| Clone Name | FLbaf68k04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT835507.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012J03, full insert sequence Length = 430 Score = 192 bits (97), Expect = 8e-46 Identities = 154/173 (89%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgaga 104 ||||||||||||| || || ||||||||||||||||| || ||||||||||||||||||| Sbjct: 85 cgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgcggagctgaga 144 Query: 105 acacgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctaca 164 |||| || ||| |||| ||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 145 acacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatcctctaca 204 Query: 165 agaagcgcacccgcaggattgttcaatacgaagctcgctgaagacaaaggaac 217 ||||||| |||||| ||||||||||||| ||||| ||||||||| || ||||| Sbjct: 205 agaagcgtacccgccggattgttcaatatgaagcacgctgaagataagggaac 257
>dbj|AK241903.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075030G13, full insert sequence Length = 428 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgaga 104 ||||||||||||| || || ||||||||||||||||| || ||||||||||||||||||| Sbjct: 136 cgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgcggagctgaga 195 Query: 105 acacgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctaca 164 |||| || ||| |||| ||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 196 acacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatcctctaca 255 Query: 165 agaagcgcacccgcaggattgttcaatacgaagctcgctgaaga 208 ||||||| |||||| ||||||||||||| ||||| ||||||||| Sbjct: 256 agaagcgtacccgccggattgttcaatatgaagcacgctgaaga 299
>gb|AY104348.1| Zea mays PCO101214 mRNA sequence Length = 570 Score = 178 bits (90), Expect = 1e-41 Identities = 144/162 (88%) Strand = Plus / Plus Query: 47 atggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgagaac 106 ||||||||||||||||||||||| ||||| || || |||||||||||||||||||||||| Sbjct: 146 atggatccgcagcagccggagcctgtcagttacctctgcggagattgcggagctgagaac 205 Query: 107 acgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaag 166 || || ||| | || ||||| ||||||||||| || ||||| |||||||||||||||||| Sbjct: 206 accctgaagcccggagatgtcatccagtgccgtgaatgtggctaccgcatcctctacaag 265 Query: 167 aagcgcacccgcaggattgttcaatacgaagctcgctgaaga 208 ||||| |||||| ||||||| ||||| ||||| ||||||||| Sbjct: 266 aagcggacccgccggattgtccaatatgaagcgcgctgaaga 307
>emb|CT836412.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122C04, full insert sequence Length = 1136 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgaga 104 ||||||||||||| || || ||||||||||||||||| || |||||||| |||||||||| Sbjct: 62 cgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgtggagctgaga 121 Query: 105 acacgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctaca 164 |||| || ||| |||| ||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 122 acacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatcctctaca 181 Query: 165 agaagcgcacccgc 178 |||||||||||||| Sbjct: 182 agaagcgcacccgc 195
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 88 agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147 |||||| |||||||||||||| || ||| |||| ||||||||||||||||| || ||||| Sbjct: 122151 agattgtggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 122210 Query: 148 gtaccgcatcctctacaagaagcgcacccgc 178 || ||||||||||||||||||||||||||| Sbjct: 122211 ctatcgcatcctctacaagaagcgcacccgc 122241 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatct 81 ||||||||||||| || || ||||||||||||||||| Sbjct: 121867 cgatggatccgcaacaacctgagcccgtcagctatct 121903
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 88 agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147 |||||| |||||||||||||| || ||| |||| ||||||||||||||||| || ||||| Sbjct: 21556 agattgtggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 21615 Query: 148 gtaccgcatcctctacaagaagcgcacccgc 178 || ||||||||||||||||||||||||||| Sbjct: 21616 ctatcgcatcctctacaagaagcgcacccgc 21646 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatct 81 ||||||||||||| || || ||||||||||||||||| Sbjct: 21272 cgatggatccgcaacaacctgagcccgtcagctatct 21308
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 88 agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147 |||||| |||||||||||||| || ||| |||| ||||||||||||||||| || ||||| Sbjct: 2927540 agattgtggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 2927599 Query: 148 gtaccgcatcctctacaagaagcgcacccgc 178 || ||||||||||||||||||||||||||| Sbjct: 2927600 ctatcgcatcctctacaagaagcgcacccgc 2927630 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatct 81 ||||||||||||| || || ||||||||||||||||| Sbjct: 2927256 cgatggatccgcaacaacctgagcccgtcagctatct 2927292
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 88 agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147 ||||||||||||||||||||| || ||| |||| ||||||||||||||||| || ||||| Sbjct: 19082569 agattgcggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 19082628 Query: 148 gtaccgcatcctctacaagaagcgcacccgc 178 || |||||||||||||||||||| |||||| Sbjct: 19082629 ctatcgcatcctctacaagaagcgtacccgc 19082659 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatct 81 ||||||||||||| || || ||||||||||||||||| Sbjct: 19082100 cgatggatccgcaacaacctgagcccgtcagctatct 19082136
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 88 agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147 ||||||||||||||||||||| || ||| |||| ||||||||||||||||| || ||||| Sbjct: 47986 agattgcggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 48045 Query: 148 gtaccgcatcctctacaagaagcgcacccgc 178 || |||||||||||||||||||| |||||| Sbjct: 48046 ctatcgcatcctctacaagaagcgtacccgc 48076 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 45 cgatggatccgcagcagccggagcccgtcagctatct 81 ||||||||||||| || || ||||||||||||||||| Sbjct: 47517 cgatggatccgcaacaacctgagcccgtcagctatct 47553
>ref|NM_123466.2| Arabidopsis thaliana DNA binding / DNA-directed RNA polymerase (AT5G41010) mRNA, complete cds Length = 187 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 70 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 129 Query: 179 aggattgttcaatacgaagctcgctga 205 || ||||||||||||||||||||||| Sbjct: 130 agagttgttcaatacgaagctcgctga 156
>gb|AY079307.1| Arabidopsis thaliana unknown protein (At5g41010) mRNA, complete cds Length = 187 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 70 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 129 Query: 179 aggattgttcaatacgaagctcgctga 205 || ||||||||||||||||||||||| Sbjct: 130 agagttgttcaatacgaagctcgctga 156
>gb|AY045954.1| Arabidopsis thaliana unknown protein (At5g41010) mRNA, complete cds Length = 473 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 160 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 219 Query: 179 aggattgttcaatacgaagctcgctga 205 || ||||||||||||||||||||||| Sbjct: 220 agagttgttcaatacgaagctcgctga 246
>gb|AY084743.1| Arabidopsis thaliana clone 1165 mRNA, complete sequence Length = 481 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 187 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 246 Query: 179 aggattgttcaatacgaagctcgctga 205 || ||||||||||||||||||||||| Sbjct: 247 agagttgttcaatacgaagctcgctga 273
>emb|BX832860.1|CNS0A0AI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZB05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 475 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 156 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 215 Query: 179 aggattgttcaatacgaagctcgctga 205 || ||||||||||||||||||||||| Sbjct: 216 agagttgttcaatacgaagctcgctga 242
>emb|BX833112.1|CNS09Z88 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 452 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 156 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 215 Query: 179 aggattgttcaatacgaagctcgctga 205 || ||||||||||||| ||||||||| Sbjct: 216 agagttgttcaatacgaggctcgctga 242
>dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MEE6 Length = 83698 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccg 177 |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| Sbjct: 14289 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccg 14347 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 ttgttcaatacgaagctcgctga 205 ||||||||||||||||||||||| Sbjct: 14686 ttgttcaatacgaagctcgctga 14708
>emb|AJ697755.1| Eucalyptus globulus subsp. globulus partial mRNA for putative RNA polymerase II Length = 117 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 150 accgcatcctctacaagaagcgcacccgc 178 ||||||||||||||||||||||||||||| Sbjct: 1 accgcatcctctacaagaagcgcacccgc 29
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 47 atggatccgcagcagccggagcccgtcagctatctatgc 85 |||||||| ||||||||| | |||||||||||||||||| Sbjct: 293462 atggatcctcagcagccgaaacccgtcagctatctatgc 293424
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 47 atggatccgcagcagccggagcccgtcagctatctatgc 85 |||||||| ||||||||| | |||||||||||||||||| Sbjct: 128326 atggatcctcagcagccgaaacccgtcagctatctatgc 128288
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 47 atggatccgcagcagccggagcccgtcagctatctatgc 85 |||||||| ||||||||| | |||||||||||||||||| Sbjct: 17700 atggatcctcagcagccgaaacccgtcagctatctatgc 17662
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 47 atggatccgcagcagccggagcccgtcagctatctatgc 85 |||||||| ||||||||| | |||||||||||||||||| Sbjct: 45461 atggatcctcagcagccgaaacccgtcagctatctatgc 45423
>gb|AY693426.1| Drosophila pseudoobscura isolate BP_092_093_C proximal Arrowhead inversion breakpoint region Length = 5252 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 134 tgccgcgagtgtgggtaccgcatcctctacaagaagcgcacc 175 ||||||||||| || ||||||||| | ||||||||||||||| Sbjct: 1860 tgccgcgagtgcggctaccgcatcatgtacaagaagcgcacc 1819
>ref|XM_317833.2| Anopheles gambiae str. PEST ENSANGP00000014480 (ENSANGG00000011991), mRNA Length = 371 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 134 tgccgcgagtgtgggtaccgcatcctctacaagaagcg 171 |||||||||||||| ||||| ||| | ||||||||||| Sbjct: 170 tgccgcgagtgtggttaccgtatcatgtacaagaagcg 207
>ref|XM_001011678.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00594180) mRNA, complete cds Length = 1716 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 aaaattgttattattgctatt 449 ||||||||||||||||||||| Sbjct: 172 aaaattgttattattgctatt 152
>gb|AC190159.3| Pan troglodytes BAC clone CH251-675J15 from chromosome 7, complete sequence Length = 202600 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 tacagtgcttgtaggttgtatttgt 328 |||||||||||||| |||||||||| Sbjct: 122496 tacagtgcttgtagtttgtatttgt 122472
>ref|XM_869410.1| PREDICTED: Bos taurus similar to Potential phospholipid-transporting ATPase IB (ATPase class I type 8A member 2) (ML-1) (LOC617199), mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 ttcatgtctggagcgatggga 257 ||||||||||||||||||||| Sbjct: 692 ttcatgtctggagcgatggga 672
>gb|AC004016.1| Homo sapiens BAC clone CTA-424N5 from 7, complete sequence Length = 111942 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 tacagtgcttgtaggttgtatttgt 328 |||||||||||||| |||||||||| Sbjct: 106879 tacagtgcttgtagtttgtatttgt 106855
>dbj|AB179766.1| Alternaria alternata AF-toxin biosynthesis gene cluster (Aft9-1, Aft10-1, Aft11-1, Aft12-1, AftR-2, Aft3-2), complete cds Length = 37168 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 cctcgatggatccgcagcagc 62 ||||||||||||||||||||| Sbjct: 21479 cctcgatggatccgcagcagc 21459
>gb|AC154721.3| Mus musculus BAC clone RP24-371H8 from chromosome 17, complete sequence Length = 128301 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 gctattgcaggcaataaaatg 464 ||||||||||||||||||||| Sbjct: 116023 gctattgcaggcaataaaatg 116003
>emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 in linkage group 9, complete sequence Length = 180734 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 aaaaattgttattattgctat 448 ||||||||||||||||||||| Sbjct: 63775 aaaaattgttattattgctat 63755
>ref|XM_001019838.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00138560) mRNA, complete cds Length = 8511 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 1381 attgttattattgctattgc 1362
>ref|XM_001014415.1| Tetrahymena thermophila SB210 cation channel family protein (TTHERM_00522370) mRNA, complete cds Length = 9876 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 9009 attgttattattgctattgc 8990
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 6594548 attgttattattgctattgc 6594567
>gb|AC188106.1| Pongo pygmaeus abelii chromosome UNK clone CH276-57H12, complete sequence Length = 198879 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 agaaatgtattatatattac 306 |||||||||||||||||||| Sbjct: 148888 agaaatgtattatatattac 148869
>ref|XM_636429.1| Dictyostelium discoideum hypothetical protein (DDB0218196), partial mRNA Length = 3920 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 2633 attgttattattgctattgc 2614
>gb|U41557.1| Caenorhabditis elegans cosmid C50F7, complete sequence Length = 31414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ctggatatcgaaaaattgtt 437 |||||||||||||||||||| Sbjct: 19262 ctggatatcgaaaaattgtt 19281
>gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, complete sequence Length = 209731 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ttgttattattgctattgca 452 |||||||||||||||||||| Sbjct: 155400 ttgttattattgctattgca 155419
>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence Length = 213684 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 agacaaaggaacaagcatca 225 |||||||||||||||||||| Sbjct: 164289 agacaaaggaacaagcatca 164308
>gb|AY319931.1| Pristionchus pacificus BAC PPBAC-7E22 sequence Length = 126255 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aaagctacaatggagaaatg 293 |||||||||||||||||||| Sbjct: 100850 aaagctacaatggagaaatg 100831
>dbj|AK157449.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830216N24 product:unclassifiable, full insert sequence Length = 7801 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 agacaaaggaacaagcatca 225 |||||||||||||||||||| Sbjct: 6043 agacaaaggaacaagcatca 6062
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 14870 attgttattattgctattgc 14889
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 118974 attgttattattgctattgc 118993
>emb|AL157407.11| Human DNA sequence from clone RP4-609E1 on chromosome 1p31.2-32.1 Contains the ARHI gene for ras homolog gene family member I, part of a novel gene (FLJ38762), ADP-ribosylation factor-like 5 (ARL5) pseudogene and the 3' end of a putative NFkB activating protein 373, complete sequence Length = 142396 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gcaataaaatgacctgttgg 473 |||||||||||||||||||| Sbjct: 10780 gcaataaaatgacctgttgg 10761
>emb|AL121914.31|HSJ1167H4 Human DNA sequence from clone RP5-1167H4 on chromosome 20 Contains the C20orf108 gene, the STK6 gene for serine/threonine kinase 6, the CSTF1 gene for cleavage stimulation factor 3' pre-RNA subunit 1 (50 kDa), the C20orf32 gene for a novel SH3 domain-containing protein (HEF like protein, HEFL), the RPL39P gene for ribosomal protein L39 pseudogene and two CpG islands, complete sequence Length = 135693 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tattatatattacagtgctt 313 |||||||||||||||||||| Sbjct: 130156 tattatatattacagtgctt 130175
>gb|AC007254.3| Homo sapiens BAC clone RP11-509C20 from 2, complete sequence Length = 136417 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ttgttattattgctattgca 452 |||||||||||||||||||| Sbjct: 30990 ttgttattattgctattgca 31009
>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete sequence Length = 207534 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 agacaaaggaacaagcatca 225 |||||||||||||||||||| Sbjct: 72500 agacaaaggaacaagcatca 72519
>emb|AJ639922.1| Uncultured bacterium partial pks7 gene for polyketide synthase I Length = 2487 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ctcgatggatccgcagcagc 62 |||||||||||||||||||| Sbjct: 249 ctcgatggatccgcagcagc 268
>gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, complete sequence Length = 90243 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gatatcgaaaaattgttatt 440 |||||||||||||||||||| Sbjct: 19843 gatatcgaaaaattgttatt 19862
>gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, complete sequence Length = 110999 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 agaaatgtattatatattac 306 |||||||||||||||||||| Sbjct: 23831 agaaatgtattatatattac 23812
>gb|AC006212.1|AC006212 Homo sapiens, clone hRPK.14_A_1, complete sequence Length = 157772 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 attgttattattgctattgc 451 |||||||||||||||||||| Sbjct: 82930 attgttattattgctattgc 82949
>gb|AC131687.4| Mus musculus BAC clone RP23-379C1 from 14, complete sequence Length = 176044 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tgagatttcagacatcaggt 393 |||||||||||||||||||| Sbjct: 146351 tgagatttcagacatcaggt 146332 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 82,382,366 Number of extensions: 4239902 Number of successful extensions: 316482 Number of sequences better than 10.0: 51 Number of HSP's gapped: 316482 Number of HSP's successfully gapped: 57 Length of query: 499 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 477 Effective length of database: 18,508,616,841 Effective search space: 8828610233157 Effective search space used: 8828610233157 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)