ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68j21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018684.1| Zea mays clone EL01N0511G04.d mRNA sequence 131 4e-27
2gb|AY106051.1| Zea mays PCO106138 mRNA sequence 131 4e-27
3ref|NM_001049281.1| Oryza sativa (japonica cultivar-group) Os01g... 115 2e-22
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
6dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7dbj|AK107911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
8dbj|AK103258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
9ref|NM_128257.3| Arabidopsis thaliana FUS12 (FUSCA 12) (FUS12) m... 94 9e-16
10gb|AY133536.1| Arabidopsis thaliana At2g26990/T20P8.4 mRNA, comp... 94 9e-16
11gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map... 94 9e-16
12gb|AF395058.1|AF395058 Arabidopsis thaliana CSN complex subunit ... 94 9e-16
13gb|AY050437.1| Arabidopsis thaliana At2g26990/T20P8.4 mRNA, comp... 94 9e-16
14gb|AY087622.1| Arabidopsis thaliana clone 37160 mRNA, complete s... 94 9e-16
15emb|BX822049.1|CNS0A968 Arabidopsis thaliana Full-length cDNA Co... 94 9e-16
16gb|BT027122.1| Gasterosteus aculeatus clone CFW177-A09 mRNA sequ... 50 0.012
17gb|AC189568.1| Brassica rapa subsp. pekinensis clone KBrH009I04,... 44 0.72
18gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, c... 44 0.72
19ref|XM_001222270.1| Chaetomium globosum CBS 148.51 hypothetical ... 42 2.8 
>gb|BT018684.1| Zea mays clone EL01N0511G04.d mRNA sequence
          Length = 1715
 Score =  131 bits (66), Expect = 4e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||||||||||||||||||||| |||||||| || ||||| ||||| |||||||| ||
Sbjct: 139 agatgcggacatggaggactacgggttcgagtactctgacgaagagccggaggagcagga 198

                                                     
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggt 456
            |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 199 tgtcgacattgagaaccagtattacaactccaaaggtttggt 240
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>gb|AY106051.1| Zea mays PCO106138 mRNA sequence
          Length = 722

 Score =  131 bits (66), Expect = 4e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||||||||||||||||||||| |||||||| || ||||| ||||| |||||||| ||
Sbjct: 121 agatgcggacatggaggactacgggttcgagtactctgacgaagagccggaggagcagga 180

                                                     
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggt 456
            |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 181 tgtcgacattgagaaccagtattacaactccaaaggtttggt 222
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>ref|NM_001049281.1| Oryza sativa (japonica cultivar-group) Os01g0279200 (Os01g0279200)
           mRNA, complete cds
          Length = 1760

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 356 gatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaagac 415
           ||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 122 gatgcggacatggaggattacgggttcgagtactccgacgacgagccggaggagcaggat 181

                                                     
Query: 416 gtcgacattgagaaccagtactacaactctaaaggtttggtt 457
           || ||||| |||||||||||||||||||| |||||| |||||
Sbjct: 182 gttgacatcgagaaccagtactacaactccaaaggtatggtt 223
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                           
Query: 355     agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
               |||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 9877597 agatgcggacatggaggattacgggttcgagtactccgacgacgagccggaggagcagga 9877656

                                                     
Query: 415     cgtcgacattgagaaccagtactacaactctaaaggtt 452
                || ||||| |||||||||||||||||||| |||||||
Sbjct: 9877657 tgttgacatcgagaaccagtactacaactccaaaggtt 9877694
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                          
Query: 355    agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
              |||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 141847 agatgcggacatggaggattacgggttcgagtactccgacgacgagccggaggagcagga 141906

                                                    
Query: 415    cgtcgacattgagaaccagtactacaactctaaaggtt 452
               || ||||| |||||||||||||||||||| |||||||
Sbjct: 141907 tgttgacatcgagaaccagtactacaactccaaaggtt 141944
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>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0003H10
          Length = 142418

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                         
Query: 355   agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
             |||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 13363 agatgcggacatggaggattacgggttcgagtactccgacgacgagccggaggagcagga 13422

                                                   
Query: 415   cgtcgacattgagaaccagtactacaactctaaaggtt 452
              || ||||| |||||||||||||||||||| |||||||
Sbjct: 13423 tgttgacatcgagaaccagtactacaactccaaaggtt 13460
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>dbj|AK107911.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-G06, full
           insert sequence
          Length = 762

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 356 gatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaagac 415
           ||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 151 gatgcggacatggaggattacgggttcgagtactccgacgacgagccggaggagcaggat 210

                                                     
Query: 416 gtcgacattgagaaccagtactacaactctaaaggtttggtt 457
           || ||||| |||||||||||||||||||| |||||| |||||
Sbjct: 211 gttgacatcgagaaccagtactacaactccaaaggtatggtt 252
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>dbj|AK103258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124C01, full
           insert sequence
          Length = 1762

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 356 gatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaagac 415
           ||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 123 gatgcggacatggaggattacgggttcgagtactccgacgacgagccggaggagcaggat 182

                                                     
Query: 416 gtcgacattgagaaccagtactacaactctaaaggtttggtt 457
           || ||||| |||||||||||||||||||| |||||| |||||
Sbjct: 183 gttgacatcgagaaccagtactacaactccaaaggtatggtt 224
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>ref|NM_128257.3| Arabidopsis thaliana FUS12 (FUSCA 12) (FUS12) mRNA, complete cds
          Length = 1672

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||| |||||||||||||| || ||||||||||| || || ||||  ||||| |||||
Sbjct: 184 agatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaaga 243

                                                      
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggtt 457
            || ||||||||||||||||| || |||||||||||| |||||
Sbjct: 244 tgttgacattgagaaccagtattataactctaaaggtatggtt 286
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>gb|AY133536.1| Arabidopsis thaliana At2g26990/T20P8.4 mRNA, complete cds
          Length = 1320

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||| |||||||||||||| || ||||||||||| || || ||||  ||||| |||||
Sbjct: 9   agatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaaga 68

                                                      
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggtt 457
            || ||||||||||||||||| || |||||||||||| |||||
Sbjct: 69  tgttgacattgagaaccagtattataactctaaaggtatggtt 111
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>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
             sequence
          Length = 99345

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                         
Query: 354   tagatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaag 413
             ||||||| |||||||||||||| || ||||||||||| || || ||||  ||||| ||||
Sbjct: 21746 tagatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaag 21687

                                                    
Query: 414   acgtcgacattgagaaccagtactacaactctaaaggtt 452
             | || ||||||||||||||||| || |||||||||||||
Sbjct: 21686 atgttgacattgagaaccagtattataactctaaaggtt 21648
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>gb|AF395058.1|AF395058 Arabidopsis thaliana CSN complex subunit 2 (CSN2) mRNA, complete
           cds
          Length = 1336

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||| |||||||||||||| || ||||||||||| || || ||||  ||||| |||||
Sbjct: 10  agatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaaga 69

                                                      
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggtt 457
            || ||||||||||||||||| || |||||||||||| |||||
Sbjct: 70  tgttgacattgagaaccagtattataactctaaaggtatggtt 112
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>gb|AY050437.1| Arabidopsis thaliana At2g26990/T20P8.4 mRNA, complete cds
          Length = 1600

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||| |||||||||||||| || ||||||||||| || || ||||  ||||| |||||
Sbjct: 155 agatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaaga 214

                                                      
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggtt 457
            || ||||||||||||||||| || |||||||||||| |||||
Sbjct: 215 tgttgacattgagaaccagtattataactctaaaggtatggtt 257
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>gb|AY087622.1| Arabidopsis thaliana clone 37160 mRNA, complete sequence
          Length = 1544

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||| |||||||||||||| || ||||||||||| || || ||||  ||||| |||||
Sbjct: 98  agatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaaga 157

                                                      
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggtt 457
            || ||||||||||||||||| || |||||||||||| |||||
Sbjct: 158 tgttgacattgagaaccagtattataactctaaaggtatggtt 200
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>emb|BX822049.1|CNS0A968 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL94ZD10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1607

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 agatgcggacatggaggactacggtttcgagtattcggacgacgagcctgaggagcaaga 414
           |||||| |||||||||||||| || ||||||||||| || || ||||  ||||| |||||
Sbjct: 184 agatgctgacatggaggactatggattcgagtattctgatgaggagcaagaggaacaaga 243

                                                      
Query: 415 cgtcgacattgagaaccagtactacaactctaaaggtttggtt 457
            || ||||||||||||||||| || |||||||||||| |||||
Sbjct: 244 tgttgacattgagaaccagtattataactctaaaggtatggtt 286
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>gb|BT027122.1| Gasterosteus aculeatus clone CFW177-A09 mRNA sequence
          Length = 1790

 Score = 50.1 bits (25), Expect = 0.012
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 425 gagaaccagtactacaactctaaag 449
           |||||||||||||||||||||||||
Sbjct: 154 gagaaccagtactacaactctaaag 178
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>gb|AC189568.1| Brassica rapa subsp. pekinensis clone KBrH009I04, complete sequence
          Length = 162363

 Score = 44.1 bits (22), Expect = 0.72
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 708   tgaatagctatgatcgtattttgatt 733
             |||||||||||||||||| |||||||
Sbjct: 12049 tgaatagctatgatcgtagtttgatt 12074
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>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence
          Length = 192176

 Score = 44.1 bits (22), Expect = 0.72
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 639   tgcagttgtcagattagctgtg 660
             ||||||||||||||||||||||
Sbjct: 16383 tgcagttgtcagattagctgtg 16404
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>ref|XM_001222270.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_06176)
           mRNA, complete cds
          Length = 1497

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 413 gacgtcgacattgagaaccagtactacaa 441
           ||||||||||| |||||| ||||||||||
Sbjct: 82  gacgtcgacatcgagaacaagtactacaa 110


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 100,197,837
Number of extensions: 4631065
Number of successful extensions: 75691
Number of sequences better than 10.0: 19
Number of HSP's gapped: 75691
Number of HSP's successfully gapped: 19
Length of query: 759
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 737
Effective length of database: 18,508,616,841
Effective search space: 13640850611817
Effective search space used: 13640850611817
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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