>P52604:KLCB1_ECOLI Protein klcB - Escherichia coli|
          Length = 401
 Score = 33.9 bits (76), Expect = 0.82
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -1

Query: 438 ARPAATG-GGGRHRD-----LAPRCTGSTANYCTATAPPQQPRWSPPGAGATTRRT 289
           AR  A G  GGR RD      A RC+ + A+ C A A P  P  + PGAG  +  T
Sbjct: 254 ARSNAKGKAGGRERDPASAETAMRCSTAKADDCKAEAGPVSPEATMPGAGEASCST 309

>P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 1367

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = -3

Query: 343 AATAPLVPAGSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPPAS 164
           +++AP+  + + S   P  SS   S+ +  PT       S  ES+S+P+TSS   S  A 
Sbjct: 366 SSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSS----STTESSSAPVTSSTTESSSAP 421

Query: 163 VTDST 149
           VT ST
Sbjct: 422 VTSST 426



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 24/65 (36%), Positives = 34/65 (52%)
 Frame = -3

Query: 343 AATAPLVPAGSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPPAS 164
           +++AP VP  S S    + + V SST  ++         S  ES+S+P+TSS   S  A 
Sbjct: 324 SSSAP-VPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAP 382

Query: 163 VTDST 149
           VT ST
Sbjct: 383 VTSST 387



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -3

Query: 343 AATAPLVPAGSGSDDTPNVSSVLSSTI--SAAPTFFLRFLVSLFESTSSPITSSRFLSPP 170
           +++AP VP  S S    + + V SST   S+AP        S  ES+S+P+TSS   S  
Sbjct: 390 SSSAP-VPTPSSSTTESSSAPVTSSTTESSSAPV-----TSSTTESSSAPVTSSTTESSS 443

Query: 169 ASVTDST 149
           A VT ST
Sbjct: 444 APVTSST 450

>P56975:NRG3_HUMAN Pro-neuregulin-3, membrane-bound isoform precursor - Homo sapiens|
           (Human)
          Length = 720

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -3

Query: 343 AATAPLVPA--GSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPP 170
           + T+P  P+  G+ S  TPN  S   +TI+ APT F    V +  S  S  T++R  + P
Sbjct: 133 STTSPATPSAGGAASSRTPNRISTRLTTITRAPTRFPGHRVPIRASPRS--TTARNTAAP 190

Query: 169 ASVTDST 149
           A+V  +T
Sbjct: 191 ATVPSTT 197

>Q9H195:MUC3B_HUMAN Mucin-3B - Homo sapiens (Human)|
          Length = 901

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 26/67 (38%), Positives = 36/67 (53%)
 Frame = -3

Query: 343 AATAPLVPAGSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPPAS 164
           A T+P   A +G   TP+  S LS+ I   PT  LR L  L  STS+ +T++  L  P+ 
Sbjct: 35  AITSPFTTAETGVTSTPSSPSSLSTDI---PTTSLRTLTPLSLSTSTSLTTTTDL--PSI 89

Query: 163 VTDSTPL 143
            TD + L
Sbjct: 90  PTDISSL 96

>O35181:NRG3_MOUSE Pro-neuregulin-3, membrane-bound isoform precursor - Mus musculus|
           (Mouse)
          Length = 713

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -3

Query: 343 AATAPLVPA--GSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPP 170
           + T+P  P+  G+ S  TPN  S   +TI+ APT F    V +  S  S  T+    +PP
Sbjct: 133 STTSPATPSAGGAASSRTPNRISTRLTTITRAPTRFPGHRVPIRASPRS-TTARNTAAPP 191

Query: 169 ASVTDSTPLAVAAT 128
             ++ + P   ++T
Sbjct: 192 TVLSTTAPFFSSST 205

>Q5JK52:NADK1_ORYSJ Probable NAD kinase 1 - Oryza sativa subsp. japonica (Rice)|
          Length = 532

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 182 ESAAGDWRRR-GLEQANQEPQKEGGRCGDRGAEDARHVRRVVAPAPGGDQRGCCG 343
           ++ A +WRR+  LE A+++ +K  G       E  +   ++    P  DQ GCCG
Sbjct: 89  QAEAEEWRRKYELEMAHKQQRKIKGYGSCANNELEKLASQLTLETPASDQAGCCG 143

>Q8IY33:MILK2_HUMAN MICAL-like protein 2 - Homo sapiens (Human)|
          Length = 904

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -1

Query: 435 RPAATGGGGRHRDLAPRCTGSTANYCTATAPPQQPRWSP 319
           RPA   GGG  R  AP+ T S+++   AT  P  P W+P
Sbjct: 372 RPATPQGGGAPRVAAPQTTLSSSSTSAATVDP--PAWTP 408

>Q04893:YM96_YEAST Uncharacterized protein YMR317W - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 1140

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 20/74 (27%), Positives = 41/74 (55%)
 Frame = -3

Query: 352 DRPAATAPLVPAGSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSP 173
           + P++T+ +V + + S  + +VSS +SST S++ +       S   S+ +P ++S  +S 
Sbjct: 299 EAPSSTSSVVSSEAPSSTSSSVSSEISSTTSSSVSSEAPLATSSVVSSEAPSSTSSSVSS 358

Query: 172 PASVTDSTPLAVAA 131
             S T S+ ++  A
Sbjct: 359 EISSTTSSSVSSEA 372

>O15146:MUSK_HUMAN Muscle, skeletal receptor tyrosine protein kinase precursor - Homo|
           sapiens (Human)
          Length = 869

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 358 YGDRPAATAPLVPAGSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFES 212
           Y      T P + +   S D PN+ S  SS+ S +PT+ +  ++S+  S
Sbjct: 455 YNKENLKTFPPMTSSKPSVDIPNLPSSSSSSFSVSPTYSMTVIISIMSS 503

>P38739:WSC4_YEAST Cell wall integrity and stress response component 4 precursor -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 605

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = -3

Query: 340 ATAPLVPAGSGSDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPPASV 161
           +T PL  A + +  + +++S L +T S   +  +    S   STS+  ++S   S   SV
Sbjct: 158 STTPLTTASTSTTPSTDITSALPTTTSTKLSTSIP--TSTTSSTSTTTSTSSSTSTTVSV 215

Query: 160 TDSTPLAVAATFMALV 113
           T ST    + T   L+
Sbjct: 216 TSSTSTTTSTTSSTLI 231

>Q0IBG9:FOLD_SYNS3 Bifunctional protein folD [Includes: Methylenetetrahydrofolate|
           dehydrogenase - Synechococcus sp. (strain CC9311)
          Length = 293

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 245 EGGRCGDRGAEDARHVRRVVAPAPGG 322
           EGG CGD  AE+   V   ++P PGG
Sbjct: 236 EGGLCGDVCAEELEPVAAALSPVPGG 261

>Q7TTW4:FOLD_SYNPX Bifunctional protein folD [Includes: Methylenetetrahydrofolate|
           dehydrogenase - Synechococcus sp. (strain WH8102)
          Length = 293

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 245 EGGRCGDRGAEDARHVRRVVAPAPGG 322
           EGG CGD  AE+   +   ++P PGG
Sbjct: 236 EGGLCGDVVAEEVEPIAAALSPVPGG 261

>P53301:CRH1_YEAST Probable glycosidase CRH1 precursor - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 507

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = -3

Query: 307 SDDTPNVSSVLSSTISAAPTFFLRFLVSLFESTSSPITSSRFLSPPASVTDST 149
           S  +  VSS +SST+S++ +  +   VS   S+SS ++SS   SP +S   S+
Sbjct: 314 SSASSTVSSSVSSTVSSSASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTATSS 366

>P36825:VE7_HPV27 Protein E7 - Human papillomavirus type 27|
          Length = 92

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 690 EENFHEKLNPAVQAMGVCATVCSSHRS 610
           EEN H+   PAVQA GV  T C   R+
Sbjct: 35  EENNHQLTEPAVQAYGVVTTCCKCGRA 61

>Q502A3:F100B_DANRE Protein FAM100B - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 172

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 423 TGGGGRHRDLAPRCTGSTANYCTATAPPQQPRWSPPGA 310
           + GGG    ++  C+   A++  +  P QQP W PP +
Sbjct: 93  SAGGGSSAQVSMACSPPHASFWASPPPNQQPVWLPPSS 130

>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
          Length = 791

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 203 RRRGLEQANQEPQKEGGRCGDRGAEDARHV 292
           R  G  +++   Q  GGR G  GAEDARHV
Sbjct: 8   RAVGALRSDGSIQGRGGRAGGSGAEDARHV 37

>A1SZY2:HLDE_PSYIN Bifunctional protein hldE [Includes: D-beta-D-heptose 7-phosphate|
           kinase - Psychromonas ingrahamii (strain 37)
          Length = 476

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 156 SVTLAGGDKNLLLVIGDDVDSNKLTKNLK 242
           +V   GG  NL+ ++GDD  +N L KNLK
Sbjct: 59  NVAALGGKVNLIGLVGDDEAANVLVKNLK 87

>P79777:BRAC_CHICK Brachyury protein - Gallus gallus (Chicken)|
          Length = 433

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 16/84 (19%)
 Frame = -3

Query: 313 SGSDDTPNVSSVLSSTISAAP----------TFFLRFLVSLFESTSSPITSSRFLSP--- 173
           + S   PN+ SV +STI+ AP          + FLR     + +   P+T++   SP   
Sbjct: 342 TSSSQYPNLWSVSNSTITPAPQSSGMSNGLSSQFLRGSPVHYTALPHPVTATTSTSPLYD 401

Query: 172 ---PASVTDSTPLAVAATFMALVW 110
              PA + DS   A A T +A +W
Sbjct: 402 GGAPADLPDSQYDASAHTRLASMW 425


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 128,275,124
Number of extensions: 2626449
Number of successful extensions: 8395
Number of sequences better than 10.0: 18
Number of HSP's gapped: 8374
Number of HSP's successfully gapped: 20
Length of query: 280
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 168
Effective length of database: 69,965,399
Effective search space: 11754187032
Effective search space used: 11754187032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)