ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65n23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os06g0251000:Os06g0251000 | 676 | 0.0 | 2 | AK101016:Os02g0506500 | 45 | 2e-04 | 3 | AK063549:Os02g0506500 | 45 | 2e-04 | 4 | AK062572:Os02g0506500 | 45 | 2e-04 | 5 | AK111781:Os11g0106400 | 40 | 0.006 | 6 | AK120683:Os07g0586500 | 36 | 0.070 | 7 | AK110124: | 33 | 0.46 | 8 | AK101384:Os01g0271500 | 33 | 0.60 | 9 | AK074007:Os07g0692900 | 33 | 0.60 | 10 | AK062561:Os01g0271500 | 33 | 0.60 | 11 | AK120544:Os03g0294900 | 32 | 1.7 | 12 | Os03g0145000:Os03g0145000 | 31 | 2.3 | 13 | AK102537:Os01g0259400 | 29 | 8.6 |
|---|
>Os06g0251000:Os06g0251000 | Length = 477 Score = 676 bits (1745), Expect = 0.0 Identities = 354/445 (79%), Positives = 376/445 (84%), Gaps = 21/445 (4%) Frame = +2 Query: 53 AKRREGYVRKLLESNXXXXXXXXXXA--RLHASSDLLSDEVVAEQLTRNIQFFGVQSQKK 226 +KRREGYVR LLESN R+ A+SDLL DEVV+EQLTRNIQFFG++SQKK Sbjct: 33 SKRREGYVRSLLESNGVASGGAGSSVGTRVVATSDLLDDEVVSEQLTRNIQFFGMESQKK 92 Query: 227 VTESFVVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDVGTPKAS 406 VT SFVVVIGLGGVGSHAA DFDQVSLSSLNRHAVATR+DVGTPKA Sbjct: 93 VTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRDDVGTPKAL 152 Query: 407 CPKKHFSLIYPECQIEARVQLYDSSAEDEILSGQPDFVLDCIDNIDTKVSLLAACVRRGL 586 C KKHFS+IYPECQIEA+VQLYD S EDEILSGQPDFVLDCIDNIDTKV+LLAACVRRGL Sbjct: 153 CLKKHFSMIYPECQIEAKVQLYDPSCEDEILSGQPDFVLDCIDNIDTKVALLAACVRRGL 212 Query: 587 RVLSAMGAGARADPTRIRVADLRESSNDPLSRAVRHRLKKDHGIEGGIPVVFSMEKPKAK 766 RVLSAMGAGARADPTRIRVADLRESSNDPLSRAVR+RLKKDHGIEGGIPVVFS+EKPKAK Sbjct: 213 RVLSAMGAGARADPTRIRVADLRESSNDPLSRAVRYRLKKDHGIEGGIPVVFSLEKPKAK 272 Query: 767 LLPFQGSKEEETPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAQFDFQTEPIV 946 LLPFQ SKEEETPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYV+TQLA+ DFQTEPIV Sbjct: 273 LLPFQASKEEETPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVITQLAKLDFQTEPIV 332 Query: 947 NLDLDHYRVXXXXXXXXXXXIYGSAEQVLVDAEEVMYIVKELWRGRSARDQNMKDTGRKM 1126 N+DLDHYR+ IYGSAEQVLVDAEEVMYIVKELWRGRSARDQN+KDTGRKM Sbjct: 333 NMDLDHYRILHHRLLEHEELIYGSAEQVLVDAEEVMYIVKELWRGRSARDQNLKDTGRKM 392 Query: 1127 WRSVNELMLVRWDKTKPAGVSNLILLKFSE-------------------ADAHESTTLDQ 1249 WRSVNELMLVRWDK+KPAGVSNLILLKF+E ADAHESTTLDQ Sbjct: 393 WRSVNELMLVRWDKSKPAGVSNLILLKFNETPDNGKLTSNISGHAFLRGADAHESTTLDQ 452 Query: 1250 LKDEEPEFYAMVSRVLKRAETEFAL 1324 +K+EEPEFY MVSRVLK+AE EFAL Sbjct: 453 IKEEEPEFYNMVSRVLKQAEAEFAL 477
>AK101016:Os02g0506500 | Length = 421 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Frame = +2 Query: 209 VQSQKKVTESFVVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDV 388 V + +++ + + ++G+GGVGS AA D+D V L+++NR + V Sbjct: 71 VDNYERIRDYSIAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNR-LFFRPDQV 129 Query: 389 GTPKASCPKKHFSLIYPECQIEA---------RVQLYDSSAEDEILSGQ---PDFVLDCI 532 G K + S I P+ +E+ + + S + G+ D VL C+ Sbjct: 130 GMTKTDAAVQTLSGINPDVTLESYSLNITTVKGFETFLGSLKARSSDGRNTGVDLVLSCV 189 Query: 533 DNIDTKVSLLAACVRRG 583 DN + ++ + AC G Sbjct: 190 DNYEARMVVNQACNELG 206
>AK063549:Os02g0506500 | Length = 396 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Frame = +2 Query: 209 VQSQKKVTESFVVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDV 388 V + +++ + + ++G+GGVGS AA D+D V L+++NR + V Sbjct: 71 VDNYERIRDYSIAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNR-LFFRPDQV 129 Query: 389 GTPKASCPKKHFSLIYPECQIEA---------RVQLYDSSAEDEILSGQ---PDFVLDCI 532 G K + S I P+ +E+ + + S + G+ D VL C+ Sbjct: 130 GMTKTDAAVQTLSGINPDVTLESYSLNITTVKGFETFLGSLKARSSDGRNTGVDLVLSCV 189 Query: 533 DNIDTKVSLLAACVRRG 583 DN + ++ + AC G Sbjct: 190 DNYEARMVVNQACNELG 206
>AK062572:Os02g0506500 | Length = 401 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Frame = +2 Query: 209 VQSQKKVTESFVVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDV 388 V + +++ + + ++G+GGVGS AA D+D V L+++NR + V Sbjct: 51 VDNYERIRDYSIAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNR-LFFRPDQV 109 Query: 389 GTPKASCPKKHFSLIYPECQIEA---------RVQLYDSSAEDEILSGQ---PDFVLDCI 532 G K + S I P+ +E+ + + S + G+ D VL C+ Sbjct: 110 GMTKTDAAVQTLSGINPDVTLESYSLNITTVKGFETFLGSLKARSSDGRNTGVDLVLSCV 169 Query: 533 DNIDTKVSLLAACVRRG 583 DN + ++ + AC G Sbjct: 170 DNYEARMVVNQACNELG 186
>AK111781:Os11g0106400 | Length = 1048 Score = 39.7 bits (91), Expect = 0.006 Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 11/171 (6%) Frame = +2 Query: 194 IQFFGVQSQKKVTESFVVVIGLGGVGSH-----AAXXXXXXXXXXXXXXDFDQVSLSSLN 358 I FG QKK+ ++ + ++G G +G A D D + S+L+ Sbjct: 447 ISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLIVTDDDVIEKSNLS 506 Query: 359 RHAVATREDVGTPKASCPKKHFSLIYPECQIEA---RVQLYDSSAEDEILSGQPDFVLDC 529 R + ++G PK++ I P+ +EA R + ++ D V++ Sbjct: 507 RQFLFRDWNIGQPKSTVAATAAMAINPKLHVEALQNRASPETENVFNDAFWESLDAVVNA 566 Query: 530 IDNIDTKVSLLAACVRRGLRVLSAMGAGARADPTRIRVADLRE---SSNDP 673 +DN+ ++ + + CV +L + GA+ + T++ + L E +S DP Sbjct: 567 LDNVTARMYIDSRCVYFQKPLLESGTLGAKCN-TQMVIPHLTENYGASRDP 616
>AK120683:Os07g0586500 | Length = 406 Score = 36.2 bits (82), Expect = 0.070 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 1/120 (0%) Frame = +2 Query: 218 QKKVTESFVVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDVGTP 397 ++ V + V+++G GG+G D D + +S+LNR + + VG Sbjct: 12 EEAVKAAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQS 71 Query: 398 KASCPKKHFSLIYPECQIEA-RVQLYDSSAEDEILSGQPDFVLDCIDNIDTKVSLLAACV 574 KA + P I + + D+ E Q + VL+ +DN+D + + C+ Sbjct: 72 KAHVARDAVLKFRPNINITSYHANVKDAQFNVEFFK-QFNVVLNGLDNLDARRHVNRLCL 130
>AK110124: | Length = 831 Score = 33.5 bits (75), Expect = 0.46 Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 13/178 (7%) Frame = +2 Query: 194 IQFFGVQSQKKVTESFVVVIGLGGVGSH-----AAXXXXXXXXXXXXXXDFDQVSLSSLN 358 I G Q K+ + ++G G +G + D D + S+LN Sbjct: 233 IAVLGRTFQSKIANARQFLVGSGAIGCEMLKNWSMMGLGSGPDGIIHVTDMDTIEKSNLN 292 Query: 359 RHAVATREDVGTPKASCPKKHFSLIYPECQIEARVQLYDSSAEDEILSGQPDF-----VL 523 R + +DVG KA + + P+ + + E E + G F V Sbjct: 293 RQFLFRSKDVGHFKADTAAAAVAEMNPDLKGKIHSHQNRVGPETEDVYGDEFFASLTGVT 352 Query: 524 DCIDNIDTKVSLLAACVRRGLRVLSAMGAGARADPTRIRVADLRE---SSNDPLSRAV 688 + +DN+ + + CV +L + G +A+ T++ V L E SS DP +++ Sbjct: 353 NALDNVQARQYMDRRCVYYEKPLLESGTLGTKAN-TQVVVPHLTESYSSSQDPPEKSI 409
>AK101384:Os01g0271500 | Length = 451 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = +2 Query: 242 VVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDVGTPKASCPKK 418 V+V+G GG+G D D + +S+LNR + +DVG KA K Sbjct: 49 VLVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDVGKSKAEVAAK 107
>AK074007:Os07g0692900 | Length = 1045 Score = 33.1 bits (74), Expect = 0.60 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 12/172 (6%) Frame = +2 Query: 194 IQFFGVQSQKKVTESFVVVIGLGGVGSH-----AAXXXXXXXXXXXXXXDFDQVSLSSLN 358 I FG + QKK+ E+ V+G G +G A D D + S+L+ Sbjct: 444 ISVFGSKLQKKLEEANTFVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLS 503 Query: 359 RHAVATREDVGTPKASCPKKHFSLIYPECQIEARVQLYDSSAE----DEILSGQPDFVLD 526 R + ++ K++ S I P I+A E D G D V++ Sbjct: 504 RQFLFRDWNIRQAKSTVAAAAASAINPNLCIDALQNRACPDTENVFHDTFWEGL-DVVIN 562 Query: 527 CIDNIDTKVSLLAACVRRGLRVLSAMGAGARADPTRIRVADLRE---SSNDP 673 +DN++ ++ + C+ +L + GA+ + T++ + L E +S DP Sbjct: 563 ALDNVNARMYMDMRCLYFQKALLESGTLGAKCN-TQMVIPHLTENYGASRDP 613
>AK062561:Os01g0271500 | Length = 451 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = +2 Query: 242 VVVIGLGGVGSHAAXXXXXXXXXXXXXXDFDQVSLSSLNRHAVATREDVGTPKASCPKK 418 V+V+G GG+G D D + +S+LNR + +DVG KA K Sbjct: 49 VLVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDVGKSKAEVAAK 107
>AK120544:Os03g0294900 | Length = 1064 Score = 31.6 bits (70), Expect = 1.7 Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 12/172 (6%) Frame = +2 Query: 194 IQFFGVQSQKKVTESFVVVIGLGGVGSH-----AAXXXXXXXXXXXXXXDFDQVSLSSLN 358 I FG + QKK+ ++ V V+G G +G A D D + S+L+ Sbjct: 463 ISVFGSKLQKKMRDANVFVVGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIEKSNLS 522 Query: 359 RHAVATREDVGTPKASCPKKHFSLIYPECQIEARVQLYDSSAE----DEILSGQPDFVLD 526 R + ++G K++ S I I A E D+ G D +++ Sbjct: 523 RQFLFRDWNIGQAKSTVAAAAASAINSSLHINALQNRACPETEHVFHDKFWEGL-DVIIN 581 Query: 527 CIDNIDTKVSLLAACVRRGLRVLSAMGAGARADPTRIRVADLRE---SSNDP 673 +DN++ ++ + C+ +L + G + + T++ + L E +S DP Sbjct: 582 ALDNVNARMYMDMRCLYFQKPLLESGTLGPKCN-TQMVIPHLTENYGASRDP 632
>Os03g0145000:Os03g0145000 | Length = 1324 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -1 Query: 876 NIAGIVPSTGIMRTLNPGTIW*SDGVSSSFEP*KGSS 766 N+ G VP+TG++RT+NP + + G+ P G+S Sbjct: 583 NLTGPVPATGLLRTINPDDLAGNPGLCGGVLPPCGAS 619
>AK102537:Os01g0259400 | Length = 1346 Score = 29.3 bits (64), Expect = 8.6 Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Frame = +2 Query: 524 DCIDNIDTKVSLLAACVRRGLRVLSAMGAGARADPTRIRVADLRESSNDPLSRAVRHRLK 703 +C +N+D + + C+R+ R + GA A ++P+ I A + D + V K Sbjct: 452 NCSENLDVVATPPSICMRKAQRAKTTSGAAAGSEPSDISAAFWHPT--DLAVKPVMPGRK 509 Query: 704 KDHGIE-------GGIPVVFSMEKPKAKLLPFQGSKEEETPSDYQI 820 D +E +P V ++ P+ ++ F + +Q+ Sbjct: 510 GDKAVETVPMLPFEALPAVDYIKLPREQMNAFNSQILQSLSGTFQV 555 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,430,818 Number of extensions: 1094700 Number of successful extensions: 3029 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3023 Number of HSP's successfully gapped: 13 Length of query: 553 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 447 Effective length of database: 11,155,509 Effective search space: 4986512523 Effective search space used: 4986512523 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
