ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61d21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073569.1| Oryza sativa (japonica cultivar-group) Os12g0563500 (Os12g0563500) mRNA, complete cds Length = 1908 Score = 1181 bits (596), Expect = 0.0 Identities = 1142/1324 (86%) Strand = Plus / Plus Query: 199 ttgatgttggccagccaacacccagatctcatcccgagttattagctgatgaggagatta 258 ||||||||||||| ||||||||| |||||||||| |||||||||||||| | ||||||| Sbjct: 187 ttgatgttggccaaccaacaccccgatctcatcctgagttattagctgaaggagagatta 246 Query: 259 caccaggcatcacaagtgaggagtacatatgtagaagaaaaaagcttctggatgctttac 318 ||||||| ||||| || || |||||||| | ||||||||||||||| |||| | | | | Sbjct: 247 caccaggtatcactagcgatgagtacatcttcagaagaaaaaagcttttggaggttctgc 306 Query: 319 cagataagagcttggccataattgcatctgcagatcagcagatgatgactgatatagtgc 378 |||| |||||||||||||| ||||| || ||||| |||||||||||||||||| |||||| Sbjct: 307 cagagaagagcttggccattattgcgtccgcagagcagcagatgatgactgatgtagtgc 366 Query: 379 cgtactccttcagacagaatggtgattacctgtacattacaggttgtacgcaacctggtg 438 | ||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||| Sbjct: 367 catactcattcagacagaatggtgattacctgtatattacaggttgtgcacaacctggtg 426 Query: 439 gtgtagcagttttaagtaaggaaactggtttatgtatgttcatgccagataaacacaagg 498 |||| |||||||||||| ||||||||||| | ||||||||||||||||||| | |||| Sbjct: 427 gtgtggcagttttaagtgaggaaactggtctgtgtatgttcatgccagatacaagtaagg 486 Query: 499 aggatgtagtttgggaaggtccgactgctggagttgaagcagctgtcgatttcttcaagg 558 ||||||| || ||| |||||| ||| ||||||||||| ||||||| |||||||||| | Sbjct: 487 aggatgtggtctggcaaggtcagacagctggagttgaggcagctgagaatttcttcaaag 546 Query: 559 cagataaagcatttccacttagtgaaatgaaaaagatcctccccgaaatgattgagcaat 618 | || |||||||||||||||||||| ||| |||||||||| || ||||||||||||| | Sbjct: 547 cggacaaagcatttccacttagtgagatgcaaaagatccttcctgaaatgattgagcggt 606 Query: 619 caaaagtggtgtatcacaatgtaaaggcatccacatcttcttataggaactttgatgcct 678 |||||||||| ||||||||||||||| || | | ||||||| |||||| ||| ||| Sbjct: 607 caaaagtggtatatcacaatgtaaagacactttcgccatcttataagaacttggattcct 666 Query: 679 tccgcagggcatcactcaacaataaagtaaaagatcttgcacattacactgatgaactgc 738 | || |||||||||||||| ||||||||||||||| ||||| | |||||||||||||||| Sbjct: 667 ttcgtagggcatcactcaataataaagtaaaagatattgcatactacactgatgaactgc 726 Query: 739 ggtggatcaagtcaaaatcggaaatcaagttgatgagggagtcagcatctattgtttctc 798 ||||||||||||||||||| ||||| ||||||| | || ||||||||||||||||||| Sbjct: 727 ggtggatcaagtcaaaatcagaaattgggttgatgcgagaatcagcatctattgtttctc 786 Query: 799 agtctcttttgcagacaatgttgctctcaaggacccacagggaggaaagccagttagctg 858 |||||||||| || || |||||||| || |||||||| |||||||||||||| | || | Sbjct: 787 agtctcttttacaaacgatgttgctatctaggacccatagggaggaaagccaactggcag 846 Query: 859 ctaaaatagagtatgagtgcaaaatgagaggtgcccaaagaatggcgttccatcctgtag 918 |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 847 ctaagatcgagtatgagtgcaaaatgaggggtgcccaaagaatggcgttccatcctgtag 906 Query: 919 ttggtggtggagcaaatggcagtgttgtacattactcaagaaatgataagaagatcaact 978 ||||||||||||||||||||||||| |||| |||||||||||||| | | |||| Sbjct: 907 ttggtggtggagcaaatggcagtgtaatacactactcaagaaatgacggaagggtcaaag 966 Query: 979 cgggtgatcttgtcctcatggatgttggatgtgagtaccatggctaccttagtgacctga 1038 | ||||| || | |||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 967 caggtgaactactgctcatggatgttggctgtgagtatcatggctaccttagcgacctga 1026 Query: 1039 cgcggacatggccaccctgtggtagattttcagctgctcaggaagaactgtacagtttaa 1098 | || ||||||||||||||||| || |||||| |||||||||||||||| ||||| | | Sbjct: 1027 ctcgaacatggccaccctgtggcaggttttcacctgctcaggaagaactatacagcctga 1086 Query: 1099 tactggagacgaataaggaatgcataaagctttgtaaaccaggcacgagcattaaagaga 1158 |||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 1087 tactggagacaaataaggaatgcataaagctttgtaaaccaggcgcaagcattaacgaga 1146 Query: 1159 tacaccatcattcggtcaagatgttgataagtggattccaagaactcggaattataggaa 1218 |||| |||||||||||||||||||||||| || ||||||||||| |||||| ||| | Sbjct: 1147 tacataatcattcggtcaagatgttgataaagggtttccaagaacttggaattttagaga 1206 Query: 1219 agggcaaatctatccaatacaattatttgaatccaacctcaataggtcattcgttgggaa 1278 |||| ||||| |||||||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 1207 aggggaaatccatccaatacaattatttgaatccaacagcaataggtcactcgttaggaa 1266 Query: 1279 tggatattcatgactccacgagcctcagcagcgacaaaaccttggagccaggcgttgtaa 1338 ||||||||||||| ||| | || |||| |||||| ||||||||||||| ||| ||| Sbjct: 1267 tggatattcatgattccgtcaagcttagcaaggacaaacccttggagccaggagttataa 1326 Query: 1339 taaccattgaaccggggatctacattcccccggtcccgatactcaatgagaaggccccgg 1398 |||| || || || ||| | ||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1327 taacgatcgagcccggggtttacatcccaccggtgccaatactgaaagagaacgccccag 1386 Query: 1399 acaggttccgtggcataggaataaggatcgaggacgaggtcctcatcaccgagtccggcc 1458 | |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1387 ataggtaccggggcatcggaattaggatcgaggacgaggtcctcatcaccgagtctggtc 1446 Query: 1459 acgaggtgttgacggcgtctgtgcccaaggagatcccccacctcaccaccctgatgaaca 1518 ||||||| |||||||||| ||||| ||||||||| | ||| | |||||||| ||||||| Sbjct: 1447 acgaggtcctgacggcgtcggtgccgaaggagatctctcacataaccacccttatgaaca 1506 Query: 1519 tggg 1522 |||| Sbjct: 1507 tggg 1510
>dbj|AK102247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088F06, full insert sequence Length = 1910 Score = 1181 bits (596), Expect = 0.0 Identities = 1142/1324 (86%) Strand = Plus / Plus Query: 199 ttgatgttggccagccaacacccagatctcatcccgagttattagctgatgaggagatta 258 ||||||||||||| ||||||||| |||||||||| |||||||||||||| | ||||||| Sbjct: 188 ttgatgttggccaaccaacaccccgatctcatcctgagttattagctgaaggagagatta 247 Query: 259 caccaggcatcacaagtgaggagtacatatgtagaagaaaaaagcttctggatgctttac 318 ||||||| ||||| || || |||||||| | ||||||||||||||| |||| | | | | Sbjct: 248 caccaggtatcactagcgatgagtacatcttcagaagaaaaaagcttttggaggttctgc 307 Query: 319 cagataagagcttggccataattgcatctgcagatcagcagatgatgactgatatagtgc 378 |||| |||||||||||||| ||||| || ||||| |||||||||||||||||| |||||| Sbjct: 308 cagagaagagcttggccattattgcgtccgcagagcagcagatgatgactgatgtagtgc 367 Query: 379 cgtactccttcagacagaatggtgattacctgtacattacaggttgtacgcaacctggtg 438 | ||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||| Sbjct: 368 catactcattcagacagaatggtgattacctgtatattacaggttgtgcacaacctggtg 427 Query: 439 gtgtagcagttttaagtaaggaaactggtttatgtatgttcatgccagataaacacaagg 498 |||| |||||||||||| ||||||||||| | ||||||||||||||||||| | |||| Sbjct: 428 gtgtggcagttttaagtgaggaaactggtctgtgtatgttcatgccagatacaagtaagg 487 Query: 499 aggatgtagtttgggaaggtccgactgctggagttgaagcagctgtcgatttcttcaagg 558 ||||||| || ||| |||||| ||| ||||||||||| ||||||| |||||||||| | Sbjct: 488 aggatgtggtctggcaaggtcagacagctggagttgaggcagctgagaatttcttcaaag 547 Query: 559 cagataaagcatttccacttagtgaaatgaaaaagatcctccccgaaatgattgagcaat 618 | || |||||||||||||||||||| ||| |||||||||| || ||||||||||||| | Sbjct: 548 cggacaaagcatttccacttagtgagatgcaaaagatccttcctgaaatgattgagcggt 607 Query: 619 caaaagtggtgtatcacaatgtaaaggcatccacatcttcttataggaactttgatgcct 678 |||||||||| ||||||||||||||| || | | ||||||| |||||| ||| ||| Sbjct: 608 caaaagtggtatatcacaatgtaaagacactttcgccatcttataagaacttggattcct 667 Query: 679 tccgcagggcatcactcaacaataaagtaaaagatcttgcacattacactgatgaactgc 738 | || |||||||||||||| ||||||||||||||| ||||| | |||||||||||||||| Sbjct: 668 ttcgtagggcatcactcaataataaagtaaaagatattgcatactacactgatgaactgc 727 Query: 739 ggtggatcaagtcaaaatcggaaatcaagttgatgagggagtcagcatctattgtttctc 798 ||||||||||||||||||| ||||| ||||||| | || ||||||||||||||||||| Sbjct: 728 ggtggatcaagtcaaaatcagaaattgggttgatgcgagaatcagcatctattgtttctc 787 Query: 799 agtctcttttgcagacaatgttgctctcaaggacccacagggaggaaagccagttagctg 858 |||||||||| || || |||||||| || |||||||| |||||||||||||| | || | Sbjct: 788 agtctcttttacaaacgatgttgctatctaggacccatagggaggaaagccaactggcag 847 Query: 859 ctaaaatagagtatgagtgcaaaatgagaggtgcccaaagaatggcgttccatcctgtag 918 |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 848 ctaagatcgagtatgagtgcaaaatgaggggtgcccaaagaatggcgttccatcctgtag 907 Query: 919 ttggtggtggagcaaatggcagtgttgtacattactcaagaaatgataagaagatcaact 978 ||||||||||||||||||||||||| |||| |||||||||||||| | | |||| Sbjct: 908 ttggtggtggagcaaatggcagtgtaatacactactcaagaaatgacggaagggtcaaag 967 Query: 979 cgggtgatcttgtcctcatggatgttggatgtgagtaccatggctaccttagtgacctga 1038 | ||||| || | |||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 968 caggtgaactactgctcatggatgttggctgtgagtatcatggctaccttagcgacctga 1027 Query: 1039 cgcggacatggccaccctgtggtagattttcagctgctcaggaagaactgtacagtttaa 1098 | || ||||||||||||||||| || |||||| |||||||||||||||| ||||| | | Sbjct: 1028 ctcgaacatggccaccctgtggcaggttttcacctgctcaggaagaactatacagcctga 1087 Query: 1099 tactggagacgaataaggaatgcataaagctttgtaaaccaggcacgagcattaaagaga 1158 |||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 1088 tactggagacaaataaggaatgcataaagctttgtaaaccaggcgcaagcattaacgaga 1147 Query: 1159 tacaccatcattcggtcaagatgttgataagtggattccaagaactcggaattataggaa 1218 |||| |||||||||||||||||||||||| || ||||||||||| |||||| ||| | Sbjct: 1148 tacataatcattcggtcaagatgttgataaagggtttccaagaacttggaattttagaga 1207 Query: 1219 agggcaaatctatccaatacaattatttgaatccaacctcaataggtcattcgttgggaa 1278 |||| ||||| |||||||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 1208 aggggaaatccatccaatacaattatttgaatccaacagcaataggtcactcgttaggaa 1267 Query: 1279 tggatattcatgactccacgagcctcagcagcgacaaaaccttggagccaggcgttgtaa 1338 ||||||||||||| ||| | || |||| |||||| ||||||||||||| ||| ||| Sbjct: 1268 tggatattcatgattccgtcaagcttagcaaggacaaacccttggagccaggagttataa 1327 Query: 1339 taaccattgaaccggggatctacattcccccggtcccgatactcaatgagaaggccccgg 1398 |||| || || || ||| | ||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1328 taacgatcgagcccggggtttacatcccaccggtgccaatactgaaagagaacgccccag 1387 Query: 1399 acaggttccgtggcataggaataaggatcgaggacgaggtcctcatcaccgagtccggcc 1458 | |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1388 ataggtaccggggcatcggaattaggatcgaggacgaggtcctcatcaccgagtctggtc 1447 Query: 1459 acgaggtgttgacggcgtctgtgcccaaggagatcccccacctcaccaccctgatgaaca 1518 ||||||| |||||||||| ||||| ||||||||| | ||| | |||||||| ||||||| Sbjct: 1448 acgaggtcctgacggcgtcggtgccgaaggagatctctcacataaccacccttatgaaca 1507 Query: 1519 tggg 1522 |||| Sbjct: 1508 tggg 1511
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 268 bits (135), Expect = 7e-68 Identities = 225/255 (88%) Strand = Plus / Plus Query: 235 agttattagctgatgaggagattacaccaggcatcacaagtgaggagtacatatgtagaa 294 ||||||||||||| | |||||||||||||| ||||| || || |||||||| | |||| Sbjct: 23141815 agttattagctgaaggagagattacaccaggtatcactagcgatgagtacatcttcagaa 23141874 Query: 295 gaaaaaagcttctggatgctttaccagataagagcttggccataattgcatctgcagatc 354 ||||||||||| |||| | | | ||||| |||||||||||||| ||||| || ||||| | Sbjct: 23141875 gaaaaaagcttttggaggttctgccagagaagagcttggccattattgcgtccgcagagc 23141934 Query: 355 agcagatgatgactgatatagtgccgtactccttcagacagaatggtgattacctgtaca 414 ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 23141935 agcagatgatgactgatgtagtgccatactcattcagacagaatggtgattacctgtata 23141994 Query: 415 ttacaggttgtacgcaacctggtggtgtagcagttttaagtaaggaaactggtttatgta 474 ||||||||||| | |||||||||||||| |||||||||||| ||||||||||| | |||| Sbjct: 23141995 ttacaggttgtgcacaacctggtggtgtggcagttttaagtgaggaaactggtctgtgta 23142054 Query: 475 tgttcatgccagata 489 ||||||||||||||| Sbjct: 23142055 tgttcatgccagata 23142069 Score = 184 bits (93), Expect = 8e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 592 agatcctccccgaaatgattgagcaatcaaaagtggtgtatcacaatgtaaaggcatcca 651 ||||||| || ||||||||||||| ||||||||||| ||||||||||||||| || Sbjct: 23142379 agatccttcctgaaatgattgagcggtcaaaagtggtatatcacaatgtaaagacacttt 23142438 Query: 652 catcttcttataggaactttgatgccttccgcagggcatcactcaacaataaagtaaaag 711 | | ||||||| |||||| ||| |||| || |||||||||||||| ||||||||||||| Sbjct: 23142439 cgccatcttataagaacttggattcctttcgtagggcatcactcaataataaagtaaaag 23142498 Query: 712 atcttgcacattacactgatgaactgcggtggatcaagtcaaaatcggaaatcaagttga 771 || ||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 23142499 atattgcatactacactgatgaactgcggtggatcaagtcaaaatcagaaattgggttga 23142558 Query: 772 tgagggagtcagcatctattgtttctcag 800 || | || ||||||||||||||||||||| Sbjct: 23142559 tgcgagaatcagcatctattgtttctcag 23142587 Score = 115 bits (58), Expect = 6e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 1077 caggaagaactgtacagtttaatactggagacgaataaggaatgcataaagctttgtaaa 1136 ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 23143762 caggaagaactatacagcctgatactggagacaaataaggaatgcataaagctttgtaaa 23143821 Query: 1137 ccaggcacgagcattaaagagatacaccatcattcggt 1174 |||||| | |||||||| |||||||| |||||||||| Sbjct: 23143822 ccaggcgcaagcattaacgagatacataatcattcggt 23143859 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 798 cagtctcttttgcagacaatgttgctctcaaggacccacagggaggaaagccagttagct 857 ||||||||||| || || |||||||| || |||||||| |||||||||||||| | || Sbjct: 23143152 cagtctcttttacaaacgatgttgctatctaggacccatagggaggaaagccaactggca 23143211 Query: 858 gctaaaatagagtatgagtgcaaaatgagaggtgcccaaagaatggcgt 906 ||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 23143212 gctaagatcgagtatgagtgcaaaatgaggggtgcccaaagaatggcgt 23143260 Score = 111 bits (56), Expect = 9e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 993 ctcatggatgttggatgtgagtaccatggctaccttagtgacctgacgcggacatggcca 1052 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||||||| Sbjct: 23143597 ctcatggatgttggctgtgagtatcatggctaccttagcgacctgactcgaacatggcca 23143656 Query: 1053 ccctgtggtagattttcagctgctcagg 1080 |||||||| || |||||| ||||||||| Sbjct: 23143657 ccctgtggcaggttttcacctgctcagg 23143684 Score = 99.6 bits (50), Expect = 4e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 1172 ggtcaagatgttgataagtggattccaagaactcggaattataggaaagggcaaatctat 1231 ||||||||||||||||| || ||||||||||| |||||| ||| ||||| ||||| || Sbjct: 23143942 ggtcaagatgttgataaagggtttccaagaacttggaattttagagaaggggaaatccat 23144001 Query: 1232 ccaatacaattatttgaatccaacctcaataggt 1265 |||||||||||||||||||||||| |||||||| Sbjct: 23144002 ccaatacaattatttgaatccaacagcaataggt 23144035 Score = 95.6 bits (48), Expect = 6e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 905 gttccatcctgtagttggtggtggagcaaatggcagtgttgtacattactcaagaaatga 964 ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 23143436 gttccatcctgtagttggtggtggagcaaatggcagtgtaatacactactcaagaaatga 23143495 Score = 93.7 bits (47), Expect = 2e-15 Identities = 92/107 (85%) Strand = Plus / Plus Query: 1359 tacattcccccggtcccgatactcaatgagaaggccccggacaggttccgtggcatagga 1418 ||||| || ||||| || ||||| || ||||| ||||| || |||| ||| ||||| ||| Sbjct: 23144445 tacatcccaccggtgccaatactgaaagagaacgccccagataggtaccggggcatcgga 23144504 Query: 1419 ataaggatcgaggacgaggtcctcatcaccgagtccggccacgaggt 1465 || |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 23144505 attaggatcgaggacgaggtcctcatcaccgagtctggtcacgaggt 23144551 Score = 77.8 bits (39), Expect = 1e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 499 aggatgtagtttgggaaggtccgactgctggagttgaagcagctgtcgatttcttcaagg 558 ||||||| || ||| |||||| ||| ||||||||||| ||||||| |||||||||| | Sbjct: 23142157 aggatgtggtctggcaaggtcagacagctggagttgaggcagctgagaatttcttcaaag 23142216 Query: 559 cagataaagcatttccacttagtgaaatgaaaaag 593 | || |||||||||||||||||||| ||| ||||| Sbjct: 23142217 cggacaaagcatttccacttagtgagatgcaaaag 23142251 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1468 tgacggcgtctgtgcccaaggagatcccccacctcaccaccctgatgaacatggg 1522 |||||||||| ||||| ||||||||| | ||| | |||||||| ||||||||||| Sbjct: 23144663 tgacggcgtcggtgccgaaggagatctctcacataaccacccttatgaacatggg 23144717 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 199 ttgatgttggccagccaacacccagatctcatcc 232 ||||||||||||| ||||||||| |||||||||| Sbjct: 23140942 ttgatgttggccaaccaacaccccgatctcatcc 23140975 Score = 46.1 bits (23), Expect = 0.46 Identities = 62/75 (82%) Strand = Plus / Plus Query: 1262 aggtcattcgttgggaatggatattcatgactccacgagcctcagcagcgacaaaacctt 1321 |||||| ||||| ||||||||||||||||| ||| | || |||| |||||| |||| Sbjct: 23144121 aggtcactcgttaggaatggatattcatgattccgtcaagcttagcaaggacaaaccctt 23144180 Query: 1322 ggagccaggcgttgt 1336 ||||||||| ||||| Sbjct: 23144181 ggagccaggagttgt 23144195
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 268 bits (135), Expect = 7e-68 Identities = 225/255 (88%) Strand = Plus / Minus Query: 235 agttattagctgatgaggagattacaccaggcatcacaagtgaggagtacatatgtagaa 294 ||||||||||||| | |||||||||||||| ||||| || || |||||||| | |||| Sbjct: 36582 agttattagctgaaggagagattacaccaggtatcactagcgatgagtacatcttcagaa 36523 Query: 295 gaaaaaagcttctggatgctttaccagataagagcttggccataattgcatctgcagatc 354 ||||||||||| |||| | | | ||||| |||||||||||||| ||||| || ||||| | Sbjct: 36522 gaaaaaagcttttggaggttctgccagagaagagcttggccattattgcgtccgcagagc 36463 Query: 355 agcagatgatgactgatatagtgccgtactccttcagacagaatggtgattacctgtaca 414 ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 36462 agcagatgatgactgatgtagtgccatactcattcagacagaatggtgattacctgtata 36403 Query: 415 ttacaggttgtacgcaacctggtggtgtagcagttttaagtaaggaaactggtttatgta 474 ||||||||||| | |||||||||||||| |||||||||||| ||||||||||| | |||| Sbjct: 36402 ttacaggttgtgcacaacctggtggtgtggcagttttaagtgaggaaactggtctgtgta 36343 Query: 475 tgttcatgccagata 489 ||||||||||||||| Sbjct: 36342 tgttcatgccagata 36328 Score = 184 bits (93), Expect = 8e-43 Identities = 180/209 (86%) Strand = Plus / Minus Query: 592 agatcctccccgaaatgattgagcaatcaaaagtggtgtatcacaatgtaaaggcatcca 651 ||||||| || ||||||||||||| ||||||||||| ||||||||||||||| || Sbjct: 36018 agatccttcctgaaatgattgagcggtcaaaagtggtatatcacaatgtaaagacacttt 35959 Query: 652 catcttcttataggaactttgatgccttccgcagggcatcactcaacaataaagtaaaag 711 | | ||||||| |||||| ||| |||| || |||||||||||||| ||||||||||||| Sbjct: 35958 cgccatcttataagaacttggattcctttcgtagggcatcactcaataataaagtaaaag 35899 Query: 712 atcttgcacattacactgatgaactgcggtggatcaagtcaaaatcggaaatcaagttga 771 || ||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 35898 atattgcatactacactgatgaactgcggtggatcaagtcaaaatcagaaattgggttga 35839 Query: 772 tgagggagtcagcatctattgtttctcag 800 || | || ||||||||||||||||||||| Sbjct: 35838 tgcgagaatcagcatctattgtttctcag 35810 Score = 115 bits (58), Expect = 6e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 1077 caggaagaactgtacagtttaatactggagacgaataaggaatgcataaagctttgtaaa 1136 ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 34635 caggaagaactatacagcctgatactggagacaaataaggaatgcataaagctttgtaaa 34576 Query: 1137 ccaggcacgagcattaaagagatacaccatcattcggt 1174 |||||| | |||||||| |||||||| |||||||||| Sbjct: 34575 ccaggcgcaagcattaacgagatacataatcattcggt 34538 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 798 cagtctcttttgcagacaatgttgctctcaaggacccacagggaggaaagccagttagct 857 ||||||||||| || || |||||||| || |||||||| |||||||||||||| | || Sbjct: 35245 cagtctcttttacaaacgatgttgctatctaggacccatagggaggaaagccaactggca 35186 Query: 858 gctaaaatagagtatgagtgcaaaatgagaggtgcccaaagaatggcgt 906 ||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 35185 gctaagatcgagtatgagtgcaaaatgaggggtgcccaaagaatggcgt 35137 Score = 111 bits (56), Expect = 9e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 993 ctcatggatgttggatgtgagtaccatggctaccttagtgacctgacgcggacatggcca 1052 |||||||||||||| |||||||| |||||||||||||| |||||||| || ||||||||| Sbjct: 34800 ctcatggatgttggctgtgagtatcatggctaccttagcgacctgactcgaacatggcca 34741 Query: 1053 ccctgtggtagattttcagctgctcagg 1080 |||||||| || |||||| ||||||||| Sbjct: 34740 ccctgtggcaggttttcacctgctcagg 34713 Score = 99.6 bits (50), Expect = 4e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 1172 ggtcaagatgttgataagtggattccaagaactcggaattataggaaagggcaaatctat 1231 ||||||||||||||||| || ||||||||||| |||||| ||| ||||| ||||| || Sbjct: 34455 ggtcaagatgttgataaagggtttccaagaacttggaattttagagaaggggaaatccat 34396 Query: 1232 ccaatacaattatttgaatccaacctcaataggt 1265 |||||||||||||||||||||||| |||||||| Sbjct: 34395 ccaatacaattatttgaatccaacagcaataggt 34362 Score = 95.6 bits (48), Expect = 6e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 905 gttccatcctgtagttggtggtggagcaaatggcagtgttgtacattactcaagaaatga 964 ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 34961 gttccatcctgtagttggtggtggagcaaatggcagtgtaatacactactcaagaaatga 34902 Score = 93.7 bits (47), Expect = 2e-15 Identities = 92/107 (85%) Strand = Plus / Minus Query: 1359 tacattcccccggtcccgatactcaatgagaaggccccggacaggttccgtggcatagga 1418 ||||| || ||||| || ||||| || ||||| ||||| || |||| ||| ||||| ||| Sbjct: 33952 tacatcccaccggtgccaatactgaaagagaacgccccagataggtaccggggcatcgga 33893 Query: 1419 ataaggatcgaggacgaggtcctcatcaccgagtccggccacgaggt 1465 || |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 33892 attaggatcgaggacgaggtcctcatcaccgagtctggtcacgaggt 33846 Score = 77.8 bits (39), Expect = 1e-10 Identities = 81/95 (85%) Strand = Plus / Minus Query: 499 aggatgtagtttgggaaggtccgactgctggagttgaagcagctgtcgatttcttcaagg 558 ||||||| || ||| |||||| ||| ||||||||||| ||||||| |||||||||| | Sbjct: 36240 aggatgtggtctggcaaggtcagacagctggagttgaggcagctgagaatttcttcaaag 36181 Query: 559 cagataaagcatttccacttagtgaaatgaaaaag 593 | || |||||||||||||||||||| ||| ||||| Sbjct: 36180 cggacaaagcatttccacttagtgagatgcaaaag 36146 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 1468 tgacggcgtctgtgcccaaggagatcccccacctcaccaccctgatgaacatggg 1522 |||||||||| ||||| ||||||||| | ||| | |||||||| ||||||||||| Sbjct: 33734 tgacggcgtcggtgccgaaggagatctctcacataaccacccttatgaacatggg 33680 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 199 ttgatgttggccagccaacacccagatctcatcc 232 ||||||||||||| ||||||||| |||||||||| Sbjct: 37455 ttgatgttggccaaccaacaccccgatctcatcc 37422 Score = 46.1 bits (23), Expect = 0.46 Identities = 62/75 (82%) Strand = Plus / Minus Query: 1262 aggtcattcgttgggaatggatattcatgactccacgagcctcagcagcgacaaaacctt 1321 |||||| ||||| ||||||||||||||||| ||| | || |||| |||||| |||| Sbjct: 34276 aggtcactcgttaggaatggatattcatgattccgtcaagcttagcaaggacaaaccctt 34217 Query: 1322 ggagccaggcgttgt 1336 ||||||||| ||||| Sbjct: 34216 ggagccaggagttgt 34202
>gb|AY111794.1| Zea mays CL13018_1 mRNA sequence Length = 370 Score = 105 bits (53), Expect = 6e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 1423 ggatcgaggacgaggtcctcatcaccgagtccggccacgaggtgttgacggcgtctgtgc 1482 ||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||| Sbjct: 355 ggatcgaggacaaggtcctcatcaccgacgacggccacgaggtcgagacggcgtcggtgc 296 Query: 1483 ccaaggagatcccccacctcaccaccctgatgaacatgggc 1523 |||||||| || | ||||| ||||||||||||||||||||| Sbjct: 295 ccaaggaggtctcgcacctgaccaccctgatgaacatgggc 255
>ref|NM_100800.2| Arabidopsis thaliana metalloexopeptidase/ metallopeptidase/ methionyl aminopeptidase/ peptidase (AT1G09300) mRNA, complete cds Length = 1619 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 885 agaggtgcccaaagaatggcgttccatcctgtagttggtggtggagcaaatggcagtgtt 944 |||||||| || ||||||||||| |||||||||| |||||||| |||||| ||||||| Sbjct: 827 agaggtgctcagcgaatggcgttcaatcctgtagtcggtggtggttcaaatgccagtgtt 886 Query: 945 gtacattactcaagaaatgat 965 | || || ||| |||||||| Sbjct: 887 attcactattcacgaaatgat 907 Score = 42.1 bits (21), Expect = 7.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 428 gcaacctggtggtgtagcagttttaagtaaggaaactggtttatgtatgttcatgcc 484 |||||| |||||||| || ||||||||| | ||| |||||||| ||||||||||| Sbjct: 370 gcaaccaggtggtgtggctgttttaagtgatgaacgcggtttatgcatgttcatgcc 426
>dbj|AK117456.1| Arabidopsis thaliana At1g09300 mRNA for unknown protein, complete cds, clone: RAFL17-06-D04 Length = 1620 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 885 agaggtgcccaaagaatggcgttccatcctgtagttggtggtggagcaaatggcagtgtt 944 |||||||| || ||||||||||| |||||||||| |||||||| |||||| ||||||| Sbjct: 827 agaggtgctcagcgaatggcgttcaatcctgtagtcggtggtggttcaaatgccagtgtt 886 Query: 945 gtacattactcaagaaatgat 965 | || || ||| |||||||| Sbjct: 887 attcactattcacgaaatgat 907 Score = 42.1 bits (21), Expect = 7.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 428 gcaacctggtggtgtagcagttttaagtaaggaaactggtttatgtatgttcatgcc 484 |||||| |||||||| || ||||||||| | ||| |||||||| ||||||||||| Sbjct: 370 gcaaccaggtggtgtggctgttttaagtgatgaacgcggtttatgcatgttcatgcc 426
>emb|BX814500.1|CNS0AEBH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1397 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 885 agaggtgcccaaagaatggcgttccatcctgtagttggtggtggagcaaatggcagtgtt 944 |||||||| || ||||||||||| |||||||||| |||||||| |||||| ||||||| Sbjct: 681 agaggtgctcagcgaatggcgttcaatcctgtagtcggtggtggttcaaatgccagtgtt 740 Query: 945 gtacattactcaagaaatgat 965 | || || ||| |||||||| Sbjct: 741 attcactattcacgaaatgat 761 Score = 42.1 bits (21), Expect = 7.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 428 gcaacctggtggtgtagcagttttaagtaaggaaactggtttatgtatgttcatgcc 484 |||||| |||||||| || ||||||||| | ||| |||||||| ||||||||||| Sbjct: 224 gcaaccaggtggtgtggctgttttaagtgatgaacgcggtttatgcatgttcatgcc 280
>emb|BX815343.1|CNS0AE1M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1553 Score = 56.0 bits (28), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 898 gaatggcgttccatcctgtagttggtggtggagcaaatggcagtgtt 944 |||||||||| ||||||||||| |||||||| |||||| ||||||| Sbjct: 838 gaatggcgttncatcctgtagtcggtggtgggtcaaatgccagtgtt 884 Score = 42.1 bits (21), Expect = 7.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 428 gcaacctggtggtgtagcagttttaagtaaggaaactggtttatgtatgttcatgcc 484 |||||| |||||||| || ||||||||| | ||| |||||||| ||||||||||| Sbjct: 368 gcaaccaggtggtgtggctgttttaagtgatgaacgcggtttatgcatgttcatgcc 424
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1432 acgaggtcctcatcaccgagtcc 1454 ||||||||||||||||||||||| Sbjct: 2970800 acgaggtcctcatcaccgagtcc 2970822
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1438 tcctcatcaccgagtccggccacgag 1463 |||||||||||||||||||| ||||| Sbjct: 4481923 tcctcatcaccgagtccggctacgag 4481898
>ref|XM_788809.2| PREDICTED: Strongylocentrotus purpuratus similar to LOC63929 (LOC589159), mRNA Length = 1559 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 996 atggatgttggatgtgagtaccatgg 1021 ||||||| |||||||||||||||||| Sbjct: 1020 atggatgctggatgtgagtaccatgg 1045
>ref|XM_001193479.1| PREDICTED: Strongylocentrotus purpuratus similar to LOC63929 (LOC756094), mRNA Length = 1325 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 996 atggatgttggatgtgagtaccatgg 1021 ||||||| |||||||||||||||||| Sbjct: 801 atggatgctggatgtgagtaccatgg 826
>ref|XM_001204314.1| PREDICTED: Strongylocentrotus purpuratus similar to LOC63929 (LOC589159), mRNA Length = 1559 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 996 atggatgttggatgtgagtaccatgg 1021 ||||||| |||||||||||||||||| Sbjct: 1020 atggatgctggatgtgagtaccatgg 1045
>ref|XM_001204313.1| PREDICTED: Strongylocentrotus purpuratus similar to LOC63929 (LOC767444), mRNA Length = 1325 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 996 atggatgttggatgtgagtaccatgg 1021 ||||||| |||||||||||||||||| Sbjct: 801 atggatgctggatgtgagtaccatgg 826
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1444 tcaccgagtccggccacgaggt 1465 |||||||||||||||||||||| Sbjct: 3785956 tcaccgagtccggccacgaggt 3785935
>gb|AC023926.6| Homo sapiens chromosome 8, clone RP11-9P20, complete sequence Length = 151353 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 826 caaggacccacagggaggaaag 847 |||||||||||||||||||||| Sbjct: 103561 caaggacccacagggaggaaag 103540
>emb|AL359979.10| Human DNA sequence from clone RP11-239E10 on chromosome 1 Contains the 5' end of the TLR5 gene for toll-like receptor 5, two novel genes, the gene for a novel protein (FLJ10052) and a CpG island, complete sequence Length = 181466 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 cagatcagcagatgatgactga 370 |||||||||||||||||||||| Sbjct: 15424 cagatcagcagatgatgactga 15403
>dbj|AP005365.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB52G8, complete sequence Length = 103221 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 826 caaggacccacagggaggaaag 847 |||||||||||||||||||||| Sbjct: 102155 caaggacccacagggaggaaag 102176
>gb|AC007198.6|AC007198 Homo sapiens, clone 18_A_13, complete sequence Length = 166977 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 cagatcagcagatgatgactga 370 |||||||||||||||||||||| Sbjct: 137048 cagatcagcagatgatgactga 137069
>gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175606 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 779 gtcagcatctattgtttctcag 800 |||||||||||||||||||||| Sbjct: 171934 gtcagcatctattgtttctcag 171913
>emb|Z66564.2| Caenorhabditis elegans Cosmid F52D10, complete sequence Length = 40971 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1760 tttgatcttcatttttgttgt 1780 ||||||||||||||||||||| Sbjct: 23880 tttgatcttcatttttgttgt 23900
>dbj|AK243333.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100058N12, full insert sequence Length = 3816 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 927 ggagcaaatggcagtgttgta 947 ||||||||||||||||||||| Sbjct: 1042 ggagcaaatggcagtgttgta 1062
>ref|NM_001066347.1| Oryza sativa (japonica cultivar-group) Os07g0521800 (Os07g0521800) mRNA, complete cds Length = 3303 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 927 ggagcaaatggcagtgttgta 947 ||||||||||||||||||||| Sbjct: 1195 ggagcaaatggcagtgttgta 1215
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 caagtgaggagtacatatgta 291 ||||||||||||||||||||| Sbjct: 19000117 caagtgaggagtacatatgta 19000137
>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 150760 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 ttcatgccagataaacacaag 497 ||||||||||||||||||||| Sbjct: 74823 ttcatgccagataaacacaag 74803
>gb|AE014314.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 11 of 11 of the complete sequence Length = 249198 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 cactcaacaataaagtaaaag 711 ||||||||||||||||||||| Sbjct: 237237 cactcaacaataaagtaaaag 237257
>gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's Hospital Oakland Research Institute) complete sequence Length = 216194 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 692 actcaacaataaagtaaaaga 712 ||||||||||||||||||||| Sbjct: 205456 actcaacaataaagtaaaaga 205436
>gb|AC079908.27| Homo sapiens 12 BAC RP11-447N18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 59444 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 789 attgtttctcagtctcttttg 809 ||||||||||||||||||||| Sbjct: 14620 attgtttctcagtctcttttg 14600
>gb|AC007195.6| Arabidopsis thaliana chromosome 2 clone F1P15 map mi398, complete sequence Length = 56284 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 atatgtagaagaaaaaagctt 305 ||||||||||||||||||||| Sbjct: 42660 atatgtagaagaaaaaagctt 42640
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 927 ggagcaaatggcagtgttgta 947 ||||||||||||||||||||| Sbjct: 20121421 ggagcaaatggcagtgttgta 20121441
>gb|AC092055.2| Homo sapiens chromosome 3 clone RP11-437K13, complete sequence Length = 153447 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 791 tgtttctcagtctcttttgcagaca 815 |||||| |||||||||||||||||| Sbjct: 104545 tgtttcccagtctcttttgcagaca 104569
>emb|AL138701.16| Human DNA sequence from clone RP11-406G20 on chromosome 13, complete sequence Length = 173496 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 cactcaacaataaagtaaaag 711 ||||||||||||||||||||| Sbjct: 167737 cactcaacaataaagtaaaag 167757
>gb|AC099036.1| Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone BACR34K16, complete sequence Length = 180361 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 caagtgaggagtacatatgta 291 ||||||||||||||||||||| Sbjct: 163747 caagtgaggagtacatatgta 163727
>emb|AL935252.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 1/11 Length = 343050 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1014 taccatggctaccttagtgac 1034 ||||||||||||||||||||| Sbjct: 232786 taccatggctaccttagtgac 232766
>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone BACR08P09, complete sequence Length = 181463 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 caagtgaggagtacatatgta 291 ||||||||||||||||||||| Sbjct: 150881 caagtgaggagtacatatgta 150901
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 927 ggagcaaatggcagtgttgta 947 ||||||||||||||||||||| Sbjct: 23809 ggagcaaatggcagtgttgta 23829
>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence Length = 211243 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1757 gtttttgatcttcatttttgttgtt 1781 ||||||||| ||||||||||||||| Sbjct: 45572 gtttttgattttcatttttgttgtt 45596
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1434 gaggtcctcatcaccgagtcc 1454 ||||||||||||||||||||| Sbjct: 46179 gaggtcctcatcaccgagtcc 46159
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1657_A07 Length = 125217 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 927 ggagcaaatggcagtgttgta 947 ||||||||||||||||||||| Sbjct: 86024 ggagcaaatggcagtgttgta 86044
>dbj|AP006192.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-467K9, complete sequence Length = 140549 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 791 tgtttctcagtctcttttgcagaca 815 |||||| |||||||||||||||||| Sbjct: 64323 tgtttcccagtctcttttgcagaca 64299
>gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J12 sequence, complete sequence Length = 16549 Score = 42.1 bits (21), Expect = 7.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 428 gcaacctggtggtgtagcagttttaagtaaggaaactggtttatgtatgttcatgcc 484 |||||| |||||||| || ||||||||| | ||| |||||||| ||||||||||| Sbjct: 2658 gcaaccaggtggtgtggctgttttaagtgatgaacgcggtttatgcatgttcatgcc 2714
>emb|AL110479.1|CEY105C5B Caenorhabditis elegans YAC Y105C5B, complete sequence Length = 321304 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 793 tttctcagtctcttttgcaga 813 ||||||||||||||||||||| Sbjct: 208013 tttctcagtctcttttgcaga 207993
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1434 gaggtcctcatcaccgagtcc 1454 ||||||||||||||||||||| Sbjct: 1866035 gaggtcctcatcaccgagtcc 1866055
>emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, complete sequence Length = 156592 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1642 atccatacattttctttcccc 1662 ||||||||||||||||||||| Sbjct: 48827 atccatacattttctttcccc 48847
>emb|CT010510.7| Mouse DNA sequence from clone RP23-306N20 on chromosome 14, complete sequence Length = 217241 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1757 gtttttgatcttcatttttgttgtt 1781 ||||||||| ||||||||||||||| Sbjct: 22990 gtttttgattttcatttttgttgtt 22966
>dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308, anti-oncogene region, section 1/5 Length = 200000 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 791 tgtttctcagtctcttttgcagaca 815 |||||| |||||||||||||||||| Sbjct: 124103 tgtttcccagtctcttttgcagaca 124079 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 345,873,671 Number of extensions: 18938125 Number of successful extensions: 353224 Number of sequences better than 10.0: 47 Number of HSP's gapped: 353224 Number of HSP's successfully gapped: 81 Length of query: 1884 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1861 Effective length of database: 18,503,978,556 Effective search space: 34435904092716 Effective search space used: 34435904092716 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
