ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61e08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103466:Os03g0156500 | 33 | 0.19 | 2 | AK059852:Os03g0685100 | 33 | 0.19 | 3 | Os09g0372200:Os09g0372200 | 32 | 0.42 | 4 | AK111162: | 32 | 0.42 | 5 | AK099630:Os08g0117100 | 30 | 0.94 | 6 | Os01g0893700:Os01g0893700 | 30 | 1.2 | 7 | AK109377:Os04g0674000 | 29 | 2.1 | 8 | AK069914:Os07g0508200 | 29 | 2.1 | 9 | Os05g0491700:Os05g0491700 | 28 | 3.6 | 10 | Os01g0155800:Os01g0155800 | 28 | 3.6 | 11 | AK101000:Os07g0124500 | 28 | 3.6 | 12 | AK070529:Os07g0124500 | 28 | 3.6 | 13 | AK110081: | 28 | 4.7 | 14 | AK108012:Os11g0182500 | 28 | 4.7 | 15 | AK104654:Os01g0231000 | 28 | 4.7 | 16 | AK072001:Os01g0231000 | 28 | 4.7 | 17 | Os10g0165300:Os10g0165300 | 28 | 6.1 | 18 | AK109130:Os01g0604000 | 28 | 6.1 | 19 | AK067145:Os01g0604000 | 28 | 6.1 | 20 | Os02g0123300:Os02g0123300 | 27 | 8.0 | 21 | AK070951:Os08g0548500 | 27 | 8.0 |
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>AK103466:Os03g0156500 | Length = 481 Score = 32.7 bits (73), Expect = 0.19 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -2 Query: 316 GGGGFANRRDPRNHRGSDG---AGNRWQQREVGHRQPGHRSLHL 194 GGGG RR +H G DG G R GH+Q GH ++ Sbjct: 190 GGGGGGGRRGQEHHGGFDGQRRGGGRRDGHGPGHQQRGHHPSYI 233
>AK059852:Os03g0685100 | Length = 340 Score = 32.7 bits (73), Expect = 0.19 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Frame = +3 Query: 300 ANPPPPTSLHDHLSTYGVRAG-LHAS*SPTTRGSRLAAST-----YRPEENHRRFAQASV 461 A PPP ++ +S+ R L P TRGS A+ +R E+NH++ A + Sbjct: 4 ARAPPPPAMPSAVSSPPQRESILRPYCVPWTRGSVATAAVAKAAPFRGEQNHKQVASVAN 63 Query: 462 PTIVSCVFPFISVKLSCVFPFSHRRL 539 P + CV ++LS + S RR+ Sbjct: 64 PLVKHCV----RLRLSSAYRRSCRRI 85
>Os09g0372200:Os09g0372200 | Length = 365 Score = 31.6 bits (70), Expect = 0.42 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = +3 Query: 213 PGCRCPTSRCCHRLPAPS 266 PGC SRCCHR P PS Sbjct: 345 PGCATVYSRCCHRPPPPS 362
>AK111162: | Length = 252 Score = 31.6 bits (70), Expect = 0.42 Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 2/109 (1%) Frame = +3 Query: 213 PGCRCPTSRCCHRLPAPSLPRWFLGSLRFANPPPPTSLHDHLSTYGVRAGLHAS*SPTTR 392 P R P S +R P P P L L PPPP + ++ SPT+ Sbjct: 139 PPSRAPASAPANRPPPPPRPPRLLPPLPPPPPPPPAT---------------STTSPTST 183 Query: 393 GSRLAASTYRPEENHRRFAQASVPTIVSCVFPFISVKLSC--VFPFSHR 533 + +S RP + R ++ T FP L C +F FS R Sbjct: 184 TASPRSSWSRPTRDRARSLPWTLDTAGQPPFPLYHFSLFCSRLFVFSLR 232
>AK099630:Os08g0117100 | Length = 319 Score = 30.4 bits (67), Expect = 0.94 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +3 Query: 246 HRLPAPSLPRWFLGSLRFANPPPPTSLHDHL 338 H LP P PR L S +PPPP LH HL Sbjct: 12 HHLPNPLHPR-HLSSSSSPSPPPPLHLHLHL 41
>Os01g0893700:Os01g0893700 | Length = 300 Score = 30.0 bits (66), Expect = 1.2 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 9/39 (23%) Frame = -3 Query: 294 GGIPGTTG---------AVTVPVIGGSNGRSGTGSPATG 205 G +PG +G A T+ + GG++G G+G+PATG Sbjct: 177 GTLPGPSGLLAQHKDMAAGTISLSGGTSGGGGSGTPATG 215
>AK109377:Os04g0674000 | Length = 235 Score = 29.3 bits (64), Expect = 2.1 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 9/42 (21%) Frame = +3 Query: 219 CRCPT--------SRCCHRLPAPSL-PRWFLGSLRFANPPPP 317 CRC SR RLP+ +L PRW + R +PPPP Sbjct: 36 CRCRRRRWLRWRGSRISSRLPSLTLFPRWLVRGTRPPSPPPP 77
>AK069914:Os07g0508200 | Length = 356 Score = 29.3 bits (64), Expect = 2.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 Query: 255 PAPSLPRWFLGSLRFANPPPPTSLHDH 335 P PS PR G + + PPP SLH H Sbjct: 9 PPPSFPRGGGGGVGRGHHPPPPSLHHH 35
>Os05g0491700:Os05g0491700 | Length = 286 Score = 28.5 bits (62), Expect = 3.6 Identities = 26/78 (33%), Positives = 28/78 (35%) Frame = -2 Query: 448 AKRR*FSSGRYVLAASLEPRVVGLQLACKPARTP*VDR*SWRLVGGGGFANRRDPRNHRG 269 A RR GR A P V G + R P R GGGG A P R Sbjct: 203 AGRRRRDGGR-AWAGGGRPAVAGWRRLGAGWRRPGTGWGGRRPAGGGGMAAGHGPAGWRT 261 Query: 268 SDGAGNRWQQREVGHRQP 215 + G R E G RQP Sbjct: 262 AGGGPARASGMEAGRRQP 279
>Os01g0155800:Os01g0155800 | Length = 124 Score = 28.5 bits (62), Expect = 3.6 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -2 Query: 325 RLVGGGGFANRRDPRNHRGSDGAGNRWQQREVGHRQPGH 209 +LVGGGG H G G G+ ++Q GH P H Sbjct: 22 KLVGGGG---------HGGGHGGGHGYEQGYGGHGYPPH 51
>AK101000:Os07g0124500 | Length = 936 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -2 Query: 316 GGGGFANRRDPRNHRGSDGAGNRWQQREVGHRQPG 212 GGGG+ R + RG G G+R+Q Q G Sbjct: 881 GGGGYQRDRGSQGSRGGYGGGSRFQDGGRSRNQSG 915
>AK070529:Os07g0124500 | Length = 936 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -2 Query: 316 GGGGFANRRDPRNHRGSDGAGNRWQQREVGHRQPG 212 GGGG+ R + RG G G+R+Q Q G Sbjct: 881 GGGGYQRDRGSQGSRGGYGGGSRFQDGGRSRNQSG 915
>AK110081: | Length = 1013 Score = 28.1 bits (61), Expect = 4.7 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = -3 Query: 300 RTGGIPGTTGAVTVPVIGGSNGRSGTGSPA 211 +TG +PG+ + PV+G ++ + TG+P+ Sbjct: 638 QTGALPGSGTPTSAPVLGSNSSSAITGAPS 667
>AK108012:Os11g0182500 | Length = 105 Score = 28.1 bits (61), Expect = 4.7 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 246 HRLPAPSLPRWFLGSLRFANPPPPTSLHDHLST 344 HR P+P+ RW LGSL SL D + T Sbjct: 77 HRCPSPAAERWLLGSL---------SLEDRIQT 100
>AK104654:Os01g0231000 | Length = 275 Score = 28.1 bits (61), Expect = 4.7 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = +3 Query: 246 HRLPAPSLPRWFLGSLRFANPPPPTSLH-------DHLSTYG--VRAGLHAS*SPTTRGS 398 H LP P P L + + PPPP S D + G +R GL S SP R + Sbjct: 7 HVLPLPMSPPLELDYIGLSPPPPPPSSSSAAAARADDVDLKGTELRLGLPGSESPDRRPA 66 Query: 399 RLAAS 413 +AA+ Sbjct: 67 AIAAA 71
>AK072001:Os01g0231000 | Length = 302 Score = 28.1 bits (61), Expect = 4.7 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = +3 Query: 246 HRLPAPSLPRWFLGSLRFANPPPPTSLH-------DHLSTYG--VRAGLHAS*SPTTRGS 398 H LP P P L + + PPPP S D + G +R GL S SP R + Sbjct: 34 HVLPLPMSPPLELDYIGLSPPPPPPSSSSAAAARADDVDLKGTELRLGLPGSESPDRRPA 93 Query: 399 RLAAS 413 +AA+ Sbjct: 94 AIAAA 98
>Os10g0165300:Os10g0165300 | Length = 501 Score = 27.7 bits (60), Expect = 6.1 Identities = 21/74 (28%), Positives = 27/74 (36%) Frame = +3 Query: 243 CHRLPAPSLPRWFLGSLRFANPPPPTSLHDHLSTYGVRAGLHAS*SPTTRGSRLAASTYR 422 C RLP P F+GSL P SL YG L T S + Sbjct: 29 CRRLPPGPRPLPFIGSLHLLGDQPHRSLAGLAKKYGPLMSLRLGAVTTVVVSSPEVAREF 88 Query: 423 PEENHRRFAQASVP 464 +++ FA S+P Sbjct: 89 VQKHDAVFADRSIP 102
>AK109130:Os01g0604000 | Length = 226 Score = 27.7 bits (60), Expect = 6.1 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 222 RCPTSRCCHRLPAPSLPRWFLGSLRFANPPPP 317 R PTS R+P P PR G + N PPP Sbjct: 94 RRPTSATSRRIPPPPPPRHLPGCGKKWNRPPP 125
>AK067145:Os01g0604000 | Length = 226 Score = 27.7 bits (60), Expect = 6.1 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 222 RCPTSRCCHRLPAPSLPRWFLGSLRFANPPPP 317 R PTS R+P P PR G + N PPP Sbjct: 94 RRPTSATSRRIPPPPPPRHLPGCGKKWNRPPP 125
>Os02g0123300:Os02g0123300 | Length = 984 Score = 27.3 bits (59), Expect = 8.0 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 316 GGGGFANRRDPRNHRGSDGAGNRWQ 242 GGGG+ R + RG G G+R+Q Sbjct: 934 GGGGYQRDRGSQGSRGGYGGGSRFQ 958
>AK070951:Os08g0548500 | Length = 646 Score = 27.3 bits (59), Expect = 8.0 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -3 Query: 330 HGDLLAAVDLRTGGIPGTTGAVTVPVIGGSNGRSGTGSPATG 205 H D L AVD TT P GG+ SG G+ + G Sbjct: 316 HHDALDAVDHAAATTTTTTAMAAKPTGGGAASSSGAGAGSAG 357 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,209,604 Number of extensions: 425545 Number of successful extensions: 1799 Number of sequences better than 10.0: 21 Number of HSP's gapped: 1794 Number of HSP's successfully gapped: 21 Length of query: 201 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 105 Effective length of database: 11,555,919 Effective search space: 1213371495 Effective search space used: 1213371495 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
