>Q8W207:CSN2_ARATH COP9 signalosome complex subunit 2 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 439
 Score = 70.5 bits (171), Expect = 7e-12
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = +2

Query: 356 DADMEDYGFEYSDDEPEEQDVDIENQYYNSKGLV 457
           DADMEDYGFEYSD+E EEQDVDIENQYYNSKG+V
Sbjct: 4   DADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMV 37

>O01422:CSN2_CAEEL COP9 signalosome complex subunit 2 - Caenorhabditis elegans|
          Length = 495

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDYGFEY DD   E DVD+ENQYY +KGL
Sbjct: 8   DDEDYGFEYEDDSGSEPDVDMENQYYTAKGL 38

>Q94899:CSN2_DROME COP9 signalosome complex subunit 2 - Drosophila melanogaster (Fruit|
           fly)
          Length = 444

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDYG EYS+D   E DVD+ENQYYNSK L
Sbjct: 12  DDEDYGLEYSEDSNSEPDVDLENQYYNSKAL 42

>Q6IR75:CSN2_XENLA COP9 signalosome complex subunit 2 - Xenopus laevis (African clawed|
           frog)
          Length = 441

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDY  EYS+D   E +VD+ENQYYNSK L
Sbjct: 10  DEEDYDLEYSEDSNSEPNVDLENQYYNSKAL 40

>P61203:CSN2_RAT COP9 signalosome complex subunit 2 - Rattus norvegicus (Rat)|
          Length = 443

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDY  EYS+D   E +VD+ENQYYNSK L
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKAL 42

>P61202:CSN2_MOUSE COP9 signalosome complex subunit 2 - Mus musculus (Mouse)|
          Length = 443

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDY  EYS+D   E +VD+ENQYYNSK L
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKAL 42

>P61201:CSN2_HUMAN COP9 signalosome complex subunit 2 - Homo sapiens (Human)|
          Length = 443

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDY  EYS+D   E +VD+ENQYYNSK L
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKAL 42

>Q6IQT4:CSN2_DANRE COP9 signalosome complex subunit 2 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 443

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGL 454
           D EDY  EYS+D   E +VD+ENQYYNSK L
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKAL 42

>Q9HFR0:CSN2_SCHPO COP9 signalosome complex subunit 2 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 437

 Score = 37.7 bits (86), Expect = 0.048
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = +2

Query: 362 DMEDYGFEYSDDEPE--EQDVDIENQYYNSKGL 454
           D E+Y FE+ DD+ +  E  VD+EN YYNSK L
Sbjct: 9   DDENYDFEFEDDDDDMIEPYVDVENCYYNSKSL 41

>O75683:SURF6_HUMAN Surfeit locus protein 6 - Homo sapiens (Human)|
          Length = 361

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -2

Query: 374 SPPCPHLTIDTTRTKKQDTVTERNPRERETATIQTVGNREDESGGH*SRE*GLPEPMTAG 195
           S   P     T   K Q + T   P+++   T +    RE+++  H ++  G   P  +G
Sbjct: 20  SHSAPEQQARTRAGKTQGSETAGPPKKKRKKTQKKFRKREEKAAEHKAKSLGEKSPAASG 79

Query: 194 KRRPE 180
            RRPE
Sbjct: 80  ARRPE 84

>Q8BZX4:SFR12_MOUSE Splicing factor, arginine/serine-rich 12 - Mus musculus (Mouse)|
          Length = 494

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 17/60 (28%), Positives = 36/60 (60%)
 Frame = -2

Query: 434 TGSQCRRLAPQARRPNTRNRSPPCPHLTIDTTRTKKQDTVTERNPRERETATIQTVGNRE 255
           + S+  R +   +R ++R+ SP   +   +  R K++D +++R  RER T+T ++ G+R+
Sbjct: 373 SSSRSPRTSKTVKRKSSRSPSPRGRNKK-EKKREKERDHISDRRERERSTSTKKSSGDRD 431

>P39457:PLB1_PENCH Lysophospholipase precursor - Penicillium chrysogenum (Penicillium|
           notatum)
          Length = 612

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 14/39 (35%), Positives = 26/39 (66%)
 Frame = +2

Query: 131 PSSLTNPNSRPRRSIAARVASSPPSWVQVNPTPAISALR 247
           P+S++ P SRP    AA+++++  SW++V     +SAL+
Sbjct: 20  PTSVSCPASRPTVRSAAKLSTNETSWLEVRRGKTLSALK 58

>Q92504:KE4_HUMAN Zinc transporter SLC39A7 - Homo sapiens (Human)|
          Length = 469

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = -1

Query: 351 HRH-HAHQKTGHGHGK--KPS*ERNSDNPDRGESRR*KRRALIAGVGFT*THDGGEEATR 181
           H H H+H +  HGHG+  + + E+ S   +  E+R  ++R      G T   DG      
Sbjct: 250 HGHAHSHTRGSHGHGRQERSTKEKQSSEEEEKETRGVQKRR----GGSTVPKDGPVRPQN 305

Query: 180 AAMERRGREL 151
           A  E+RG +L
Sbjct: 306 AEEEKRGLDL 315

>Q6C931:SPT16_YARLI FACT complex subunit SPT16 - Yarrowia lipolytica (Candida lipolytica)|
          Length = 1003

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 356  DADMEDYGFEYSDDEPEEQDVDIE 427
            D + E+  FE SDDEPE++D D E
Sbjct: 939  DQEEEESEFEVSDDEPEDEDEDSE 962

>Q86YV5:SG223_HUMAN Tyrosine-protein kinase SgK223 - Homo sapiens (Human)|
          Length = 1406

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 128 NPSSLTNPNSRPRRSIAARVASSPPS--WVQVNPTPAISALRFHLLDS 265
           +PS    P   P++ I +R ASSP    W Q +P P  ++ + +L  S
Sbjct: 805 SPSGPQQPPPLPQKKIVSRAASSPDGFFWTQGSPKPGTASPKLNLSHS 852

>Q8CHP0:ZC3H3_MOUSE Zinc finger CCCH domain-containing protein 3 - Mus musculus (Mouse)|
          Length = 950

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
 Frame = -2

Query: 440 CSTGSQCRRLAPQARRPNTRNRSPPCPHLTIDTTRTK-------KQDTVTERNPRE 294
           C  GSQC+ L    +R   R  +PP P  +    R+K       ++ T T+R+ R+
Sbjct: 782 CPRGSQCQLLHRNQKRHGRRTAAPPIPGPSDGAPRSKASAGHVLRKPTTTQRSVRQ 837

>Q24459:PCL_DROME Polycomb protein Pcl - Drosophila melanogaster (Fruit fly)|
          Length = 1043

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -2

Query: 686 HFTLNGTHLTANLTTAQYTQRRLPYIKIPNGTPLLVENEDTRGSWTYNTPIGISSSDGTA 507
           H+T   T L+++LTTAQ     +P I+     P L+++     S   ++ +  SS  GTA
Sbjct: 201 HYTETPTSLSSSLTTAQQPSPIIPAIQHKAILP-LIDSSTADSSSCSSSSVSSSSYSGTA 259

Query: 506 T 504
           T
Sbjct: 260 T 260


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 123,962,193
Number of extensions: 2643375
Number of successful extensions: 7606
Number of sequences better than 10.0: 17
Number of HSP's gapped: 7565
Number of HSP's successfully gapped: 17
Length of query: 253
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 142
Effective length of database: 70,239,694
Effective search space: 9974036548
Effective search space used: 9974036548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)