ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf63f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0386700:Os04g0386700 377 e-104
2AK107224:Os10g0548100 129 3e-30
3AK102356:Os08g0159900 40 0.002
4AK102216:Os01g0142800 39 0.009
5AK102789:Os08g0414200 33 0.38
6AK109979: 32 1.1
7AK121616:Os01g0327000 31 1.5
8AK071092:Os09g0103700 31 1.5
9U82833:Os01g0323600 31 1.9
10AK103104:Os05g0487600 31 1.9
11AK100817:Os05g0487600 31 1.9
12AK071516:Os01g0323600 31 1.9
13AK119859: 30 3.3
14AK102651:Os03g0197300 30 3.3
15Os03g0775000:Os03g0775000 30 4.2
16Os04g0602000:Os04g0602000 29 5.6
17AK067818:Os02g0301800 29 5.6
18Os10g0379100:Os10g0379100 29 7.2
19AK063411:Os09g0348800 29 7.2
20Os01g0216700:Os01g0216700 28 9.5

>Os04g0386700:Os04g0386700 |
          Length = 274
 Score =  377 bits (967), Expect = e-104
 Identities = 207/285 (72%), Positives = 224/285 (78%), Gaps = 5/285 (1%)
 Frame = +1

Query: 145 MSGISLAVAPRSD--PDNGAER--QPSSAMLGGVMGSLRVIELQLVAFIMVFSMSGLVPL 312
           MSG+SLAV PR+    D  AER  Q  S MLGGVMGSLRVIELQLVAFIMVFS SGLVPL
Sbjct: 1   MSGMSLAVGPRTSGTDDTAAERGQQQPSTMLGGVMGSLRVIELQLVAFIMVFSASGLVPL 60

Query: 313 IDLAFPVVTTLYLIVLSRLAFPSLHSKLDDQXXXXXXXXXQEIFRGSKLFQVYVVMGTTV 492
           IDLAFPV TTLYL++LSRL+FP LHS L            QEIFRGS  FQ YVV+GTTV
Sbjct: 61  IDLAFPVATTLYLLLLSRLSFPPLHSTLPSSSSSS-----QEIFRGSTWFQAYVVLGTTV 115

Query: 493 GLFLPLAHVLGGFARGDDAAVRSATPHLFLLSCQILTENIVGSLG-VFSPPLRALVPLLY 669
           GLFLPLAHVLGGFARGDD AVRSATPHLFLLSCQILTEN+VG+LG  FSPP+RALVPLLY
Sbjct: 116 GLFLPLAHVLGGFARGDDGAVRSATPHLFLLSCQILTENVVGALGAAFSPPVRALVPLLY 175

Query: 670 TVRRVFVIVDWVYDVWTNKLITRSAPVQHKAWVWFGRYLAVANLVYFSINLFVFLIPKFL 849
           TVRRVFV VDWVYD W N+    +AP +  AW+WFGRYLAVANLVYFS NL VFLIPKFL
Sbjct: 176 TVRRVFVAVDWVYDAWGNR-AAAAAPQEAVAWMWFGRYLAVANLVYFSTNLLVFLIPKFL 234

Query: 850 PRAFEKYFHTRDEVYAKTAEDKRARDLSSLDDDGAAKSEVSKKAD 984
           PR+FEKYF  RDEVYA+TAED+ A   +      AAK   SKKAD
Sbjct: 235 PRSFEKYFRMRDEVYAETAEDRHAAAATV-----AAKPVESKKAD 274



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>AK107224:Os10g0548100 |
          Length = 277

 Score =  129 bits (325), Expect = 3e-30
 Identities = 85/233 (36%), Positives = 120/233 (51%), Gaps = 5/233 (2%)
 Frame = +1

Query: 283 VFSMSGLVPLIDLAFPVVTTLYLIVLSRLAFPSLHSKLDDQXXXXXXXXXQEIFRGSKLF 462
           V + S  VPL D+AF ++   YL+VLS LAFP    K +             + RG  L 
Sbjct: 56  VLAFSTTVPLSDIAFALLVIPYLVVLSVLAFPQRPGKPNPGAPVF-------LGRGRFLL 108

Query: 463 QVYVVMGTTVGLFLPLAHVLGGFARGDDAAVRSATPHLFLLSCQILTENIVGSL-GVFSP 639
           + +  +G  VG  LP  ++L G   GD A V +A+PH FLL+ QI TE +  +  G FS 
Sbjct: 109 RAHDALGFLVGAALPALYILDGLRSGDTAGVAAASPHAFLLAAQIFTEGLAAAWPGRFSL 168

Query: 640 PLRALVPLLYTVRRVFVIVDWVYDVWTNKLI----TRSAPVQHKAWVWFGRYLAVANLVY 807
           P+RA V ++Y  RR+F   +W+      +         AP   +  V  GR LAVANL Y
Sbjct: 169 PVRAAVVVMYGARRMFAASEWLRQEMEKRDQFGGGVGGAPAVARRRVVAGRVLAVANLAY 228

Query: 808 FSINLFVFLIPKFLPRAFEKYFHTRDEVYAKTAEDKRARDLSSLDDDGAAKSE 966
           + INLF FL+P +LP+AF +Y+   D     + ED       ++D D A K +
Sbjct: 229 WGINLFAFLLPFYLPKAFNRYYCGSD-----SKEDDATAAAGAIDADDAKKKD 276



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>AK102356:Os08g0159900 |
          Length = 1049

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = -3

Query: 666 EKRHQRPQRRREDA------E*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQR 505
           E+RH+  +R RE+       E   +  RE   R +E+ R   + R   AA E  +DV + 
Sbjct: 58  ERRHREKERDREERKAREREEREKEKERERARRREERDREERSRRREAAAEEEEEDVDRD 117

Query: 504 QEQPHRGAHHHIH 466
           +++  R +HHH H
Sbjct: 118 RKRRRRSSHHHHH 130



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>AK102216:Os01g0142800 |
          Length = 510

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 27/75 (36%), Positives = 35/75 (46%)
 Frame = -3

Query: 663 KRHQRPQRRREDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQEQPHRG 484
           +RH   Q      + AD+  R    R  E+V RRG  R V AAR+  Q VR R  QP  G
Sbjct: 145 RRHAAVQAPAARGQPADED-RAGARRVGEEVGRRGPRRRVAAARDARQGVRHR-GQPQAG 202

Query: 483 AHHHIHLEQLASAED 439
           AH  + + +     D
Sbjct: 203 AHRAVRVPRQGGGGD 217



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>AK102789:Os08g0414200 |
          Length = 531

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
 Frame = -1

Query: 1040 RDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSSSSEDRSLARLSSAVFAYTSSRVWKYFS 861
            RD++    T   E   R + A   T++ A  +  +  R +AR      +YTSSR     S
Sbjct: 166  RDNSKIGATHVKERRKRLKHAQNSTNEDALDAEDNISRLMARQGRYESSYTSSR---SAS 222

Query: 860  NARGRNLGI---------RKTNRLMEK*TRFATARYL 777
            N +G  L +         RK N LM+K TR   A YL
Sbjct: 223  NQKGDLLKLLHNDDASMMRKRNSLMKKETRTKLAGYL 259



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>AK109979: |
          Length = 934

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/78 (19%), Positives = 34/78 (43%)
 Frame = -3

Query: 675 HGVEKRHQRPQRRREDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQEQ 496
           H  + +HQ+    ++  +      ++   ++Q+Q+     H +     +P Q  +Q Q Q
Sbjct: 214 HAAQHQHQQVMLHQQQQQQQQQQQQQRQQQQQQQLHHPHQHPAQPQTPQPQQPQQQHQPQ 273

Query: 495 PHRGAHHHIHLEQLASAE 442
            H  +H  + L+    A+
Sbjct: 274 QHMPSHSQVTLQSHPQAQ 291



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>AK121616:Os01g0327000 |
          Length = 357

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = -3

Query: 687 EYAAHGVEKRHQRPQRRREDAE*ADDVLREDLAREQEQ-VRRRGAHRSVVAA---REPAQ 520
           E  AHGV +RH+R +R R+       +L   L   + Q +RR G HR    A   R PA+
Sbjct: 68  ELRAHGVLRRHRRVRRPRQRQPHRRRLLPGPLRPPRRQRLRRPGRHRQPPPAHLHRRPAR 127

Query: 519 DVRQRQEQPHR 487
             + RQ+  HR
Sbjct: 128 R-QLRQQVAHR 137



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>AK071092:Os09g0103700 |
          Length = 377

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -3

Query: 666 EKRHQRPQRRREDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQEQPHR 487
           + R +R +R  ED+E   D  R   +R+  + RRR   RS   + E       R+ + HR
Sbjct: 254 KSRRKRHERSDEDSESDSDKKRHRKSRKDRK-RRRSHRRSDDTSDEDESGGEDRRRRRHR 312

Query: 486 GAHHH 472
              HH
Sbjct: 313 KRQHH 317



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>U82833:Os01g0323600 |
          Length = 212

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
 Frame = -3

Query: 675 HGVEKRHQRPQRR--REDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQ 502
           HG   R  RP     R D     D  R   AR Q    R+   R      +P   +R R+
Sbjct: 8   HGPRPRPHRPHLHPARRDRHQRRDRRRPQGARHQAGHPRQVPRREDHLPPQPLGPLRHRR 67

Query: 501 ----EQPHRGAHHHIHLEQLASA 445
                +PHR   HH HL ++  A
Sbjct: 68  APRRRRPHRPQDHHRHLRRMGRA 90



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>AK103104:Os05g0487600 |
          Length = 126

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 593 WHESRNRCGVAERTAASSPRANPPRTCASGRNSPTVVPIT 474
           W +SR RC +   + AS P A PP   +  R  P   P T
Sbjct: 14  WRQSRRRCSLPLSSPASWPPAPPPVLTSPQRRPPPASPPT 53



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>AK100817:Os05g0487600 |
          Length = 126

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 593 WHESRNRCGVAERTAASSPRANPPRTCASGRNSPTVVPIT 474
           W +SR RC +   + AS P A PP   +  R  P   P T
Sbjct: 14  WRQSRRRCSLPLSSPASWPPAPPPVLTSPQRRPPPASPPT 53



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>AK071516:Os01g0323600 |
          Length = 212

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
 Frame = -3

Query: 675 HGVEKRHQRPQRR--REDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQ 502
           HG   R  RP     R D     D  R   AR Q    R+   R      +P   +R R+
Sbjct: 8   HGPRPRPHRPHLHPARRDRHQRRDRRRPQGARHQAGHPRQVPRREDHLPPQPLGPLRHRR 67

Query: 501 ----EQPHRGAHHHIHLEQLASA 445
                +PHR   HH HL ++  A
Sbjct: 68  APRRRRPHRPQDHHRHLRRMGRA 90



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>AK119859: |
          Length = 727

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/57 (29%), Positives = 32/57 (56%)
 Frame = -3

Query: 666 EKRHQRPQRRREDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQEQ 496
           E+R ++ +RRR + E       ++ ARE+E+   +   R     R+ A+D R+R+E+
Sbjct: 188 EERAKKEERRRRERE-------QEEAREKERQAEKERRRKEREERDKAEDERRRKER 237



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>AK102651:Os03g0197300 |
          Length = 601

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -3

Query: 666 EKRHQRPQRRREDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQEQ 496
           E+R Q  +R+R + E  +   RE+  R Q +   +         RE  ++ R+R+E+
Sbjct: 497 ERRRQEEERKRREEEEKERREREEEERRQREKEEKKRREEEEQRREEEEEERRREEE 553



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>Os03g0775000:Os03g0775000 |
          Length = 702

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
 Frame = -1

Query: 329 GKARSMSGTRPDIEKTMMKATSWSSMT---------RSEPMTPPSIADDGCRSAPLSGSD 177
           G+AR  + TR  +      AT W+  T         R    T     DDG  +A   G D
Sbjct: 620 GRARRAASTRVALASLRAHATPWTMTTMTMDADEDGRCRRRTGVGAGDDGLTTAAPGGED 679

Query: 176 RGAT 165
            GAT
Sbjct: 680 DGAT 683



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>Os04g0602000:Os04g0602000 |
          Length = 677

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = -3

Query: 669 VEKRHQRPQRRREDAE*ADDVLREDLAREQEQVRRRGAHRSVVAAREPAQDVRQRQEQPH 490
           +E+  +R      D +   D  R          R   + RS+  +REP+  V++R   PH
Sbjct: 121 MERSPRRAGEAENDRKEVADAARPSRGELSSMERGSSSRRSL--SREPSSAVQERGHGPH 178

Query: 489 RGA 481
           RGA
Sbjct: 179 RGA 181



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>AK067818:Os02g0301800 |
          Length = 1072

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 23/78 (29%), Positives = 39/78 (50%)
 Frame = +1

Query: 121  RRLTEAAAMSGISLAVAPRSDPDNGAERQPSSAMLGGVMGSLRVIELQLVAFIMVFSMSG 300
            +RL      SGI +     S  D   ER  +S + GG+ GS+++I+L    F+M   + G
Sbjct: 950  KRLESITICSGIIIDALAFSYLDKDGERHTTS-LWGGLGGSVQLIDLDEREFLM--EVIG 1006

Query: 301  LVPLIDLAFPVVTTLYLI 354
             V   ++    +T+L L+
Sbjct: 1007 TVGPFNVLSEAITSLTLV 1024



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>Os10g0379100:Os10g0379100 |
          Length = 436

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -1

Query: 254 MTRSEPMTPPSIADDGCRSAPLSGSDRGATASDIPDM----AAASVSL 123
           +TRSE + P   +  G    PL+  DR AT   IP M    AAA+ +L
Sbjct: 8   ITRSEVLRPSPASAGGGEMVPLTVFDRAATDGYIPTMFAWDAAAAAAL 55



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>AK063411:Os09g0348800 |
          Length = 527

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -3

Query: 666 EKRHQRPQRRREDAE*ADDVLREDLAREQEQVRR 565
           E+R +  +R R++ E   +  RE+ ARE+EQ R+
Sbjct: 412 EEREREKERERQEKEQEKECEREERAREKEQERK 445



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>Os01g0216700:Os01g0216700 |
          Length = 353

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = -2

Query: 970 RPRILPHHHHRARTDL*PAC-----PPPSSHTP 887
           RPR+LP   HR  + + PA      PPPSS +P
Sbjct: 259 RPRLLPRRCHRLLSRVAPAASSPTMPPPSSLSP 291


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,190,780
Number of extensions: 532302
Number of successful extensions: 2682
Number of sequences better than 10.0: 20
Number of HSP's gapped: 2645
Number of HSP's successfully gapped: 20
Length of query: 386
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 284
Effective length of database: 11,315,673
Effective search space: 3213651132
Effective search space used: 3213651132
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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