| Clone Name | FLbaf63j15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001053789.1| Oryza sativa (japonica cultivar-group) Os02g0582600 (Os02g0582600) mRNA, complete cds Length = 1209 Score = 157 bits (79), Expect = 8e-35 Identities = 151/175 (86%) Strand = Plus / Plus Query: 120 gccatgaaagtggcagccactgctagcggggtggagtcggtgacgctggccggcggcgac 179 |||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 252 gccatgaaagaggctgctactgtcagcggggtgcagtcggtgacgctggccggcggcgac 311 Query: 180 aagaatctgctgctggtgattggcgacgacgtggactcgaacaagctaaccaagaacctc 239 ||| |||||||||||||| ||||| | ||||||| |||||||||| |||||||| ||| Sbjct: 312 cggaacctgctgctggtgatcggcgagggcgtggacacgaacaagctgaccaagaagctc 371 Query: 240 aaaaagaaggtgggcgctgcggagatcgtggagctgaggacgctcgacacgttcg 294 || | |||||||||| | | |||||||| ||||||||||| |||||||||||| Sbjct: 372 aagaggaaggtgggctccggtgagatcgtcgagctgaggaccgtcgacacgttcg 426 Score = 107 bits (54), Expect = 6e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 461 cggcagcagctactcacgcgcggtggcgcgcagccacccgggaaactactcgcccctggt 520 ||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||||| Sbjct: 686 cggcagcagctactcccgcgcggtggcgctcagccacccggccatctactcgccgctggt 745 Query: 521 tgagaggcacgactactaccccatggaccactcc 554 |||| |||||||||| |||||||| |||||||| Sbjct: 746 ggagaagcacgactaccaccccatgaaccactcc 779
>dbj|AK102380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092A09, full insert sequence Length = 1210 Score = 157 bits (79), Expect = 8e-35 Identities = 151/175 (86%) Strand = Plus / Plus Query: 120 gccatgaaagtggcagccactgctagcggggtggagtcggtgacgctggccggcggcgac 179 |||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 253 gccatgaaagaggctgctactgtcagcggggtgcagtcggtgacgctggccggcggcgac 312 Query: 180 aagaatctgctgctggtgattggcgacgacgtggactcgaacaagctaaccaagaacctc 239 ||| |||||||||||||| ||||| | ||||||| |||||||||| |||||||| ||| Sbjct: 313 cggaacctgctgctggtgatcggcgagggcgtggacacgaacaagctgaccaagaagctc 372 Query: 240 aaaaagaaggtgggcgctgcggagatcgtggagctgaggacgctcgacacgttcg 294 || | |||||||||| | | |||||||| ||||||||||| |||||||||||| Sbjct: 373 aagaggaaggtgggctccggtgagatcgtcgagctgaggaccgtcgacacgttcg 427 Score = 107 bits (54), Expect = 6e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 461 cggcagcagctactcacgcgcggtggcgcgcagccacccgggaaactactcgcccctggt 520 ||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||||| Sbjct: 687 cggcagcagctactcccgcgcggtggcgctcagccacccggccatctactcgccgctggt 746 Query: 521 tgagaggcacgactactaccccatggaccactcc 554 |||| |||||||||| |||||||| |||||||| Sbjct: 747 ggagaagcacgactaccaccccatgaaccactcc 780
>dbj|AK059791.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E03, full insert sequence Length = 1107 Score = 157 bits (79), Expect = 8e-35 Identities = 151/175 (86%) Strand = Plus / Plus Query: 120 gccatgaaagtggcagccactgctagcggggtggagtcggtgacgctggccggcggcgac 179 |||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 147 gccatgaaagaggctgctactgtcagcggggtgcagtcggtgacgctggccggcggcgac 206 Query: 180 aagaatctgctgctggtgattggcgacgacgtggactcgaacaagctaaccaagaacctc 239 ||| |||||||||||||| ||||| | ||||||| |||||||||| |||||||| ||| Sbjct: 207 cggaacctgctgctggtgatcggcgagggcgtggacacgaacaagctgaccaagaagctc 266 Query: 240 aaaaagaaggtgggcgctgcggagatcgtggagctgaggacgctcgacacgttcg 294 || | |||||||||| | | |||||||| ||||||||||| |||||||||||| Sbjct: 267 aagaggaaggtgggctccggtgagatcgtcgagctgaggaccgtcgacacgttcg 321 Score = 107 bits (54), Expect = 6e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 461 cggcagcagctactcacgcgcggtggcgcgcagccacccgggaaactactcgcccctggt 520 ||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||||| Sbjct: 581 cggcagcagctactcccgcgcggtggcgctcagccacccggccatctactcgccgctggt 640 Query: 521 tgagaggcacgactactaccccatggaccactcc 554 |||| |||||||||| |||||||| |||||||| Sbjct: 641 ggagaagcacgactaccaccccatgaaccactcc 674
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 143 bits (72), Expect = 1e-30 Identities = 129/148 (87%) Strand = Plus / Minus Query: 147 ggggtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgattggcgac 206 |||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||| Sbjct: 22488532 ggggtgcagtcggtgacgctggccggcggcgaccggaacctgctgctggtgatcggcgag 22488473 Query: 207 gacgtggactcgaacaagctaaccaagaacctcaaaaagaaggtgggcgctgcggagatc 266 | ||||||| |||||||||| |||||||| ||||| | |||||||||| | | |||||| Sbjct: 22488472 ggcgtggacacgaacaagctgaccaagaagctcaagaggaaggtgggctccggtgagatc 22488413 Query: 267 gtggagctgaggacgctcgacacgttcg 294 || ||||||||||| |||||||||||| Sbjct: 22488412 gtcgagctgaggaccgtcgacacgttcg 22488385 Score = 107 bits (54), Expect = 6e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 461 cggcagcagctactcacgcgcggtggcgcgcagccacccgggaaactactcgcccctggt 520 ||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||||| Sbjct: 22488125 cggcagcagctactcccgcgcggtggcgctcagccacccggccatctactcgccgctggt 22488066 Query: 521 tgagaggcacgactactaccccatggaccactcc 554 |||| |||||||||| |||||||| |||||||| Sbjct: 22488065 ggagaagcacgactaccaccccatgaaccactcc 22488032 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 1978543 ctcctcctcctccggcggcggc 1978522 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 3564494 ctcctcctcctccggcggcggc 3564515 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 550 actcctcctcctccggcggcgg 571 |||||||||||||||||||||| Sbjct: 7428150 actcctcctcctccggcggcgg 7428171 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 agcggggtggagtcggtgacgctggccgg 172 ||||||||||| |||||| |||||||||| Sbjct: 22570643 agcggggtggactcggtggcgctggccgg 22570615
>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016D04 Length = 147313 Score = 143 bits (72), Expect = 1e-30 Identities = 129/148 (87%) Strand = Plus / Minus Query: 147 ggggtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgattggcgac 206 |||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||| Sbjct: 58888 ggggtgcagtcggtgacgctggccggcggcgaccggaacctgctgctggtgatcggcgag 58829 Query: 207 gacgtggactcgaacaagctaaccaagaacctcaaaaagaaggtgggcgctgcggagatc 266 | ||||||| |||||||||| |||||||| ||||| | |||||||||| | | |||||| Sbjct: 58828 ggcgtggacacgaacaagctgaccaagaagctcaagaggaaggtgggctccggtgagatc 58769 Query: 267 gtggagctgaggacgctcgacacgttcg 294 || ||||||||||| |||||||||||| Sbjct: 58768 gtcgagctgaggaccgtcgacacgttcg 58741 Score = 107 bits (54), Expect = 6e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 461 cggcagcagctactcacgcgcggtggcgcgcagccacccgggaaactactcgcccctggt 520 ||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||||| Sbjct: 58481 cggcagcagctactcccgcgcggtggcgctcagccacccggccatctactcgccgctggt 58422 Query: 521 tgagaggcacgactactaccccatggaccactcc 554 |||| |||||||||| |||||||| |||||||| Sbjct: 58421 ggagaagcacgactaccaccccatgaaccactcc 58388 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 agcggggtggagtcggtgacgctggccgg 172 ||||||||||| |||||| |||||||||| Sbjct: 140999 agcggggtggactcggtggcgctggccgg 140971
>gb|AY023299.1| Oryza sativa microsatellite MRG5624 containing (GGT)X8, closest to marker C621, genomic sequence Length = 224 Score = 83.8 bits (42), Expect = 9e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 477 cgcgcggtggcgcgcagccacccgggaaactactcgcccctggttgagaggcacgactac 536 ||||||||||||| ||||||||||| | ||||||||| ||||| |||| |||||||||| Sbjct: 220 cgcgcggtggcgctcagccacccggccatctactcgccgctggtggagaagcacgactac 161 Query: 537 taccccatggaccactcc 554 |||||||| |||||||| Sbjct: 160 caccccatgaaccactcc 143
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 153 gagtcggtgacgctggccggcggcgacaagaatctgctgctggtgattggcgacgacgtg 212 |||||||| ||| |||||||| | |||| | | |||||||||||||| ||||||| |||| Sbjct: 23358196 gagtcggtcacggtggccggcagggacagggacctgctgctggtgatcggcgacggcgtg 23358137 Query: 213 gactcgaacaagctaaccaagaa 235 ||| || |||||| |||||||| Sbjct: 23358136 gacgagagcaagctgaccaagaa 23358114 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 23384781 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 23384732 Score = 46.1 bits (23), Expect = 0.20 Identities = 44/51 (86%) Strand = Plus / Minus Query: 483 gtggcgcgcagccacccgggaaactactcgcccctggttgagaggcacgac 533 |||||||| |||||||||| ||||||||||| |||| ||| |||||||| Sbjct: 23357716 gtggcgcgaagccacccggcgaactactcgccgatggtggagcggcacgac 23357666
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 153 gagtcggtgacgctggccggcggcgacaagaatctgctgctggtgattggcgacgacgtg 212 |||||||| ||| |||||||| | |||| | | |||||||||||||| ||||||| |||| Sbjct: 75517 gagtcggtcacggtggccggcagggacagggacctgctgctggtgatcggcgacggcgtg 75458 Query: 213 gactcgaacaagctaaccaagaa 235 ||| || |||||| |||||||| Sbjct: 75457 gacgagagcaagctgaccaagaa 75435 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 102102 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 102053 Score = 46.1 bits (23), Expect = 0.20 Identities = 44/51 (86%) Strand = Plus / Minus Query: 483 gtggcgcgcagccacccgggaaactactcgcccctggttgagaggcacgac 533 |||||||| |||||||||| ||||||||||| |||| ||| |||||||| Sbjct: 75037 gtggcgcgaagccacccggcgaactactcgccgatggtggagcggcacgac 74987
>emb|CT828418.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA206G08, full insert sequence Length = 623 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 86 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 135
>ref|NM_001059575.1| Oryza sativa (japonica cultivar-group) Os04g0468600 (Os04g0468600) mRNA, complete cds Length = 1045 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 223 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 272
>dbj|AK109364.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-F09, full insert sequence Length = 1047 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 223 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 272
>dbj|AK105886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E02, full insert sequence Length = 1100 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 225 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 274
>dbj|AK102569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097L18, full insert sequence Length = 1212 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 224 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 273
>dbj|AK066718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087B08, full insert sequence Length = 1088 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 213 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 262
>dbj|AK061332.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A07, full insert sequence Length = 1004 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 gtggagtcggtgacgctggccggcggcgacaagaatctgctgctggtgat 199 ||||| || |||||||| ||||||| |||||||| |||||||||||||| Sbjct: 129 gtggaatccgtgacgctcgccggcgaggacaagaacctgctgctggtgat 178
>ref|NM_001074809.1| Oryza sativa (japonica cultivar-group) Os11g0615600 (Os11g0615600) mRNA, complete cds Length = 1007 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggcag 574 ||||||||||||||||||||||| Sbjct: 209 tcctcctcctccggcggcggcag 187
>ref|NM_001057234.1| Oryza sativa (japonica cultivar-group) Os03g0626100 (Os03g0626100) mRNA, complete cds Length = 1995 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 553 cctcctcctccggcggcggcagc 575 ||||||||||||||||||||||| Sbjct: 193 cctcctcctccggcggcggcagc 171
>ref|XR_010204.1| PREDICTED: Macaca mulatta retinoblastoma-like 2 (p130) (RBL2), mRNA Length = 5741 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 553 cctcctcctccggcggcggcagc 575 ||||||||||||||||||||||| Sbjct: 148 cctcctcctccggcggcggcagc 170
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 553 cctcctcctccggcggcggcagc 575 ||||||||||||||||||||||| Sbjct: 91877 cctcctcctccggcggcggcagc 91855
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggcag 574 ||||||||||||||||||||||| Sbjct: 96296 tcctcctcctccggcggcggcag 96274
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggcag 574 ||||||||||||||||||||||| Sbjct: 23080293 tcctcctcctccggcggcggcag 23080271 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 24350157 tcctcctcctccggcggcggc 24350177
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 553 cctcctcctccggcggcggcagc 575 ||||||||||||||||||||||| Sbjct: 23636822 cctcctcctccggcggcggcagc 23636800 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 24265272 ctcctcctcctccggcggcgg 24265292
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 149 ggtggagtcggtgacgctggccg 171 ||||||||||||||||||||||| Sbjct: 8832728 ggtggagtcggtgacgctggccg 8832706
>dbj|AK119864.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A03, full insert sequence Length = 1995 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 553 cctcctcctccggcggcggcagc 575 ||||||||||||||||||||||| Sbjct: 193 cctcctcctccggcggcggcagc 171
>dbj|AK107101.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-122-A04, full insert sequence Length = 1007 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggcag 574 ||||||||||||||||||||||| Sbjct: 209 tcctcctcctccggcggcggcag 187
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 278 gacgctcgacacgttcggcgtg 299 |||||||||||||||||||||| Sbjct: 2652050 gacgctcgacacgttcggcgtg 2652071
>emb|CT831514.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129B22, full insert sequence Length = 1884 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 1246 ctcctcctcctccggcggcggc 1225
>ref|NM_001073512.1| Oryza sativa (japonica cultivar-group) Os12g0552200 (Os12g0552200) mRNA, partial cds Length = 1522 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 859 ctcctcctcctccggcggcggc 838
>ref|NM_001068828.1| Oryza sativa (japonica cultivar-group) Os08g0525700 (Os08g0525700) mRNA, complete cds Length = 3426 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 102 ctcctcctcctccggcggcggc 81
>ref|NM_001067656.1| Oryza sativa (japonica cultivar-group) Os08g0177000 (Os08g0177000) mRNA, complete cds Length = 1327 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 484 ctcctcctcctccggcggcggc 505
>ref|NM_001067655.1| Oryza sativa (japonica cultivar-group) Os08g0176900 (Os08g0176900) mRNA, complete cds Length = 1974 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 1239 ctcctcctcctccggcggcggc 1218
>ref|NM_001065613.1| Oryza sativa (japonica cultivar-group) Os07g0187900 (Os07g0187900) mRNA, partial cds Length = 2295 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 1879 ctcctcctcctccggcggcggc 1858
>ref|NM_001052902.1| Oryza sativa (japonica cultivar-group) Os02g0231500 (Os02g0231500) mRNA, complete cds Length = 432 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 550 actcctcctcctccggcggcgg 571 |||||||||||||||||||||| Sbjct: 144 actcctcctcctccggcggcgg 123
>ref|NM_001049708.1| Oryza sativa (japonica cultivar-group) Os01g0511600 (Os01g0511600) mRNA, complete cds Length = 2081 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 340 ctcctcctcctccggcggcggc 319
>ref|XM_001077498.1| PREDICTED: Rattus norvegicus similar to myosin XV (predicted) (RGD1561873_predicted), mRNA Length = 10539 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 tggctatggctacggctacggc 464 |||||||||||||||||||||| Sbjct: 903 tggctatggctacggctacggc 924
>ref|XM_577100.2| PREDICTED: Rattus norvegicus similar to myosin XV (predicted) (RGD1561873_predicted), mRNA Length = 10539 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 tggctatggctacggctacggc 464 |||||||||||||||||||||| Sbjct: 903 tggctatggctacggctacggc 924
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 293678 ctcctcctcctccggcggcggc 293657
>gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete sequence Length = 124839 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Minus Query: 683 ttttcttcttatgggttttattttgg 708 ||||||||||||||||||||| |||| Sbjct: 44999 ttttcttcttatgggttttatgttgg 44974
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Minus Query: 278 gacgctcgacacgttcggcgtgtcgt 303 |||||||| ||||||||||||||||| Sbjct: 3698614 gacgctcggcacgttcggcgtgtcgt 3698589
>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence Length = 89850 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Minus Query: 683 ttttcttcttatgggttttattttgg 708 ||||||||||||||||||||| |||| Sbjct: 12357 ttttcttcttatgggttttatgttgg 12332
>gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete sequence Length = 117929 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Minus Query: 683 ttttcttcttatgggttttattttgg 708 ||||||||||||||||||||| |||| Sbjct: 8065 ttttcttcttatgggttttatgttgg 8040
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 22452241 ctcctcctcctccggcggcggc 22452220
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 4500136 ctcctcctcctccggcggcggc 4500157 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 5427714 tcctcctcctccggcggcggc 5427734
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 4731267 ctcctcctcctccggcggcggc 4731246 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 13433171 ctcctcctcctccggcggcgg 13433151
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 18012797 ctcctcctcctccggcggcggc 18012818
>emb|X56682.1|DAOM1D D. ananassae Om(1D) gene Length = 6726 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 2447 ctcctcctcctccggcggcggc 2426
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 23984 ctcctcctcctccggcggcggc 24005
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 40038 ctcctcctcctccggcggcggc 40059
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 132632 ctcctcctcctccggcggcggc 132653
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 49177 ctcctcctcctccggcggcggc 49156
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 5780 ctcctcctcctccggcggcggc 5759
>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1711_D06 Length = 87613 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 550 actcctcctcctccggcggcgg 571 |||||||||||||||||||||| Sbjct: 71191 actcctcctcctccggcggcgg 71212
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 550 actcctcctcctccggcggcgg 571 |||||||||||||||||||||| Sbjct: 21856 actcctcctcctccggcggcgg 21877
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 109289 ctcctcctcctccggcggcggc 109310
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 45784 ctcctcctcctccggcggcggc 45805
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 28751 ctcctcctcctccggcggcggc 28730
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 118104 ctcctcctcctccggcggcggc 118083
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 66026 ctcctcctcctccggcggcggc 66047
>dbj|AK107399.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-D08, full insert sequence Length = 1327 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 484 ctcctcctcctccggcggcggc 505
>dbj|AK107028.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A09, full insert sequence Length = 1974 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 1239 ctcctcctcctccggcggcggc 1218
>dbj|AK106375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D02, full insert sequence Length = 1522 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 859 ctcctcctcctccggcggcggc 838
>dbj|AK072161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132P06, full insert sequence Length = 2716 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 341 ctcctcctcctccggcggcggc 320
>dbj|AK069638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026J04, full insert sequence Length = 3431 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 105 ctcctcctcctccggcggcggc 84
>dbj|AK062594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A06, full insert sequence Length = 2300 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 1884 ctcctcctcctccggcggcggc 1863
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 gacgctcgacacgttcggcgtgtcgt 303 |||||||| ||||||||||||||||| Sbjct: 1422436 gacgctcggcacgttcggcgtgtcgt 1422461
>emb|AL590144.10| Mouse DNA sequence from clone RP23-79F10 on chromosome 15, complete sequence Length = 166677 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 tggaccactcctcctcctccgg 565 |||||||||||||||||||||| Sbjct: 37110 tggaccactcctcctcctccgg 37089
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 55293 ctcctcctcctccggcggcggc 55314
>emb|AL672233.18| Mouse DNA sequence from clone RP23-54I20 on chromosome X, complete sequence Length = 163349 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 aataccaaaccaaagccatgaa 127 |||||||||||||||||||||| Sbjct: 73587 aataccaaaccaaagccatgaa 73566
>gb|M59962.1|DROBARH1A1 Drosophila ananassae homeobox protein (BarH1) gene, exon 1 Length = 926 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggc 572 |||||||||||||||||||||| Sbjct: 760 ctcctcctcctccggcggcggc 739
>gb|CP000460.1| Burkholderia cenocepacia HI2424 chromosome 3, complete genome Length = 1055417 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 tcctccggcggcggcagcacc 578 ||||||||||||||||||||| Sbjct: 680691 tcctccggcggcggcagcacc 680671
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 acgctcgacacgttcggcgtgtcgt 303 ||||||| ||||||||||||||||| Sbjct: 796564 acgctcggcacgttcggcgtgtcgt 796588
>emb|CT835403.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119N11, full insert sequence Length = 1240 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 agcggggtggagtcggtgacgctggccgg 172 ||||||||||| |||||| |||||||||| Sbjct: 831 agcggggtggactcggtggcgctggccgg 859
>dbj|AK241046.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065061J01, full insert sequence Length = 4456 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 agcggggtggagtcggtgacgctggccgg 172 ||||||||||| |||||| |||||||||| Sbjct: 1269 agcggggtggactcggtggcgctggccgg 1297
>dbj|AK242785.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090056F15, full insert sequence Length = 1695 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 171 tcctcctcctccggcggcggc 151
>dbj|AK241562.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065178P16, full insert sequence Length = 644 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 agcggggtggagtcggtgacgctggccgg 172 ||||||||||| |||||| |||||||||| Sbjct: 249 agcggggtggactcggtggcgctggccgg 277
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 214340 ctccccctccggcggcggcagcacc 214316
>ref|NM_001070980.1| Oryza sativa (japonica cultivar-group) Os10g0365200 (Os10g0365200) mRNA, partial cds Length = 1000 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 293 tcctcctcctccggcggcggc 273
>ref|NM_001070646.1| Oryza sativa (japonica cultivar-group) Os10g0133500 (Os10g0133500) mRNA, complete cds Length = 1762 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 345 ctcctcctcctccggcggcgg 325
>gb|DQ836008.1| Udeniomyces puniceus isolate AFTOL-ID 1822 from Japan RNA polymerase II second largest subunit (rpb2) gene, partial cds Length = 1176 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ggactcgaacaagctaaccaagaacctca 240 |||||||||| |||| ||||||||||||| Sbjct: 643 ggactcgaacgagctcaccaagaacctca 671
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 217605 ctccccctccggcggcggcagcacc 217581
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 acgctcgacacgttcggcgtgtcgt 303 ||||||| ||||||||||||||||| Sbjct: 247388 acgctcggcacgttcggcgtgtcgt 247412 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 tcctccggcggcggcagcacc 578 ||||||||||||||||||||| Sbjct: 1503302 tcctccggcggcggcagcacc 1503322
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 609 ggctccggtggctgctgcatacagt 633 ||||||||||||||| ||||||||| Sbjct: 233708 ggctccggtggctgccgcatacagt 233684
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 acgctcgacacgttcggcgtgtcgt 303 ||||||| ||||||||||||||||| Sbjct: 522650 acgctcggcacgttcggcgtgtcgt 522674
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 acgctcgacacgttcggcgtgtcgt 303 ||||||| ||||||||||||||||| Sbjct: 699339 acgctcggcacgttcggcgtgtcgt 699363
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 14770 ctcctcctcctccggcggcgg 14750
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 44920 ctcctcctcctccggcggcgg 44900
>gb|BT018915.1| Zea mays clone EL01T0403H03.d mRNA sequence Length = 1155 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 764 ctcctcctcctccggcggcgg 784
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 114755 ctcctcctcctccggcggcgg 114735
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggcagc 575 ||||||||||||||||| ||||||| Sbjct: 58213 ctcctcctcctccggcgccggcagc 58189
>gb|AY658191.1| Synthetic construct Peudomonas aeruginosa clone FLH044362.01F PA0190 gene, partial cds Length = 726 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 450 ctccccctccggcggcggcagcacc 426
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tgacgctggccggcggcgaca 180 ||||||||||||||||||||| Sbjct: 1996109 tgacgctggccggcggcgaca 1996129
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 151266 tcctcctcctccggcggcggc 151286
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 32821 ctcctcctcctccggcggcgg 32801
>ref|XM_798525.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.1790) partial mRNA Length = 1701 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ggctatggctacggctacggc 464 ||||||||||||||||||||| Sbjct: 1633 ggctatggctacggctacggc 1613
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 58832 tcctcctcctccggcggcggc 58812
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 2066780 ctcctcctcctccggcggcgg 2066760
>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete sequence Length = 154696 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 41173 tcctcctcctccggcggcggc 41153
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 2066780 ctcctcctcctccggcggcgg 2066760 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 10883063 tcctcctcctccggcggcggc 10883043
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggcagc 575 ||||||||||||||||| ||||||| Sbjct: 21601587 ctcctcctcctccggcgccggcagc 21601563
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 6067201 ctcctcctcctccggcggcgg 6067181
>gb|AC156594.2| Laccaria bicolor clone JGIAHZW-13X, complete sequence Length = 31541 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 accaccaccaccagtcgccgc 429 ||||||||||||||||||||| Sbjct: 8496 accaccaccaccagtcgccgc 8516
>emb|X60173.1|HVNAR7 Hordeum vulgare nar7 gene for NAD(P)H-bispecific nitrate reductase Length = 3538 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 ctcctcctccggcggcggcag 574 ||||||||||||||||||||| Sbjct: 532 ctcctcctccggcggcggcag 552
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 gctcccgctcccggcggggac 325 ||||||||||||||||||||| Sbjct: 159881 gctcccgctcccggcggggac 159861
>emb|AJ697714.1| Pseudomonas aeruginosa partial aph gene for acid phosphatase, allele 6 Length = 348 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 104 ctccccctccggcggcggcagcacc 80
>emb|AJ697713.1| Pseudomonas aeruginosa partial aph gene for acid phosphatase, allele 5 Length = 348 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 104 ctccccctccggcggcggcagcacc 80
>emb|AJ697712.1| Pseudomonas aeruginosa partial aph gene for acid phosphatase, allele 4 Length = 348 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 104 ctccccctccggcggcggcagcacc 80
>emb|AJ697711.1| Pseudomonas aeruginosa partial aph gene for acid phosphatase, allele 3 Length = 348 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 104 ctccccctccggcggcggcagcacc 80
>emb|AJ697710.1| Pseudomonas aeruginosa partial aph gene for acid phosphatase, allele 2 Length = 348 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 104 ctccccctccggcggcggcagcacc 80
>emb|AJ697709.1| Pseudomonas aeruginosa partial aph gene for acid phosphatase, allele 1 Length = 348 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcacc 578 |||| |||||||||||||||||||| Sbjct: 104 ctccccctccggcggcggcagcacc 80
>emb|AJ863511.1| Rhizoctonia fragariae partial mRNA for putative reduced viability upon starvation protein 161 (rvs161 gene) Length = 637 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 554 ctcctcctccggcggcggcagcaccagct 582 ||||||||||||| || |||||||||||| Sbjct: 344 ctcctcctccggctgcagcagcaccagct 316
>gb|AC064875.5| Homo sapiens BAC clone RP11-707E12 from 2, complete sequence Length = 161676 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 802 gatgtttctgcaattatgttg 822 ||||||||||||||||||||| Sbjct: 65108 gatgtttctgcaattatgttg 65128
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 97525 tcctcctcctccggcggcggc 97545
>dbj|AK173799.1| Ciona intestinalis cDNA, clone:citb030m11, full insert sequence Length = 1626 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 750 gtaaatgttaattagctggct 770 ||||||||||||||||||||| Sbjct: 1452 gtaaatgttaattagctggct 1432
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 12854 ctcctcctcctccggcggcgg 12834
>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcggcagc 575 ||||||||||||||||| ||||||| Sbjct: 9911 ctcctcctcctccggcgccggcagc 9887
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 agcggggtggagtcggtgacgctggccgg 172 ||||||||||| |||||| |||||||||| Sbjct: 18454 agcggggtggactcggtggcgctggccgg 18426
>gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, complete sequence Length = 175763 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 611 ctccggtggctgctgcatacagtag 635 |||||| |||||||||||||||||| Sbjct: 24380 ctccggaggctgctgcatacagtag 24356
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0684A03 Length = 64705 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 58930 ctcctcctcctccggcggcgg 58910
>dbj|AK106938.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C12, full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 tcctcctcctccggcggcggc 572 ||||||||||||||||||||| Sbjct: 708 tcctcctcctccggcggcggc 728
>dbj|AK066866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088O08, full insert sequence Length = 1766 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctcctcctcctccggcggcgg 571 ||||||||||||||||||||| Sbjct: 349 ctcctcctcctccggcggcgg 329 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 150,987,062 Number of extensions: 9331294 Number of successful extensions: 218144 Number of sequences better than 10.0: 120 Number of HSP's gapped: 218144 Number of HSP's successfully gapped: 140 Length of query: 840 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 818 Effective length of database: 18,508,616,841 Effective search space: 15140048575938 Effective search space used: 15140048575938 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)