ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf65o16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK241866.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 143 7e-31
2ref|NM_001062589.1| Oryza sativa (japonica cultivar-group) Os05g... 137 4e-29
3gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.46
6gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 d... 44 0.46
7ref|NM_129533.3| Arabidopsis thaliana unknown protein (AT2G39750... 42 1.8
8gb|BT019100.1| Zea mays clone Contig701.F mRNA sequence 42 1.8
9gb|AY124857.1| Arabidopsis thaliana At2g39750/T5I7.5 mRNA, compl... 42 1.8
10gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ... 42 1.8
11gb|AY053416.1| Arabidopsis thaliana At2g39750/T5I7.5 mRNA, compl... 42 1.8
12emb|BX819232.1|CNS0A9VY Arabidopsis thaliana Full-length cDNA Co... 42 1.8
13emb|BX820296.1|CNS0A832 Arabidopsis thaliana Full-length cDNA Co... 42 1.8
14ref|XM_314262.2| Anopheles gambiae str. PEST ENSANGP00000018736 ... 42 1.8
15ref|XM_001015069.1| Tetrahymena thermophila SB210 ATPase, histid... 40 7.1
16gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 40 7.1
17gb|AC146307.24| Medicago truncatula chromosome 6 clone mth2-9p17... 40 7.1
18gb|AC191647.3| Gallus gallus BAC clone CH261-169J1 from chromoso... 40 7.1
19gb|AE014298.4| Drosophila melanogaster chromosome X, complete se... 40 7.1
20gb|BC046249.1| Homo sapiens cDNA clone IMAGE:6062938, **** WARNI... 40 7.1
21ref|NM_004587.2| Homo sapiens ribosome binding protein 1 homolog... 40 7.1
22ref|NM_001042576.1| Homo sapiens ribosome binding protein 1 homo... 40 7.1
23ref|XM_991888.1| PREDICTED: Mus musculus ribosome binding protei... 40 7.1
24ref|XM_622097.3| PREDICTED: Mus musculus ribosome binding protei... 40 7.1
25ref|XM_918338.2| PREDICTED: Mus musculus ribosome binding protei... 40 7.1
26gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome... 40 7.1
27gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, co... 40 7.1
28gb|BC080526.1| Homo sapiens ribosome binding protein 1 homolog 1... 40 7.1
29gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, com... 40 7.1
30gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, comp... 40 7.1
31gb|BC020482.1| Homo sapiens ribosome binding protein 1 homolog 1... 40 7.1
32gb|BC000099.2| Homo sapiens ribosome binding protein 1 homolog 1... 40 7.1
33ref|NM_167164.2| Drosophila melanogaster Calmodulin-binding prot... 40 7.1
34ref|NM_080341.2| Drosophila melanogaster Calmodulin-binding prot... 40 7.1
35dbj|AB226215.1| Aspergillus oryzae cDNA, contig sequence: AoEST3074 40 7.1
36dbj|AP007172.1| Aspergillus oryzae RIB40 genomic DNA, SC206 40 7.1
37gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.1
38dbj|AK019964.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 7.1
39gb|AY094962.1| Drosophila melanogaster SD04240 full insert cDNA 40 7.1
40emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462... 40 7.1
41emb|Y17918.1|DME17918 Drosophila melanogaster mRNA for CRAG protein 40 7.1
42emb|AL833822.1|HSM805097 Homo sapiens mRNA; cDNA DKFZp586A1420 (... 40 7.1
43emb|AL954376.4| Mouse DNA sequence from clone RP23-245P22 on chr... 40 7.1
44gb|AC023743.4| Drosophila melanogaster X BAC RP98-40O10 (Roswell... 40 7.1
45dbj|AK129349.1| Mus musculus mRNA for mKIAA1398 protein 40 7.1
46ref|XM_954672.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
47emb|AL929550.7| Mouse DNA sequence from clone RP23-77A2 on chrom... 40 7.1
48gb|AC067937.1|AC067937 Neurospora crassa chromosome 7, clone X11... 40 7.1
49gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 7.1
50emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 7.1
51ref|XM_316674.2| Anopheles gambiae str. PEST ENSANGP00000011311 ... 40 7.1
52gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.1
53gb|AF006751.1|AF006751 Homo sapiens ES/130 mRNA, complete cds 40 7.1
54emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chro... 40 7.1
55emb|CR974485.12| Mouse DNA sequence from clone RP23-112H14 on ch... 40 7.1
56emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on ch... 40 7.1
57dbj|AB037819.2| Homo sapiens mRNA for KIAA1398 protein, partial cds 40 7.1 
>dbj|AK241866.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065217I20,
           full insert sequence
          Length = 3188
 Score =  143 bits (72), Expect = 7e-31
 Identities = 173/206 (83%), Gaps = 3/206 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgatggcgttgaccaacctgatcctgacggttgtaggcgtgggcgcggcggtgatgctg 166
           ||||||||| |||||||| | ||||||||||| || ||||||||| |||||||| |||||
Sbjct: 78  gcgatggcgctgaccaacttcatcctgacggtggtgggcgtgggcacggcggtgctgctg 137

                                                                       
Query: 167 ctgcggaaggacgtgaagcagtcgtccgccgtcttccgtcgcaacattcgccacatcaag 226
           |||||||  ||||||||||||||| |  || ||||||| |||||| | |||||||||   
Sbjct: 138 ctgcggagcgacgtgaagcagtcggcgtccatcttccgccgcaacgtccgccacatccgc 197

                                                                       
Query: 227 acctggctcgaggaggagtccgccgccaccac---atctgctgagcgatcggtacccaag 283
           |  |||||||||||||||||||||||| || |   | ||||||||||  | | ||| |||
Sbjct: 198 aagtggctcgaggaggagtccgccgccgccgccaaacctgctgagcgggctgcacctaag 257

                                     
Query: 284 gagctggagtcccaggctgccaagaa 309
           |||||||||||||||||||| |||||
Sbjct: 258 gagctggagtcccaggctgcaaagaa 283
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>ref|NM_001062589.1| Oryza sativa (japonica cultivar-group) Os05g0517800 (Os05g0517800)
           mRNA, complete cds
          Length = 234

 Score =  137 bits (69), Expect = 4e-29
 Identities = 170/203 (83%), Gaps = 3/203 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 atggcgttgaccaacctgatcctgacggttgtaggcgtgggcgcggcggtgatgctgctg 169
           |||||| |||||||| | ||||||||||| || ||||||||| |||||||| ||||||||
Sbjct: 1   atggcgctgaccaacttcatcctgacggtggtgggcgtgggcacggcggtgctgctgctg 60

                                                                       
Query: 170 cggaaggacgtgaagcagtcgtccgccgtcttccgtcgcaacattcgccacatcaagacc 229
           ||||  ||||||||||||||| |  || ||||||| |||||| | |||||||||   |  
Sbjct: 61  cggagcgacgtgaagcagtcggcgtccatcttccgccgcaacgtccgccacatccgcaag 120

                                                                       
Query: 230 tggctcgaggaggagtccgccgccaccac---atctgctgagcgatcggtacccaaggag 286
           |||||||||||||||||||||||| || |   | ||||||||||  | | ||| ||||||
Sbjct: 121 tggctcgaggaggagtccgccgccgccgccaaacctgctgagcgggctgcacctaaggag 180

                                  
Query: 287 ctggagtcccaggctgccaagaa 309
           ||||||||||||||||| |||||
Sbjct: 181 ctggagtcccaggctgcaaagaa 203
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>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
              complete sequence
          Length = 143073

 Score =  125 bits (63), Expect = 2e-25
 Identities = 126/147 (85%)
 Strand = Plus / Plus

                                                                          
Query: 107    gcgatggcgttgaccaacctgatcctgacggttgtaggcgtgggcgcggcggtgatgctg 166
              ||||||||| |||||||| | ||||||||||| || ||||||||| |||||||| |||||
Sbjct: 103160 gcgatggcgctgaccaacttcatcctgacggtggtgggcgtgggcacggcggtgctgctg 103219

                                                                          
Query: 167    ctgcggaaggacgtgaagcagtcgtccgccgtcttccgtcgcaacattcgccacatcaag 226
              |||||||  ||||||||||||||| |  || ||||||| |||||| | |||||||||   
Sbjct: 103220 ctgcggagcgacgtgaagcagtcggcgtccatcttccgccgcaacgtccgccacatccgc 103279

                                         
Query: 227    acctggctcgaggaggagtccgccgcc 253
              |  ||||||||||||||||||||||||
Sbjct: 103280 aagtggctcgaggaggagtccgccgcc 103306



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 281    aaggagctggagtcccaggctgccaagaa 309
              ||||||||||||||||||||||| |||||
Sbjct: 105320 aaggagctggagtcccaggctgcaaagaa 105348
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  125 bits (63), Expect = 2e-25
 Identities = 126/147 (85%)
 Strand = Plus / Plus

                                                                            
Query: 107      gcgatggcgttgaccaacctgatcctgacggttgtaggcgtgggcgcggcggtgatgctg 166
                ||||||||| |||||||| | ||||||||||| || ||||||||| |||||||| |||||
Sbjct: 25462799 gcgatggcgctgaccaacttcatcctgacggtggtgggcgtgggcacggcggtgctgctg 25462858

                                                                            
Query: 167      ctgcggaaggacgtgaagcagtcgtccgccgtcttccgtcgcaacattcgccacatcaag 226
                |||||||  ||||||||||||||| |  || ||||||| |||||| | |||||||||   
Sbjct: 25462859 ctgcggagcgacgtgaagcagtcggcgtccatcttccgccgcaacgtccgccacatccgc 25462918

                                           
Query: 227      acctggctcgaggaggagtccgccgcc 253
                |  ||||||||||||||||||||||||
Sbjct: 25462919 aagtggctcgaggaggagtccgccgcc 25462945



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 281      aaggagctggagtcccaggctgccaagaa 309
                ||||||||||||||||||||||| |||||
Sbjct: 25464959 aaggagctggagtcccaggctgcaaagaa 25464987
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 148     gggcgcggcggtgatgctgctg 169
               ||||||||||||||||||||||
Sbjct: 2754970 gggcgcggcggtgatgctgctg 2754949
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>gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing
           CBF1-like protein mRNA, complete cds
          Length = 717

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 235 cgaggaggagtccgccgccacc 256
           ||||||||||||||||||||||
Sbjct: 513 cgaggaggagtccgccgccacc 534
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>ref|NM_129533.3| Arabidopsis thaliana unknown protein (AT2G39750) mRNA, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 439  aatattggaatcaaataattggggg 463
            ||||||||||| |||||||||||||
Sbjct: 1703 aatattggaatgaaataattggggg 1727
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>gb|BT019100.1| Zea mays clone Contig701.F mRNA sequence
          Length = 948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 281 aaggagctggagtcccaggctgccaagaa 309
           |||||| |||||||||| |||||||||||
Sbjct: 385 aaggagttggagtcccaagctgccaagaa 357
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>gb|AY124857.1| Arabidopsis thaliana At2g39750/T5I7.5 mRNA, complete cds
          Length = 2085

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 439  aatattggaatcaaataattggggg 463
            ||||||||||| |||||||||||||
Sbjct: 1580 aatattggaatgaaataattggggg 1604
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>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 439   aatattggaatcaaataattggggg 463
             ||||||||||| |||||||||||||
Sbjct: 22424 aatattggaatgaaataattggggg 22400
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>gb|AY053416.1| Arabidopsis thaliana At2g39750/T5I7.5 mRNA, complete cds
          Length = 2269

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 439  aatattggaatcaaataattggggg 463
            ||||||||||| |||||||||||||
Sbjct: 1626 aatattggaatgaaataattggggg 1650
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>emb|BX819232.1|CNS0A9VY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB59ZH01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 915

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 439 aatattggaatcaaataattggggg 463
           ||||||||||| |||||||||||||
Sbjct: 275 aatattggaatgaaataattggggg 299
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>emb|BX820296.1|CNS0A832 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZD05 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2328

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 439  aatattggaatcaaataattggggg 463
            ||||||||||| |||||||||||||
Sbjct: 1703 aatattggaatgaaataattggggg 1727
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>ref|XM_314262.2| Anopheles gambiae str. PEST ENSANGP00000018736
           (ENSANGG00000016247), partial mRNA
          Length = 694

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 144 gcgtgggcgcggcggtgatgctgct 168
           |||||||||||| ||||||||||||
Sbjct: 313 gcgtgggcgcggtggtgatgctgct 337
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>ref|XM_001015069.1| Tetrahymena thermophila SB210 ATPase, histidine kinase-, DNA gyrase
            B-, and HSP90-like domain containing protein
            (TTHERM_00717470) mRNA, complete cds
          Length = 3402

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  aagatgtttggtaggatctt 428
            ||||||||||||||||||||
Sbjct: 1019 aagatgtttggtaggatctt 1038
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>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      cggcgacgatccacgcctcg 75
               ||||||||||||||||||||
Sbjct: 1756924 cggcgacgatccacgcctcg 1756943
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>gb|AC146307.24| Medicago truncatula chromosome 6 clone mth2-9p17, complete sequence
          Length = 120805

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    taaagaatattggaatcaaa 453
              ||||||||||||||||||||
Sbjct: 102409 taaagaatattggaatcaaa 102428
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>gb|AC191647.3| Gallus gallus BAC clone CH261-169J1 from chromosome z, complete sequence
          Length = 217166

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    accacatctgctgagcgatc 273
              ||||||||||||||||||||
Sbjct: 145758 accacatctgctgagcgatc 145739
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>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence
          Length = 22422827

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 235     cgaggaggagtccgccgcca 254
               ||||||||||||||||||||
Sbjct: 8491496 cgaggaggagtccgccgcca 8491515
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>gb|BC046249.1| Homo sapiens cDNA clone IMAGE:6062938, **** WARNING: chimeric clone
            ****
          Length = 5161

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 2125 caaggagctggagtcccagg 2144
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>ref|NM_004587.2| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog) (RRBP1),
            transcript variant 2, mRNA
          Length = 3715

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 1945 caaggagctggagtcccagg 1964
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>ref|NM_001042576.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog) (RRBP1),
            transcript variant 1, mRNA
          Length = 3792

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 2022 caaggagctggagtcccagg 2041
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>ref|XM_991888.1| PREDICTED: Mus musculus ribosome binding protein 1 (Rrbp1), mRNA
          Length = 5431

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 3684 caaggagctggagtcccagg 3703
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>ref|XM_622097.3| PREDICTED: Mus musculus ribosome binding protein 1, transcript
            variant 1 (Rrbp1), mRNA
          Length = 5443

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 3696 caaggagctggagtcccagg 3715
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>ref|XM_918338.2| PREDICTED: Mus musculus ribosome binding protein 1, transcript
            variant 5 (Rrbp1), mRNA
          Length = 5371

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 3621 caaggagctggagtcccagg 3640
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>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence
          Length = 193364

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 277    acccaaggagctggagtcccaggc 300
              ||||| ||||||||||||||||||
Sbjct: 101313 acccatggagctggagtcccaggc 101290
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>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence
          Length = 190317

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 277   acccaaggagctggagtcccaggc 300
             ||||| ||||||||||||||||||
Sbjct: 69199 acccatggagctggagtcccaggc 69222
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>gb|BC080526.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA
           (cDNA clone IMAGE:4561660)
          Length = 1951

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 caaggagctggagtcccagg 299
           ||||||||||||||||||||
Sbjct: 829 caaggagctggagtcccagg 848
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>gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, complete sequence
          Length = 210390

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    agtatttgtaaatagaagatgttt 417
              ||||||||||||||||| ||||||
Sbjct: 167397 agtatttgtaaatagaaaatgttt 167420
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>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence
          Length = 357655

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   tgggcgcggcggtgatgctg 166
             ||||||||||||||||||||
Sbjct: 22851 tgggcgcggcggtgatgctg 22870
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>gb|BC020482.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA
           (cDNA clone IMAGE:3919185)
          Length = 1638

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 caaggagctggagtcccagg 299
           ||||||||||||||||||||
Sbjct: 970 caaggagctggagtcccagg 989
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>gb|BC000099.2| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA
           (cDNA clone IMAGE:3509994), partial cds
          Length = 2069

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 caaggagctggagtcccagg 299
           ||||||||||||||||||||
Sbjct: 703 caaggagctggagtcccagg 722
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>ref|NM_167164.2| Drosophila melanogaster Calmodulin-binding protein related to a Rab3
            GDP/GTP exchange protein CG12737-RB, transcript variant B
            (Crag), mRNA
          Length = 6078

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cgaggaggagtccgccgcca 254
            ||||||||||||||||||||
Sbjct: 3840 cgaggaggagtccgccgcca 3859
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>ref|NM_080341.2| Drosophila melanogaster Calmodulin-binding protein related to a Rab3
            GDP/GTP exchange protein CG12737-RA, transcript variant A
            (Crag), mRNA
          Length = 6159

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cgaggaggagtccgccgcca 254
            ||||||||||||||||||||
Sbjct: 3840 cgaggaggagtccgccgcca 3859
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>dbj|AB226215.1| Aspergillus oryzae cDNA, contig sequence: AoEST3074
          Length = 1236

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 cgaggaggagtccgccgcca 254
           ||||||||||||||||||||
Sbjct: 807 cgaggaggagtccgccgcca 826
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>dbj|AP007172.1| Aspergillus oryzae RIB40 genomic DNA, SC206
          Length = 343979

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    cgaggaggagtccgccgcca 254
              ||||||||||||||||||||
Sbjct: 110833 cgaggaggagtccgccgcca 110814
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     cgacgccgtcagcaggccct 39
              ||||||||||||||||||||
Sbjct: 756011 cgacgccgtcagcaggccct 755992



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 152     gcggcggtgatgctgctgcg 171
               ||||||||||||||||||||
Sbjct: 4411783 gcggcggtgatgctgctgcg 4411764
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>dbj|AK019964.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730465C04 product:ribosome
            binding protein 1, full insert sequence
          Length = 3110

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 1363 caaggagctggagtcccagg 1382
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>gb|AY094962.1| Drosophila melanogaster SD04240 full insert cDNA
          Length = 4424

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cgaggaggagtccgccgcca 254
            ||||||||||||||||||||
Sbjct: 2130 cgaggaggagtccgccgcca 2149
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>emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462D18 on chromosome 20 Contains the
             5' end of the BFSP1 gene for beaded filament structural
             protein 1 (filensin), the DSTN gene for destrin (actin
             depolymerizing factor ADF),  a ras-like pseudogene, the
             RRBP1 gene for ribosome binding protein 1 (dog 180 kDa
             homolog), the 5' end of the C20orf179 gene for chromosome
             20 open reading frame 179 and two CpG islands, complete
             sequence
          Length = 166001

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   caaggagctggagtcccagg 299
             ||||||||||||||||||||
Sbjct: 71955 caaggagctggagtcccagg 71936
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>emb|Y17918.1|DME17918 Drosophila melanogaster mRNA for CRAG protein
          Length = 5473

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cgaggaggagtccgccgcca 254
            ||||||||||||||||||||
Sbjct: 3612 cgaggaggagtccgccgcca 3631
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>emb|AL833822.1|HSM805097 Homo sapiens mRNA; cDNA DKFZp586A1420 (from clone DKFZp586A1420)
          Length = 2400

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 1733 caaggagctggagtcccagg 1752
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>emb|AL954376.4| Mouse DNA sequence from clone RP23-245P22 on chromosome 4 Contains part
             of the Ptprd gene for receptor type protein tyrosine
             phosphatase D, complete sequence
          Length = 163394

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   ttgtaaatagaagatgtttg 418
             ||||||||||||||||||||
Sbjct: 30114 ttgtaaatagaagatgtttg 30133
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>gb|AC023743.4| Drosophila melanogaster X BAC RP98-40O10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185405

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cgaggaggagtccgccgcca 254
             ||||||||||||||||||||
Sbjct: 65141 cgaggaggagtccgccgcca 65160
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>dbj|AK129349.1| Mus musculus mRNA for mKIAA1398 protein
          Length = 2911

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 1162 caaggagctggagtcccagg 1181
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>ref|XM_954672.1| Neurospora crassa OR74A hypothetical protein (NCU02339.1) partial
           mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 tccgccgtcttccgtcgcaa 210
           ||||||||||||||||||||
Sbjct: 909 tccgccgtcttccgtcgcaa 890
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>emb|AL929550.7| Mouse DNA sequence from clone RP23-77A2 on chromosome 2, complete
             sequence
          Length = 80734

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   caaggagctggagtcccagg 299
             ||||||||||||||||||||
Sbjct: 18237 caaggagctggagtcccagg 18218
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>gb|AC067937.1|AC067937 Neurospora crassa chromosome 7, clone X11-G8, complete sequence
          Length = 43556

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   tccgccgtcttccgtcgcaa 210
             ||||||||||||||||||||
Sbjct: 40761 tccgccgtcttccgtcgcaa 40780
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>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  tccgccgtcttccgtcgcaa 210
            ||||||||||||||||||||
Sbjct: 2264 tccgccgtcttccgtcgcaa 2283
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>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   tccgccgtcttccgtcgcaa 210
             ||||||||||||||||||||
Sbjct: 36468 tccgccgtcttccgtcgcaa 36487
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>ref|XM_316674.2| Anopheles gambiae str. PEST ENSANGP00000011311
           (ENSANGG00000008822), partial mRNA
          Length = 1557

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 gttgaccaacctgatcctga 134
           ||||||||||||||||||||
Sbjct: 837 gttgaccaacctgatcctga 856
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     tgggcggcgatggcgttgac 120
               ||||||||||||||||||||
Sbjct: 3956095 tgggcggcgatggcgttgac 3956114
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>gb|AF006751.1|AF006751 Homo sapiens ES/130 mRNA, complete cds
          Length = 3106

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 1738 caaggagctggagtcccagg 1757
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>emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chromosome 2, complete
              sequence
          Length = 221723

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gtacccaaggagctggagtc 294
              ||||||||||||||||||||
Sbjct: 119502 gtacccaaggagctggagtc 119483
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>emb|CR974485.12| Mouse DNA sequence from clone RP23-112H14 on chromosome 12, complete
              sequence
          Length = 219570

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    ctcatgtagtatttgtaaat 406
              ||||||||||||||||||||
Sbjct: 205973 ctcatgtagtatttgtaaat 205992
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>emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on chromosome X, complete
             sequence
          Length = 187669

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   tcatgtagtatttgtaaata 407
             ||||||||||||||||||||
Sbjct: 64249 tcatgtagtatttgtaaata 64268
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>dbj|AB037819.2| Homo sapiens mRNA for KIAA1398 protein, partial cds
          Length = 5468

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  caaggagctggagtcccagg 299
            ||||||||||||||||||||
Sbjct: 3701 caaggagctggagtcccagg 3720


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 78,652,004
Number of extensions: 4138910
Number of successful extensions: 379178
Number of sequences better than 10.0: 57
Number of HSP's gapped: 379174
Number of HSP's successfully gapped: 60
Length of query: 490
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 468
Effective length of database: 18,508,616,841
Effective search space: 8662032681588
Effective search space used: 8662032681588
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 13 (26.3 bits)
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