ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in... 42 1.0
2gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 40 4.0
3gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 ... 40 4.0
4gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell... 40 4.0
5emb|AJ238845.1|BNA238845 Brassica napus mRNA for MAP3K epsilon 1... 40 4.0

>emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in linkage group 4,
            complete sequence
          Length = 195795
 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 100  gtaatcagggatcccacactt 120
            |||||||||||||||||||||
Sbjct: 8436 gtaatcagggatcccacactt 8456



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>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 203      tactgcggcaatggcttgctattgcggc 230
                |||||||||||| |||||||| ||||||
Sbjct: 14389295 tactgcggcaattgcttgctaatgcggc 14389322



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>gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 map q34, complete
              sequence
          Length = 142440

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    atcccacacttccaccacaaccac 133
              |||||||||||||||||| |||||
Sbjct: 118261 atcccacacttccaccaccaccac 118238



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>gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 175316

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 203    tactgcggcaatggcttgctattgcggc 230
              |||||||||||| |||||||| ||||||
Sbjct: 141087 tactgcggcaattgcttgctaatgcggc 141114



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>emb|AJ238845.1|BNA238845 Brassica napus mRNA for MAP3K epsilon 1 protein kinase
          Length = 4344

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ctgctgaactcaactgcctg 80
            ||||||||||||||||||||
Sbjct: 1903 ctgctgaactcaactgcctg 1884


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 40,665,839
Number of extensions: 1963953
Number of successful extensions: 137704
Number of sequences better than 10.0: 5
Number of HSP's gapped: 137704
Number of HSP's successfully gapped: 5
Length of query: 282
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 260
Effective length of database: 18,508,616,841
Effective search space: 4812240378660
Effective search space used: 4812240378660
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 13 (26.3 bits)
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