYGLLNSTACDLRASRVIRDPTLPPQ 129
           Q L L +L V+ +   LL          R+IR P LPPQ
Sbjct: 268 QKLSLHRLAVRPIQLHLLMWEKPSGPVERIIRSPKLPPQ 306



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>AK110077: |
          Length = 1242

 Score = 26.2 bits (56), Expect = 5.6
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -2

Query: 161  HW*--SSTQSDSGCGGSVGSLITLLARRSQAVEFS 63
            HW   S+  +D    GSV + +TLL+R++  V+F+
Sbjct: 934  HWLRNSAVAADHAAAGSVETAMTLLSRQAGIVDFA 968



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>AK070652:Os02g0739400 |
          Length = 373

 Score = 26.2 bits (56), Expect = 5.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 161 HW*SSTQSDSGCGGSVGSLITLLARRSQAVEF 66
           H+ ++     GCGG VG L T +A    ++ F
Sbjct: 93  HFLAAADGGEGCGGGVGELRTAVAASFPSLRF 124



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>AK063371:Os06g0140100 |
          Length = 340

 Score = 25.4 bits (54), Expect = 9.6
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = +1

Query: 10  EQSLPLSKLQVKVLAYGLLNSTACDL-RASRVIR----DPTLPPQPLSLCVLDY 156
           E S+ + K +V+   Y L ++   D+ +   VI+    DPTLP   ++ CVL Y
Sbjct: 154 EASISIEKGEVRSAHYKLFSADIRDIPKLDSVIQMAEMDPTLPTFIIAECVLIY 207


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 8,275,673
Number of extensions: 181255
Number of successful extensions: 387
Number of sequences better than 10.0: 5
Number of HSP's gapped: 387
Number of HSP's successfully gapped: 5
Length of query: 94
Length of database: 15,399,855
Length adjustment: 64
Effective length of query: 30
Effective length of database: 12,837,231
Effective search space: 385116930
Effective search space used: 385116930
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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