ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68m03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0364800:Os01g0364800 | 38 | 3e-04 | 2 | Os04g0517700:Os04g0517700 | 36 | 0.002 | 3 | Os04g0368800:Os04g0368800 | 32 | 0.47 | 4 | AK111989:Os10g0180800 | 31 | 0.80 | 5 | AK111815:Os10g0180800 | 31 | 0.80 | 6 | AK111809:Os10g0180800 | 31 | 0.80 | 7 | AK111496:Os10g0180800 | 31 | 0.80 | 8 | AK099018:Os10g0180800 | 31 | 0.80 | 9 | Os12g0606100:Os12g0606100 | 30 | 1.8 | 10 | AK067467:Os04g0286300 | 29 | 2.3 | 11 | AK100387:Os02g0111600 | 29 | 3.0 | 12 | AK101423:Os02g0760200 | 28 | 5.2 | 13 | AK121315:Os01g0702400 | 28 | 6.8 | 14 | AK111527:Os05g0188600 | 28 | 6.8 | 15 | AK101142:Os09g0555600 | 28 | 6.8 | 16 | AK070371:Os12g0165500 | 28 | 6.8 | 17 | AB159444:Os09g0555600 | 28 | 6.8 | 18 | AK121782:Os02g0523300 | 27 | 8.9 |
|---|
>Os01g0364800:Os01g0364800 | Length = 472 Score = 38.1 bits (87), Expect(2) = 3e-04 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 175 DVNECVESPSPCHGSATCHNTVG 243 DVNEC ++PSPC TC NT+G Sbjct: 11 DVNECEQNPSPCTKGETCRNTIG 33 Score = 23.1 bits (48), Expect(2) = 3e-04 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 254 SCPFVTSFAKETNSC 298 SCP A+ETN+C Sbjct: 41 SCPLGRKLARETNTC 55
>Os04g0517700:Os04g0517700 | Length = 843 Score = 36.2 bits (82), Expect(2) = 0.002 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 166 GVSDVNECVESPSPCHGSATCHNTVG 243 G DVNEC +P PC CHNT G Sbjct: 323 GCHDVNECDRNPWPCPSGGVCHNTEG 348 Score = 22.3 bits (46), Expect(2) = 0.002 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 233 TQLEFHCSCPFVTSFAKETNSC 298 T+ + CSC F+K +N+C Sbjct: 346 TEGGYRCSCRKGRKFSKSSNTC 367
>Os04g0368800:Os04g0368800 | Length = 766 Score = 31.6 bits (70), Expect = 0.47 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +1 Query: 166 GVSDVNECVESPSPCHGSATCHNTVG 243 G +D++EC + PC TCHN G Sbjct: 315 GCTDIDECADPKYPCSVPGTCHNLPG 340
>AK111989:Os10g0180800 | Length = 626 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 163 EGVSDVNECVESPSPCHGSATCHNTVG 243 +G D++EC E+P C G C NTVG Sbjct: 153 DGCEDIDECRETPGICKG--VCKNTVG 177
>AK111815:Os10g0180800 | Length = 993 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 163 EGVSDVNECVESPSPCHGSATCHNTVG 243 +G D++EC E+P C G C NTVG Sbjct: 520 DGCEDIDECRETPGICKG--VCKNTVG 544
>AK111809:Os10g0180800 | Length = 1051 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 163 EGVSDVNECVESPSPCHGSATCHNTVG 243 +G D++EC E+P C G C NTVG Sbjct: 578 DGCEDIDECRETPGICKG--VCKNTVG 602
>AK111496:Os10g0180800 | Length = 993 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 163 EGVSDVNECVESPSPCHGSATCHNTVG 243 +G D++EC E+P C G C NTVG Sbjct: 520 DGCEDIDECRETPGICKG--VCKNTVG 544
>AK099018:Os10g0180800 | Length = 993 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 163 EGVSDVNECVESPSPCHGSATCHNTVG 243 +G D++EC E+P C G C NTVG Sbjct: 520 DGCEDIDECRETPGICKG--VCKNTVG 544
>Os12g0606100:Os12g0606100 | Length = 1139 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -1 Query: 164 SNSSAGDTKKTTHISTPNSSPSSVGFQFDADDVVGREQHEHEL 36 S +S GDT TT+ + + GFQFD + + +E L Sbjct: 604 SGTSPGDTLSTTYFPRLDGTDYKFGFQFDDSEYIRQEDDRRTL 646
>AK067467:Os04g0286300 | Length = 918 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +1 Query: 166 GVSDVNECVESPSPCHGSATCHNTVG 243 G D++EC ++P C G CHN +G Sbjct: 452 GCEDIDECKKTPGICKG--ICHNDIG 475
>AK100387:Os02g0111600 | Length = 737 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 166 GVSDVNECVESPSPCHGSATCHNTVG 243 G D+NEC CHG C NT+G Sbjct: 292 GCQDINECESPGQYCHG--ICDNTIG 315
>AK101423:Os02g0760200 | Length = 1037 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 228 PQHSWSSIVHALLSPVLLRKQTPAPIS 308 P W ++VH LL PVL++ Q A +S Sbjct: 470 PTADWLNLVHDLLLPVLMKTQGTAALS 496
>AK121315:Os01g0702400 | Length = 901 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/36 (33%), Positives = 14/36 (38%) Frame = +2 Query: 257 CPFVTSFAKETNSCANQFISQDNGYEENQGAASTYC 364 C TS A+ET CA G+ N G C Sbjct: 73 CIMPTSLARETELCARSISWSQQGFSPNSGCLLAVC 108
>AK111527:Os05g0188600 | Length = 174 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +1 Query: 352 FYLLSQKGHKKKHTIQ*RINGLGPVLWSAMFTSSVAVEAENARKAVMQKNSQWYVLAHLL 531 F++LS H KK G+ P + S++ +S+ + +SQW+ L H+L Sbjct: 25 FFVLSILSHWKKENHL----GVSPFIHSSLVAASLHL-------LTSYFSSQWHELVHIL 73 Query: 532 SQAPHVD*F 558 P VD F Sbjct: 74 LAHPKVDIF 82
>AK101142:Os09g0555600 | Length = 740 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/87 (24%), Positives = 37/87 (42%) Frame = +2 Query: 218 LQLATTQLEFHCSCPFVTSFAKETNSCANQFISQDNGYEENQGAASTYCHKRVTKRNTLF 397 +Q A Q FHC PF+ K+ N+ I+ + E+ ++ + +RVT Sbjct: 267 IQSAIKQAVFHC--PFLRGGIKDLNNVVFLSITSSRIFSESDMVSTLHIFRRVTG----- 319 Query: 398 NRGLMV*DLSYGPQCSPPLLRWKPKML 478 D+ + C P L +PK++ Sbjct: 320 ----FTEDIIFSRNCEPDL---EPKLI 339
>AK070371:Os12g0165500 | Length = 116 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Frame = +3 Query: 411 WFRTCLMVRNVHLLCCGGSRK----C*KSSDAEELAVVCSCSLAITSPSC*LIFLVCN*I 578 +F CL NV C RK ++ + L+ CSCS T C L + Sbjct: 24 YFSDCLPALNV---CAKRPRKERYAGTTTAAMDTLSSDCSCSSLTTHAPCVLWISSMAAL 80 Query: 579 HVLNLFLSKGFNTFP 623 + LNL LS GF T P Sbjct: 81 NCLNLSLSTGFCTDP 95
>AB159444:Os09g0555600 | Length = 740 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/87 (24%), Positives = 37/87 (42%) Frame = +2 Query: 218 LQLATTQLEFHCSCPFVTSFAKETNSCANQFISQDNGYEENQGAASTYCHKRVTKRNTLF 397 +Q A Q FHC PF+ K+ N+ I+ + E+ ++ + +RVT Sbjct: 267 IQSAIKQAVFHC--PFLRGGIKDLNNVVFLSITSSRIFSESDMVSTLHIFRRVTG----- 319 Query: 398 NRGLMV*DLSYGPQCSPPLLRWKPKML 478 D+ + C P L +PK++ Sbjct: 320 ----FTEDIIFSRNCEPDL---EPKLI 339
>AK121782:Os02g0523300 | Length = 1029 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = -1 Query: 164 SNSSAGDTKKTTHISTPNSSPSSVGFQFDADDVVGREQHEHEL 36 S + GDT TT+ + + GFQFD + + +E L Sbjct: 578 SGTIPGDTLSTTYFPRLDGTDYKFGFQFDDSEYIRQEDDRRTL 620 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,563,196 Number of extensions: 393512 Number of successful extensions: 1120 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1118 Number of HSP's successfully gapped: 20 Length of query: 213 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 117 Effective length of database: 11,555,919 Effective search space: 1352042523 Effective search space used: 1352042523 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
