| Clone Name | FLbaf68m03 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g26174:12001.t006927:unspliced-genomic OsWAK5 - OsWAK receptor-like protein kinase, expressed| Length = 3124 Score = 39.1 bits (79), Expect(2) = 3e-07 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 / +1 Query: 175 DVNECVESPSPCHGSATCHNTVG 243 DVNEC ++ SPC ATC NT G Sbjct: 1192 DVNECEQNQSPCPKGATCRNTEG 1260 Score = 35.0 bits (70), Expect(2) = 3e-07 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +2 / +1 Query: 245 FHCSCPFVTSFAKETNSC 298 +HCSCP AKETN+C Sbjct: 1264 YHCSCPVGRKLAKETNTC 1317 Score = 30.9 bits (61), Expect(2) = 0.071 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = -2 / -1 Query: 238 LCCGKLQSHGRGLDSPHIH*HL 173 L C KL G G D HIH*HL Sbjct: 1255 LYCDKLHLLGMGFDFAHIH*HL 1190 Score = 24.4 bits (47), Expect(2) = 0.071 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -3 / -3 Query: 297 QEFVSLAKLVTKGHEQW 247 Q FVS A + G EQW Sbjct: 1316 QVFVSFANFLPTGQEQW 1266 Score = 33.6 bits (67), Expect = 1.3 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +3 / +3 Query: 174 RCQ*MCGESKPLPWLCNLPQH 236 RCQ*M +SKP+P CNL Q+ Sbjct: 1191 RCQ*M*AKSKPMPKRCNLSQY 1253
>LOC_Os01g26780:12001.t02361:unspliced-genomic wall-associated kinase 3, putative| Length = 3303 Score = 43.2 bits (88), Expect(2) = 3e-06 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +1 / +2 Query: 172 SDVNECVESPSPCHGSATCHNTVG 243 +DVNEC ++ PC ATCHNT+G Sbjct: 1157 ADVNECDQNTGPCPKGATCHNTIG 1228 Score = 27.2 bits (53), Expect(2) = 3e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 / +2 Query: 245 FHCSCPFVTSFAKETNSC 298 +HCSCP A +++SC Sbjct: 1232 YHCSCPPGRKLANDSSSC 1285 Score = 34.5 bits (69), Expect = 0.71 Identities = 15/24 (62%), Positives = 15/24 (62%) Frame = -2 / -2 Query: 244 LQLCCGKLQSHGRGLDSPHIH*HL 173 L LCC KL G GL HIH*HL Sbjct: 1229 LLLCCDKLHPLGMGLYFGHIH*HL 1158 Score = 34.1 bits (68), Expect = 0.98 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = +2 / +3 Query: 173 QMSMNVWRVQAPAMALQLATTQLE 244 QMSMNV ++QA A +QL TTQ E Sbjct: 1158 QMSMNVTKIQAHAQRVQLVTTQ*E 1229 Score = 30.9 bits (61), Expect = 9.0 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 / +1 Query: 174 RCQ*MCGESKPLPWLCNLPQHS 239 RCQ*M + +P+P CNL QH+ Sbjct: 1159 RCQ*M*PKYRPMPKGCNLSQHN 1224
>LOC_Os01g26280:12001.t02334:unspliced-genomic OsWAK8 - OsWAK receptor-like protein kinase, expressed| Length = 2494 Score = 43.2 bits (88), Expect(2) = 1e-05 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +1 / +1 Query: 172 SDVNECVESPSPCHGSATCHNTVG 243 +DVNEC ++PSPC TC NT+G Sbjct: 457 ADVNECEQNPSPCTKGETCRNTIG 528 Score = 24.9 bits (48), Expect(2) = 1e-05 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 254 SCPFVTSFAKETNSC 298 SCP A+ETN+C Sbjct: 550 SCPLGRKLARETNTC 594
>LOC_Os04g43730:12004.t03913:unspliced-genomic OsWAK51 - OsWAK receptor-like protein kinase, expressed| Length = 3541 Score = 39.1 bits (79), Expect(2) = 4e-04 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / +1 Query: 172 SDVNECVESPSPCHGSATCHNTVG 243 +DVNEC +P PC CHNT G Sbjct: 1912 TDVNECDRNPWPCPSGGVCHNTEG 1983 Score = 24.0 bits (46), Expect(2) = 4e-04 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 / +1 Query: 233 TQLEFHCSCPFVTSFAKETNSC 298 T+ + CSC F+K +N+C Sbjct: 1975 TEGGYRCSCRKGRKFSKSSNTC 2040 Score = 32.7 bits (65), Expect = 2.5 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 / -3 Query: 242 PTVLWQVAEPWQGLGLSTHSLTS 174 P+VLWQ G GL +HSLTS Sbjct: 1982 PSVLWQTPPEGHGHGLRSHSLTS 1914 Score = 31.3 bits (62), Expect = 6.6 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 / -1 Query: 253 TMELQLCCGKLQSHGRGLDSPHIH*HL 173 T L CCGK G + HIH*HL Sbjct: 1993 TGSLLPCCGKHHRKGMAMGCDHIH*HL 1913
>LOC_Os07g33670:12007.t03045:unspliced-genomic patatin-like phospholipase family protein, expressed| Length = 7435 Score = 37.3 bits (75), Expect = 0.11 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +3 / +1 Query: 24 KIQPQLMLVLLPPHDVVCVEL 86 ++Q QLM+ L PPHD VCV+L Sbjct: 277 RLQSQLMVALPPPHDAVCVDL 339
>LOC_Os02g01540:12002.t00054:unspliced-genomic conserved hypothetical protein| Length = 3870 Score = 34.1 bits (68), Expect = 0.98 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 / +2 Query: 148 PAEEFEGVSDVNECVESPSPCHGSATCHNT 237 P ++G+ + V SPSP SA CHNT Sbjct: 1178 PPSSWQGLWSGRDAVPSPSPATRSAMCHNT 1267
>LOC_Os12g41290:12012.t03806:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed| Length = 6597 Score = 32.7 bits (65), Expect = 2.5 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -1 / +3 Query: 164 SNSSAGDTKKTTHISTPNSSPSSVGFQFDADDVVGREQHEHEL 36 S +S GDT TT+ + + GFQFD + + +E L Sbjct: 3987 SGTSPGDTLSTTYFPRLDGTDYKFGFQFDDSEYIRQEDDRRTL 4115
>LOC_Os04g30010:12004.t02688:unspliced-genomic OsWAK45 - OsWAK receptor-like protein kinase, expressed| Length = 3706 Score = 32.7 bits (65), Expect = 2.5 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 / +1 Query: 172 SDVNECVESPSPCHGSATCHNTVG 243 +D++EC + PC TCHN G Sbjct: 1672 ADIDECADPKYPCSVPGTCHNLPG 1743
>LOC_Os09g02750:12009.t00174:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3391 Score = 32.2 bits (64), Expect = 3.5 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +3 / +3 Query: 6 RPSEPPKIQPQLMLVLLPPHDVVCVELK 89 RP+ P P + L+PPHD+ C ++ Sbjct: 2334 RPNHPD*SGPSIQAQLIPPHDLACTPIR 2417
>LOC_Os03g62120:12003.t05439:unspliced-genomic dnaJ domain containing protein| Length = 2695 Score = 32.2 bits (64), Expect = 3.5 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -1 / +3 Query: 263 KGMNNGTPTVLWQVAEPWQGLGLS 192 +G+ T V W V EPW+ LG S Sbjct: 1269 RGVRTATEEVRWPVVEPWRSLGSS 1340
>LOC_Os12g02180:12012.t00115:unspliced-genomic hypothetical protein| Length = 2547 Score = 31.8 bits (63), Expect = 4.8 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -1 / +2 Query: 203 LGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96 LGLST ++S T + S T +T STP PSS Sbjct: 1769 LGLSTSPVSSATRAGCSLQTTGETPSSSTPTPPPSS 1876
>LOC_Os11g02230:12011.t00117:unspliced-genomic hypothetical protein| Length = 1197 Score = 31.8 bits (63), Expect = 4.8 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -1 / +2 Query: 203 LGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96 LGLST ++S T + S T +T STP PSS Sbjct: 254 LGLSTSPVSSATRAGCSLQTTGETPSSSTPTPPPSS 361
>LOC_Os11g05770:12011.t00468:unspliced-genomic plant-specific domain TIGR01568 family protein, expressed| Length = 1457 Score = 31.3 bits (62), Expect = 6.6 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 / +2 Query: 215 PWQGLGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96 PW+ T S +SS+G + T +TP+SSP S Sbjct: 716 PWRRWWRRTASAAGTPSRSSSSGTSASTASTTTPSSSPPS 835
>LOC_Os07g07630:12007.t00641:unspliced-genomic hypothetical protein| Length = 1270 Score = 31.3 bits (62), Expect = 6.6 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 / -2 Query: 203 LGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSSV 93 L LST ++ + TPS ++ T KT IST SS + V Sbjct: 1095 LVLSTTTIRAITPSTTTVDTTNKTCIISTHRSSANQV 985
>LOC_Os06g39260:12006.t03624:unspliced-genomic solute carrier family 35 member B1, putative, expressed| Length = 3394 Score = 31.3 bits (62), Expect = 6.6 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +2 / +1 Query: 227 ATTQLEFHCSCPFVTS 274 + TQL F CSCPFV S Sbjct: 706 SATQLRFGCSCPFVVS 753
>LOC_Os06g05100:12006.t00399:unspliced-genomic 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor,| putative, expressed Length = 6068 Score = 31.3 bits (62), Expect = 6.6 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -1 / -3 Query: 230 WQVAEPWQGLGLSTHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96 W++ P + H + T + +S G KKT + ST SSP S Sbjct: 297 WRIRRPKSVIPNLHHRQPASTRNRNSRGGQKKTKNPSTVTSSPPS 163
>LOC_Os02g53200:12002.t04899:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 3132 Score = 31.3 bits (62), Expect = 6.6 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 / +1 Query: 194 STHSLTSETPSNSSAGDTKKTTHISTPNSSPSS 96 ST ++ TP+ S+ G TT STP+S+P S Sbjct: 823 STTRCSAPTPACSTPGAASSTTASSTPSSTPCS 921
>LOC_Os01g71300:12001.t06425:unspliced-genomic esterase D, putative, expressed| Length = 21094 Score = 31.3 bits (62), Expect = 6.6 Identities = 14/23 (60%), Positives = 14/23 (60%) Frame = +3 / -3 Query: 165 RSFRCQ*MCGESKPLPWLCNLPQ 233 RS R Q CGESK LP C PQ Sbjct: 20603 RSGRIQVACGESKELPQPCTPPQ 20535
>LOC_Os01g04360:12001.t00324:unspliced-genomic 16.9 kDa class I heat shock protein 3, putative, expressed| Length = 789 Score = 31.3 bits (62), Expect = 6.6 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 / +1 Query: 194 STHSLTSETPSNSSAGDTKKTTHISTPNSSPS 99 ST SLTS TPS +S+ + + +TP SP+ Sbjct: 142 STPSLTSGTPSTASSAPSSRRPPTATPPLSPT 237
>LOC_Os10g31610:12010.t02484:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3704 Score = 30.9 bits (61), Expect = 9.0 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 / -2 Query: 446 PPLLRWKPKMLEKQ*CRRTRSGM 514 PPLL WKP + CRR R M Sbjct: 1534 PPLLVWKPSSVSSCNCRRRRDHM 1466
>LOC_Os06g34040:12006.t03100:unspliced-genomic 4-methyl-5-thiazole monophosphate biosynthesis protein, putative,| expressed Length = 5137 Score = 30.9 bits (61), Expect = 9.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -2 Query: 355 RSCTLILLISIVLTYKLIGAGVCFLSK 275 + CTLI L I T K AG CF+S+ Sbjct: 1536 KECTLICLAKIAGTIKFEMAGACFISQ 1456
>LOC_Os02g52280:12002.t04809:unspliced-genomic expressed protein| Length = 9057 Score = 30.9 bits (61), Expect = 9.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 / +1 Query: 228 PQHSWSSIVHALLSPVLLRKQTPAPIS 308 P W ++VH LL PVL++ Q A +S Sbjct: 4762 PTADWLNLVHDLLLPVLMKTQGTAALS 4842
>LOC_Os01g56800:12001.t05090:unspliced-genomic MATH domain containing protein, expressed| Length = 10847 Score = 30.9 bits (61), Expect = 9.0 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 / -3 Query: 143 YLPLKSLKEFQMSMNVWRVQAPAMALQLATTQLEFHCSCPFVTSFAKETN 292 +L LK FQ S + ++ AL+ T + CSC + + KET+ Sbjct: 3228 FLFFSPLKSFQFSKYIAQINLKV*ALR*LTEISQMKCSCNYSITIKKETS 3079
>LOC_Os01g44130:12001.t03924:unspliced-genomic aspartic proteinase oryzasin-1 precursor, putative, expressed| Length = 6735 Score = 30.9 bits (61), Expect = 9.0 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 / -2 Query: 337 ESRCSFYLLSQKGHKKKHT 393 ESRC +S KGHKKK T Sbjct: 1631 ESRCGD*FMSNKGHKKKQT 1575
>LOC_Os01g42480:12001.t03765:unspliced-genomic yip1 domain family, member 1, putative, expressed| Length = 3119 Score = 30.9 bits (61), Expect = 9.0 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = -1 / -3 Query: 266 QKGMNNGTPTVLWQVAEPWQGLGLSTHSLTSETPSNSSA 150 ++G G ++ ++ PW G S+H TS +P+ ++A Sbjct: 216 RRGRGRGRGSLPGRIRRPWGRRGRSSHRQTSSSPATATA 100
>LOC_Os01g03490:12001.t00240:unspliced-genomic heavy metal-associated domain containing protein, expressed| Length = 2400 Score = 30.9 bits (61), Expect = 9.0 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +3 / +3 Query: 204 PLPWLCNLPQHSWSSIVHALLSPVL 278 P PW N HSW S +H L PVL Sbjct: 1620 PQPWPRNSRCHSWFSGLHRLQPPVL 1694
>LOC_Os11g03690:12011.t00260:unspliced-genomic pentatricopeptide repeat-containing protein, putative, expressed| Length = 1931 Score = 27.6 bits (54), Expect(2) = 9.4 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 / +2 Query: 431 GPQCSPPLLRWKPKMLEKQ*CRRTRSGMFLLTCYHKP 541 G +CSPP + P M RR S L CY P Sbjct: 632 GTRCSPPTRAFVPGMWPAPPLRRMLSSRCLCGCYP*P 742 Score = 23.5 bits (45), Expect(2) = 9.4 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +2 / +1 Query: 188 VWRVQAPAMALQLATTQLEF 247 ++R PA+AL LAT ++F Sbjct: 442 LFRAAPPALALALATHSIKF 501 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 258,572,225 Number of extensions: 4205085 Number of successful extensions: 15894 Number of sequences better than 10.0: 27 Length of query: 213 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 165 Effective length of database: 52,912,542 Effective search space: 8730569430 Effective search space used: 8730569430 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)