ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63i21 |
|---|---|
| Clone Library Name | barley_pub |
>P49100:CYB5_ORYSJ Cytochrome b5 - Oryza sativa subsp. japonica (Rice)| Length = 137 Score = 42.0 bits (97), Expect = 0.017 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = +2 Query: 731 LEEVSKYNSKDGCWLIIVGKVY 796 LEEV+K+NSKD CWLII GKVY Sbjct: 11 LEEVAKHNSKDDCWLIIGGKVY 32
>Q42342:CYB51_ARATH Cytochrome b5 isoform 1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 134 Score = 36.6 bits (83), Expect = 0.71 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = +2 Query: 719 EALILEEVSKYNSKDGCWLIIVGKVY 796 + L EEVSK+N CWLII GKVY Sbjct: 6 KVLSFEEVSKHNKTKDCWLIISGKVY 31
>P40934:CYB5_BRAOB Cytochrome b5 - Brassica oleracea var. botrytis (Cauliflower)| Length = 134 Score = 34.3 bits (77), Expect = 3.5 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 719 EALILEEVSKYNSKDGCWLIIVGKVY 796 + L EEVS++N CWLII GKVY Sbjct: 6 KVLGFEEVSQHNKTKDCWLIISGKVY 31
>Q8NWT5:OPPD2_STAAW Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain MW2) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q6G9I0:OPPD2_STAAS Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain MSSA476) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q6GH27:OPPD2_STAAR Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain MRSA252) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q7A5Q8:OPPD2_STAAN Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain N315) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q99UA2:OPPD2_STAAM Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain Mu50 / ATCC 700699) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q5HG40:OPPD2_STAAC Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain COL) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q2FYQ7:OPPD2_STAA8 Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain NCTC 8325) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>Q2FH57:OPPD2_STAA3 Putative oligopeptide transport ATP-binding protein oppD2 -| Staphylococcus aureus (strain USA300) Length = 257 Score = 33.9 bits (76), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 1624 HVLMLSPQVIFYILINEP*LLNRCHFILVKRKLKNLIFPIQINNLNHFRYRWTHVYLEQK 1803 H+++ Q +F I N +L C +I V ++ + I+ N+NHF+Y H Y E+ Sbjct: 189 HIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQI----IERGNINHFKYEHLHPYTERL 244 Query: 1804 RYTRT 1818 RT Sbjct: 245 IKYRT 249
>P49099:CYB5S_TOBAC Cytochrome b5, seed isoform - Nicotiana tabacum (Common tobacco)| Length = 135 Score = 33.5 bits (75), Expect = 6.1 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 713 RDEALILEEVSKYNSKDGCWLIIVGKVY 796 + + L EVS +N+ CWLII GKVY Sbjct: 4 QSKVFTLAEVSNHNNAKDCWLIISGKVY 31
>O48845:CYB52_ARATH Probable cytochrome b5 isoform 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 134 Score = 33.5 bits (75), Expect = 6.1 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 2/29 (6%) Frame = +2 Query: 716 DEALI--LEEVSKYNSKDGCWLIIVGKVY 796 DEA I L EVS++N CW++I GKVY Sbjct: 3 DEAKIFTLSEVSEHNQAHDCWIVINGKVY 31
>Q9V780:LAP1_DROME Protein lap1 - Drosophila melanogaster (Fruit fly)| Length = 849 Score = 33.1 bits (74), Expect = 7.9 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Frame = +3 Query: 216 SNARAQPSPA-ARFRGAT*SPPPTFHCGASQILESPTPTLHQLLGFLHRRCRRHPPDLRP 392 SNA+AQP+P F A +P P G+ +++ SPTP +L R+ +R Sbjct: 467 SNAKAQPAPNYPSFVAAPPTPTPDQMAGSVRLMRSPTPYPKEL--------RQMSKYVRQ 518 Query: 393 PESLLSSGRWFEIRLAR 443 ++ SS E+R AR Sbjct: 519 AQAATSSANASEVREAR 535
>P11035:NIA2_ARATH Nitrate reductase [NADH] 2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 917 Score = 33.1 bits (74), Expect = 7.9 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 731 LEEVSKYNSKDGCWLIIVGKVY 796 + EV K+NS D CW+I+ G +Y Sbjct: 547 MSEVKKHNSADSCWIIVHGHIY 568
>P49098:CYB5_TOBAC Cytochrome b5 - Nicotiana tabacum (Common tobacco)| Length = 136 Score = 33.1 bits (74), Expect = 7.9 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +2 Query: 731 LEEVSKYNSKDGCWLIIVGKVY 796 L EVS++N+ CWL+I GKVY Sbjct: 10 LAEVSQHNNAKDCWLVISGKVY 31 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 585,172,297 Number of extensions: 13212802 Number of successful extensions: 30790 Number of sequences better than 10.0: 16 Number of HSP's gapped: 30684 Number of HSP's successfully gapped: 16 Length of query: 1115 Length of database: 100,686,439 Length adjustment: 124 Effective length of query: 991 Effective length of database: 66,673,859 Effective search space: 66073794269 Effective search space used: 66073794269 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
