ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61e08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ246009.1| Zea mays clone 94552 mRNA sequence Length = 590 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 87 agttagcaatggcaaagcggctcgccgtcgcgctcctgctgctggccctgctcgcgtcc 145 ||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||||| Sbjct: 63 agttagcaatggcaaagtgtctcgccgtcgcgctcctactgctggtggtgctcgcgtcc 121 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 166 cggtgccggtgctggtggcggcgtcggcgag 196 |||||||||||| ||||| |||||||||||| Sbjct: 163 cggtgccggtgccggtggtggcgtcggcgag 193
>gb|DQ245992.1| Zea mays clone 94045 mRNA sequence Length = 596 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 87 agttagcaatggcaaagcggctcgccgtcgcgctcctgctgctggccctgctcgcgtcc 145 ||||||||||||| ||| | ||||||| |||||||||||| ||||| ||||||||||| Sbjct: 64 agttagcaatggcgaagtgtctcgccgccgcgctcctgctactggcggtgctcgcgtcc 122
>gb|AF271260.1|AF271260 Triticum aestivum cold-responsive protein (Wlt10) mRNA, complete cds Length = 548 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 87 agttagcaatggcaaagcggctcgccgtcgcgctcctgctgctggccctgctcgcgtcc 145 ||||||||||||| ||| | ||||||| |||||||||||| ||||| ||||||||||| Sbjct: 41 agttagcaatggcgaagtgtctcgccgccgcgctcctgctactggcggtgctcgcgtcc 99
>gb|M60733.1|BLYCLDAB Hordeum vulgare cold-regulated mRNA, partial cds Length = 770 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 92 gcaatggcaaagcggctcgccgtcgcgctcctgctgctggccctgctcgcgtcc 145 |||||||||||| | |||||||||||||||||||| ||| |||||||||||| Sbjct: 253 gcaatggcaaagtgtctcgccgtcgcgctcctgctagtggtgctgctcgcgtcc 306
>gb|L28091.1|BLYTRA Hordeum vulgare transmembrane protein mRNA fragment Length = 541 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 91 agcaatggcaaagcggctcgccgtcgcgctcctgctgctggccctgctcgcgtc 144 ||||||||||||| | |||||||||||||||||||| |||| |||||||||| Sbjct: 66 agcaatggcaaagagtctcgccgtcgcgctcctgctactggtggtgctcgcgtc 119
>emb|X97916.1|HVBLT141 H.vulgare blt14.1 gene Length = 963 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtggcggcgtcggcgag 196 ||||||||||||||| ||||| |||||||||||| Sbjct: 525 tgccggtgccggtgccggtggtggcgtcggcgag 558 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 95 atggcaaagcggctcgccgtcgcgctcctgctgctgg 131 ||||||||| | ||||||| |||||||||||| |||| Sbjct: 421 atggcaaagtgtctcgccgccgcgctcctgctactgg 457
>gb|L28092.1|BLYTRAA Hordeum vulgare transmembrane protein mRNA fragment Length = 642 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtggcggcgtcggcgag 196 ||||||||||||||| ||||| |||||||||||| Sbjct: 216 tgccggtgccggtgccggtggtggcgtcggcgag 249 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 95 atggcaaagcggctcgccgtcgcgctcctgctgctgg 131 ||||||||| | ||||||| |||||||||||| |||| Sbjct: 112 atggcaaagtgtctcgccgccgcgctcctgctactgg 148
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 154 gggtgccactgccggtgccggtgctggtg 182 |||||||||||||||||||||||| |||| Sbjct: 3419862 gggtgccactgccggtgccggtgccggtg 3419890
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtggcggcgtcggcg 194 ||||||||||||||| |||| ||||||||||| Sbjct: 7027722 tgccggtgccggtgccggtgtcggcgtcggcg 7027691 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gccgggctgccggtgcccgacc 233 |||||||||||||||||||||| Sbjct: 2211236 gccgggctgccggtgcccgacc 2211215 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 108 tcgccgtcgcgctcctgctgctggccctgc 137 |||||||||||||| | ||||||||||||| Sbjct: 6622894 tcgccgtcgcgctcatcctgctggccctgc 6622865 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 162 ctgccggtgccggtgctggtggcggcgtcggcg 194 |||||||||||||||| |||| ||| ||||||| Sbjct: 7027729 ctgccggtgccggtgccggtgccggtgtcggcg 7027697 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtggcgg 186 ||||||||||||||| |||||||| Sbjct: 1088459 tgccggtgccggtgccggtggcgg 1088482 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cggtggccgggctgccggtg 226 |||||||||||||||||||| Sbjct: 1437375 cggtggccgggctgccggtg 1437356
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtggcggcgtc 190 ||||||||||||||| |||||||||||| Sbjct: 216495 tgccggtgccggtgccggtggcggcgtc 216468 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 tcgccgtcgcgctcctgctgctggcc 133 |||||||| ||||||||||||||||| Sbjct: 6377146 tcgccgtctcgctcctgctgctggcc 6377171 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 164 gccggtgccggtgctggtggcggcgtcggcgag 196 |||||||||||||| |||| ||| ||||||||| Sbjct: 1175397 gccggtgccggtgccggtgccggtgtcggcgag 1175365 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cggtggccgggctgccggtg 226 |||||||||||||||||||| Sbjct: 4466312 cggtggccgggctgccggtg 4466331
>emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene Length = 687 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 90 tagcaatggcaaagcggctcgccgtcgcgctcctgctgctggccctgctcgcgtcc 145 |||||||||| ||| | || ||||||||||||||||| |||| ||||||||||| Sbjct: 223 tagcaatggcgaagtgtcttgccgtcgcgctcctgctactggtggtgctcgcgtcc 278
>emb|X57554.1|HVBLT14 H. vulgare BLT14 mRNA Length = 514 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 91 agcaatggcaaagcggctcgccgtcgcgctcc 122 ||||||||||||| | |||||||||||||||| Sbjct: 36 agcaatggcaaagagtctcgccgtcgcgctcc 67
>gb|DQ214124.1| Taeniopygia guttata clone 0058P0008G05 hypothetical protein FLJ25078-like mRNA, complete sequence Length = 1243 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 ctgccggtgccggtgctggtggcggcg 188 |||||||||||| |||||||||||||| Sbjct: 139 ctgccggtgccgctgctggtggcggcg 165
>gb|DQ214123.1| Taeniopygia guttata clone 0058P0060A11 hypothetical protein FLJ25078-like mRNA, complete sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 ctgccggtgccggtgctggtggcggcg 188 |||||||||||| |||||||||||||| Sbjct: 139 ctgccggtgccgctgctggtggcggcg 165
>ref|XM_849251.1| PREDICTED: Canis familiaris similar to small nuclear RNA activating complex, polypeptide 2, 45kDa (LOC611568), mRNA Length = 1095 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 cgctcctgctgctggccctgctc 139 ||||||||||||||||||||||| Sbjct: 14 cgctcctgctgctggccctgctc 36
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cgtcgcgctcctgctgctggccc 134 ||||||||||||||||||||||| Sbjct: 2682909 cgtcgcgctcctgctgctggccc 2682931
>gb|DQ244681.1| Zea mays clone 10024 mRNA sequence Length = 595 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 ggtgccggtgctggtggcggcgtcggcgag 196 ||||| ||||||||||| |||||||||||| Sbjct: 177 ggtgcgggtgctggtggtggcgtcggcgag 206 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctcgccgtcgcgctcctgctgctgg 131 |||||||||||||||||||| |||| Sbjct: 81 ctcgccgtcgcgctcctgctactgg 105
>gb|AC167927.2| Mycosphaerella graminicola clone JGIBBWB-9H22, complete sequence Length = 41182 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 ctcctgctgctggccctgctcgcgtccacc 148 ||||||| |||||||||||||||| ||||| Sbjct: 21836 ctcctgccgctggccctgctcgcgcccacc 21807
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtggcggcg 188 ||||||||||||||| |||||||||| Sbjct: 24402 tgccggtgccggtgccggtggcggcg 24427
>gb|DQ245064.1| Zea mays clone 12589 mRNA sequence Length = 593 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 87 agttagcaatggcaaagcggctcgccgtcgcgctcctgctgctgg 131 ||||| ||||| ||||| | |||||||||||||| ||||| |||| Sbjct: 91 agttaacaatgacaaagtgcctcgccgtcgcgcttctgctactgg 135
>ref|XM_001187586.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC579374 (LOC579374), partial mRNA Length = 922 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 gggtgccactgccggtgccggtgct 178 |||||||| |||||||||||||||| Sbjct: 540 gggtgccagtgccggtgccggtgct 564
>ref|XM_779494.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC579374 (LOC579374), partial mRNA Length = 922 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 gggtgccactgccggtgccggtgct 178 |||||||| |||||||||||||||| Sbjct: 540 gggtgccagtgccggtgccggtgct 564
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccggtgctggtggcggcgtcg 191 ||||||||||||||||||||| Sbjct: 781607 ccggtgctggtggcggcgtcg 781587 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cctgctgctggccctgctcgc 141 ||||||||||||||||||||| Sbjct: 2953559 cctgctgctggccctgctcgc 2953539 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cctgctgctggccctgctcg 140 |||||||||||||||||||| Sbjct: 3551702 cctgctgctggccctgctcg 3551721
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cctgctgctggccctgctcgc 141 ||||||||||||||||||||| Sbjct: 2690234 cctgctgctggccctgctcgc 2690254
>gb|AY658968.1| Synthetic construct Peudomonas aeruginosa clone FLH042578.01F PA2407 gene, partial cds Length = 954 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cctgctgctggccctgctcgc 141 ||||||||||||||||||||| Sbjct: 75 cctgctgctggccctgctcgc 95
>ref|XM_718495.1| Candida albicans SC5314 hypothetical protein (CaO19_4906), mRNA Length = 2307 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 ggtgccactgccggtgccggtgctggtgg 183 ||||||| || |||||||||||||||||| Sbjct: 1702 ggtgccagtggcggtgccggtgctggtgg 1730
>ref|XM_718306.1| Candida albicans SC5314 hypothetical protein (CaO19_12371), mRNA Length = 798 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 ggtgccactgccggtgccggtgctggtgg 183 ||||||| || |||||||||||||||||| Sbjct: 193 ggtgccagtggcggtgccggtgctggtgg 221
>gb|AC102369.21| Mus musculus chromosome 12, clone RP23-246F14, complete sequence Length = 214580 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 ggtgccactgccggtgccggtgctg 179 ||||||||||||||||||| ||||| Sbjct: 126689 ggtgccactgccggtgccgctgctg 126665
>gb|AC133090.4| Mus musculus BAC clone RP24-194H23 from chromosome 15, complete sequence Length = 148555 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cctgctgctggccctgctcgc 141 ||||||||||||||||||||| Sbjct: 81195 cctgctgctggccctgctcgc 81215
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 tggtggcggcgtcggcgagat 198 ||||||||||||||||||||| Sbjct: 594580 tggtggcggcgtcggcgagat 594600
>gb|AY360059.2| Trichophyton verrucosum 70 kDa heat shock protein (HSP70) gene, complete cds Length = 2080 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 ccggtgccggtgctggtggcg 185 ||||||||||||||||||||| Sbjct: 1932 ccggtgccggtgctggtggcg 1952
>gb|AC140375.2| Mus musculus BAC clone RP23-183J2 from chromosome 19, complete sequence Length = 198254 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 gcgctcctgctgctggccctg 136 ||||||||||||||||||||| Sbjct: 132087 gcgctcctgctgctggccctg 132107
>ref|XM_751620.1| Ustilago maydis 521 hypothetical protein (UM00566.1) partial mRNA Length = 8562 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 ctgccggtgccggtgctggtg 182 ||||||||||||||||||||| Sbjct: 5948 ctgccggtgccggtgctggtg 5968
>gb|AE011897.1| Xanthomonas axonopodis pv. citri str. 306, section 275 of 469 of the complete genome Length = 12531 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 159 ccactgccggtgccggtgctggtggcggc 187 ||||||||||||||||||| |||| |||| Sbjct: 9091 ccactgccggtgccggtgccggtgccggc 9119
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11 Length = 79133 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtggcggc 187 |||||||||||||| |||||||||| Sbjct: 78706 tgccggtgccggtggtggtggcggc 78682
>emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosmid contig 15E6 Length = 61843 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtggcggc 187 |||||||||||||| |||||||||| Sbjct: 7900 tgccggtgccggtggtggtggcggc 7876
>gb|L28093.1|WHTCOREG Triticum aestivum pTACR7 (tacr7) mRNA, partial cds Length = 292 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 atggcaaagcggctcgccgtcgcgctcct 123 ||||||||| | ||||||||||||||||| Sbjct: 50 atggcaaagagtctcgccgtcgcgctcct 78
>gb|AF540993.1| Pseudomonas aeruginosa isolate 2-164 pyoverdin biosynthetic locus, partial sequence Length = 77740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cctgctgctggccctgctcgc 141 ||||||||||||||||||||| Sbjct: 73634 cctgctgctggccctgctcgc 73654
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ctgctgctggccctgctcgcg 142 ||||||||||||||||||||| Sbjct: 8210 ctgctgctggccctgctcgcg 8230
>ref|XM_955833.1| Neurospora crassa OR74A hypothetical protein (NCU01369.1) partial mRNA Length = 2064 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtggcggc 187 |||||||||||||| |||||||||| Sbjct: 360 tgccggtgccggtggtggtggcggc 384
>gb|AF069331.2|AF069331 Hordeum vulgare clone BLTI-5 low temperature induced protein mRNA, complete cds Length = 546 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 atggcaaagcggctcgccgtcgcgctcct 123 ||||||||| | ||||||||||||||||| Sbjct: 101 atggcaaagtgcctcgccgtcgcgctcct 129
>gb|AF164961.1|AF164961 Streptomyces fradiae strain T#2717 urdamycin biosynthetic gene cluster, partial sequence Length = 11790 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 ctgctgctggccctgctcgcg 142 ||||||||||||||||||||| Sbjct: 6841 ctgctgctggccctgctcgcg 6821
>emb|Z23257.1|SCRLT141A S.cereale RLT1412 mRNA, complete CDS Length = 525 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 95 atggcaaagcggctcgccgtcgcgctcctgctgctgg 131 ||||||||| | ||||||| |||||||||||| |||| Sbjct: 46 atggcaaagtgtctcgccgccgcgctcctgctactgg 82
>gb|AF052391.1|AF052391 Trichophyton rubrum heat shock protein 70 (HSP70) mRNA, complete cds Length = 2458 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 ccggtgccggtgctggtggcg 185 ||||||||||||||||||||| Sbjct: 2076 ccggtgccggtgctggtggcg 2096
>emb|Y14061.1|HVY14061 Hordeum vulgare mRNA for a cold-regulated protein Length = 484 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 atggcaaagcggctcgccgtcgcgctcct 123 ||||||||| | ||||||||||||||||| Sbjct: 24 atggcaaagtgcctcgccgtcgcgctcct 52
>emb|AJ430619.1|TME430619 Trichophyton mentagrophytes partial hsp70 gene for heat shock protein 70, exon 3, strain CBS 432.54 Length = 395 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 ccggtgccggtgctggtggcg 185 ||||||||||||||||||||| Sbjct: 41 ccggtgccggtgctggtggcg 61
>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1, aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds Length = 64957 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 164 gccggtgccggtgctggtggcggcgtcggcgag 196 |||||||||||||| |||| ||| ||||||||| Sbjct: 37681 gccggtgccggtgccggtgccggtgtcggcgag 37649
>emb|CT836532.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN022D24, full insert sequence Length = 1037 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ccgtcgcgctcctgctgctg 130 |||||||||||||||||||| Sbjct: 718 ccgtcgcgctcctgctgctg 699
>dbj|AB255875.1| Pongo pygmaeus MAOA gene, promoter region, alele: Pp-3 Length = 1194 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 62 tgccggtgccggtgctggtg 43
>ref|NM_001068421.1| Oryza sativa (japonica cultivar-group) Os08g0436100 (Os08g0436100) mRNA, complete cds Length = 2051 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tcgccgtcgcgctcctgctgctgg 131 |||||||||||||||| ||||||| Sbjct: 298 tcgccgtcgcgctcctcctgctgg 321
>ref|NM_001067324.1| Oryza sativa (japonica cultivar-group) Os08g0106000 (Os08g0106000) mRNA, complete cds Length = 1572 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ccgtcgcgctcctgctgctg 130 |||||||||||||||||||| Sbjct: 71 ccgtcgcgctcctgctgctg 90
>ref|NM_001066392.1| Oryza sativa (japonica cultivar-group) Os07g0533600 (Os07g0533600) mRNA, complete cds Length = 1530 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggtgccggtgctggtggcg 185 |||||||||||||||||||| Sbjct: 279 cggtgccggtgctggtggcg 298
>ref|NM_001063869.1| Oryza sativa (japonica cultivar-group) Os06g0264300 (Os06g0264300) mRNA, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 976 tgccggtgccggtgctggtg 995
>ref|NM_001050860.1| Oryza sativa (japonica cultivar-group) Os01g0762000 (Os01g0762000) mRNA, partial cds Length = 3190 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cgccgtcgcgctcctgctgc 128 |||||||||||||||||||| Sbjct: 408 cgccgtcgcgctcctgctgc 427
>ref|NM_001049541.1| Oryza sativa (japonica cultivar-group) Os01g0356900 (Os01g0356900) mRNA, complete cds Length = 1799 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ccggtgctggtggcggcgtcggcg 194 |||||||||||||||||| ||||| Sbjct: 1363 ccggtgctggtggcggcggcggcg 1340
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 actgccggtgccggtgctgg 180 |||||||||||||||||||| Sbjct: 2512194 actgccggtgccggtgctgg 2512213
>ref|XM_001083531.1| PREDICTED: Macaca mulatta similar to integrin, alpha 11 precursor (LOC694090), mRNA Length = 4976 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctcctgctgctggccctgct 138 |||||||||||||||||||| Sbjct: 3545 ctcctgctgctggccctgct 3564
>gb|CP000377.1| Silicibacter sp. TM1040, complete genome Length = 3200938 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ggctcgccgtcgcgctcctg 124 |||||||||||||||||||| Sbjct: 34972 ggctcgccgtcgcgctcctg 34991
>gb|AY995234.1| Rattus norvegicus selenoprotein T (Selt) mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 75 tgctggtggcggcgtcggcg 94
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tgctgctggccctgctcgcg 142 |||||||||||||||||||| Sbjct: 143840 tgctgctggccctgctcgcg 143821
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 actgccggtgccggtgctgg 180 |||||||||||||||||||| Sbjct: 889981 actgccggtgccggtgctgg 890000
>gb|DQ213306.1| Taeniopygia guttata clone 0061P0024G12 mitochondrial ribosomal protein S16-like mRNA, complete sequence Length = 1306 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 429 tgccggtgccggtgctggtg 410
>gb|AY615802.1| Pongo pygmaeus monoamine oxidase A (MAOA) gene, promoter region Length = 143 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 73 tgccggtgccggtgctggtg 54
>gb|AC118932.7| Mus musculus chromosome 5, clone RP24-147H20, complete sequence Length = 168156 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agacacagctacacaagagtcaag 41 ||||||||||||||| |||||||| Sbjct: 141989 agacacagctacacatgagtcaag 141966
>ref|XM_425348.1| PREDICTED: Gallus gallus hypothetical LOC427777 (LOC427777), mRNA Length = 1101 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctcctgctgctggccctgct 138 |||||||||||||||||||| Sbjct: 997 ctcctgctgctggccctgct 1016
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ggtgctggtggcggcgtcggcgag 196 |||||||||||||||| ||||||| Sbjct: 116835 ggtgctggtggcggcggcggcgag 116812
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 104604 tgccggtgccggtgctggtg 104623
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 2134667 tgccggtgccggtgctggtg 2134686
>ref|XM_712003.1| Candida albicans SC5314 putative bud site selection protein (CaO19_5292), mRNA Length = 2868 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 1614 tgccggtgccggtgctggtg 1633
>ref|XM_711922.1| Candida albicans SC5314 putative bud site selection protein (CaO19_12750), mRNA Length = 2868 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 1614 tgccggtgccggtgctggtg 1633
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agcggctcgccgtcgcgctc 121 |||||||||||||||||||| Sbjct: 23188 agcggctcgccgtcgcgctc 23169
>gb|AC157928.4| Mus musculus chromosome 5, clone RP24-119I9, complete sequence Length = 157594 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agacacagctacacaagagtcaag 41 ||||||||||||||| |||||||| Sbjct: 40796 agacacagctacacatgagtcaag 40773
>gb|AC146249.2| Pan troglodytes BAC clone CH251-140O11 from Y, complete sequence Length = 173078 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tgtgtatttcctttcatttc 496 |||||||||||||||||||| Sbjct: 88802 tgtgtatttcctttcatttc 88821
>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence Length = 89884 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 58286 tgccggtgccggtgctggtg 58305
>ref|XM_535527.2| PREDICTED: Canis familiaris similar to integrin, alpha 11 precursor (LOC478353), mRNA Length = 3552 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctcctgctgctggccctgct 138 |||||||||||||||||||| Sbjct: 3442 ctcctgctgctggccctgct 3461
>ref|XM_849419.1| PREDICTED: Canis familiaris similar to selenoprotein T (LOC612992), mRNA Length = 2091 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 105 tgctggtggcggcgtcggcg 124
>ref|XM_534307.2| PREDICTED: Canis familiaris similar to Selenoprotein T precursor (LOC477113), mRNA Length = 2069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 83 tgctggtggcggcgtcggcg 102
>gb|BC019970.1| Mus musculus RIKEN cDNA 2810407C02 gene, mRNA (cDNA clone MGC:28960 IMAGE:4458171), complete cds Length = 972 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 47 tgctggtggcggcgtcggcg 66
>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence Length = 154235 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gcgctcctgctgctggccctgctc 139 ||||||||||| |||||||||||| Sbjct: 125198 gcgctcctgctcctggccctgctc 125221
>gb|AF529313.1| Lobochlamys culleus clone CC-1 cytochrome oxidase subunit I (cox1) mitochondrial pseudogene, partial sequence Length = 1013 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 cggtgccggtgctggtggcggcgt 189 ||||||||||||||| |||||||| Sbjct: 323 cggtgccggtgctggcggcggcgt 346
>dbj|AB228921.1| Aspergillus oryzae cDNA, contig sequence: AoEST5798 Length = 756 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gccgtcgcgctcctgctgct 129 |||||||||||||||||||| Sbjct: 560 gccgtcgcgctcctgctgct 579
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gccgtcgcgctcctgctgct 129 |||||||||||||||||||| Sbjct: 1982261 gccgtcgcgctcctgctgct 1982280
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cctgctgctggccctgctcg 140 |||||||||||||||||||| Sbjct: 3282717 cctgctgctggccctgctcg 3282736 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtggcgg 186 ||||||||||||||| |||||||| Sbjct: 3946847 tgccggtgccggtgccggtggcgg 3946824
>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence Length = 215502 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 108915 tgccggtgccggtgctggtg 108934
>dbj|AK146778.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920054H06 product:Similar to selenoprotein T (2810407C02Rik protein) homolog [Mus musculus], full insert sequence Length = 3025 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 43 tgctggtggcggcgtcggcg 62
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgccggtgctggtggcggcg 188 |||||||||||||||||||| Sbjct: 3571448 tgccggtgctggtggcggcg 3571467 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gccggtgctggtggcggcgtcggc 193 ||||||||||||||||||| |||| Sbjct: 3849038 gccggtgctggtggcggcgacggc 3849015
>dbj|AK032838.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720460L05 product:Selenoprotein T homolog [Homo sapiens], full insert sequence Length = 3111 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 76 tgctggtggcggcgtcggcg 95
>dbj|AK013022.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407C02 product:Selenoprotein T homolog [Homo sapiens], full insert sequence Length = 1179 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 63 tgctggtggcggcgtcggcg 82
>gb|AC044782.6| Homo sapiens chromosome 10 clone RP11-170M17, complete sequence Length = 149041 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 ttcatttcagttaagctgtc 508 |||||||||||||||||||| Sbjct: 78182 ttcatttcagttaagctgtc 78201
>ref|NM_001040396.1| Mus musculus RIKEN cDNA 2810407C02 gene (2810407C02Rik), mRNA dbj|AK047958.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130023K05 product:Selenoprotein T homolog [Homo sapiens], full insert sequence Length = 3113 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 77 tgctggtggcggcgtcggcg 96
>dbj|AK017528.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730408P04 product:hypothetical protein, full insert sequence Length = 741 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 78 tgctggtggcggcgtcggcg 97
>gb|AC069543.5| Homo sapiens chromosome 10 clone RP11-393H5, complete sequence Length = 179789 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ttcatttcagttaagctgtc 508 |||||||||||||||||||| Sbjct: 129144 ttcatttcagttaagctgtc 129125
>emb|CR697755.2|CNS0G1C7 Tetraodon nigroviridis full-length cDNA Length = 718 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 gggtgccactgccggtgccggtgctggt 181 ||||||| ||||||||||||||||||| Sbjct: 145 gggtgccggtgccggtgccggtgctggt 118
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ccgtcgcgctcctgctgctg 130 |||||||||||||||||||| Sbjct: 301934 ccgtcgcgctcctgctgctg 301953 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tcgccgtcgcgctcctgctgctgg 131 |||||||||||||||| ||||||| Sbjct: 21183281 tcgccgtcgcgctcctcctgctgg 21183304
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggtgctggtggcggcgtcgg 192 |||||||||||||||||||| Sbjct: 14998435 ggtgctggtggcggcgtcgg 14998454 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgccggtgctggtggcg 185 |||||||||||||||||||| Sbjct: 20874524 cggtgccggtgctggtggcg 20874505
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 8736154 tgccggtgccggtgctggtg 8736173 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 gccggtgccggtgctggtggcggc 187 ||||||||||||| |||||||||| Sbjct: 25401875 gccggtgccggtgttggtggcggc 25401898
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agcggctcgccgtcgcgctc 121 |||||||||||||||||||| Sbjct: 25080533 agcggctcgccgtcgcgctc 25080514
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ggtgctggtggcggcgtcggcgag 196 |||||||||||||||| ||||||| Sbjct: 23273382 ggtgctggtggcggcggcggcgag 23273359
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 ccggtgctggtggcggcgtcggcg 194 |||||||||||||||||| ||||| Sbjct: 14421205 ccggtgctggtggcggcggcggcg 14421228 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cgccgtcgcgctcctgctgc 128 |||||||||||||||||||| Sbjct: 32055680 cgccgtcgcgctcctgctgc 32055661
>gb|AC097674.6| Rattus norvegicus 2 CH230-75D18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227596 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 188593 tgccggtgccggtgctggtg 188574
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cgccgtcgcgctcctgctgc 128 |||||||||||||||||||| Sbjct: 97494 cgccgtcgcgctcctgctgc 97475
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 114 tcgcgctcctgctgctggccctgctcgc 141 |||||||||||||||| || |||||||| Sbjct: 3028096 tcgcgctcctgctgctcgcgctgctcgc 3028069
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 cggtgctggtggcggcgtcggcga 195 |||||||||||||||| ||||||| Sbjct: 1025664 cggtgctggtggcggcttcggcga 1025641
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcgcgctcctgctgctggcc 133 |||||||||||||||||||| Sbjct: 198172 tcgcgctcctgctgctggcc 198191
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcgcgctcctgctgctggcc 133 |||||||||||||||||||| Sbjct: 322217 tcgcgctcctgctgctggcc 322236
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctcctgctgctggccctgct 138 |||||||||||||||||||| Sbjct: 27834 ctcctgctgctggccctgct 27853
>emb|AJ579650.1|STE579650 Streptomyces tenebrarius tobramycin biosynthetic gene cluster, strain ATCC 17920 Length = 13802 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ggtgccggtgctggtggcgg 186 |||||||||||||||||||| Sbjct: 10380 ggtgccggtgctggtggcgg 10361
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgccggtgctggtggcg 185 |||||||||||||||||||| Sbjct: 85314 cggtgccggtgctggtggcg 85295
>gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, complete sequence Length = 183408 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgctggtggcggcgtcggcg 194 |||||||||||||||||||| Sbjct: 54234 tgctggtggcggcgtcggcg 54253
>ref|NM_001017483.1| Rattus norvegicus similar to RIKEN cDNA 4930563D23 (LOC498063), mRNA gb|BC083887.1| Rattus norvegicus similar to RIKEN cDNA 4930563D23, mRNA (cDNA clone MGC:95204 IMAGE:7132136), complete cds Length = 2606 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gctcctgctgctggccctgc 137 |||||||||||||||||||| Sbjct: 2456 gctcctgctgctggccctgc 2437
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtggcgg 186 ||||||||||||||| |||||||| Sbjct: 227025 tgccggtgccggtgccggtggcgg 227048
>gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186864 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gctcctgctgctggccctgc 137 |||||||||||||||||||| Sbjct: 124253 gctcctgctgctggccctgc 124272
>gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, complete sequence Length = 182236 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gtgtgtatttcctttcagtc 528 |||||||||||||||||||| Sbjct: 134579 gtgtgtatttcctttcagtc 134598
>gb|AF172851.1|AF172851 Chromobacterium violaceum violacein biosynthetic gene cluster, complete sequence Length = 10094 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 cgccgtcgcgctcctgctgctggccctg 136 ||||||||||| || ||||||||||||| Sbjct: 5217 cgccgtcgcgcacccgctgctggccctg 5190
>gb|AC012502.3|AC012502 Homo sapiens BAC clone RP11-461H6 from Y, complete sequence Length = 113799 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tgtgtatttcctttcatttc 496 |||||||||||||||||||| Sbjct: 106938 tgtgtatttcctttcatttc 106957
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gctccggtggccgggctgccggtgcccg 230 ||||||||||||| ||| |||||||||| Sbjct: 102219 gctccggtggccgtgctcccggtgcccg 102192
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 6475 tgccggtgccggtgctggtg 6494
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 151136 tgccggtgccggtgctggtg 151155
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 ccggtgctggtggcggcgtcggcg 194 |||||||||||||||||| ||||| Sbjct: 82602 ccggtgctggtggcggcggcggcg 82625
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 gccggtgccggtgctggtggcggc 187 ||||||||||||| |||||||||| Sbjct: 75884 gccggtgccggtgttggtggcggc 75907
>gb|AC093274.4| Homo sapiens chromosome 5 clone RP11-374A4, complete sequence Length = 186608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 gtgtgtatttcctttcagtc 528 |||||||||||||||||||| Sbjct: 111151 gtgtgtatttcctttcagtc 111132
>dbj|BS000619.1| Pan troglodytes chromosome Y clone:PTB-493L21, complete sequences Length = 161970 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tgtgtatttcctttcatttc 496 |||||||||||||||||||| Sbjct: 135245 tgtgtatttcctttcatttc 135264
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggtgctggtggcggcgtcgg 192 |||||||||||||||||||| Sbjct: 4339 ggtgctggtggcggcgtcgg 4358
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggtgctggtggcggcgtcgg 192 |||||||||||||||||||| Sbjct: 138605 ggtgctggtggcggcgtcgg 138624
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgccggtgctggtggcg 185 |||||||||||||||||||| Sbjct: 2439 cggtgccggtgctggtggcg 2420
>dbj|BS000603.1| Pan troglodytes chromosome Y clone:PTB-616H14, complete sequences Length = 133913 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tgtgtatttcctttcatttc 496 |||||||||||||||||||| Sbjct: 109632 tgtgtatttcctttcatttc 109651
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ccgtcgcgctcctgctgctg 130 |||||||||||||||||||| Sbjct: 11448 ccgtcgcgctcctgctgctg 11467
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tcgccgtcgcgctcctgctgctgg 131 |||||||||||||||| ||||||| Sbjct: 9558 tcgccgtcgcgctcctcctgctgg 9581
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ccgtcgcgctcctgctgctg 130 |||||||||||||||||||| Sbjct: 68360 ccgtcgcgctcctgctgctg 68379
>dbj|AB111058.1| Allium cepa ALL1 gene for alliinase-like, complete cds Length = 35243 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 gctcaagcgtctgtaccgactatc 470 |||||||||| ||||||||||||| Sbjct: 17386 gctcaagcgtgtgtaccgactatc 17363
>dbj|AK120818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015D20, full insert sequence Length = 3191 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cgccgtcgcgctcctgctgc 128 |||||||||||||||||||| Sbjct: 409 cgccgtcgcgctcctgctgc 428
>dbj|AK109794.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E01, full insert sequence Length = 1532 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggtgccggtgctggtggcg 185 |||||||||||||||||||| Sbjct: 281 cggtgccggtgctggtggcg 300
>dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029B07, full insert sequence Length = 1629 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 977 tgccggtgccggtgctggtg 996
>dbj|AK065062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J16, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tcgccgtcgcgctcctgctgctgg 131 |||||||||||||||| ||||||| Sbjct: 299 tcgccgtcgcgctcctcctgctgg 322
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ccggtgctggtggcggcgtcggcg 194 |||||||||||||||||| ||||| Sbjct: 1363 ccggtgctggtggcggcggcggcg 1340
>dbj|AK062241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E09, full insert sequence Length = 726 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 74 tgccggtgccggtgctggtg 93
>dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C08, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 942 tgccggtgccggtgctggtg 961
>emb|AJ132439.1|TAE132439 Triticum aestivum mRNA for protein encoded by lt1.1 gene, partial Length = 416 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggtgctggtggcggcgtcggcgag 196 ||||| |||||||||||||||||| Sbjct: 51 ggtgcgggtggcggcgtcggcgag 74
>dbj|AP000871.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-709J7, complete sequence Length = 199118 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 catgatcatctatctaccta 346 |||||||||||||||||||| Sbjct: 125053 catgatcatctatctaccta 125072
>dbj|AP002453.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-801G16, complete sequence Length = 211345 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 catgatcatctatctaccta 346 |||||||||||||||||||| Sbjct: 5151 catgatcatctatctaccta 5170
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete sequence Length = 196552 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 8299 tgccggtgccggtgctggtg 8280
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctgctgctggccctgctcgc 141 |||||||||||||||||||| Sbjct: 945902 ctgctgctggccctgctcgc 945883 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 cgccgtcgcgctcctgctgctggccctg 136 ||||||||||| || ||||||||||||| Sbjct: 3563040 cgccgtcgcgcacccgctgctggccctg 3563067 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tcgccgtcgcgctcctgctgctgg 131 ||||||||||||| |||||||||| Sbjct: 4139467 tcgccgtcgcgctgctgctgctgg 4139490
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgccggtgccggtgctggtg 182 |||||||||||||||||||| Sbjct: 553184 tgccggtgccggtgctggtg 553203
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ggtgctggtggcggcgtcgg 192 |||||||||||||||||||| Sbjct: 2678322 ggtgctggtggcggcgtcgg 2678303
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region Length = 43220 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ggtgccggtgctggtggcgg 186 |||||||||||||||||||| Sbjct: 21191 ggtgccggtgctggtggcgg 21210
>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940126D9, complete sequence Length = 125236 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 tccggtggccgggctgccgg 224 |||||||||||||||||||| Sbjct: 58480 tccggtggccgggctgccgg 58461
>dbj|AB032799.1| Chromobacterium violaceum violacein biosynthetic gene cluster (vio A, vio B, vio C, vio D), complete cds Length = 9077 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 cgccgtcgcgctcctgctgctggccctg 136 ||||||||||| || ||||||||||||| Sbjct: 3800 cgccgtcgcgcacccgctgctggccctg 3773
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cgccgtcgcgctcctgctgc 128 |||||||||||||||||||| Sbjct: 152407 cgccgtcgcgctcctgctgc 152388 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 87,439,901 Number of extensions: 4591171 Number of successful extensions: 115896 Number of sequences better than 10.0: 148 Number of HSP's gapped: 115889 Number of HSP's successfully gapped: 170 Length of query: 605 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 583 Effective length of database: 18,508,616,841 Effective search space: 10790523618303 Effective search space used: 10790523618303 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
