No.
Definition
Score (bits)
E Value
1 ref|NM_001049726.1| Oryza sativa (japonica cultivar-group) Os01g...
369
5e-98
2 dbj|AK111708.1| Oryza sativa (japonica cultivar-group) cDNA clon...
369
5e-98
3 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
283
2e-72
4 dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic D...
283
2e-72
5 ref|NM_001070597.1| Oryza sativa (japonica cultivar-group) Os10g...
58
2e-04
6 gb|AC116601.1| Oryza sativa (japonica cultivar-group) chromosome...
56
9e-04
7 gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome...
56
9e-04
8 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
56
9e-04
9 gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, c...
56
9e-04
10 ref|XM_969978.1| PREDICTED: Tribolium castaneum similar to CG303...
46
0.85
11 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.85
12 gb|AC151485.5| Monodelphis domestica, clone XX-214B11, complete ...
46
0.85
13 gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete se...
46
0.85
14 emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb...
46
0.85
15 gb|AC193777.1| Solanum lycopersicum chromosome 1 clone C01HBa005...
44
3.4
16 emb|CR855125.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
44
3.4
17 emb|CR855093.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
44
3.4
18 ref|XM_454458.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E11253g ...
44
3.4
19 gb|AC112499.8| Homo sapiens X BAC RP11-2N21 (Roswell Park Cancer...
44
3.4
20 emb|CR936460.7| Zebrafish DNA sequence from clone DKEY-236E20 in...
44
3.4
21 emb|Z38062.1|SC9687 S.cerevisiae chromosome IX cosmid 9687
44
3.4
22 emb|X79743.1|SCBPPS S.cerevisiae BET1, PAN1 PRI1 and STS1 genes
44
3.4
23 emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...
44
3.4
24 emb|AL606705.23| Zebrafish DNA sequence from clone BUSM1-175P5 i...
44
3.4
25 ref|XM_624804.1| PREDICTED: Apis mellifera similar to CG2330-PA ...
44
3.4
26 dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D...
44
3.4
27 emb|BX640535.7| Zebrafish DNA sequence from clone DKEY-85K22 in ...
44
3.4
28 emb|BX248506.9| Zebrafish DNA sequence from clone DKEY-70K11 in ...
44
3.4
29 emb|BX248511.4| Zebrafish DNA sequence from clone CH211-243G18 i...
44
3.4
30 emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, ...
44
3.4
31 gb|M90688.1|YSCPAN1A Saccharomyces cerevisiae PAB-dependent poly...
44
3.4
>ref|NM_001049726.1 | Oryza sativa (japonica cultivar-group) Os01g0515300 (Os01g0515300)
mRNA, partial cds
Length = 3653
Score = 369 bits (186), Expect = 5e-98
Identities = 553/674 (82%), Gaps = 6/674 (0%)
Strand = Plus / Plus
Query: 2484 ttctctgtatggagctttgatggcagaatggcgtttgaggatattatcaatgcaactgac 2543
|||||||||||||| |||||||| | |||||| ||||| ||||| || | ||||| |||
Sbjct: 2429 ttctctgtatggagttttgatggtaaaatggcatttgatgatataattagcgcaaccgac 2488
Query: 2544 aattttgatgagaaacattgcattggagagggatcatacggcagtgtttataaagcagaa 2603
|||||||||||||| |||||||||||||||||| |||| || |||| || |||||||||
Sbjct: 2489 aattttgatgagaagcattgcattggagagggagcatatggtcgtgtatacaaagcagaa 2548
Query: 2604 cttcagagtaaagaagtggttgcagtaaagaaactacatgcagctgatgaagatgcag-- 2661
||| | ||| ||||| |||| || |||||||| ||| ||| |||||||||| | |
Sbjct: 2549 cttgaagataagcaagtgtttgcggtgaagaaactccatccagatgatgaagatactgta 2608
Query: 2662 -atgatgaagaaaggttccagcatgagattgaaatgttaacaaaaattcgccaacgcaac 2720
| |||||||| || || ||| ||||||||||||||| ||||||| || || || | |
Sbjct: 2609 cacgatgaagagagatttcagattgagattgaaatgttggcaaaaatccgacatcgtagc 2668
Query: 2721 atcgtcaagttgtatggatattgttctcatccgcggtacaggttccttgtatgtcagttt 2780
|| || ||||||||||||| |||| |||||| |||||||||| || || ||||| |
Sbjct: 2669 atagtgaagttgtatggattctgttgtcatccaaggtacaggtttctcgtttgtcaatac 2728
Query: 2781 atagagaaaggaaatctagcttctatcctaagcaatgaagaactagcaatccagttccat 2840
||||||| |||||| |||||||||||| ||| ||||||||| |||| ||| ||||| ||
Sbjct: 2729 atagagagaggaaacctagcttctatcttaaataatgaagaagtagccatcgagttctat 2788
Query: 2841 tggcaaagaaggacggctctcataagagatgtggctcaagccctcacttacctccatcat 2900
||| |||||||| | |||||||||||||| |||||||| | ||||| || ||||
Sbjct: 2789 tggatgagaaggacaaccctcataagagatgtagctcaagcaattacttatct---tcat 2845
Query: 2901 gatgttcacccgcccataattcatcgagacatcacaagcagaaacatcttactagatgct 2960
||| ||| || |||||||||||||| ||||| || ||| ||||||||||||| |||| |
Sbjct: 2846 gattgtcagcctcccataattcatcgtgacattacgagcggaaacatcttactggatgtt 2905
Query: 2961 gattacaaagcattcgtctcggacttcggtattgcgagaatgttaaaacctgattcgtcg 3020
||||| | ||||| |||||||| || || ||||| ||||| ||||||| ||||| ||
Sbjct: 2906 gattatagagcatatgtctcggattttggcattgcaagaattctaaaaccggattcatca 2965
Query: 3021 aattggagtgcactagcggggacctatggctacatagcacctgaattttcctacacatcg 3080
|||||||||||| |||| |||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 2966 aattggagtgcattagctgggacctatggctatatagcacctgaattgtcctacacctcc 3025
Query: 3081 caagttacggaaaaatgtgacgtatatagctttggtgttgtggcgcttgaggtgttaatg 3140
||| ||||| |||||||||||||||||||| |||||||||| |||||||||| | |||
Sbjct: 3026 ttagtcacggagaaatgtgacgtatatagcttcggtgttgtggtgcttgaggtgctgatg 3085
Query: 3141 gggaaacatcctgg 3154
|| |||||||||||
Sbjct: 3086 ggcaaacatcctgg 3099
Score = 115 bits (58), Expect = 1e-21
Identities = 154/186 (82%)
Strand = Plus / Plus
Query: 2118 atgtttgtaaacttctcacacaatcaattcagtggtgccatccctgtttcggttgcaagc 2177
|||| ||||||||| |||||||||||||| |||||||| ||||||| || |||||||
Sbjct: 2066 atgtatgtaaacttgtcacacaatcaatttagtggtgctatccctggctcaattgcaagt 2125
Query: 2178 atgcaaagcctaacaatatttgatgtatcatacaacttcctagaagggtctatcccaaaa 2237
|||||||| ||| || | |||||||| |||||||| |||| ||||| |||| || | |
Sbjct: 2126 atgcaaagtctatcagtgtttgatgtgtcatacaatgtcctcgaaggtcctattcctaga 2185
Query: 2238 gggattcacaatgcatcagcagaatggtttctccacaacaaagatctttgtggagacctt 2297
| | ||||||||||| ||| |||||||| |||||||||||| |||||||||||| |||
Sbjct: 2186 ccgctccacaatgcatcggcaaaatggtttgtccacaacaaaggtctttgtggagaactt 2245
Query: 2298 gttggc 2303
| ||||
Sbjct: 2246 gctggc 2251
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 227 acccgtgcaactggaccggcatcacctgcggcgac 261
|||||||||||||||| ||||||||||||||||||
Sbjct: 174 acccgtgcaactggactggcatcacctgcggcgac 208
Score = 54.0 bits (27), Expect = 0.003
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 569 aaatccctcctgccttgggtaatctctcaagacttgcctttctttatctccctgggaata 628
||||||||||||| |||||||| || ||| ||| | | ||||| ||||| ||| ||||
Sbjct: 519 aaatccctcctgcgttgggtaaccttacaaagcttacttatctttctctccttggcaata 578
Query: 629 ggctctcaggtaacatcccatggcaccttgg 659
||| || ||||||||||||||||| |||||
Sbjct: 579 agctgtccggtaacatcccatggcagcttgg 609
Score = 52.0 bits (26), Expect = 0.014
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1273 aaaacaaattgtctggaccaatccatcaaagttttgggaaattggagagcgtga 1326
||||| |||||||||| ||||||| || ||||| || ||||||||||||||||
Sbjct: 1221 aaaaccaattgtctggtccaatccctccgagtttgggaaaattggagagcgtga 1274
Score = 50.1 bits (25), Expect = 0.054
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1698 gcagacaacatgatagaaggtagtataccttctgagttggggatgctaaaaaatctt 1754
|||||||| |||||| |||| |||||||||||||| | |||| ||||||||||||
Sbjct: 1646 gcagacaatatgataaaaggcggtataccttctgagcttgggaatctaaaaaatctt 1702
>dbj|AK111708.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023022C01, full
insert sequence
Length = 3654
Score = 369 bits (186), Expect = 5e-98
Identities = 553/674 (82%), Gaps = 6/674 (0%)
Strand = Plus / Plus
Query: 2484 ttctctgtatggagctttgatggcagaatggcgtttgaggatattatcaatgcaactgac 2543
|||||||||||||| |||||||| | |||||| ||||| ||||| || | ||||| |||
Sbjct: 2430 ttctctgtatggagttttgatggtaaaatggcatttgatgatataattagcgcaaccgac 2489
Query: 2544 aattttgatgagaaacattgcattggagagggatcatacggcagtgtttataaagcagaa 2603
|||||||||||||| |||||||||||||||||| |||| || |||| || |||||||||
Sbjct: 2490 aattttgatgagaagcattgcattggagagggagcatatggtcgtgtatacaaagcagaa 2549
Query: 2604 cttcagagtaaagaagtggttgcagtaaagaaactacatgcagctgatgaagatgcag-- 2661
||| | ||| ||||| |||| || |||||||| ||| ||| |||||||||| | |
Sbjct: 2550 cttgaagataagcaagtgtttgcggtgaagaaactccatccagatgatgaagatactgta 2609
Query: 2662 -atgatgaagaaaggttccagcatgagattgaaatgttaacaaaaattcgccaacgcaac 2720
| |||||||| || || ||| ||||||||||||||| ||||||| || || || | |
Sbjct: 2610 cacgatgaagagagatttcagattgagattgaaatgttggcaaaaatccgacatcgtagc 2669
Query: 2721 atcgtcaagttgtatggatattgttctcatccgcggtacaggttccttgtatgtcagttt 2780
|| || ||||||||||||| |||| |||||| |||||||||| || || ||||| |
Sbjct: 2670 atagtgaagttgtatggattctgttgtcatccaaggtacaggtttctcgtttgtcaatac 2729
Query: 2781 atagagaaaggaaatctagcttctatcctaagcaatgaagaactagcaatccagttccat 2840
||||||| |||||| |||||||||||| ||| ||||||||| |||| ||| ||||| ||
Sbjct: 2730 atagagagaggaaacctagcttctatcttaaataatgaagaagtagccatcgagttctat 2789
Query: 2841 tggcaaagaaggacggctctcataagagatgtggctcaagccctcacttacctccatcat 2900
||| |||||||| | |||||||||||||| |||||||| | ||||| || ||||
Sbjct: 2790 tggatgagaaggacaaccctcataagagatgtagctcaagcaattacttatct---tcat 2846
Query: 2901 gatgttcacccgcccataattcatcgagacatcacaagcagaaacatcttactagatgct 2960
||| ||| || |||||||||||||| ||||| || ||| ||||||||||||| |||| |
Sbjct: 2847 gattgtcagcctcccataattcatcgtgacattacgagcggaaacatcttactggatgtt 2906
Query: 2961 gattacaaagcattcgtctcggacttcggtattgcgagaatgttaaaacctgattcgtcg 3020
||||| | ||||| |||||||| || || ||||| ||||| ||||||| ||||| ||
Sbjct: 2907 gattatagagcatatgtctcggattttggcattgcaagaattctaaaaccggattcatca 2966
Query: 3021 aattggagtgcactagcggggacctatggctacatagcacctgaattttcctacacatcg 3080
|||||||||||| |||| |||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 2967 aattggagtgcattagctgggacctatggctatatagcacctgaattgtcctacacctcc 3026
Query: 3081 caagttacggaaaaatgtgacgtatatagctttggtgttgtggcgcttgaggtgttaatg 3140
||| ||||| |||||||||||||||||||| |||||||||| |||||||||| | |||
Sbjct: 3027 ttagtcacggagaaatgtgacgtatatagcttcggtgttgtggtgcttgaggtgctgatg 3086
Query: 3141 gggaaacatcctgg 3154
|| |||||||||||
Sbjct: 3087 ggcaaacatcctgg 3100
Score = 115 bits (58), Expect = 1e-21
Identities = 154/186 (82%)
Strand = Plus / Plus
Query: 2118 atgtttgtaaacttctcacacaatcaattcagtggtgccatccctgtttcggttgcaagc 2177
|||| ||||||||| |||||||||||||| |||||||| ||||||| || |||||||
Sbjct: 2067 atgtatgtaaacttgtcacacaatcaatttagtggtgctatccctggctcaattgcaagt 2126
Query: 2178 atgcaaagcctaacaatatttgatgtatcatacaacttcctagaagggtctatcccaaaa 2237
|||||||| ||| || | |||||||| |||||||| |||| ||||| |||| || | |
Sbjct: 2127 atgcaaagtctatcagtgtttgatgtgtcatacaatgtcctcgaaggtcctattcctaga 2186
Query: 2238 gggattcacaatgcatcagcagaatggtttctccacaacaaagatctttgtggagacctt 2297
| | ||||||||||| ||| |||||||| |||||||||||| |||||||||||| |||
Sbjct: 2187 ccgctccacaatgcatcggcaaaatggtttgtccacaacaaaggtctttgtggagaactt 2246
Query: 2298 gttggc 2303
| ||||
Sbjct: 2247 gctggc 2252
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 227 acccgtgcaactggaccggcatcacctgcggcgac 261
|||||||||||||||| ||||||||||||||||||
Sbjct: 175 acccgtgcaactggactggcatcacctgcggcgac 209
Score = 54.0 bits (27), Expect = 0.003
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 569 aaatccctcctgccttgggtaatctctcaagacttgcctttctttatctccctgggaata 628
||||||||||||| |||||||| || ||| ||| | | ||||| ||||| ||| ||||
Sbjct: 520 aaatccctcctgcgttgggtaaccttacaaagcttacttatctttctctccttggcaata 579
Query: 629 ggctctcaggtaacatcccatggcaccttgg 659
||| || ||||||||||||||||| |||||
Sbjct: 580 agctgtccggtaacatcccatggcagcttgg 610
Score = 52.0 bits (26), Expect = 0.014
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1273 aaaacaaattgtctggaccaatccatcaaagttttgggaaattggagagcgtga 1326
||||| |||||||||| ||||||| || ||||| || ||||||||||||||||
Sbjct: 1222 aaaaccaattgtctggtccaatccctccgagtttgggaaaattggagagcgtga 1275
Score = 50.1 bits (25), Expect = 0.054
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1698 gcagacaacatgatagaaggtagtataccttctgagttggggatgctaaaaaatctt 1754
|||||||| |||||| |||| |||||||||||||| | |||| ||||||||||||
Sbjct: 1647 gcagacaatatgataaaaggcggtataccttctgagcttgggaatctaaaaaatctt 1703
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 283 bits (143), Expect = 2e-72
Identities = 474/583 (81%), Gaps = 6/583 (1%)
Strand = Plus / Plus
Query: 2484 ttctctgtatggagctttgatggcagaatggcgtttgaggatattatcaatgcaactgac 2543
|||||||||||||| |||||||| | |||||| ||||| ||||| || | ||||| |||
Sbjct: 18227858 ttctctgtatggagttttgatggtaaaatggcatttgatgatataattagcgcaaccgac 18227917
Query: 2544 aattttgatgagaaacattgcattggagagggatcatacggcagtgtttataaagcagaa 2603
|||||||||||||| |||||||||||||||||| |||| || |||| || |||||||||
Sbjct: 18227918 aattttgatgagaagcattgcattggagagggagcatatggtcgtgtatacaaagcagaa 18227977
Query: 2604 cttcagagtaaagaagtggttgcagtaaagaaactacatgcagctgatgaagatgcag-- 2661
||| | ||| ||||| |||| || |||||||| ||| ||| |||||||||| | |
Sbjct: 18227978 cttgaagataagcaagtgtttgcggtgaagaaactccatccagatgatgaagatactgta 18228037
Query: 2662 -atgatgaagaaaggttccagcatgagattgaaatgttaacaaaaattcgccaacgcaac 2720
| |||||||| || || ||| ||||||||||||||| ||||||| || || || | |
Sbjct: 18228038 cacgatgaagagagatttcagattgagattgaaatgttggcaaaaatccgacatcgtagc 18228097
Query: 2721 atcgtcaagttgtatggatattgttctcatccgcggtacaggttccttgtatgtcagttt 2780
|| || ||||||||||||| |||| |||||| |||||||||| || || ||||| |
Sbjct: 18228098 atagtgaagttgtatggattctgttgtcatccaaggtacaggtttctcgtttgtcaatac 18228157
Query: 2781 atagagaaaggaaatctagcttctatcctaagcaatgaagaactagcaatccagttccat 2840
||||||| |||||| |||||||||||| ||| ||||||||| |||| ||| ||||| ||
Sbjct: 18228158 atagagagaggaaacctagcttctatcttaaataatgaagaagtagccatcgagttctat 18228217
Query: 2841 tggcaaagaaggacggctctcataagagatgtggctcaagccctcacttacctccatcat 2900
||| |||||||| | |||||||||||||| |||||||| | ||||| || ||||
Sbjct: 18228218 tggatgagaaggacaaccctcataagagatgtagctcaagcaattacttatct---tcat 18228274
Query: 2901 gatgttcacccgcccataattcatcgagacatcacaagcagaaacatcttactagatgct 2960
||| ||| || |||||||||||||| ||||| || ||| ||||||||||||| |||| |
Sbjct: 18228275 gattgtcagcctcccataattcatcgtgacattacgagcggaaacatcttactggatgtt 18228334
Query: 2961 gattacaaagcattcgtctcggacttcggtattgcgagaatgttaaaacctgattcgtcg 3020
||||| | ||||| |||||||| || || ||||| ||||| ||||||| ||||| ||
Sbjct: 18228335 gattatagagcatatgtctcggattttggcattgcaagaattctaaaaccggattcatca 18228394
Query: 3021 aattggagtgcactagcggggacctatggctacatagcacctg 3063
|||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 18228395 aattggagtgcattagctgggacctatggctatatagcacctg 18228437
Score = 115 bits (58), Expect = 1e-21
Identities = 154/186 (82%)
Strand = Plus / Plus
Query: 2118 atgtttgtaaacttctcacacaatcaattcagtggtgccatccctgtttcggttgcaagc 2177
|||| ||||||||| |||||||||||||| |||||||| ||||||| || |||||||
Sbjct: 18227495 atgtatgtaaacttgtcacacaatcaatttagtggtgctatccctggctcaattgcaagt 18227554
Query: 2178 atgcaaagcctaacaatatttgatgtatcatacaacttcctagaagggtctatcccaaaa 2237
|||||||| ||| || | |||||||| |||||||| |||| ||||| |||| || | |
Sbjct: 18227555 atgcaaagtctatcagtgtttgatgtgtcatacaatgtcctcgaaggtcctattcctaga 18227614
Query: 2238 gggattcacaatgcatcagcagaatggtttctccacaacaaagatctttgtggagacctt 2297
| | ||||||||||| ||| |||||||| |||||||||||| |||||||||||| |||
Sbjct: 18227615 ccgctccacaatgcatcggcaaaatggtttgtccacaacaaaggtctttgtggagaactt 18227674
Query: 2298 gttggc 2303
| ||||
Sbjct: 18227675 gctggc 18227680
Score = 87.7 bits (44), Expect = 2e-13
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3087 acggaaaaatgtgacgtatatagctttggtgttgtggcgcttgaggtgttaatggggaaa 3146
||||| |||||||||||||||||||| |||||||||| |||||||||| | ||||| |||
Sbjct: 18228579 acggagaaatgtgacgtatatagcttcggtgttgtggtgcttgaggtgctgatgggcaaa 18228638
Query: 3147 catcctgg 3154
||||||||
Sbjct: 18228639 catcctgg 18228646
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 227 acccgtgcaactggaccggcatcacctgcggcgac 261
|||||||||||||||| ||||||||||||||||||
Sbjct: 18225603 acccgtgcaactggactggcatcacctgcggcgac 18225637
Score = 54.0 bits (27), Expect = 0.003
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 569 aaatccctcctgccttgggtaatctctcaagacttgcctttctttatctccctgggaata 628
||||||||||||| |||||||| || ||| ||| | | ||||| ||||| ||| ||||
Sbjct: 18225948 aaatccctcctgcgttgggtaaccttacaaagcttacttatctttctctccttggcaata 18226007
Query: 629 ggctctcaggtaacatcccatggcaccttgg 659
||| || ||||||||||||||||| |||||
Sbjct: 18226008 agctgtccggtaacatcccatggcagcttgg 18226038
Score = 52.0 bits (26), Expect = 0.014
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1273 aaaacaaattgtctggaccaatccatcaaagttttgggaaattggagagcgtga 1326
||||| |||||||||| ||||||| || ||||| || ||||||||||||||||
Sbjct: 18226650 aaaaccaattgtctggtccaatccctccgagtttgggaaaattggagagcgtga 18226703
Score = 50.1 bits (25), Expect = 0.054
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1698 gcagacaacatgatagaaggtagtataccttctgagttggggatgctaaaaaatctt 1754
|||||||| |||||| |||| |||||||||||||| | |||| ||||||||||||
Sbjct: 18227075 gcagacaatatgataaaaggcggtataccttctgagcttgggaatctaaaaaatctt 18227131
Score = 44.1 bits (22), Expect = 3.4
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3102 gtatatagctttggtgttgtgg 3123
||||||||||||||||||||||
Sbjct: 5732925 gtatatagctttggtgttgtgg 5732946
>dbj|AP003202.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1075D06
Length = 130528
Score = 283 bits (143), Expect = 2e-72
Identities = 474/583 (81%), Gaps = 6/583 (1%)
Strand = Plus / Plus
Query: 2484 ttctctgtatggagctttgatggcagaatggcgtttgaggatattatcaatgcaactgac 2543
|||||||||||||| |||||||| | |||||| ||||| ||||| || | ||||| |||
Sbjct: 79303 ttctctgtatggagttttgatggtaaaatggcatttgatgatataattagcgcaaccgac 79362
Query: 2544 aattttgatgagaaacattgcattggagagggatcatacggcagtgtttataaagcagaa 2603
|||||||||||||| |||||||||||||||||| |||| || |||| || |||||||||
Sbjct: 79363 aattttgatgagaagcattgcattggagagggagcatatggtcgtgtatacaaagcagaa 79422
Query: 2604 cttcagagtaaagaagtggttgcagtaaagaaactacatgcagctgatgaagatgcag-- 2661
||| | ||| ||||| |||| || |||||||| ||| ||| |||||||||| | |
Sbjct: 79423 cttgaagataagcaagtgtttgcggtgaagaaactccatccagatgatgaagatactgta 79482
Query: 2662 -atgatgaagaaaggttccagcatgagattgaaatgttaacaaaaattcgccaacgcaac 2720
| |||||||| || || ||| ||||||||||||||| ||||||| || || || | |
Sbjct: 79483 cacgatgaagagagatttcagattgagattgaaatgttggcaaaaatccgacatcgtagc 79542
Query: 2721 atcgtcaagttgtatggatattgttctcatccgcggtacaggttccttgtatgtcagttt 2780
|| || ||||||||||||| |||| |||||| |||||||||| || || ||||| |
Sbjct: 79543 atagtgaagttgtatggattctgttgtcatccaaggtacaggtttctcgtttgtcaatac 79602
Query: 2781 atagagaaaggaaatctagcttctatcctaagcaatgaagaactagcaatccagttccat 2840
||||||| |||||| |||||||||||| ||| ||||||||| |||| ||| ||||| ||
Sbjct: 79603 atagagagaggaaacctagcttctatcttaaataatgaagaagtagccatcgagttctat 79662
Query: 2841 tggcaaagaaggacggctctcataagagatgtggctcaagccctcacttacctccatcat 2900
||| |||||||| | |||||||||||||| |||||||| | ||||| || ||||
Sbjct: 79663 tggatgagaaggacaaccctcataagagatgtagctcaagcaattacttatct---tcat 79719
Query: 2901 gatgttcacccgcccataattcatcgagacatcacaagcagaaacatcttactagatgct 2960
||| ||| || |||||||||||||| ||||| || ||| ||||||||||||| |||| |
Sbjct: 79720 gattgtcagcctcccataattcatcgtgacattacgagcggaaacatcttactggatgtt 79779
Query: 2961 gattacaaagcattcgtctcggacttcggtattgcgagaatgttaaaacctgattcgtcg 3020
||||| | ||||| |||||||| || || ||||| ||||| ||||||| ||||| ||
Sbjct: 79780 gattatagagcatatgtctcggattttggcattgcaagaattctaaaaccggattcatca 79839
Query: 3021 aattggagtgcactagcggggacctatggctacatagcacctg 3063
|||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 79840 aattggagtgcattagctgggacctatggctatatagcacctg 79882
Score = 115 bits (58), Expect = 1e-21
Identities = 154/186 (82%)
Strand = Plus / Plus
Query: 2118 atgtttgtaaacttctcacacaatcaattcagtggtgccatccctgtttcggttgcaagc 2177
|||| ||||||||| |||||||||||||| |||||||| ||||||| || |||||||
Sbjct: 78940 atgtatgtaaacttgtcacacaatcaatttagtggtgctatccctggctcaattgcaagt 78999
Query: 2178 atgcaaagcctaacaatatttgatgtatcatacaacttcctagaagggtctatcccaaaa 2237
|||||||| ||| || | |||||||| |||||||| |||| ||||| |||| || | |
Sbjct: 79000 atgcaaagtctatcagtgtttgatgtgtcatacaatgtcctcgaaggtcctattcctaga 79059
Query: 2238 gggattcacaatgcatcagcagaatggtttctccacaacaaagatctttgtggagacctt 2297
| | ||||||||||| ||| |||||||| |||||||||||| |||||||||||| |||
Sbjct: 79060 ccgctccacaatgcatcggcaaaatggtttgtccacaacaaaggtctttgtggagaactt 79119
Query: 2298 gttggc 2303
| ||||
Sbjct: 79120 gctggc 79125
Score = 87.7 bits (44), Expect = 2e-13
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3087 acggaaaaatgtgacgtatatagctttggtgttgtggcgcttgaggtgttaatggggaaa 3146
||||| |||||||||||||||||||| |||||||||| |||||||||| | ||||| |||
Sbjct: 80024 acggagaaatgtgacgtatatagcttcggtgttgtggtgcttgaggtgctgatgggcaaa 80083
Query: 3147 catcctgg 3154
||||||||
Sbjct: 80084 catcctgg 80091
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 227 acccgtgcaactggaccggcatcacctgcggcgac 261
|||||||||||||||| ||||||||||||||||||
Sbjct: 77048 acccgtgcaactggactggcatcacctgcggcgac 77082
Score = 54.0 bits (27), Expect = 0.003
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 569 aaatccctcctgccttgggtaatctctcaagacttgcctttctttatctccctgggaata 628
||||||||||||| |||||||| || ||| ||| | | ||||| ||||| ||| ||||
Sbjct: 77393 aaatccctcctgcgttgggtaaccttacaaagcttacttatctttctctccttggcaata 77452
Query: 629 ggctctcaggtaacatcccatggcaccttgg 659
||| || ||||||||||||||||| |||||
Sbjct: 77453 agctgtccggtaacatcccatggcagcttgg 77483
Score = 52.0 bits (26), Expect = 0.014
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1273 aaaacaaattgtctggaccaatccatcaaagttttgggaaattggagagcgtga 1326
||||| |||||||||| ||||||| || ||||| || ||||||||||||||||
Sbjct: 78095 aaaaccaattgtctggtccaatccctccgagtttgggaaaattggagagcgtga 78148
Score = 50.1 bits (25), Expect = 0.054
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1698 gcagacaacatgatagaaggtagtataccttctgagttggggatgctaaaaaatctt 1754
|||||||| |||||| |||| |||||||||||||| | |||| ||||||||||||
Sbjct: 78520 gcagacaatatgataaaaggcggtataccttctgagcttgggaatctaaaaaatctt 78576
>gb|M90688.1 |YSCPAN1A Saccharomyces cerevisiae PAB-dependent polyA ribonuclease (PAN1)
gene, complete cds
Length = 5050
Score = 44.1 bits (22), Expect = 3.4
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2648 tgatgaagatgcagatgatgaagaaa 2673
||||||||||| ||||||||||||||
Sbjct: 3858 tgatgaagatgaagatgatgaagaaa 3883
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 625,525,570
Number of extensions: 32587481
Number of successful extensions: 169022
Number of sequences better than 10.0: 31
Number of HSP's gapped: 169014
Number of HSP's successfully gapped: 78
Length of query: 3459
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3435
Effective length of database: 18,499,340,271
Effective search space: 63545233830885
Effective search space used: 63545233830885
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)