| Clone Name | FLbaf65n12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830787.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111E10, full insert sequence Length = 1786 Score = 434 bits (219), Expect = e-118 Identities = 354/399 (88%) Strand = Plus / Plus Query: 233 cggcggcggcggcgactcaagtgggcacttacttcctccgcaactactacaatctgctgc 292 ||||||||||||||||||| || ||||| |||||||| || ||||||||||| || |||| Sbjct: 199 cggcggcggcggcgactcaggtcggcacctacttccttcggaactactacaacctcctgc 258 Query: 293 agcagaaccccgatgtcgtccaccagttctacagcgaagcaagcaccatggtccgcgtcg 352 |||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||||| Sbjct: 259 agcagagccccgatgtcgtccaccagttctacaacgacgccagcaccatggtccgcgtcg 318 Query: 353 acgacctcaacgggactaacaccactgctaactccatgatggatatacactcccttatca 412 |||||||| || || |||||||| || | | |||||||||||||||||||||| || | Sbjct: 319 acgacctcgctggaaccaacaccaccgccagcaccatgatggatatacactccctcatta 378 Query: 413 tgtccctcaatttcacccaaatcgagataaaaactgccaactttgccaactcatggggag 472 ||||| | |||||||||||||||||||| ||||| ||||||||| |||||||||||| | Sbjct: 379 tgtccttgaatttcacccaaatcgagatcaaaacagccaactttctcaactcatggggtg 438 Query: 473 atggggtgctagtgatggtctctggtcttgtacagacgaaagagtacagcaaccaaagga 532 |||| |||||||| ||||| ||||||||||||||||| || ||||||||| ||||||||| Sbjct: 439 atggtgtgctagttatggtatctggtcttgtacagaccaaggagtacagccaccaaagga 498 Query: 533 aatttatccagatgtttttccttgcgcctcaggagaaaggttactttgtgctcaatgatt 592 |||| |||||||||||||||||||| || ||||| || ||||||||||| |||||||||| Sbjct: 499 aattcatccagatgtttttccttgctccccaggaaaagggttactttgttctcaatgatt 558 Query: 593 atttccactttgttgaccaagaacaagtgcaacctgcac 631 ||||||| || |||||| |||| |||||||||||||||| Sbjct: 559 atttccatttcgttgacgaagagcaagtgcaacctgcac 597 Score = 321 bits (162), Expect = 5e-84 Identities = 246/274 (89%) Strand = Plus / Plus Query: 1120 gatgaagaagagagcaaatctgtttatgttgggaatgtgccgcaaaatgtaactgaggct 1179 ||||| ||||||||||||||||| ||||||||||| ||||| |||| |||||||| Sbjct: 1100 gatgatgaagagagcaaatctgtctatgttgggaacgtgccatcttctgtatctgaggct 1159 Query: 1180 gatcttgagaatgagttcaagaagtttggccagctcatccctgatggtgttgctatcaga 1239 ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| Sbjct: 1160 gatcttgagaatgagttcaagaagtttgggcggctcattcctgatggtgttgctatcaga 1219 Query: 1240 agccgaaaggagactggtggctactatgcttttgtggaattcgaggaactgagtggtgta 1299 ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 1220 agccgcaaggagaccggaggctactatgcgttcgtggaattcgaagaacttagtggtgtt 1279 Query: 1300 cacaatgcattgagggcttcaccacttgaaataaatgggcggcagatatatgttgaggag 1359 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1280 cacaatgcattgaaggcttcaccaattgaaataaatgggcggcagatatatgttgaggag 1339 Query: 1360 cggaagcctaatagtggaataaggggaggaagaa 1393 ||||||||||| || || ||||| || ||||||| Sbjct: 1340 cggaagcctaacagcggcataagaggtggaagaa 1373 Score = 123 bits (62), Expect = 2e-24 Identities = 113/130 (86%) Strand = Plus / Plus Query: 727 gctgttccagtaacatctgaagaaaatgatgctgttgacagttacacttactctgagcca 786 ||||| ||| ||||||||||||||| |||||||||||| | || ||||||||||||||| Sbjct: 687 gctgtcccaataacatctgaagaaagtgatgctgttgagaactatacttactctgagcca 746 Query: 787 ccacagcaagtggtttctcagtcggacaactggggagatgaatctcttcaagaggaacca 846 ||||||||||| ||||||||||| ||||| ||||||||||| |||||| || |||||| Sbjct: 747 ccacagcaagtagtttctcagtcagacaattggggagatgagcctcttcctgaagaacca 806 Query: 847 ctgtcttcct 856 | ||||||| Sbjct: 807 atttcttcct 816 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1483 taccagcgtgtccctcaccacgagaggggcattttgggg 1521 ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1478 taccagcgtgttcctcaccatgagaggggcattttgggg 1516
>dbj|AK103571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132N07, full insert sequence Length = 1800 Score = 434 bits (219), Expect = e-118 Identities = 351/395 (88%) Strand = Plus / Plus Query: 237 ggcggcggcgactcaagtgggcacttacttcctccgcaactactacaatctgctgcagca 296 ||||||||||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 222 ggcggcggcgactcaggtcggcacctacttccttcgcaactactacaacctcctgcagca 281 Query: 297 gaaccccgatgtcgtccaccagttctacagcgaagcaagcaccatggtccgcgtcgacga 356 || |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| Sbjct: 282 gagccccgatgtcgtccaccagttctacaacgacgccagcaccatggtccgcgtcgacga 341 Query: 357 cctcaacgggactaacaccactgctaactccatgatggatatacactcccttatcatgtc 416 |||| || || |||||||| || | | |||||||||||||||||||||| || ||||| Sbjct: 342 cctcgctggaaccaacaccaccgccagcaccatgatggatatacactccctcattatgtc 401 Query: 417 cctcaatttcacccaaatcgagataaaaactgccaactttgccaactcatggggagatgg 476 | | |||||||||||||||||||| ||||| ||||||||| |||||||||||| ||||| Sbjct: 402 cttgaatttcacccaaatcgagatcaaaacagccaactttctcaactcatggggtgatgg 461 Query: 477 ggtgctagtgatggtctctggtcttgtacagacgaaagagtacagcaaccaaaggaaatt 536 |||||||| ||||| ||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 462 tgtgctagttatggtatctggtcttgtacagaccaaggagtacagccaccaaaggaaatt 521 Query: 537 tatccagatgtttttccttgcgcctcaggagaaaggttactttgtgctcaatgattattt 596 |||||||||||||||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 522 catccagatgtttttccttgctccccaggaaaagggttactttgttctcaatgattattt 581 Query: 597 ccactttgttgaccaagaacaagtgcaacctgcac 631 ||| || |||||| |||| |||||||||||||||| Sbjct: 582 ccatttcgttgacgaagagcaagtgcaacctgcac 616 Score = 321 bits (162), Expect = 5e-84 Identities = 246/274 (89%) Strand = Plus / Plus Query: 1120 gatgaagaagagagcaaatctgtttatgttgggaatgtgccgcaaaatgtaactgaggct 1179 ||||| ||||||||||||||||| ||||||||||| ||||| |||| |||||||| Sbjct: 1114 gatgatgaagagagcaaatctgtctatgttgggaacgtgccatcttctgtatctgaggct 1173 Query: 1180 gatcttgagaatgagttcaagaagtttggccagctcatccctgatggtgttgctatcaga 1239 ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| Sbjct: 1174 gatcttgagaatgagttcaagaagtttgggcggctcattcctgatggtgttgctatcaga 1233 Query: 1240 agccgaaaggagactggtggctactatgcttttgtggaattcgaggaactgagtggtgta 1299 ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 1234 agccgcaaggagaccggaggctactatgcgttcgtggaattcgaagaacttagtggtgtt 1293 Query: 1300 cacaatgcattgagggcttcaccacttgaaataaatgggcggcagatatatgttgaggag 1359 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1294 cacaatgcattgaaggcttcaccaattgaaataaatgggcggcagatatatgttgaggag 1353 Query: 1360 cggaagcctaatagtggaataaggggaggaagaa 1393 ||||||||||| || || ||||| || ||||||| Sbjct: 1354 cggaagcctaacagcggcataagaggtggaagaa 1387 Score = 196 bits (99), Expect = 2e-46 Identities = 224/265 (84%), Gaps = 3/265 (1%) Strand = Plus / Plus Query: 727 gctgttccagtaacatctgaagaaaatgatgctgttgacagttacacttactctgagcca 786 ||||| ||| ||||||||||||||| |||||||||||| | || ||||||||||||||| Sbjct: 706 gctgtcccaataacatctgaagaaagtgatgctgttgagaactatacttactctgagcca 765 Query: 787 ccacagcaagtggtttctcagtcggacaactggggagatgaatctcttcaagaggaacca 846 ||||||||||| ||||||||||| ||||| ||||||||||| |||||| || |||||| Sbjct: 766 ccacagcaagtagtttctcagtcagacaattggggagatgagcctcttcctgaagaacca 825 Query: 847 ctgtcttcctactcgaatggaatggcgatggcgctagaggagccagcgcaacctccacct 906 | ||||||| | ||||||||||||||||| | |||||||||| |||| |||||||| Sbjct: 826 atttcttcctttacaaatggaatggcgatggcaccggaggagccagtgcaatctccacct 885 Query: 907 gt---gcagcctcatattgaggaacctgttggggagcctgtaaagaagacctatgcttct 963 || | |||||| | |||||||||||||| || || ||||||||||||||||| || Sbjct: 886 gttccacctcctcatgtagaggaacctgttggtgaaccagtaaagaagacctatgcctcc 945 Query: 964 attctaagaactgcaaaagccccac 988 ||||||||||| |||||||| |||| Sbjct: 946 attctaagaaccgcaaaagctccac 970 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1483 taccagcgtgtccctcaccacgagaggggcattttgggg 1521 ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1492 taccagcgtgttcctcaccatgagaggggcattttgggg 1530
>ref|NM_001052328.1| Oryza sativa (japonica cultivar-group) Os02g0131700 (Os02g0131700) mRNA, complete cds Length = 1380 Score = 315 bits (159), Expect = 3e-82 Identities = 228/251 (90%) Strand = Plus / Plus Query: 1120 gatgaagaagagagcaaatctgtttatgttgggaatgtgccgcaaaatgtaactgaggct 1179 ||||| ||||||||||||||||| ||||||||||| ||||| |||| |||||||| Sbjct: 898 gatgatgaagagagcaaatctgtctatgttgggaacgtgccatcttctgtatctgaggct 957 Query: 1180 gatcttgagaatgagttcaagaagtttggccagctcatccctgatggtgttgctatcaga 1239 ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| Sbjct: 958 gatcttgagaatgagttcaagaagtttgggcggctcattcctgatggtgttgctatcaga 1017 Query: 1240 agccgaaaggagactggtggctactatgcttttgtggaattcgaggaactgagtggtgta 1299 ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 1018 agccgcaaggagaccggaggctactatgcgttcgtggaattcgaagaacttagtggtgtt 1077 Query: 1300 cacaatgcattgagggcttcaccacttgaaataaatgggcggcagatatatgttgaggag 1359 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1078 cacaatgcattgaaggcttcaccaattgaaataaatgggcggcagatatatgttgaggag 1137 Query: 1360 cggaagcctaa 1370 ||||||||||| Sbjct: 1138 cggaagcctaa 1148 Score = 272 bits (137), Expect = 4e-69 Identities = 224/253 (88%) Strand = Plus / Plus Query: 233 cggcggcggcggcgactcaagtgggcacttacttcctccgcaactactacaatctgctgc 292 ||||||||||||||||||| || ||||| |||||||| |||||||||||||| || |||| Sbjct: 14 cggcggcggcggcgactcaggtcggcacctacttccttcgcaactactacaacctcctgc 73 Query: 293 agcagaaccccgatgtcgtccaccagttctacagcgaagcaagcaccatggtccgcgtcg 352 |||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||||| Sbjct: 74 agcagagccccgatgtcgtccaccagttctacaacgacgccagcaccatggtccgcgtcg 133 Query: 353 acgacctcaacgggactaacaccactgctaactccatgatggatatacactcccttatca 412 |||||||| || || |||||||| || | | |||||||||||||||||||||| || | Sbjct: 134 acgacctcgctggaaccaacaccaccgccagcaccatgatggatatacactccctcatta 193 Query: 413 tgtccctcaatttcacccaaatcgagataaaaactgccaactttgccaactcatggggag 472 ||||| | |||||||||||||||||||| ||||| ||||||||| |||||||||||| | Sbjct: 194 tgtccttgaatttcacccaaatcgagatcaaaacagccaactttctcaactcatggggtg 253 Query: 473 atggggtgctagt 485 |||| |||||||| Sbjct: 254 atggtgtgctagt 266 Score = 196 bits (99), Expect = 2e-46 Identities = 224/265 (84%), Gaps = 3/265 (1%) Strand = Plus / Plus Query: 727 gctgttccagtaacatctgaagaaaatgatgctgttgacagttacacttactctgagcca 786 ||||| ||| ||||||||||||||| |||||||||||| | || ||||||||||||||| Sbjct: 490 gctgtcccaataacatctgaagaaagtgatgctgttgagaactatacttactctgagcca 549 Query: 787 ccacagcaagtggtttctcagtcggacaactggggagatgaatctcttcaagaggaacca 846 ||||||||||| ||||||||||| ||||| ||||||||||| |||||| || |||||| Sbjct: 550 ccacagcaagtagtttctcagtcagacaattggggagatgagcctcttcctgaagaacca 609 Query: 847 ctgtcttcctactcgaatggaatggcgatggcgctagaggagccagcgcaacctccacct 906 | ||||||| | ||||||||||||||||| | |||||||||| |||| |||||||| Sbjct: 610 atttcttcctttacaaatggaatggcgatggcaccggaggagccagtgcaatctccacct 669 Query: 907 gt---gcagcctcatattgaggaacctgttggggagcctgtaaagaagacctatgcttct 963 || | |||||| | |||||||||||||| || || ||||||||||||||||| || Sbjct: 670 gttccacctcctcatgtagaggaacctgttggtgaaccagtaaagaagacctatgcctcc 729 Query: 964 attctaagaactgcaaaagccccac 988 ||||||||||| |||||||| |||| Sbjct: 730 attctaagaaccgcaaaagctccac 754 Score = 147 bits (74), Expect = 2e-31 Identities = 107/118 (90%) Strand = Plus / Plus Query: 514 gagtacagcaaccaaaggaaatttatccagatgtttttccttgcgcctcaggagaaaggt 573 ||||||||| ||||||||||||| |||||||||||||||||||| || ||||| || ||| Sbjct: 277 gagtacagccaccaaaggaaattcatccagatgtttttccttgctccccaggaaaagggt 336 Query: 574 tactttgtgctcaatgattatttccactttgttgaccaagaacaagtgcaacctgcac 631 |||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||| Sbjct: 337 tactttgttctcaatgattatttccatttcgttgacgaagagcaagtgcaacctgcac 394 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1483 taccagcgtgtccctcaccacgagaggggcattttgggg 1521 ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1321 taccagcgtgttcctcaccatgagaggggcattttgggg 1359
>gb|BT016230.1| Zea mays clone Contig63 mRNA sequence Length = 1112 Score = 293 bits (148), Expect = 1e-75 Identities = 244/276 (88%) Strand = Plus / Plus Query: 1116 ccatgatgaagaagagagcaaatctgtttatgttgggaatgtgccgcaaaatgtaactga 1175 ||||||||| ||||||||||||||||| ||||| || || ||||| | ||||| ||| Sbjct: 424 ccatgatgacgaagagagcaaatctgtgtatgtcggcaacgtgccatcatctgtaagtga 483 Query: 1176 ggctgatcttgagaatgagttcaagaagtttggccagctcatccctgatggtgttgctat 1235 |||||||||||| || ||||||||||| ||||||| ||| || ||||| ||||||||||| Sbjct: 484 ggctgatcttgaaaacgagttcaagaaatttggccggcttattcctgacggtgttgctat 543 Query: 1236 cagaagccgaaaggagactggtggctactatgcttttgtggaattcgaggaactgagtgg 1295 ||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| || || Sbjct: 544 cagaagccgaaaggagactggcggctattatgctttcgtggaattcgaggaactcagcgg 603 Query: 1296 tgtacacaatgcattgagggcttcaccacttgaaataaatgggcggcagatatatgttga 1355 |||||||||||| || | |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 604 tgtacacaatgcgttaaaggcttcaccaattgaaataaatgggcggcagatatatgttga 663 Query: 1356 ggagcggaagcctaatagtggaataaggggaggaag 1391 |||| ||||||| ||||| |||||||| || ||||| Sbjct: 664 ggagaggaagccaaatagcggaataagaggtggaag 699 Score = 50.1 bits (25), Expect = 0.028 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1442 gaggtgacgagtacaacggtagccgtgggaagtcgaacggttaccagcgtgtccctcacc 1501 |||| ||||||||||| ||| |||||||| ||| ||||||||| |||| ||||||| Sbjct: 753 gaggcgacgagtacaatagtaaccgtgggaggtcaaacggttacggtcgtgctcctcacc 812 Query: 1502 acgagaggggcat 1514 | ||||||||||| Sbjct: 813 aagagaggggcat 825
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 276 bits (139), Expect = 3e-70 Identities = 214/239 (89%) Strand = Plus / Minus Query: 393 ggatatacactcccttatcatgtccctcaatttcacccaaatcgagataaaaactgccaa 452 ||||||||||||||| || |||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 1654551 ggatatacactccctcattatgtccttgaatttcacccaaatcgagatcaaaacagccaa 1654492 Query: 453 ctttgccaactcatggggagatggggtgctagtgatggtctctggtcttgtacagacgaa 512 |||| |||||||||||| ||||| |||||||| ||||| ||||||||||||||||| || Sbjct: 1654491 ctttctcaactcatggggtgatggtgtgctagttatggtatctggtcttgtacagaccaa 1654432 Query: 513 agagtacagcaaccaaaggaaatttatccagatgtttttccttgcgcctcaggagaaagg 572 ||||||||| ||||||||||||| |||||||||||||||||||| || ||||| || || Sbjct: 1654431 ggagtacagccaccaaaggaaattcatccagatgtttttccttgctccccaggaaaaggg 1654372 Query: 573 ttactttgtgctcaatgattatttccactttgttgaccaagaacaagtgcaacctgcac 631 ||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||| Sbjct: 1654371 ttactttgttctcaatgattatttccatttcgttgacgaagagcaagtgcaacctgcac 1654313 Score = 170 bits (86), Expect = 1e-38 Identities = 199/236 (84%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 727 gctgttccagtaacatctgaagaaaatgatgctgttgacagttacacttactctgagcca 786 ||||| ||| ||||||||||||||| |||||||||||| | || ||||||||||||||| Sbjct: 1653846 gctgtcccaataacatctgaagaaagtgatgctgttgagaactatacttactctgagcca 1653787 Query: 787 ccacagcaagtggtttctcagtcggacaactggggagatgaatctcttcaagaggaacca 846 ||||||||||| ||||||||||| ||||| ||||||||||| |||||| || |||||| Sbjct: 1653786 ccacagcaagtagtttctcagtcagacaattggggagatgagcctcttcctgaagaacca 1653727 Query: 847 ctgtcttcctactcgaatggaatggcgatggcgctagaggagccagcgcaacctccacct 906 | ||||||| | ||||||||||||||||| | |||||||||| |||| |||||||| Sbjct: 1653726 atttcttcctttacaaatggaatggcgatggcaccggaggagccagtgcaatctccacct 1653667 Query: 907 gt---gcagcctcatattgaggaacctgttggggagcctgtaaagaagacctatgc 959 || | |||||| | |||||||||||||| || || ||||||||||||||||| Sbjct: 1653666 gttccacctcctcatgtagaggaacctgttggtgaaccagtaaagaagacctatgc 1653611 Score = 145 bits (73), Expect = 6e-31 Identities = 97/105 (92%) Strand = Plus / Minus Query: 256 ggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtccac 315 ||||| |||||||| |||||||||||||| || |||||||||| |||||||||||||||| Sbjct: 1655009 ggcacctacttccttcgcaactactacaacctcctgcagcagagccccgatgtcgtccac 1654950 Query: 316 cagttctacagcgaagcaagcaccatggtccgcgtcgacgacctc 360 |||||||||| ||| || ||||||||||||||||||||||||||| Sbjct: 1654949 cagttctacaacgacgccagcaccatggtccgcgtcgacgacctc 1654905 Score = 139 bits (70), Expect = 4e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 1128 agagagcaaatctgtttatgttgggaatgtgccgcaaaatgtaactgaggctgatcttga 1187 ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||| Sbjct: 1653240 agagagcaaatctgtctatgttgggaacgtgccatcttctgtatctgaggctgatcttga 1653181 Query: 1188 gaatgagttcaagaagtttggccagctcatccctgatggtgttgctatcagaagccgaaa 1247 ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||| || Sbjct: 1653180 gaatgagttcaagaagtttgggcggctcattcctgatggtgttgctatcagaagccgcaa 1653121 Query: 1248 gg 1249 || Sbjct: 1653120 gg 1653119 Score = 107 bits (54), Expect = 1e-19 Identities = 72/78 (92%) Strand = Plus / Minus Query: 1314 ggcttcaccacttgaaataaatgggcggcagatatatgttgaggagcggaagcctaatag 1373 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1652734 ggcttcaccaattgaaataaatgggcggcagatatatgttgaggagcggaagcctaacag 1652675 Query: 1374 tggaataaggggaggaag 1391 || ||||| || ||||| Sbjct: 1652674 cggcataagaggtggaag 1652657 Score = 75.8 bits (38), Expect = 5e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 1247 aggagactggtggctactatgcttttgtggaattcgaggaactgagtggtgtacacaatg 1306 ||||||| || ||||||||||| || ||||||||||| ||||| |||||||| ||||||| Sbjct: 1653043 aggagaccggaggctactatgcgttcgtggaattcgaagaacttagtggtgttcacaatg 1652984 Query: 1307 cattga 1312 |||||| Sbjct: 1652983 cattga 1652978 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1483 taccagcgtgtccctcaccacgagaggggcattttgggg 1521 ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1652415 taccagcgtgttcctcaccatgagaggggcattttgggg 1652377 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Minus Query: 550 ttccttgcgcctcaggagaaaggttactttgtgctcaa 587 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 17614760 ttcctggcgccgcaggagaagggctactttgtgctcaa 17614723
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 276 bits (139), Expect = 3e-70 Identities = 214/239 (89%) Strand = Plus / Minus Query: 393 ggatatacactcccttatcatgtccctcaatttcacccaaatcgagataaaaactgccaa 452 ||||||||||||||| || |||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 91654 ggatatacactccctcattatgtccttgaatttcacccaaatcgagatcaaaacagccaa 91595 Query: 453 ctttgccaactcatggggagatggggtgctagtgatggtctctggtcttgtacagacgaa 512 |||| |||||||||||| ||||| |||||||| ||||| ||||||||||||||||| || Sbjct: 91594 ctttctcaactcatggggtgatggtgtgctagttatggtatctggtcttgtacagaccaa 91535 Query: 513 agagtacagcaaccaaaggaaatttatccagatgtttttccttgcgcctcaggagaaagg 572 ||||||||| ||||||||||||| |||||||||||||||||||| || ||||| || || Sbjct: 91534 ggagtacagccaccaaaggaaattcatccagatgtttttccttgctccccaggaaaaggg 91475 Query: 573 ttactttgtgctcaatgattatttccactttgttgaccaagaacaagtgcaacctgcac 631 ||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||| Sbjct: 91474 ttactttgttctcaatgattatttccatttcgttgacgaagagcaagtgcaacctgcac 91416 Score = 170 bits (86), Expect = 1e-38 Identities = 199/236 (84%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 727 gctgttccagtaacatctgaagaaaatgatgctgttgacagttacacttactctgagcca 786 ||||| ||| ||||||||||||||| |||||||||||| | || ||||||||||||||| Sbjct: 90949 gctgtcccaataacatctgaagaaagtgatgctgttgagaactatacttactctgagcca 90890 Query: 787 ccacagcaagtggtttctcagtcggacaactggggagatgaatctcttcaagaggaacca 846 ||||||||||| ||||||||||| ||||| ||||||||||| |||||| || |||||| Sbjct: 90889 ccacagcaagtagtttctcagtcagacaattggggagatgagcctcttcctgaagaacca 90830 Query: 847 ctgtcttcctactcgaatggaatggcgatggcgctagaggagccagcgcaacctccacct 906 | ||||||| | ||||||||||||||||| | |||||||||| |||| |||||||| Sbjct: 90829 atttcttcctttacaaatggaatggcgatggcaccggaggagccagtgcaatctccacct 90770 Query: 907 gt---gcagcctcatattgaggaacctgttggggagcctgtaaagaagacctatgc 959 || | |||||| | |||||||||||||| || || ||||||||||||||||| Sbjct: 90769 gttccacctcctcatgtagaggaacctgttggtgaaccagtaaagaagacctatgc 90714 Score = 145 bits (73), Expect = 6e-31 Identities = 97/105 (92%) Strand = Plus / Minus Query: 256 ggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtccac 315 ||||| |||||||| |||||||||||||| || |||||||||| |||||||||||||||| Sbjct: 92112 ggcacctacttccttcgcaactactacaacctcctgcagcagagccccgatgtcgtccac 92053 Query: 316 cagttctacagcgaagcaagcaccatggtccgcgtcgacgacctc 360 |||||||||| ||| || ||||||||||||||||||||||||||| Sbjct: 92052 cagttctacaacgacgccagcaccatggtccgcgtcgacgacctc 92008 Score = 139 bits (70), Expect = 4e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 1128 agagagcaaatctgtttatgttgggaatgtgccgcaaaatgtaactgaggctgatcttga 1187 ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||| Sbjct: 90343 agagagcaaatctgtctatgttgggaacgtgccatcttctgtatctgaggctgatcttga 90284 Query: 1188 gaatgagttcaagaagtttggccagctcatccctgatggtgttgctatcagaagccgaaa 1247 ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||| || Sbjct: 90283 gaatgagttcaagaagtttgggcggctcattcctgatggtgttgctatcagaagccgcaa 90224 Query: 1248 gg 1249 || Sbjct: 90223 gg 90222 Score = 107 bits (54), Expect = 1e-19 Identities = 72/78 (92%) Strand = Plus / Minus Query: 1314 ggcttcaccacttgaaataaatgggcggcagatatatgttgaggagcggaagcctaatag 1373 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 89837 ggcttcaccaattgaaataaatgggcggcagatatatgttgaggagcggaagcctaacag 89778 Query: 1374 tggaataaggggaggaag 1391 || ||||| || ||||| Sbjct: 89777 cggcataagaggtggaag 89760 Score = 75.8 bits (38), Expect = 5e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 1247 aggagactggtggctactatgcttttgtggaattcgaggaactgagtggtgtacacaatg 1306 ||||||| || ||||||||||| || ||||||||||| ||||| |||||||| ||||||| Sbjct: 90146 aggagaccggaggctactatgcgttcgtggaattcgaagaacttagtggtgttcacaatg 90087 Query: 1307 cattga 1312 |||||| Sbjct: 90086 cattga 90081 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1483 taccagcgtgtccctcaccacgagaggggcattttgggg 1521 ||||||||||| |||||||| |||||||||||||||||| Sbjct: 89518 taccagcgtgttcctcaccatgagaggggcattttgggg 89480
>gb|DQ427199.1| Sorghum propinquum locus BCD0349 genomic sequence Length = 657 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427198.1| Sorghum bicolor voucher PI585454 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427197.1| Sorghum bicolor voucher PI267539 locus BCD0349 genomic sequence Length = 666 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427196.1| Sorghum bicolor voucher PI267408 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427195.1| Sorghum bicolor voucher PI221607 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427194.1| Sorghum bicolor voucher PI152702 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427193.1| Sorghum bicolor voucher NSL92371 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427192.1| Sorghum bicolor voucher NSL87902b locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427191.1| Sorghum bicolor voucher NSL87902a locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427190.1| Sorghum bicolor voucher NSL87666 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427189.1| Sorghum bicolor voucher NSL77217 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427188.1| Sorghum bicolor voucher NSL77034 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427187.1| Sorghum bicolor voucher NSL56174 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427186.1| Sorghum bicolor voucher NSL56003 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427185.1| Sorghum bicolor voucher NSL55243 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427184.1| Sorghum bicolor voucher NSL51030 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>gb|DQ427183.1| Sorghum bicolor voucher BTx623 locus BCD0349 genomic sequence Length = 662 Score = 121 bits (61), Expect = 9e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 253 gtgggcacttacttcctccgcaactactacaatctgctgcagcagaaccccgatgtcgtc 312 ||||| ||||||||||| || ||||||||||| |||||||| || | ||| ||||| ||| Sbjct: 177 gtggggacttacttcctgcgaaactactacaacctgctgcaacaaaccccggatgtagtc 236 Query: 313 caccagttctacagcgaagcaagcaccatggtccgcgtcgacgacctca 361 |||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 237 caccagttctacagtgatgctagcaccatggtccgcgtcgacgacctca 285
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 274 aactactacaatctgctgcagcagaaccccgatgtcgtccaccagttctacagcgaagca 333 ||||||| ||| || |||||||||| ||| |||||||||||||||||||||| ||| || Sbjct: 28369956 aactactgcaacctcctgcagcagagccctgatgtcgtccaccagttctacaacgacgcc 28370015 Query: 334 agcaccatggtccgcgtcgacgacctc 360 |||| ||||||| |||||||||||||| Sbjct: 28370016 agcagcatggtcggcgtcgacgacctc 28370042
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 274 aactactacaatctgctgcagcagaaccccgatgtcgtccaccagttctacagcgaagca 333 ||||||| ||| || |||||||||| ||| |||||||||||||||||||||| ||| || Sbjct: 98762 aactactgcaacctcctgcagcagagccctgatgtcgtccaccagttctacaacgacgcc 98821 Query: 334 agcaccatggtccgcgtcgacgacctc 360 |||| ||||||| |||||||||||||| Sbjct: 98822 agcagcatggtcggcgtcgacgacctc 98848
>gb|AC147517.24| Medicago truncatula clone mth2-49o4, complete sequence Length = 125519 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 547 tttttccttgcgcctcaggagaaaggttactttgtgctcaatgattatttccactttgtt 606 ||||||||||| ||||||||||| ||||| ||||| ||||||||| ||| || |||||| Sbjct: 112244 tttttccttgctcctcaggagaagggttattttgtactcaatgatatttttcagtttgtt 112303 Query: 607 ga 608 || Sbjct: 112304 ga 112305
>gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete sequence Length = 148291 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 547 tttttccttgcgcctcaggagaaaggttactttgtgctcaatgattatttccactttgtt 606 ||||||||||| ||||||||||| ||||| ||||| ||||||||| ||| || |||||| Sbjct: 100766 tttttccttgctcctcaggagaagggttattttgtactcaatgatatttttcagtttgtt 100707 Query: 607 ga 608 || Sbjct: 100706 ga 100705
>gb|AC189402.1| Brassica rapa subsp. pekinensis clone KBrB057L05, complete sequence Length = 149228 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 550 ttccttgcgcctcaggagaaaggttactttgtgctcaatgat 591 |||||||| ||||||||||| ||||| ||||| ||||||||| Sbjct: 99500 ttccttgctcctcaggagaagggttattttgttctcaatgat 99459
>dbj|AB236847.1| Trifolium pratense RNA for hypothetical protein, complete cds, clone: C465 Length = 1876 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 550 ttccttgcgcctcaggagaaaggttactttgtgctcaa 587 |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 523 ttccttgcccctcaggagaagggttattttgtgctcaa 560
>gb|BT013568.1| Lycopersicon esculentum clone 132306R, mRNA sequence Length = 1961 Score = 50.1 bits (25), Expect = 0.028 Identities = 40/45 (88%) Strand = Plus / Plus Query: 547 tttttccttgcgcctcaggagaaaggttactttgtgctcaatgat 591 ||||||||||| || ||||| ||||| |||||||| ||||||||| Sbjct: 621 tttttccttgcaccccaggaaaaaggatactttgtcctcaatgat 665
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 224 ccatggcttcggcggcggcggcga 247 |||||||||||||||||||||||| Sbjct: 3544168 ccatggcttcggcggcggcggcga 3544145
>gb|AC128668.4| Mus musculus BAC clone RP24-81D14 from chromosome 8, complete sequence Length = 211075 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 754 gatgctgttgacagttacactta 776 ||||||||||||||||||||||| Sbjct: 42904 gatgctgttgacagttacactta 42882
>gb|AC125358.4| Mus musculus BAC clone RP23-256E3 from 8, complete sequence Length = 177236 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 754 gatgctgttgacagttacactta 776 ||||||||||||||||||||||| Sbjct: 45145 gatgctgttgacagttacactta 45167
>emb|CR855074.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101A01, complete sequence Length = 111925 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 748 gaaaatgatgctgttgacagttacac 773 |||||||||||| ||||||||||||| Sbjct: 107989 gaaaatgatgcttttgacagttacac 107964
>gb|AC183799.2| Pan troglodytes BAC clone CH251-329J7 from chromosome 7, complete sequence Length = 174044 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 167396 aggcatttgagaccaacctggc 167417
>gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromosome 7, complete sequence Length = 157720 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 94297 aggcatttgagaccaacctggc 94276
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 748 gaaaatgatgctgttgacagttacac 773 |||||||||||| ||||||||||||| Sbjct: 8380382 gaaaatgatgcttttgacagttacac 8380357
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 ggcttcggcggcggcggcgact 249 |||||||||||||||||||||| Sbjct: 1875833 ggcttcggcggcggcggcgact 1875854 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 atggcttcggcggcggcggcg 246 ||||||||||||||||||||| Sbjct: 31473850 atggcttcggcggcggcggcg 31473870
>emb|AL356491.12| Human DNA sequence from clone RP11-310C13 on chromosome 9 Contains part of a novel gene, complete sequence Length = 60350 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 50255 aggcatttgagaccaacctggc 50234
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 625 cctgcacaggtgagagctcagg 646 |||||||||||||||||||||| Sbjct: 63494 cctgcacaggtgagagctcagg 63473
>emb|AL845463.7| Mouse DNA sequence from clone RP23-386K17 on chromosome 11 Contains a novel pseudogene, three novel genes and three CpG islands, complete sequence Length = 59235 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1166 atgtaactgaggctgatcttga 1187 |||||||||||||||||||||| Sbjct: 50949 atgtaactgaggctgatcttga 50928
>gb|AC018665.9| Homo sapiens chromosome 17, clone RP11-449J21, complete sequence Length = 184393 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 151941 aggcatttgagaccaacctggc 151920
>gb|AC010901.8| Homo sapiens BAC clone RP11-544J22 from 2, complete sequence Length = 78185 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 646 gaggcatttgagaccaacctgg 667 |||||||||||||||||||||| Sbjct: 68355 gaggcatttgagaccaacctgg 68376
>gb|AC115115.4| Homo sapiens BAC clone RP11-812M14 from 2, complete sequence Length = 124457 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 74187 aggcatttgagaccaacctggc 74166
>gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, complete sequence Length = 139484 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 37995 aggcatttgagaccaacctggc 37974
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 ggcttcggcggcggcggcgact 249 |||||||||||||||||||||| Sbjct: 117215 ggcttcggcggcggcggcgact 117236
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Minus Query: 550 ttccttgcgcctcaggagaaaggttactttgtgctcaa 587 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 84678 ttcctggcgccgcaggagaagggctactttgtgctcaa 84641
>dbj|AK070143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O14, full insert sequence Length = 2040 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 550 ttccttgcgcctcaggagaaaggttactttgtgctcaa 587 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 473 ttcctggcgccgcaggagaagggctactttgtgctcaa 510
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17, complete sequence Length = 99093 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 748 gaaaatgatgctgttgacagttacac 773 |||||||||||| ||||||||||||| Sbjct: 92950 gaaaatgatgcttttgacagttacac 92925
>dbj|D00591.1|HUMRCC1 Homo sapiens RCC1 gene, exons 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, complete cds Length = 34641 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctggc 668 |||||||||||||||||||||| Sbjct: 33153 aggcatttgagaccaacctggc 33132
>gb|DQ244870.1| Zea mays clone 11266 mRNA sequence Length = 572 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 ccatggcttcggcggcggcgg 244 ||||||||||||||||||||| Sbjct: 126 ccatggcttcggcggcggcgg 106
>dbj|AK239137.1| Sus scrofa mRNA, clone:THY010066E02, expressed in thymus Length = 2323 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1541 tgccgaaaggaggaagcataagagg 1565 |||||||||||||||||| |||||| Sbjct: 102 tgccgaaaggaggaagcagaagagg 126
>dbj|AK234757.1| Sus scrofa mRNA, clone:OVRM10013G12, expressed in ovary Length = 1286 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1118 atgatgaagaagagagcaaat 1138 ||||||||||||||||||||| Sbjct: 296 atgatgaagaagagagcaaat 316
>ref|NM_001071739.1| Oryza sativa (japonica cultivar-group) Os10g0545000 (Os10g0545000) mRNA, complete cds Length = 1711 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 ctccccatggcttcggcggcggcggcgac 248 ||||||||||| |||||||||||||||| Sbjct: 52 ctccccatggcggcggcggcggcggcgac 24
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ttcggcggcggcggcgactca 251 ||||||||||||||||||||| Sbjct: 18922937 ttcggcggcggcggcgactca 18922957 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 ttgagaatgagttcaagaagt 1204 ||||||||||||||||||||| Sbjct: 19862123 ttgagaatgagttcaagaagt 19862143
>emb|CT824638.9| Pig DNA sequence from clone CH242-207I19 on chromosome 7, complete sequence Length = 195004 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 626 ctgcacaggtgagagctcaggaggc 650 |||||| |||||||||||||||||| Sbjct: 123006 ctgcactggtgagagctcaggaggc 122982
>gb|AC187520.3| Pan troglodytes BAC clone CH251-641K22 from chromosome 7, complete sequence Length = 189666 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 217 aggcatttgagaccaacctgg 237
>gb|CP000389.1| Mesorhizobium sp. BNC1 plasmid 1, complete sequence Length = 343931 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccatggcttcggcggcggcgg 244 ||||||||||||||||||||| Sbjct: 170805 ccatggcttcggcggcggcgg 170825
>ref|XR_010476.1| PREDICTED: Macaca mulatta similar to otoferlin isoform a (LOC696717), mRNA Length = 5955 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gggagatgaatctcttcaagaggaa 843 ||||||||| ||||||||||||||| Sbjct: 402 gggagatgagtctcttcaagaggaa 426
>gb|AC163739.2| Pan troglodytes BAC clone CH251-503F22 from chromosome unknown, complete sequence Length = 220347 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 ggcatttgagaccaacctggc 668 ||||||||||||||||||||| Sbjct: 170492 ggcatttgagaccaacctggc 170472
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 ctctccctcttagatcttgcccgcg 181 ||||||||||| ||||||||||||| Sbjct: 839577 ctctccctcttcgatcttgcccgcg 839601
>gb|BC072728.1| Xenopus laevis MGC79070 protein, mRNA (cDNA clone MGC:79070 IMAGE:4959752), complete cds Length = 3667 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 917 atattgaggaacctgttgggg 937 ||||||||||||||||||||| Sbjct: 1914 atattgaggaacctgttgggg 1934
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ttcggcggcggcggcgactca 251 ||||||||||||||||||||| Sbjct: 137031 ttcggcggcggcggcgactca 137051
>gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence Length = 176345 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 ccaactcatggggagatgggg 478 ||||||||||||||||||||| Sbjct: 117968 ccaactcatggggagatgggg 117988
>gb|AC093126.2| Papio anubis clone RP41-231J21, complete sequence Length = 181792 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 41397 aggcatttgagaccaacctgg 41377
>gb|AC124068.6| Homo sapiens chromosome 15, clone RP11-217B1, complete sequence Length = 172505 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 64537 aggcatttgagaccaacctgg 64557
>ref|NM_138018.2| Drosophila melanogaster morula CG3060-RA (mr), mRNA Length = 2557 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 ttgagaatgagttcaagaagt 1204 ||||||||||||||||||||| Sbjct: 1866 ttgagaatgagttcaagaagt 1886
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cccatggcttcggcggcggcg 243 ||||||||||||||||||||| Sbjct: 4339857 cccatggcttcggcggcggcg 4339837
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccatggcttcggcggcggcgg 244 ||||||||||||||||||||| Sbjct: 6775175 ccatggcttcggcggcggcgg 6775195
>gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, complete sequence Length = 147662 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 107282 aggcatttgagaccaacctgg 107262
>gb|AY129297.1| Drosophila melanogaster anaphase-promoting complex subunit 2 (mr) mRNA, complete cds Length = 2409 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 ttgagaatgagttcaagaagt 1204 ||||||||||||||||||||| Sbjct: 1790 ttgagaatgagttcaagaagt 1810
>ref|NM_001034453.1| Bos taurus similar to CG14367-PA (MGC128282), mRNA gb|BC102896.1| Bos taurus similar to CG14367-PA, mRNA (cDNA clone MGC:128282 IMAGE:7984092), complete cds Length = 1134 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1118 atgatgaagaagagagcaaat 1138 ||||||||||||||||||||| Sbjct: 234 atgatgaagaagagagcaaat 254
>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence Length = 129203 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 45429 aggcatttgagaccaacctgg 45409
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 ctccccatggcttcggcggcggcggcgac 248 ||||||||||| |||||||||||||||| Sbjct: 44877 ctccccatggcggcggcggcggcggcgac 44905
>gb|AC110054.4| Homo sapiens chromosome 15, clone CTD-2116N17, complete sequence Length = 164857 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 18113 aggcatttgagaccaacctgg 18133
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 ctccccatggcttcggcggcggcggcgac 248 ||||||||||| |||||||||||||||| Sbjct: 20782478 ctccccatggcggcggcggcggcggcgac 20782506
>emb|AL589655.5| Human DNA sequence from clone RP11-420A21 on chromosome 6 Contains a pseudogene similar to an integrin Alpha-E precursor fragment and part of the TEX27 gene for testis expressed sequence 27 (FLJ13222), complete sequence Length = 160789 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 27098 aggcatttgagaccaacctgg 27118
>emb|AL513218.27| Human DNA sequence from clone RP11-155O18 on chromosome 1 Contains the 3' end of the MADHIP gene for MAD (mothers against decapentaplegic homolog (Drosophila) interacting protein, receptor activation anchor), gene KIAA1836, a phospholipase A2 group XII (PLA2G12) pseudogene, the ORC1L gene for origin recognition complex subunit 1-like (yeast) and the 5' end of gene FLJ34719, complete sequence Length = 107627 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 85679 aggcatttgagaccaacctgg 85659
>gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, complete sequence Length = 158595 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 27078 aggcatttgagaccaacctgg 27098
>emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chromosome 6, complete sequence Length = 120745 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 789 acagcaagtggtttctcagtc 809 ||||||||||||||||||||| Sbjct: 99787 acagcaagtggtttctcagtc 99767
>gb|AC099018.1| Drosophila melanogaster, chromosome 2R, region 60A-60B, BAC clone BACR28M05, complete sequence Length = 154840 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 ttgagaatgagttcaagaagt 1204 ||||||||||||||||||||| Sbjct: 65990 ttgagaatgagttcaagaagt 66010
>gb|AY058717.1| Drosophila melanogaster LD45730 full length cDNA Length = 1451 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 ttgagaatgagttcaagaagt 1204 ||||||||||||||||||||| Sbjct: 742 ttgagaatgagttcaagaagt 762
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 atggcttcggcggcggcggcg 246 ||||||||||||||||||||| Sbjct: 67914 atggcttcggcggcggcggcg 67934
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 708 agaaagtcaaacaatgcaagctgtt 732 |||||||||||||||| |||||||| Sbjct: 573674 agaaagtcaaacaatggaagctgtt 573698
>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15 Length = 123209 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 actttgtgctcaatgattatt 595 ||||||||||||||||||||| Sbjct: 69454 actttgtgctcaatgattatt 69474
>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone BACR08P09, complete sequence Length = 181463 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ttcggcggcggcggcgactca 251 ||||||||||||||||||||| Sbjct: 73701 ttcggcggcggcggcgactca 73721
>gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365F18, complete sequence Length = 184520 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 177747 aggcatttgagaccaacctgg 177767
>gb|AC108070.2| Homo sapiens BAC clone RP11-638P8 from 2, complete sequence Length = 92113 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gggagatgaatctcttcaagaggaa 843 ||||||||| ||||||||||||||| Sbjct: 38235 gggagatgagtctcttcaagaggaa 38211
>gb|AC084018.28| Homo sapiens 12 BAC RP11-347I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175754 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 25957 aggcatttgagaccaacctgg 25977
>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete sequence Length = 203909 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1547 aaggaggaagcataagaggttttga 1571 |||||||||||||| |||||||||| Sbjct: 154842 aaggaggaagcataggaggttttga 154818
>gb|AC010969.11| Homo sapiens BAC clone RP11-95D17 from 2, complete sequence Length = 190748 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 92019 aggcatttgagaccaacctgg 91999
>gb|AC064852.4| Homo sapiens BAC clone RP11-174L18 from 2, complete sequence Length = 152781 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 87772 aggcatttgagaccaacctgg 87792
>gb|AC004241.2| Homo sapiens 12 PAC RP3-197B17 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 136877 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 101965 aggcatttgagaccaacctgg 101945
>ref|NM_194248.1| Homo sapiens otoferlin (OTOF), transcript variant 1, mRNA gb|AF183185.1|AF183185 Homo sapiens brain otoferlin long isoform (OTOF) mRNA, complete cds Length = 7172 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gggagatgaatctcttcaagaggaa 843 ||||||||| ||||||||||||||| Sbjct: 529 gggagatgagtctcttcaagaggaa 553
>dbj|AK069472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019C12, full insert sequence Length = 1714 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 ctccccatggcttcggcggcggcggcgac 248 ||||||||||| |||||||||||||||| Sbjct: 54 ctccccatggcggcggcggcggcggcgac 26
>ref|XM_445939.1| Candida glabrata CBS138, CAGL0E05764g partial mRNA Length = 1650 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 708 agaaagtcaaacaatgcaagctgtt 732 |||||||||||||||| |||||||| Sbjct: 848 agaaagtcaaacaatggaagctgtt 872
>dbj|AP000657.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-662K22, complete sequence Length = 51621 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 986 cacctctgttccatgtggctc 1006 ||||||||||||||||||||| Sbjct: 38766 cacctctgttccatgtggctc 38786
>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105 Length = 340000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 986 cacctctgttccatgtggctc 1006 ||||||||||||||||||||| Sbjct: 83138 cacctctgttccatgtggctc 83158
>gb|AY103759.1| Zea mays PCO124661 mRNA sequence Length = 1440 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gcttcggcggcggcggcgact 249 ||||||||||||||||||||| Sbjct: 35 gcttcggcggcggcggcgact 55
>gb|AY105078.1| Zea mays PCO124558 mRNA sequence Length = 761 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cccatggcttcggcggcggcg 243 ||||||||||||||||||||| Sbjct: 117 cccatggcttcggcggcggcg 137
>gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, region 59C1-59C5, P1 clones DS06621 and DS02186, complete sequence Length = 101320 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 ttcggcggcggcggcgactca 251 ||||||||||||||||||||| Sbjct: 4900 ttcggcggcggcggcgactca 4880
>dbj|AP005273.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-754H12, complete sequence Length = 51915 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 ggcatttgagaccaacctggc 668 ||||||||||||||||||||| Sbjct: 3039 ggcatttgagaccaacctggc 3019
>gb|AC005318.1|AC005318 Homo sapiens Chromosome 15q26.1 PAC clone pDJ105i19, complete sequence Length = 87925 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 23173 aggcatttgagaccaacctgg 23153
>gb|AY610156.1| Sus scrofa clone Clu_8130.scr.msk.p1.Contig1, mRNA sequence Length = 1235 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1118 atgatgaagaagagagcaaat 1138 ||||||||||||||||||||| Sbjct: 265 atgatgaagaagagagcaaat 285
>gb|AC003104.1|AC003104 Homo sapiens chromosome 17, clone HCIT48C15, complete sequence Length = 100635 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 aggcatttgagaccaacctgg 667 ||||||||||||||||||||| Sbjct: 52806 aggcatttgagaccaacctgg 52826
>gb|AC004642.1|AC004642 Drosophila melanogaster DNA sequence (P1s DS00543 (D193) and DS02867 (D200)), complete sequence Length = 148432 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1184 ttgagaatgagttcaagaagt 1204 ||||||||||||||||||||| Sbjct: 117232 ttgagaatgagttcaagaagt 117212
>gb|U73640.1|HSU73640 Human chromosome 11 187a8 cosmid, complete sequence Length = 36092 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 ggcatttgagaccaacctggc 668 ||||||||||||||||||||| Sbjct: 24081 ggcatttgagaccaacctggc 24061 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 309,661,894 Number of extensions: 17726398 Number of successful extensions: 500592 Number of sequences better than 10.0: 107 Number of HSP's gapped: 500587 Number of HSP's successfully gapped: 142 Length of query: 1793 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1770 Effective length of database: 18,503,978,556 Effective search space: 32752042044120 Effective search space used: 32752042044120 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)