| Clone Name | FLbaf63e08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 353 attcgcccgtcgccgacctcgtgc 376 |||||||||||||||||||||||| Sbjct: 291343 attcgcccgtcgccgacctcgtgc 291320
>dbj|AB270530.1| Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence Length = 254797 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 aaatcttccggattcgcccgtcgcc 366 |||||||| |||||||||||||||| Sbjct: 34340 aaatcttcaggattcgcccgtcgcc 34316
>gb|DQ351904.1| Klebsiella sp. LSSE-H2 carbazole operon, partial sequence Length = 3782 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 aaatcttccggattcgcccgtcgcc 366 |||||||| |||||||||||||||| Sbjct: 3705 aaatcttcaggattcgcccgtcgcc 3729
>dbj|AB095953.2| Sphingomonas sp. KA1 car operons, complete cds Length = 13651 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 aaatcttccggattcgcccgtcgcc 366 |||||||| |||||||||||||||| Sbjct: 8824 aaatcttcaggattcgcccgtcgcc 8848
>ref|XM_363911.1| Magnaporthe grisea 70-15 hypothetical protein (MG01837.4) partial mRNA Length = 2910 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cccatgccatccctcgcggtctgc 158 ||||||||||||||||||| |||| Sbjct: 1406 cccatgccatccctcgcgggctgc 1383
>gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome 7, complete sequence Length = 151861 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 taaaagttactttgaagccg 572 |||||||||||||||||||| Sbjct: 125865 taaaagttactttgaagccg 125884
>gb|AF178757.1| Anabaena PCC7120 phycobilisome rod structure gene cluster, partial sequence Length = 16341 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ggctatgttttatttctgggaaac 542 ||||||||||||||||| |||||| Sbjct: 8489 ggctatgttttatttcttggaaac 8466
>gb|AC152166.4| Mus musculus BAC clone RP23-425A3 from chromosome 7, complete sequence Length = 216652 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 taaaagttactttgaagccg 572 |||||||||||||||||||| Sbjct: 37955 taaaagttactttgaagccg 37974
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ggctatgttttatttctgggaaac 542 ||||||||||||||||| |||||| Sbjct: 3636164 ggctatgttttatttcttggaaac 3636141
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 taccagctccatcaccagga 269 |||||||||||||||||||| Sbjct: 875452 taccagctccatcaccagga 875471
>dbj|AK050739.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030013L11 product:unclassifiable, full insert sequence Length = 3320 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 tttaaataaaagttactttg 566 |||||||||||||||||||| Sbjct: 1764 tttaaataaaagttactttg 1745
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgcccccgagctcgtcgtagccgc 192 |||||||||||||||||| ||||| Sbjct: 10048680 cgcccccgagctcgtcgtcgccgc 10048703
>emb|AL512503.14| Human DNA sequence from clone RP11-323K8 on chromosome 1 Contains part of the NOTCH2 gene for Notch homolog 2 (Drosophila), complete sequence Length = 109612 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 gaaacacagtttaaataaaa 557 |||||||||||||||||||| Sbjct: 15809 gaaacacagtttaaataaaa 15828
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 taaataaaagttactttgaa 568 |||||||||||||||||||| Sbjct: 661828 taaataaaagttactttgaa 661847
>emb|AJ238385.1|CLA238385 Chinchilla lanigera vWF gene (partial), exon 28 Length = 1263 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtgtgaccatgcgcccgagg 47 |||||||||||||||||||| Sbjct: 660 gtgtgaccatgcgcccgagg 679
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gctcgcccccgagctcgtcg 185 |||||||||||||||||||| Sbjct: 5349253 gctcgcccccgagctcgtcg 5349272
>emb|X05239.1|ANPC Anabaena 7120 billiprotein phycocyanin operon Length = 3920 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ggctatgttttatttctgggaaac 542 ||||||||||||||||| |||||| Sbjct: 432 ggctatgttttatttcttggaaac 409
>emb|AJ849318.1| Trinomys yonenagae partial vWF gene for von Willebrand Factor, exon 28 Length = 1155 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tgtgaccatgcgcccgagga 48 |||||||||||||||||||| Sbjct: 592 tgtgaccatgcgcccgagga 611
>emb|AJ849316.1| Trinomys paratus partial vWF gene for von Willebrand Factor, exon 28 Length = 1171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tgtgaccatgcgcccgagga 48 |||||||||||||||||||| Sbjct: 610 tgtgaccatgcgcccgagga 629
>emb|AJ002783.1|NGAJ2783 Neisseria gonorrhoeae aroK, aroB, yafJ genes and open reading frame Length = 3502 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 attcgcccgtcgccgacctcgtgc 376 |||| ||||||||||||||||||| Sbjct: 2473 attcccccgtcgccgacctcgtgc 2496
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 attcgcccgtcgccgacctcgtgc 376 |||| ||||||||||||||||||| Sbjct: 1907661 attcccccgtcgccgacctcgtgc 1907684
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ggctatgttttatttctgggaaac 542 ||||||||||||||||| |||||| Sbjct: 620769 ggctatgttttatttcttggaaac 620746
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgcccccgagctcgtcgtagccgc 192 |||||||||||||||||| ||||| Sbjct: 88582 cgcccccgagctcgtcgtcgccgc 88605
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgcccccgagctcgtcgtagccgc 192 |||||||||||||||||| ||||| Sbjct: 8026 cgcccccgagctcgtcgtcgccgc 8049
>emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in linkage group 24, complete sequence Length = 167578 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 tttaaataaaagttactttg 566 |||||||||||||||||||| Sbjct: 138765 tttaaataaaagttactttg 138746
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 attcgcccgtcgccgacctcgtgc 376 |||| ||||||||||||||||||| Sbjct: 99551 attcccccgtcgccgacctcgtgc 99528
>emb|AL160314.7|CNS01RH3 Human chromosome 14 DNA sequence BAC C-2555K7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208953 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 aaacacagtttaaataaaag 558 |||||||||||||||||||| Sbjct: 130684 aaacacagtttaaataaaag 130665
>ref|XM_672524.1| Plasmodium berghei strain ANKA translation initiation factor EF-1 (PB000820.03.0) partial mRNA Length = 357 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tatgttttatttctgggaaa 541 |||||||||||||||||||| Sbjct: 206 tatgttttatttctgggaaa 225
>emb|AL935155.13| Mouse DNA sequence from clone RP23-334M3 on chromosome 2, complete sequence Length = 123205 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 tttaaataaaagttactttg 566 |||||||||||||||||||| Sbjct: 23794 tttaaataaaagttactttg 23813
>emb|AL731794.13| Mouse DNA sequence from clone RP23-232L4 on chromosome X, complete sequence Length = 142298 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tatgttttatttctgggaaa 541 |||||||||||||||||||| Sbjct: 94440 tatgttttatttctgggaaa 94421 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 87,894,332 Number of extensions: 4481012 Number of successful extensions: 95941 Number of sequences better than 10.0: 30 Number of HSP's gapped: 95941 Number of HSP's successfully gapped: 30 Length of query: 588 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 566 Effective length of database: 18,508,616,841 Effective search space: 10475877132006 Effective search space used: 10475877132006 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)