ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68k04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT835507.1| Oryza sativa (indica cultivar-group) cDNA clone:... 192 8e-46
2dbj|AK241903.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 190 3e-45
3gb|AY104348.1| Zea mays PCO101214 mRNA sequence 178 1e-41
4emb|CT836412.1| Oryza sativa (indica cultivar-group) cDNA clone:... 155 2e-34
5gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 109 9e-21
6gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome... 109 9e-21
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
9dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
10ref|NM_123466.2| Arabidopsis thaliana DNA binding / DNA-directed... 101 2e-18
11gb|AY079307.1| Arabidopsis thaliana unknown protein (At5g41010) ... 101 2e-18
12gb|AY045954.1| Arabidopsis thaliana unknown protein (At5g41010) ... 101 2e-18
13gb|AY084743.1| Arabidopsis thaliana clone 1165 mRNA, complete se... 101 2e-18
14emb|BX832860.1|CNS0A0AI Arabidopsis thaliana Full-length cDNA Co... 101 2e-18
15emb|BX833112.1|CNS09Z88 Arabidopsis thaliana Full-length cDNA Co... 94 6e-16
16dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 70 8e-09
17emb|AJ697755.1| Eucalyptus globulus subsp. globulus partial mRNA... 58 3e-05
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
19dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
20dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
21dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
22gb|AY693426.1| Drosophila pseudoobscura isolate BP_092_093_C pro... 52 0.002
23ref|XM_317833.2| Anopheles gambiae str. PEST ENSANGP00000014480 ... 44 0.47
24ref|XM_001011678.1| Tetrahymena thermophila SB210 hypothetical p... 42 1.8
25gb|AC190159.3| Pan troglodytes BAC clone CH251-675J15 from chrom... 42 1.8
26ref|XM_869410.1| PREDICTED: Bos taurus similar to Potential phos... 42 1.8
27gb|AC004016.1| Homo sapiens BAC clone CTA-424N5 from 7, complete... 42 1.8
28dbj|AB179766.1| Alternaria alternata AF-toxin biosynthesis gene ... 42 1.8
29gb|AC154721.3| Mus musculus BAC clone RP24-371H8 from chromosome... 42 1.8
30emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 i... 42 1.8
31ref|XM_001019838.1| Tetrahymena thermophila SB210 hypothetical p... 40 7.3
32ref|XM_001014415.1| Tetrahymena thermophila SB210 cation channel... 40 7.3
33gb|AE014298.4| Drosophila melanogaster chromosome X, complete se... 40 7.3
34gb|AC188106.1| Pongo pygmaeus abelii chromosome UNK clone CH276-... 40 7.3
35ref|XM_636429.1| Dictyostelium discoideum hypothetical protein (... 40 7.3
36gb|U41557.1| Caenorhabditis elegans cosmid C50F7, complete sequence 40 7.3
37gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, comp... 40 7.3
38gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosom... 40 7.3
39gb|AY319931.1| Pristionchus pacificus BAC PPBAC-7E22 sequence 40 7.3
40dbj|AK157449.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.3
41gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell... 40 7.3
42gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell... 40 7.3
43emb|AL157407.11| Human DNA sequence from clone RP4-609E1 on chro... 40 7.3
44emb|AL121914.31|HSJ1167H4 Human DNA sequence from clone RP5-1167... 40 7.3
45gb|AC007254.3| Homo sapiens BAC clone RP11-509C20 from 2, comple... 40 7.3
46gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosom... 40 7.3
47emb|AJ639922.1| Uncultured bacterium partial pks7 gene for polyk... 40 7.3
48gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, ... 40 7.3
49gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, comp... 40 7.3
50gb|AC006212.1|AC006212 Homo sapiens, clone hRPK.14_A_1, complete... 40 7.3
51gb|AC131687.4| Mus musculus BAC clone RP23-379C1 from 14, comple... 40 7.3

>emb|CT835507.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012J03, full
           insert sequence
          Length = 430
 Score =  192 bits (97), Expect = 8e-46
 Identities = 154/173 (89%)
 Strand = Plus / Plus

                                                                       
Query: 45  cgatggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgaga 104
           ||||||||||||| || || ||||||||||||||||| || |||||||||||||||||||
Sbjct: 85  cgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgcggagctgaga 144

                                                                       
Query: 105 acacgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctaca 164
           |||| || ||| |||| ||||||||||||||||| || ||||| || |||||||||||||
Sbjct: 145 acacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatcctctaca 204

                                                                
Query: 165 agaagcgcacccgcaggattgttcaatacgaagctcgctgaagacaaaggaac 217
           ||||||| |||||| ||||||||||||| ||||| ||||||||| || |||||
Sbjct: 205 agaagcgtacccgccggattgttcaatatgaagcacgctgaagataagggaac 257



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>dbj|AK241903.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075030G13,
           full insert sequence
          Length = 428

 Score =  190 bits (96), Expect = 3e-45
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                       
Query: 45  cgatggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgaga 104
           ||||||||||||| || || ||||||||||||||||| || |||||||||||||||||||
Sbjct: 136 cgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgcggagctgaga 195

                                                                       
Query: 105 acacgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctaca 164
           |||| || ||| |||| ||||||||||||||||| || ||||| || |||||||||||||
Sbjct: 196 acacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatcctctaca 255

                                                       
Query: 165 agaagcgcacccgcaggattgttcaatacgaagctcgctgaaga 208
           ||||||| |||||| ||||||||||||| ||||| |||||||||
Sbjct: 256 agaagcgtacccgccggattgttcaatatgaagcacgctgaaga 299



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>gb|AY104348.1| Zea mays PCO101214 mRNA sequence
          Length = 570

 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Plus

                                                                       
Query: 47  atggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgagaac 106
           ||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 146 atggatccgcagcagccggagcctgtcagttacctctgcggagattgcggagctgagaac 205

                                                                       
Query: 107 acgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaag 166
           || || ||| | || ||||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 206 accctgaagcccggagatgtcatccagtgccgtgaatgtggctaccgcatcctctacaag 265

                                                     
Query: 167 aagcgcacccgcaggattgttcaatacgaagctcgctgaaga 208
           ||||| |||||| ||||||| ||||| ||||| |||||||||
Sbjct: 266 aagcggacccgccggattgtccaatatgaagcgcgctgaaga 307



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>emb|CT836412.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122C04, full
           insert sequence
          Length = 1136

 Score =  155 bits (78), Expect = 2e-34
 Identities = 120/134 (89%)
 Strand = Plus / Plus

                                                                       
Query: 45  cgatggatccgcagcagccggagcccgtcagctatctatgcggagattgcggagctgaga 104
           ||||||||||||| || || ||||||||||||||||| || |||||||| ||||||||||
Sbjct: 62  cgatggatccgcaacaacctgagcccgtcagctatctctgtggagattgtggagctgaga 121

                                                                       
Query: 105 acacgctcaagacaggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctaca 164
           |||| || ||| |||| ||||||||||||||||| || ||||| || |||||||||||||
Sbjct: 122 acacactgaagccaggagatgtgatccagtgccgtgaatgtggctatcgcatcctctaca 181

                         
Query: 165 agaagcgcacccgc 178
           ||||||||||||||
Sbjct: 182 agaagcgcacccgc 195



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>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
              complete sequence
          Length = 164898

 Score =  109 bits (55), Expect = 9e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                          
Query: 88     agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147
              |||||| |||||||||||||| || ||| |||| ||||||||||||||||| || |||||
Sbjct: 122151 agattgtggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 122210

                                             
Query: 148    gtaccgcatcctctacaagaagcgcacccgc 178
               || |||||||||||||||||||||||||||
Sbjct: 122211 ctatcgcatcctctacaagaagcgcacccgc 122241



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 45     cgatggatccgcagcagccggagcccgtcagctatct 81
              ||||||||||||| || || |||||||||||||||||
Sbjct: 121867 cgatggatccgcaacaacctgagcccgtcagctatct 121903



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>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0072C16, complete sequence
          Length = 159525

 Score =  109 bits (55), Expect = 9e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 88    agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147
             |||||| |||||||||||||| || ||| |||| ||||||||||||||||| || |||||
Sbjct: 21556 agattgtggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 21615

                                            
Query: 148   gtaccgcatcctctacaagaagcgcacccgc 178
              || |||||||||||||||||||||||||||
Sbjct: 21616 ctatcgcatcctctacaagaagcgcacccgc 21646



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 45    cgatggatccgcagcagccggagcccgtcagctatct 81
             ||||||||||||| || || |||||||||||||||||
Sbjct: 21272 cgatggatccgcaacaacctgagcccgtcagctatct 21308



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  109 bits (55), Expect = 9e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                           
Query: 88      agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147
               |||||| |||||||||||||| || ||| |||| ||||||||||||||||| || |||||
Sbjct: 2927540 agattgtggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 2927599

                                              
Query: 148     gtaccgcatcctctacaagaagcgcacccgc 178
                || |||||||||||||||||||||||||||
Sbjct: 2927600 ctatcgcatcctctacaagaagcgcacccgc 2927630



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 45      cgatggatccgcagcagccggagcccgtcagctatct 81
               ||||||||||||| || || |||||||||||||||||
Sbjct: 2927256 cgatggatccgcaacaacctgagcccgtcagctatct 2927292



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  109 bits (55), Expect = 9e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                            
Query: 88       agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147
                ||||||||||||||||||||| || ||| |||| ||||||||||||||||| || |||||
Sbjct: 19082569 agattgcggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 19082628

                                               
Query: 148      gtaccgcatcctctacaagaagcgcacccgc 178
                 || |||||||||||||||||||| ||||||
Sbjct: 19082629 ctatcgcatcctctacaagaagcgtacccgc 19082659



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 45       cgatggatccgcagcagccggagcccgtcagctatct 81
                ||||||||||||| || || |||||||||||||||||
Sbjct: 19082100 cgatggatccgcaacaacctgagcccgtcagctatct 19082136



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>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0702H08
          Length = 166899

 Score =  109 bits (55), Expect = 9e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 88    agattgcggagctgagaacacgctcaagacaggggatgtgatccagtgccgcgagtgtgg 147
             ||||||||||||||||||||| || ||| |||| ||||||||||||||||| || |||||
Sbjct: 47986 agattgcggagctgagaacacactgaagccaggagatgtgatccagtgccgtgaatgtgg 48045

                                            
Query: 148   gtaccgcatcctctacaagaagcgcacccgc 178
              || |||||||||||||||||||| ||||||
Sbjct: 48046 ctatcgcatcctctacaagaagcgtacccgc 48076



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 45    cgatggatccgcagcagccggagcccgtcagctatct 81
             ||||||||||||| || || |||||||||||||||||
Sbjct: 47517 cgatggatccgcaacaacctgagcccgtcagctatct 47553



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>ref|NM_123466.2| Arabidopsis thaliana DNA binding / DNA-directed RNA polymerase
           (AT5G41010) mRNA, complete cds
          Length = 187

 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178
           |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| 
Sbjct: 70  ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 129

                                      
Query: 179 aggattgttcaatacgaagctcgctga 205
           ||  |||||||||||||||||||||||
Sbjct: 130 agagttgttcaatacgaagctcgctga 156



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>gb|AY079307.1| Arabidopsis thaliana unknown protein (At5g41010) mRNA, complete cds
          Length = 187

 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178
           |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| 
Sbjct: 70  ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 129

                                      
Query: 179 aggattgttcaatacgaagctcgctga 205
           ||  |||||||||||||||||||||||
Sbjct: 130 agagttgttcaatacgaagctcgctga 156



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>gb|AY045954.1| Arabidopsis thaliana unknown protein (At5g41010) mRNA, complete cds
          Length = 473

 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178
           |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| 
Sbjct: 160 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 219

                                      
Query: 179 aggattgttcaatacgaagctcgctga 205
           ||  |||||||||||||||||||||||
Sbjct: 220 agagttgttcaatacgaagctcgctga 246



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>gb|AY084743.1| Arabidopsis thaliana clone 1165 mRNA, complete sequence
          Length = 481

 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178
           |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| 
Sbjct: 187 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 246

                                      
Query: 179 aggattgttcaatacgaagctcgctga 205
           ||  |||||||||||||||||||||||
Sbjct: 247 agagttgttcaatacgaagctcgctga 273



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>emb|BX832860.1|CNS0A0AI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL18ZB05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 475

 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178
           |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| 
Sbjct: 156 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 215

                                      
Query: 179 aggattgttcaatacgaagctcgctga 205
           ||  |||||||||||||||||||||||
Sbjct: 216 agagttgttcaatacgaagctcgctga 242



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>emb|BX833112.1|CNS09Z88 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZF11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 452

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccgc 178
           |||||||||||||| ||| | |||||||||||||| || |||||||||||||| ||||| 
Sbjct: 156 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccgt 215

                                      
Query: 179 aggattgttcaatacgaagctcgctga 205
           ||  ||||||||||||| |||||||||
Sbjct: 216 agagttgttcaatacgaggctcgctga 242



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>dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MEE6
          Length = 83698

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 119   ggggatgtgatccagtgccgcgagtgtgggtaccgcatcctctacaagaagcgcacccg 177
             |||||||||||||| ||| | |||||||||||||| || |||||||||||||| |||||
Sbjct: 14289 ggggatgtgatccaatgcagagagtgtgggtaccgtattctctacaagaagcgtacccg 14347



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 183   ttgttcaatacgaagctcgctga 205
             |||||||||||||||||||||||
Sbjct: 14686 ttgttcaatacgaagctcgctga 14708



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>emb|AJ697755.1| Eucalyptus globulus subsp. globulus partial mRNA for putative RNA
           polymerase II
          Length = 117

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 150 accgcatcctctacaagaagcgcacccgc 178
           |||||||||||||||||||||||||||||
Sbjct: 1   accgcatcctctacaagaagcgcacccgc 29



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 47     atggatccgcagcagccggagcccgtcagctatctatgc 85
              |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 293462 atggatcctcagcagccgaaacccgtcagctatctatgc 293424



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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446F04
          Length = 175390

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 47     atggatccgcagcagccggagcccgtcagctatctatgc 85
              |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 128326 atggatcctcagcagccgaaacccgtcagctatctatgc 128288



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>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1317D11
          Length = 135043

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 47    atggatccgcagcagccggagcccgtcagctatctatgc 85
             |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 17700 atggatcctcagcagccgaaacccgtcagctatctatgc 17662



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>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0617C02
          Length = 135605

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 47    atggatccgcagcagccggagcccgtcagctatctatgc 85
             |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 45461 atggatcctcagcagccgaaacccgtcagctatctatgc 45423



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>gb|AY693426.1| Drosophila pseudoobscura isolate BP_092_093_C proximal Arrowhead
            inversion breakpoint region
          Length = 5252

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 134  tgccgcgagtgtgggtaccgcatcctctacaagaagcgcacc 175
            ||||||||||| || ||||||||| | |||||||||||||||
Sbjct: 1860 tgccgcgagtgcggctaccgcatcatgtacaagaagcgcacc 1819



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>ref|XM_317833.2| Anopheles gambiae str. PEST ENSANGP00000014480
           (ENSANGG00000011991), mRNA
          Length = 371

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 134 tgccgcgagtgtgggtaccgcatcctctacaagaagcg 171
           |||||||||||||| ||||| ||| | |||||||||||
Sbjct: 170 tgccgcgagtgtggttaccgtatcatgtacaagaagcg 207



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>ref|XM_001011678.1| Tetrahymena thermophila SB210 hypothetical protein
           (TTHERM_00594180) mRNA, complete cds
          Length = 1716

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 aaaattgttattattgctatt 449
           |||||||||||||||||||||
Sbjct: 172 aaaattgttattattgctatt 152



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>gb|AC190159.3| Pan troglodytes BAC clone CH251-675J15 from chromosome 7, complete
              sequence
          Length = 202600

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 304    tacagtgcttgtaggttgtatttgt 328
              |||||||||||||| ||||||||||
Sbjct: 122496 tacagtgcttgtagtttgtatttgt 122472



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>ref|XM_869410.1| PREDICTED: Bos taurus similar to Potential
           phospholipid-transporting ATPase IB (ATPase class I type
           8A member 2) (ML-1) (LOC617199), mRNA
          Length = 891

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 ttcatgtctggagcgatggga 257
           |||||||||||||||||||||
Sbjct: 692 ttcatgtctggagcgatggga 672



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>gb|AC004016.1| Homo sapiens BAC clone CTA-424N5 from 7, complete sequence
          Length = 111942

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 304    tacagtgcttgtaggttgtatttgt 328
              |||||||||||||| ||||||||||
Sbjct: 106879 tacagtgcttgtagtttgtatttgt 106855



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>dbj|AB179766.1| Alternaria alternata AF-toxin biosynthesis gene cluster (Aft9-1,
             Aft10-1, Aft11-1, Aft12-1, AftR-2, Aft3-2), complete cds
          Length = 37168

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    cctcgatggatccgcagcagc 62
             |||||||||||||||||||||
Sbjct: 21479 cctcgatggatccgcagcagc 21459



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>gb|AC154721.3| Mus musculus BAC clone RP24-371H8 from chromosome 17, complete sequence
          Length = 128301

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 444    gctattgcaggcaataaaatg 464
              |||||||||||||||||||||
Sbjct: 116023 gctattgcaggcaataaaatg 116003



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>emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 in linkage group 9,
             complete sequence
          Length = 180734

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   aaaaattgttattattgctat 448
             |||||||||||||||||||||
Sbjct: 63775 aaaaattgttattattgctat 63755



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>ref|XM_001019838.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00138560)
            mRNA, complete cds
          Length = 8511

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 432  attgttattattgctattgc 451
            ||||||||||||||||||||
Sbjct: 1381 attgttattattgctattgc 1362



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>ref|XM_001014415.1| Tetrahymena thermophila SB210 cation channel family protein
            (TTHERM_00522370) mRNA, complete cds
          Length = 9876

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 432  attgttattattgctattgc 451
            ||||||||||||||||||||
Sbjct: 9009 attgttattattgctattgc 8990



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>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence
          Length = 22422827

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 432     attgttattattgctattgc 451
               ||||||||||||||||||||
Sbjct: 6594548 attgttattattgctattgc 6594567



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>gb|AC188106.1| Pongo pygmaeus abelii chromosome UNK clone CH276-57H12, complete sequence
          Length = 198879

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    agaaatgtattatatattac 306
              ||||||||||||||||||||
Sbjct: 148888 agaaatgtattatatattac 148869



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>ref|XM_636429.1| Dictyostelium discoideum hypothetical protein (DDB0218196), partial
            mRNA
          Length = 3920

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 432  attgttattattgctattgc 451
            ||||||||||||||||||||
Sbjct: 2633 attgttattattgctattgc 2614



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>gb|U41557.1| Caenorhabditis elegans cosmid C50F7, complete sequence
          Length = 31414

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   ctggatatcgaaaaattgtt 437
             ||||||||||||||||||||
Sbjct: 19262 ctggatatcgaaaaattgtt 19281



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>gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, complete sequence
          Length = 209731

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    ttgttattattgctattgca 452
              ||||||||||||||||||||
Sbjct: 155400 ttgttattattgctattgca 155419



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>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence
          Length = 213684

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    agacaaaggaacaagcatca 225
              ||||||||||||||||||||
Sbjct: 164289 agacaaaggaacaagcatca 164308



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>gb|AY319931.1| Pristionchus pacificus BAC PPBAC-7E22 sequence
          Length = 126255

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    aaagctacaatggagaaatg 293
              ||||||||||||||||||||
Sbjct: 100850 aaagctacaatggagaaatg 100831



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>dbj|AK157449.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830216N24 product:unclassifiable, full
            insert sequence
          Length = 7801

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  agacaaaggaacaagcatca 225
            ||||||||||||||||||||
Sbjct: 6043 agacaaaggaacaagcatca 6062



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>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   attgttattattgctattgc 451
             ||||||||||||||||||||
Sbjct: 14870 attgttattattgctattgc 14889



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>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177941

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    attgttattattgctattgc 451
              ||||||||||||||||||||
Sbjct: 118974 attgttattattgctattgc 118993



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>emb|AL157407.11| Human DNA sequence from clone RP4-609E1 on chromosome 1p31.2-32.1
             Contains the ARHI gene for ras homolog gene family member
             I, part of a novel gene (FLJ38762),  ADP-ribosylation
             factor-like 5 (ARL5) pseudogene and the 3' end of a
             putative NFkB activating protein 373, complete sequence
          Length = 142396

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   gcaataaaatgacctgttgg 473
             ||||||||||||||||||||
Sbjct: 10780 gcaataaaatgacctgttgg 10761



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>emb|AL121914.31|HSJ1167H4 Human DNA sequence from clone RP5-1167H4 on chromosome 20 Contains the
              C20orf108 gene, the STK6 gene for serine/threonine kinase
              6, the CSTF1 gene for cleavage stimulation factor 3'
              pre-RNA subunit 1 (50 kDa), the C20orf32 gene for a novel
              SH3 domain-containing protein (HEF like protein, HEFL), the
              RPL39P gene for ribosomal protein L39 pseudogene and two
              CpG islands, complete sequence
          Length = 135693

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    tattatatattacagtgctt 313
              ||||||||||||||||||||
Sbjct: 130156 tattatatattacagtgctt 130175



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>gb|AC007254.3| Homo sapiens BAC clone RP11-509C20 from 2, complete sequence
          Length = 136417

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ttgttattattgctattgca 452
             ||||||||||||||||||||
Sbjct: 30990 ttgttattattgctattgca 31009



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>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete
             sequence
          Length = 207534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   agacaaaggaacaagcatca 225
             ||||||||||||||||||||
Sbjct: 72500 agacaaaggaacaagcatca 72519



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>emb|AJ639922.1| Uncultured bacterium partial pks7 gene for polyketide synthase I
          Length = 2487

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  ctcgatggatccgcagcagc 62
           ||||||||||||||||||||
Sbjct: 249 ctcgatggatccgcagcagc 268



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>gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, complete sequence
          Length = 90243

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   gatatcgaaaaattgttatt 440
             ||||||||||||||||||||
Sbjct: 19843 gatatcgaaaaattgttatt 19862



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>gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, complete sequence
          Length = 110999

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   agaaatgtattatatattac 306
             ||||||||||||||||||||
Sbjct: 23831 agaaatgtattatatattac 23812



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>gb|AC006212.1|AC006212 Homo sapiens, clone hRPK.14_A_1, complete sequence
          Length = 157772

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   attgttattattgctattgc 451
             ||||||||||||||||||||
Sbjct: 82930 attgttattattgctattgc 82949



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>gb|AC131687.4| Mus musculus BAC clone RP23-379C1 from 14, complete sequence
          Length = 176044

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    tgagatttcagacatcaggt 393
              ||||||||||||||||||||
Sbjct: 146351 tgagatttcagacatcaggt 146332


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 82,382,366
Number of extensions: 4239902
Number of successful extensions: 316482
Number of sequences better than 10.0: 51
Number of HSP's gapped: 316482
Number of HSP's successfully gapped: 57
Length of query: 499
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 477
Effective length of database: 18,508,616,841
Effective search space: 8828610233157
Effective search space used: 8828610233157
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 13 (26.3 bits)
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