ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68m03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os01g26174:12001.t006927:unspliced-genomic OsWAK5 - OsWA... 39 3e-07
2LOC_Os01g26780:12001.t02361:unspliced-genomic wall-associate... 43 3e-06
3LOC_Os01g26280:12001.t02334:unspliced-genomic OsWAK8 - OsWAK... 43 1e-05
4LOC_Os04g43730:12004.t03913:unspliced-genomic OsWAK51 - OsWA... 39 4e-04
5LOC_Os07g33670:12007.t03045:unspliced-genomic patatin-like p... 37 0.11
6LOC_Os02g01540:12002.t00054:unspliced-genomic conserved hypo... 34 0.98
7LOC_Os12g41290:12012.t03806:unspliced-genomic transferase, t... 33 2.5
8LOC_Os04g30010:12004.t02688:unspliced-genomic OsWAK45 - OsWA... 33 2.5
9LOC_Os09g02750:12009.t00174:unspliced-genomic retrotransposo... 32 3.5
10LOC_Os03g62120:12003.t05439:unspliced-genomic dnaJ domain co... 32 3.5
11LOC_Os12g02180:12012.t00115:unspliced-genomic hypothetical p... 32 4.8
12LOC_Os11g02230:12011.t00117:unspliced-genomic hypothetical p... 32 4.8
13LOC_Os11g05770:12011.t00468:unspliced-genomic plant-specific... 31 6.6
14LOC_Os07g07630:12007.t00641:unspliced-genomic hypothetical p... 31 6.6
15LOC_Os06g39260:12006.t03624:unspliced-genomic solute carrier... 31 6.6
16LOC_Os06g05100:12006.t00399:unspliced-genomic 1-deoxy-D-xylu... 31 6.6
17LOC_Os02g53200:12002.t04899:unspliced-genomic glucan endo-1,... 31 6.6
18LOC_Os01g71300:12001.t06425:unspliced-genomic esterase D, pu... 31 6.6
19LOC_Os01g04360:12001.t00324:unspliced-genomic 16.9 kDa class... 31 6.6
20LOC_Os10g31610:12010.t02484:unspliced-genomic retrotransposo... 31 9.0
21LOC_Os06g34040:12006.t03100:unspliced-genomic 4-methyl-5-thi... 31 9.0
22LOC_Os02g52280:12002.t04809:unspliced-genomic expressed protein 31 9.0
23LOC_Os01g56800:12001.t05090:unspliced-genomic MATH domain co... 31 9.0
24LOC_Os01g44130:12001.t03924:unspliced-genomic aspartic prote... 31 9.0
25LOC_Os01g42480:12001.t03765:unspliced-genomic yip1 domain fa... 31 9.0
26LOC_Os01g03490:12001.t00240:unspliced-genomic heavy metal-as... 31 9.0
27LOC_Os11g03690:12011.t00260:unspliced-genomic pentatricopept... 28 9.4

>LOC_Os01g26174:12001.t006927:unspliced-genomic OsWAK5 - OsWAK receptor-like protein kinase, expressed|
          Length = 3124
 Score = 39.1 bits (79), Expect(2) = 3e-07
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1 / +1

                                   
Query: 175  DVNECVESPSPCHGSATCHNTVG 243
            DVNEC ++ SPC   ATC NT G
Sbjct: 1192 DVNECEQNQSPCPKGATCRNTEG 1260



 Score = 35.0 bits (70), Expect(2) = 3e-07
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2 / +1

                              
Query: 245  FHCSCPFVTSFAKETNSC 298
            +HCSCP     AKETN+C
Sbjct: 1264 YHCSCPVGRKLAKETNTC 1317



 Score = 30.9 bits (61), Expect(2) = 0.071
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -2 / -1

                                  
Query: 238  LCCGKLQSHGRGLDSPHIH*HL 173
            L C KL   G G D  HIH*HL
Sbjct: 1255 LYCDKLHLLGMGFDFAHIH*HL 1190



 Score = 24.4 bits (47), Expect(2) = 0.071
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3 / -3

                             
Query: 297  QEFVSLAKLVTKGHEQW 247
            Q FVS A  +  G EQW
Sbjct: 1316 QVFVSFANFLPTGQEQW 1266



 Score = 33.6 bits (67), Expect = 1.3
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3 / +3

                                 
Query: 174  RCQ*MCGESKPLPWLCNLPQH 236
            RCQ*M  +SKP+P  CNL Q+
Sbjct: 1191 RCQ*M*AKSKPMPKRCNLSQY 1253



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>LOC_Os01g26780:12001.t02361:unspliced-genomic wall-associated kinase 3, putative|
          Length = 3303

 Score = 43.2 bits (88), Expect(2) = 3e-06
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1 / +2

                                    
Query: 172  SDVNECVESPSPCHGSATCHNTVG 243
            +DVNEC ++  PC   ATCHNT+G
Sbjct: 1157 ADVNECDQNTGPCPKGATCHNTIG 1228



 Score = 27.2 bits (53), Expect(2) = 3e-06
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2 / +2

                              
Query: 245  FHCSCPFVTSFAKETNSC 298
            +HCSCP     A +++SC
Sbjct: 1232 YHCSCPPGRKLANDSSSC 1285



 Score = 34.5 bits (69), Expect = 0.71
 Identities = 15/24 (62%), Positives = 15/24 (62%)
 Frame = -2 / -2

                                    
Query: 244  LQLCCGKLQSHGRGLDSPHIH*HL 173
            L LCC KL   G GL   HIH*HL
Sbjct: 1229 LLLCCDKLHPLGMGLYFGHIH*HL 1158



 Score = 34.1 bits (68), Expect = 0.98
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +2 / +3

                                    
Query: 173  QMSMNVWRVQAPAMALQLATTQLE 244
            QMSMNV ++QA A  +QL TTQ E
Sbjct: 1158 QMSMNVTKIQAHAQRVQLVTTQ*E 1229



 Score = 30.9 bits (61), Expect = 9.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3 / +1

                                  
Query: 174  RCQ*MCGESKPLPWLCNLPQHS 239
            RCQ*M  + +P+P  CNL QH+
Sbjct: 1159 RCQ*M*PKYRPMPKGCNLSQHN 1224



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>LOC_Os01g26280:12001.t02334:unspliced-genomic OsWAK8 - OsWAK receptor-like protein kinase, expressed|
          Length = 2494

 Score = 43.2 bits (88), Expect(2) = 1e-05
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1 / +1

                                   
Query: 172 SDVNECVESPSPCHGSATCHNTVG 243
           +DVNEC ++PSPC    TC NT+G
Sbjct: 457 ADVNECEQNPSPCTKGETCRNTIG 528



 Score = 24.9 bits (48), Expect(2) = 1e-05
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2 / +1

                          
Query: 254 SCPFVTSFAKETNSC 298
           SCP     A+ETN+C
Sbjct: 550 SCPLGRKLARETNTC 594



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>LOC_Os04g43730:12004.t03913:unspliced-genomic OsWAK51 - OsWAK receptor-like protein kinase, expressed|
          Length = 3541

 Score = 39.1 bits (79), Expect(2) = 4e-04
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1 / +1

                                    
Query: 172  SDVNECVESPSPCHGSATCHNTVG 243
            +DVNEC  +P PC     CHNT G
Sbjct: 1912 TDVNECDRNPWPCPSGGVCHNTEG 1983



 Score = 24.0 bits (46), Expect(2) = 4e-04
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2 / +1

                                  
Query: 233  TQLEFHCSCPFVTSFAKETNSC 298
            T+  + CSC     F+K +N+C
Sbjct: 1975 TEGGYRCSCRKGRKFSKSSNTC 2040



 Score = 32.7 bits (65), Expect = 2.5
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1 / -3

                                   
Query: 242  PTVLWQVAEPWQGLGLSTHSLTS 174
            P+VLWQ      G GL +HSLTS
Sbjct: 1982 PSVLWQTPPEGHGHGLRSHSLTS 1914



 Score = 31.3 bits (62), Expect = 6.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2 / -1

                                       
Query: 253  TMELQLCCGKLQSHGRGLDSPHIH*HL 173
            T  L  CCGK    G  +   HIH*HL
Sbjct: 1993 TGSLLPCCGKHHRKGMAMGCDHIH*HL 1913



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>LOC_Os07g33670:12007.t03045:unspliced-genomic patatin-like phospholipase family protein, expressed|
          Length = 7435

 Score = 37.3 bits (75), Expect = 0.11
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3 / +1

                                
Query: 24  KIQPQLMLVLLPPHDVVCVEL 86
           ++Q QLM+ L PPHD VCV+L
Sbjct: 277 RLQSQLMVALPPPHDAVCVDL 339



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>LOC_Os02g01540:12002.t00054:unspliced-genomic conserved hypothetical protein|
          Length = 3870

 Score = 34.1 bits (68), Expect = 0.98
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1 / +2

                                          
Query: 148  PAEEFEGVSDVNECVESPSPCHGSATCHNT 237
            P   ++G+    + V SPSP   SA CHNT
Sbjct: 1178 PPSSWQGLWSGRDAVPSPSPATRSAMCHNT 1267



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>LOC_Os12g41290:12012.t03806:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed|
          Length = 6597

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1 / +3

                                                       
Query: 164  SNSSAGDTKKTTHISTPNSSPSSVGFQFDADDVVGREQHEHEL 36
            S +S GDT  TT+    + +    GFQFD  + + +E     L
Sbjct: 3987 SGTSPGDTLSTTYFPRLDGTDYKFGFQFDDSEYIRQEDDRRTL 4115



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>LOC_Os04g30010:12004.t02688:unspliced-genomic OsWAK45 - OsWAK receptor-like protein kinase, expressed|
          Length = 3706

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1 / +1

                                    
Query: 172  SDVNECVESPSPCHGSATCHNTVG 243
            +D++EC +   PC    TCHN  G
Sbjct: 1672 ADIDECADPKYPCSVPGTCHNLPG 1743



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>LOC_Os09g02750:12009.t00174:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3391

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3 / +3

                                        
Query: 6    RPSEPPKIQPQLMLVLLPPHDVVCVELK 89
            RP+ P    P +   L+PPHD+ C  ++
Sbjct: 2334 RPNHPD*SGPSIQAQLIPPHDLACTPIR 2417



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>LOC_Os03g62120:12003.t05439:unspliced-genomic dnaJ domain containing protein|
          Length = 2695

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1 / +3

                                    
Query: 263  KGMNNGTPTVLWQVAEPWQGLGLS 192
            +G+   T  V W V EPW+ LG S
Sbjct: 1269 RGVRTATEEVRWPVVEPWRSLGSS 1340



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>LOC_Os12g02180:12012.t00115:unspliced-genomic hypothetical protein|
          Length = 2547

 Score = 31.8 bits (63), Expect = 4.8
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1 / +2

                                                
Query: 203  LGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96
            LGLST  ++S T +  S   T +T   STP   PSS
Sbjct: 1769 LGLSTSPVSSATRAGCSLQTTGETPSSSTPTPPPSS 1876



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>LOC_Os11g02230:12011.t00117:unspliced-genomic hypothetical protein|
          Length = 1197

 Score = 31.8 bits (63), Expect = 4.8
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1 / +2

                                               
Query: 203 LGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96
           LGLST  ++S T +  S   T +T   STP   PSS
Sbjct: 254 LGLSTSPVSSATRAGCSLQTTGETPSSSTPTPPPSS 361



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>LOC_Os11g05770:12011.t00468:unspliced-genomic plant-specific domain TIGR01568 family protein, expressed|
          Length = 1457

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1 / +2

                                                   
Query: 215 PWQGLGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96
           PW+     T S       +SS+G +  T   +TP+SSP S
Sbjct: 716 PWRRWWRRTASAAGTPSRSSSSGTSASTASTTTPSSSPPS 835



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>LOC_Os07g07630:12007.t00641:unspliced-genomic hypothetical protein|
          Length = 1270

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1 / -2

                                                 
Query: 203  LGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSSV 93
            L LST ++ + TPS ++   T KT  IST  SS + V
Sbjct: 1095 LVLSTTTIRAITPSTTTVDTTNKTCIISTHRSSANQV 985



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>LOC_Os06g39260:12006.t03624:unspliced-genomic solute carrier family 35 member B1, putative, expressed|
          Length = 3394

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2 / +1

                           
Query: 227 ATTQLEFHCSCPFVTS 274
           + TQL F CSCPFV S
Sbjct: 706 SATQLRFGCSCPFVVS 753



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>LOC_Os06g05100:12006.t00399:unspliced-genomic 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor,|
           putative, expressed
          Length = 6068

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1 / -3

                                                        
Query: 230 WQVAEPWQGLGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96
           W++  P   +    H   + T + +S G  KKT + ST  SSP S
Sbjct: 297 WRIRRPKSVIPNLHHRQPASTRNRNSRGGQKKTKNPSTVTSSPPS 163



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>LOC_Os02g53200:12002.t04899:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed|
          Length = 3132

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1 / +1

                                            
Query: 194 STHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96
           ST   ++ TP+ S+ G    TT  STP+S+P S
Sbjct: 823 STTRCSAPTPACSTPGAASSTTASSTPSSTPCS 921



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>LOC_Os01g71300:12001.t06425:unspliced-genomic esterase D, putative, expressed|
          Length = 21094

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +3 / -3

                                    
Query: 165   RSFRCQ*MCGESKPLPWLCNLPQ 233
             RS R Q  CGESK LP  C  PQ
Sbjct: 20603 RSGRIQVACGESKELPQPCTPPQ 20535



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>LOC_Os01g04360:12001.t00324:unspliced-genomic 16.9 kDa class I heat shock protein 3, putative, expressed|
          Length = 789

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1 / +1

                                           
Query: 194 STHSLTSETPSNSSAGDTKKTTHISTPNSSPS 99
           ST SLTS TPS +S+  + +    +TP  SP+
Sbjct: 142 STPSLTSGTPSTASSAPSSRRPPTATPPLSPT 237



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>LOC_Os10g31610:12010.t02484:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3704

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2 / -2

                                   
Query: 446  PPLLRWKPKMLEKQ*CRRTRSGM 514
            PPLL WKP  +    CRR R  M
Sbjct: 1534 PPLLVWKPSSVSSCNCRRRRDHM 1466



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>LOC_Os06g34040:12006.t03100:unspliced-genomic 4-methyl-5-thiazole monophosphate biosynthesis protein, putative,|
            expressed
          Length = 5137

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2 / -2

                                       
Query: 355  RSCTLILLISIVLTYKLIGAGVCFLSK 275
            + CTLI L  I  T K   AG CF+S+
Sbjct: 1536 KECTLICLAKIAGTIKFEMAGACFISQ 1456



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>LOC_Os02g52280:12002.t04809:unspliced-genomic expressed protein|
          Length = 9057

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3 / +1

                                       
Query: 228  PQHSWSSIVHALLSPVLLRKQTPAPIS 308
            P   W ++VH LL PVL++ Q  A +S
Sbjct: 4762 PTADWLNLVHDLLLPVLMKTQGTAALS 4842



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>LOC_Os01g56800:12001.t05090:unspliced-genomic MATH domain containing protein, expressed|
          Length = 10847

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2 / -3

                                                              
Query: 143  YLPLKSLKEFQMSMNVWRVQAPAMALQLATTQLEFHCSCPFVTSFAKETN 292
            +L    LK FQ S  + ++     AL+  T   +  CSC +  +  KET+
Sbjct: 3228 FLFFSPLKSFQFSKYIAQINLKV*ALR*LTEISQMKCSCNYSITIKKETS 3079



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>LOC_Os01g44130:12001.t03924:unspliced-genomic aspartic proteinase oryzasin-1 precursor, putative, expressed|
          Length = 6735

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1 / -2

                               
Query: 337  ESRCSFYLLSQKGHKKKHT 393
            ESRC    +S KGHKKK T
Sbjct: 1631 ESRCGD*FMSNKGHKKKQT 1575



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>LOC_Os01g42480:12001.t03765:unspliced-genomic yip1 domain family, member 1, putative, expressed|
          Length = 3119

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1 / -3

                                                  
Query: 266 QKGMNNGTPTVLWQVAEPWQGLGLSTHSLTSETPSNSSA 150
           ++G   G  ++  ++  PW   G S+H  TS +P+ ++A
Sbjct: 216 RRGRGRGRGSLPGRIRRPWGRRGRSSHRQTSSSPATATA 100



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>LOC_Os01g03490:12001.t00240:unspliced-genomic heavy metal-associated domain containing protein, expressed|
          Length = 2400

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3 / +3

                                     
Query: 204  PLPWLCNLPQHSWSSIVHALLSPVL 278
            P PW  N   HSW S +H L  PVL
Sbjct: 1620 PQPWPRNSRCHSWFSGLHRLQPPVL 1694



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>LOC_Os11g03690:12011.t00260:unspliced-genomic pentatricopeptide repeat-containing protein, putative, expressed|
          Length = 1931

 Score = 27.6 bits (54), Expect(2) = 9.4
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2 / +2

                                                
Query: 431 GPQCSPPLLRWKPKMLEKQ*CRRTRSGMFLLTCYHKP 541
           G +CSPP   + P M      RR  S   L  CY  P
Sbjct: 632 GTRCSPPTRAFVPGMWPAPPLRRMLSSRCLCGCYP*P 742



 Score = 23.5 bits (45), Expect(2) = 9.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2 / +1

                               
Query: 188 VWRVQAPAMALQLATTQLEF 247
           ++R   PA+AL LAT  ++F
Sbjct: 442 LFRAAPPALALALATHSIKF 501


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 258,572,225
Number of extensions: 4205085
Number of successful extensions: 15894
Number of sequences better than 10.0: 27
Length of query: 213
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 165
Effective length of database: 52,912,542
Effective search space: 8730569430
Effective search space used: 8730569430
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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