ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65o16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os05g0517800:Os05g0517800 | 96 | 2e-20 | 2 | AK120740:Os03g0733000 | 55 | 3e-08 | 3 | AK064018:Os08g0500200 | 31 | 0.49 | 4 | AK107339:Os05g0137000 | 30 | 0.63 | 5 | AK102187:Os06g0247800 | 30 | 0.63 | 6 | AK066983:Os10g0447400 | 30 | 0.63 | 7 | AK120878:Os10g0553800 | 30 | 1.1 | 8 | AK110445: | 29 | 1.4 | 9 | AK111019:Os01g0166200 | 29 | 1.8 | 10 | AK119611:Os04g0539500 | 28 | 2.4 | 11 | AK099144:Os04g0539500 | 28 | 2.4 | 12 | AK072350:Os02g0729300 | 28 | 2.4 | 13 | AK065493:Os07g0693900 | 28 | 2.4 | 14 | AK060574:Os04g0539500 | 28 | 2.4 | 15 | Os08g0242000:Os08g0242000 | 27 | 5.4 | 16 | AK110134: | 27 | 5.4 | 17 | AK065979:Os09g0490200 | 27 | 6.9 | 18 | AK065473:Os09g0490200 | 27 | 6.9 | 19 | AK072124:Os02g0641800 | 27 | 7.0 |
|---|
>Os05g0517800:Os05g0517800 | Length = 77 Score = 95.5 bits (236), Expect = 2e-20 Identities = 50/76 (65%), Positives = 57/76 (75%), Gaps = 1/76 (1%) Frame = +2 Query: 110 MALTNLILTVVGVGAAVMLLRKDVKQSSAVFRRNIRHIKTWL-XXXXXXXXXXXRSVPKE 286 MALTN ILTVVGVG AV+LLR DVKQS+++FRRN+RHI+ WL R+ PKE Sbjct: 1 MALTNFILTVVGVGTAVLLLRSDVKQSASIFRRNVRHIRKWLEEESAAAAKPAERAAPKE 60 Query: 287 LESQAAKKDSTPKVDK 334 LESQAAKKD TPK DK Sbjct: 61 LESQAAKKDVTPKDDK 76
>AK120740:Os03g0733000 | Length = 76 Score = 54.7 bits (130), Expect = 3e-08 Identities = 24/42 (57%), Positives = 31/42 (73%) Frame = +2 Query: 110 MALTNLILTVVGVGAAVMLLRKDVKQSSAVFRRNIRHIKTWL 235 MALTN +LTV VGAA +L D+++S A+FRRN R I+ WL Sbjct: 1 MALTNFVLTVAAVGAAALLFTTDIRKSGAMFRRNARQIRAWL 42
>AK064018:Os08g0500200 | Length = 513 Score = 30.8 bits (68), Expect = 0.49 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 13/75 (17%) Frame = -1 Query: 199 DGGRLLHVLPQQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGS-------------S 59 D R H P H+ AY + D RHRRP N ++ GS Sbjct: 352 DDRRGRHYTPSDHNS---AYPKHDSSDSRHRRPEYGRGNSTSELGSEGQRRQESQQGRNG 408 Query: 58 PEFGARKGLLTASEQ 14 P F R+G+ SE+ Sbjct: 409 PTFNRRRGVQHMSEE 423
>AK107339:Os05g0137000 | Length = 201 Score = 30.4 bits (67), Expect = 0.63 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 172 PQQHHRRAHAYNRQDQVGQRHRRP-TNSPQNPSARRGSSPEFGARK 38 P+QH RR A ++Q +RH P T P+ S R ++ G R+ Sbjct: 86 PEQHQRRVRAVREREQPVERHAPPATILPRRSSHRLAAAAAAGRRR 131
>AK102187:Os06g0247800 | Length = 911 Score = 30.4 bits (67), Expect = 0.63 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = -1 Query: 175 LPQQH-----HRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSPEFGARK 38 +P QH RR R+D++ R + P +R SSP+ G+ K Sbjct: 494 VPPQHFIRLVQRRMERQRREDELKNRSSKKPQDADQPMGKRASSPQTGSEK 544
>AK066983:Os10g0447400 | Length = 239 Score = 30.4 bits (67), Expect = 0.63 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 9/50 (18%) Frame = -1 Query: 202 EDGGRLL----HVLPQQ-----HHRRAHAYNRQDQVGQRHRRPTNSPQNP 80 EDG RLL H Q HH R + RQ QV ++ R P +SP +P Sbjct: 168 EDGHRLLLRYRHDRQAQRPFLHHHERVLRHQRQRQVRRQVRTPASSPDSP 217
>AK120878:Os10g0553800 | Length = 482 Score = 29.6 bits (65), Expect = 1.1 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = +2 Query: 47 PKLRRRSTPRARVLRRVCWAAMALTNLILTVVGVGAAVMLLRKDVKQ---SSAVFRRNIR 217 P L +S ++ R AM +L L VVG GAA ++ +++++ S VF R Sbjct: 14 PPLPSKSQQKSEAKSRTHRLAMPSPSLRLAVVGAGAAGLVAARELRREGHSPVVFERAAS 73 Query: 218 HIKTWL 235 TWL Sbjct: 74 VGGTWL 79
>AK110445: | Length = 151 Score = 29.3 bits (64), Expect = 1.4 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +3 Query: 273 RYPRSWSPRLPRRIPHPKWTRIR*FYTSSTRRNC 374 ++P W P PR+ PHP R R + +R C Sbjct: 113 QWPVRWQPPAPRQRPHPSAERPRDVRAAPPKRRC 146
>AK111019:Os01g0166200 | Length = 124 Score = 28.9 bits (63), Expect = 1.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 20 RRRQQALSRPKLRRRSTPRARVLRRVCWAAM 112 RRR +A++RP+ RRR RA V W + Sbjct: 44 RRRAEAVARPRRRRRGGGRASVACEPSWVGL 74
>AK119611:Os04g0539500 | Length = 427 Score = 28.5 bits (62), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 181 HVLPQQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSPEFGARK 38 H+LP + H N +++ +R R+P P +PS S+P G R+ Sbjct: 295 HLLPPGKKSK-HGKNGKNKPKKRGRKPKQLPPHPSGAAASAPAPGDRR 341
>AK099144:Os04g0539500 | Length = 390 Score = 28.5 bits (62), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 181 HVLPQQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSPEFGARK 38 H+LP + H N +++ +R R+P P +PS S+P G R+ Sbjct: 258 HLLPPGKKSK-HGKNGKNKPKKRGRKPKQLPPHPSGAAASAPAPGDRR 304
>AK072350:Os02g0729300 | Length = 469 Score = 28.5 bits (62), Expect = 2.4 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -1 Query: 160 HRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSP 56 HR+A + R R+P SPQN S R+ S+P Sbjct: 286 HRQASTPSPSLPRATRPRQPRQSPQNTSCRQASTP 320
>AK065493:Os07g0693900 | Length = 1245 Score = 28.5 bits (62), Expect = 2.4 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = -1 Query: 223 DVANVATEDGGRLLHVLPQQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSS 59 D+ N A EDG R + Q HH + H N ++ V +SP N SA G+S Sbjct: 341 DIDN-APEDGDRSNKRIRQSHHDQEHTENVKNNVELTSADTPSSPSN-SASTGNS 393
>AK060574:Os04g0539500 | Length = 390 Score = 28.5 bits (62), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 181 HVLPQQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSPEFGARK 38 H+LP + H N +++ +R R+P P +PS S+P G R+ Sbjct: 258 HLLPPGKKSK-HGKNGKNKPKKRGRKPKQLPPHPSGAAASAPAPGDRR 304
>Os08g0242000:Os08g0242000 | Length = 573 Score = 27.3 bits (59), Expect = 5.4 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -1 Query: 133 QDQVGQRHRRPTNSPQNPSARRGSSPEFGARKG 35 +++ G RH R P P ARRG + G +G Sbjct: 476 REEQGARHNRQVRRPGPPVARRGEAGGAGEEEG 508
>AK110134: | Length = 944 Score = 27.3 bits (59), Expect = 5.4 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = -1 Query: 169 QQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSPEFG 47 QQ ++ +Q Q Q+ ++ PQ P G+S +FG Sbjct: 73 QQQQQQQQQQQQQQQQQQQQQQQQQHPQQPQWASGTSQDFG 113
>AK065979:Os09g0490200 | Length = 611 Score = 26.9 bits (58), Expect = 6.9 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -3 Query: 296 GTPAPWVPIAQQMWW 252 GTP PW P + WW Sbjct: 202 GTPPPWWPSGNEDWW 216
>AK065473:Os09g0490200 | Length = 565 Score = 26.9 bits (58), Expect = 6.9 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -3 Query: 296 GTPAPWVPIAQQMWW 252 GTP PW P + WW Sbjct: 202 GTPPPWWPSGNEDWW 216
>AK072124:Os02g0641800 | Length = 508 Score = 26.9 bits (58), Expect = 7.0 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = -1 Query: 172 PQQHHRRAHAYNRQDQVGQRHRRPTNSPQNPSARRGSSPE 53 PQQHH H Q Q Q RR + + R S P+ Sbjct: 53 PQQHHHHNHHQQHQQQQQQWLRRNQIAREAAGTDRNSEPK 92 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,178,083 Number of extensions: 278364 Number of successful extensions: 1163 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1154 Number of HSP's successfully gapped: 19 Length of query: 163 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 70 Effective length of database: 11,676,042 Effective search space: 817322940 Effective search space used: 817322940 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
