>P17779:RDRP_PVXX3 RNA replication protein - Potato virus X (strain X3) (PVX)|
          Length = 1456
 Score = 38.9 bits (89), Expect = 0.12
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
 Frame = +2

Query: 1664 SARVGLVQMFSSPEWVPSGWACLDLFERIQRIVKT--DDTFWHAAAQVVKVTNPLVRVLS 1837
            S R G+ ++  S E++      +   E+ +  + T  +DTF +A  Q   +T P V+++ 
Sbjct: 880  SERTGVTEISMSAEFLEGIPTLVPSDEKRKLYMGTGRNDTFTYAGCQ--GLTKPKVQIVL 937

Query: 1838 KLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
               + +C   ++Y A+  A + IH VN    S  +W  +D
Sbjct: 938  DHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLD 977

>P09395:RDRP_PVX RNA replication protein - Potato virus X (PVX)|
          Length = 1456

 Score = 38.9 bits (89), Expect = 0.12
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
 Frame = +2

Query: 1664 SARVGLVQMFSSPEWVPSGWACLDLFERIQRIVKT--DDTFWHAAAQVVKVTNPLVRVLS 1837
            S R G+ ++  S E++      +   E+ +  + T  +DTF +A  Q   +T P V+++ 
Sbjct: 880  SERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMGTGRNDTFTYAGCQ--GLTKPKVQIVL 937

Query: 1838 KLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
               + +C   ++Y A+  A + IH VN    S  +W  +D
Sbjct: 938  DHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLD 977

>P22591:RDRP_PVXCP RNA replication protein - Potato virus X (strain CP) (PVX)|
          Length = 1456

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
 Frame = +2

Query: 1664 SARVGLVQMFSSPEWVPSGWACLDLFERIQRIVKT--DDTFWHAAAQVVKVTNPLVRVLS 1837
            S R G  ++  S E++      +   E+ +  + T  +DTF +A  Q   +T P V+++ 
Sbjct: 880  SERTGTTEISMSSEFLEGVPTLVPSDEKRRLYMGTGRNDTFTYAGCQ--GLTKPKVQIVL 937

Query: 1838 KLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
               + +C   ++Y A+  A + IH +N    S  +W  +D
Sbjct: 938  DHNTQVCSANVMYSALSRATDRIHFINTSANSSAFWEKLD 977

>Q07630:RDRP_PVXHB RNA replication protein - Potato virus X (strain HB) (PVX)|
          Length = 1456

 Score = 38.1 bits (87), Expect = 0.20
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
 Frame = +2

Query: 1664 SARVGLVQMFSSPEWVPSGWACLDLFERIQRIVKT--DDTFWHAAAQVVKVTNPLVRVLS 1837
            S R G  ++  S E++      +   E+ +  + T  +DTF +A  Q   +T P V+++ 
Sbjct: 880  SERTGTTEISMSSEFLEGVPTLVPSDEKRKLYMGTGRNDTFTYAGCQ--GLTKPKVQIVL 937

Query: 1838 KLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
               + +C   ++Y A+  A + IH +N    S  +W  +D
Sbjct: 938  DHNTQVCSANVMYTALSRATDRIHFINTSANSSAFWEKLD 977

>P28897:RDRP_SMYEA RNA replication protein - Strawberry mild yellow edge-associated|
            virus (SMYEaV)
          Length = 1323

 Score = 34.7 bits (78), Expect = 2.2
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 1808 VTNPLVRVLSKLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
            +T P V++L   ++ +C   ++Y A+  A  EIH VN G   + +W  +D
Sbjct: 798  LTAPRVQILLDNDTPLCSQRVMYTALSRAVNEIHFVNTGPSGDDFWTKLD 847

>Q9X6V6:RLPA_PSEAE RlpA-like lipoprotein precursor - Pseudomonas aeruginosa|
          Length = 342

 Score = 33.9 bits (76), Expect = 3.8
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 2144 KKLGYFDTDPAMQQIMELPQVQWWSTHGARVPDLQTLARRVLSQTCFGATR 2296
            KKLGY +T  A  ++  +  VQWW+  G   P +    ++ ++Q    A +
Sbjct: 175  KKLGYAETGTARVKVEGIDPVQWWAQRGRPAPMVLAQPKQAVAQAAPAAAQ 225

>O43422:P52K_HUMAN 52 kDa repressor of the inhibitor of the protein kinase - Homo|
            sapiens (Human)
          Length = 761

 Score = 33.9 bits (76), Expect = 3.8
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
 Frame = +2

Query: 1142 RAKELKQEWQTSGCTVIVDSWKSKSGKSFVSVLVHCSKGMHFLRS--IDVSEITEDLDEL 1315
            R + L++   +   ++I D     +G+  + VLV      H LR   I       D + L
Sbjct: 247  REETLREVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFIGFLPYEADAEIL 306

Query: 1316 ESMLSRVVDDVGAHNI------VQIITNDVSPHMQIARQYVLNKYDEFFFVLCADHCINL 1477
                  ++ +    N+        I+++  S  M++    +L KY +  + LC+   +N+
Sbjct: 307  AVKFHTMITEKWGLNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQAIYTLCSSCALNM 366

Query: 1478 LLEKIAALKHVSKVLIKARDITRFLY 1555
             L K   +  VS  L    ++  F +
Sbjct: 367  WLAKSVPVMGVSVALGTIEEVCSFFH 392

>Q7L590:MCM10_HUMAN Protein MCM10 homolog - Homo sapiens (Human)|
          Length = 875

 Score = 33.5 bits (75), Expect = 4.9
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
 Frame = +2

Query: 623 CTYNRLEQHVA-----GIRGNVRPCNLVPDSVRTSLRASLVDRKKGRMLRQTKRLKHE-- 781
           C    L+QH+A     GI G+ +P      ++++   ++L+ ++K RML   +R   E  
Sbjct: 528 CGARNLKQHLAKATASGIMGSPKP------AIKSISASALLKQQKQRMLEMRRRKSEEIQ 581

Query: 782 ----HDEVSHKSPALPSAQVQQPKLQPTVSS 862
                     +SPA+PS+  Q P   P   S
Sbjct: 582 KRFLQSSSEVESPAVPSSSRQPPAQPPRTGS 612

>Q9ULJ3:ZN295_HUMAN Zinc finger protein 295 - Homo sapiens (Human)|
          Length = 1066

 Score = 32.7 bits (73), Expect = 8.4
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
 Frame = +2

Query: 530  PQTSNRGKERHGKTIDEEGSRVSCNYCGKVVCTYNRLEQHVAGIRGNVRP--CNLVPDSV 703
            P+ S   KE       +E S   C  CGK+   + +LE+H   +  +V+P  C++   + 
Sbjct: 891  PEASTAPKEAGPS---KEASLWPCEKCGKMFTVHKQLERH-QELLCSVKPFICHVCNKAF 946

Query: 704  RTSLRASLVDRKKGRMLRQTKRLKHEHDEV------SHKSPALPSAQVQQPKLQP 850
            RT+ R  L    +  M + ++   H+  EV      S   P LP      PK+QP
Sbjct: 947  RTNFR--LWSHFQSHMSQASEESAHKESEVCPVPTNSPSPPPLPPPP-PLPKIQP 998

>P20951:RDRP_PMV RNA replication protein - Papaya mosaic potexvirus (PMV)|
          Length = 1547

 Score = 32.7 bits (73), Expect = 8.4
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 1808 VTNPLVRVLSKLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
            +T P +++L   E+ +C   +LY A+  A   IH VN    ++ +W  ++
Sbjct: 1013 ITAPKIQILLTEETSLCSREVLYTALSRAVHSIHFVNASPNNQAFWKKLE 1062

>Q07518:RDRP_P1AMV RNA replication protein - Plantago asiatica mosaic potexvirus (P1AMV)|
          Length = 1385

 Score = 32.7 bits (73), Expect = 8.4
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 1808 VTNPLVRVLSKLESDICPMGILYEAMDGAKEEIH-VNIGDESELYWGMID 1954
            +T P V++L   ++ +C   +LY A+  A + IH VN   +S  +W  ++
Sbjct: 856  ITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQSSAFWEKLE 905


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 498,269,692
Number of extensions: 11233074
Number of successful extensions: 30185
Number of sequences better than 10.0: 11
Number of HSP's gapped: 30151
Number of HSP's successfully gapped: 11
Length of query: 924
Length of database: 100,686,439
Length adjustment: 123
Effective length of query: 801
Effective length of database: 66,948,154
Effective search space: 53625471354
Effective search space used: 53625471354
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)