ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68j12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os11g0634800:Os11g0634800 | 340 | 1e-93 | 2 | AK071285:Os07g0573100 | 325 | 4e-89 | 3 | AK119986: | 57 | 3e-08 | 4 | AK072243:Os05g0164100 | 40 | 0.005 | 5 | AK065086:Os05g0164100 | 40 | 0.005 | 6 | AF456329:Os05g0164100 | 40 | 0.005 | 7 | AK069285:Os03g0294200 | 39 | 0.010 | 8 | AK105724:Os03g0294200 | 38 | 0.013 | 9 | AK102065:Os09g0505800 | 31 | 1.6 | 10 | AK065712:Os08g0530000 | 31 | 2.1 | 11 | AK072452:Os10g0494300 | 30 | 3.7 | 12 | AK121506:Os08g0564300 | 30 | 4.8 | 13 | AK119880:Os08g0564300 | 30 | 4.8 | 14 | AK121684:Os01g0266000 | 29 | 6.2 | 15 | AK121451:Os03g0142800 | 29 | 6.2 | 16 | AK064325:Os03g0142800 | 29 | 6.2 | 17 | AK109730:Os06g0225800 | 29 | 8.1 | 18 | AK101083:Os06g0215400 | 29 | 8.1 | 19 | AK070374:Os05g0222200 | 29 | 8.1 | 20 | AK068591:Os05g0222200 | 29 | 8.1 | 21 | AK066082:Os11g0207400 | 29 | 8.1 |
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>Os11g0634800:Os11g0634800 | Length = 304 Score = 340 bits (873), Expect = 1e-93 Identities = 161/212 (75%), Positives = 184/212 (86%) Frame = +3 Query: 285 VREKPVMSNIGKSTNILWHDCPIGQSERQKLLGQKGCVIWITGLSGSGKSTVACALSREL 464 V K + S +GKSTNI WHDCP+ Q +RQKLL QKGCV+WITGLSGSGKST+ACALSREL Sbjct: 92 VLNKLMTSTVGKSTNIRWHDCPVNQLDRQKLLNQKGCVVWITGLSGSGKSTLACALSREL 151 Query: 465 HYRGHHTYVLDGDNLRHGLNRDLSFKAEDRTENIRRVGEVAKLFADAGTICIASLISPYR 644 H RGH TYVLDGDNLRHGLN+DLSFKA+DR ENIRRVGEVAKLFADAG ICI SLISPY+ Sbjct: 152 HSRGHLTYVLDGDNLRHGLNKDLSFKAKDRAENIRRVGEVAKLFADAGLICITSLISPYK 211 Query: 645 RDRDACRALLPDSRFIEVFMDLPLEICEARDPKGLYKLARTGKIKGFTGVDDPYESPVNS 824 DR ACR LLP+S FIEVF+++PLE+CE RDPKGLYKLAR GKIKGFTG+DDPYE+P + Sbjct: 212 SDRSACRKLLPNSSFIEVFLNVPLEVCEERDPKGLYKLARAGKIKGFTGIDDPYETPSDC 271 Query: 825 EIVIKMEGEECPSPKAMAKQVLSYLEENGYLQ 920 EIVI+ + +CPSPK+MA QV+SYLE NG+ Q Sbjct: 272 EIVIQCKVGDCPSPKSMADQVVSYLEANGFFQ 303
>AK071285:Os07g0573100 | Length = 345 Score = 325 bits (833), Expect = 4e-89 Identities = 153/204 (75%), Positives = 176/204 (86%) Frame = +3 Query: 306 SNIGKSTNILWHDCPIGQSERQKLLGQKGCVIWITGLSGSGKSTVACALSRELHYRGHHT 485 S + K++NI WHDC +GQ++RQKLL QKGCV+WITGLSGSGKST+AC L RELH RG + Sbjct: 140 SIVPKASNIFWHDCAVGQADRQKLLKQKGCVVWITGLSGSGKSTLACTLDRELHTRGKLS 199 Query: 486 YVLDGDNLRHGLNRDLSFKAEDRTENIRRVGEVAKLFADAGTICIASLISPYRRDRDACR 665 YVLDGDNLRHGLN+DL FKAEDR ENIRRVGEVAKLFADAG +CIAS ISPYRRDR++CR Sbjct: 200 YVLDGDNLRHGLNKDLGFKAEDRAENIRRVGEVAKLFADAGLVCIASFISPYRRDRESCR 259 Query: 666 ALLPDSRFIEVFMDLPLEICEARDPKGLYKLARTGKIKGFTGVDDPYESPVNSEIVIKME 845 ALL D FIEVF+++PLE+CE+RDPKGLYKLAR GKIKGFTG+DDPYESP+NSEI IK Sbjct: 260 ALLSDGSFIEVFLNMPLELCESRDPKGLYKLARAGKIKGFTGIDDPYESPLNSEIEIKEV 319 Query: 846 GEECPSPKAMAKQVLSYLEENGYL 917 CPSP MA QV++YLEE G+L Sbjct: 320 DGVCPSPSDMAGQVVTYLEEKGFL 343
>AK119986: | Length = 67 Score = 57.0 bits (136), Expect = 3e-08 Identities = 25/42 (59%), Positives = 30/42 (71%) Frame = +3 Query: 711 PLEICEARDPKGLYKLARTGKIKGFTGVDDPYESPVNSEIVI 836 PLE CE D KG Y AR G IKGFTGVDD YE P ++++V+ Sbjct: 2 PLEFCEKTDRKGNYANARAGNIKGFTGVDDVYEEPTDADLVV 43
>AK072243:Os05g0164100 | Length = 773 Score = 39.7 bits (91), Expect = 0.005 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Frame = +3 Query: 354 GQSERQKLLGQKGCVIWITGLSGSGKSTVACALSRELHYRGH---HTYVLDGDNLRHGLN 524 G E +KL I + GL GK+ A L+R L + GH H V L+HG N Sbjct: 365 GSKEDRKL------AIVLVGLPARGKTFTAAKLTRYLRWLGHETRHFNVGKYRRLKHGAN 418 Query: 525 RDLSFKAEDRTENIRRVGEVAKL 593 + F +D E I EVA L Sbjct: 419 QSADFFRDDNPEGIEARNEVAAL 441
>AK065086:Os05g0164100 | Length = 772 Score = 39.7 bits (91), Expect = 0.005 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Frame = +3 Query: 354 GQSERQKLLGQKGCVIWITGLSGSGKSTVACALSRELHYRGH---HTYVLDGDNLRHGLN 524 G E +KL I + GL GK+ A L+R L + GH H V L+HG N Sbjct: 364 GSKEDRKL------AIVLVGLPARGKTFTAAKLTRYLRWLGHETRHFNVGKYRRLKHGAN 417 Query: 525 RDLSFKAEDRTENIRRVGEVAKL 593 + F +D E I EVA L Sbjct: 418 QSADFFRDDNPEGIEARNEVAAL 440
>AF456329:Os05g0164100 | Length = 740 Score = 39.7 bits (91), Expect = 0.005 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Frame = +3 Query: 354 GQSERQKLLGQKGCVIWITGLSGSGKSTVACALSRELHYRGH---HTYVLDGDNLRHGLN 524 G E +KL I + GL GK+ A L+R L + GH H V L+HG N Sbjct: 332 GSKEDRKL------AIVLVGLPARGKTFTAAKLTRYLRWLGHETRHFNVGKYRRLKHGAN 385 Query: 525 RDLSFKAEDRTENIRRVGEVAKL 593 + F +D E I EVA L Sbjct: 386 QSADFFRDDNPEGIEARNEVAAL 408
>AK069285:Os03g0294200 | Length = 653 Score = 38.5 bits (88), Expect = 0.010 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 3/108 (2%) Frame = +3 Query: 279 SEVREKPVMSNIGKSTNILWHDCPIGQSERQKLLGQKGCVIWITGLSGSGKSTVACALSR 458 SE ++ P + + D G E +KL I + GL GK+ A L+R Sbjct: 214 SEAKDMPAAEGAVAAAAVA--DQMYGPKEDRKL------AIVLVGLPARGKTFTAAKLTR 265 Query: 459 ELHYRGH---HTYVLDGDNLRHGLNRDLSFKAEDRTENIRRVGEVAKL 593 L + GH H V L+HG+N+ F D E + EVA L Sbjct: 266 YLRWLGHETKHFNVGKYRRLKHGINQTADFFRGDNKEGVEARNEVAAL 313
>AK105724:Os03g0294200 | Length = 435 Score = 38.1 bits (87), Expect = 0.013 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Frame = +3 Query: 354 GQSERQKLLGQKGCVIWITGLSGSGKSTVACALSRELHYRGH---HTYVLDGDNLRHGLN 524 G E +KL I + GL GK+ A L+R L + GH H V L+HG+N Sbjct: 19 GPKEDRKL------AIVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGIN 72 Query: 525 RDLSFKAEDRTENIRRVGEVAKL 593 + F D E + EVA L Sbjct: 73 QTADFFRGDNKEGVEARNEVAAL 95
>AK102065:Os09g0505800 | Length = 496 Score = 31.2 bits (69), Expect = 1.6 Identities = 17/52 (32%), Positives = 30/52 (57%) Frame = +3 Query: 396 VIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLRHGLNRDLSFKAED 551 VI ++G + SGK+TV + ++LH H +++ D+ GL + S A+D Sbjct: 77 VIGVSGGTASGKTTVCDMIIQQLH--DHRVVLVNQDSFYRGLTAEESAHAQD 126
>AK065712:Os08g0530000 | Length = 491 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = +3 Query: 396 VIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLRHGLNRDLSFKAED 551 VI ++G + SGK+TV + ++LH H +++ D+ GL + S + +D Sbjct: 73 VIGVSGGTASGKTTVCDMIIQQLH--DHRVVLVNQDSFYRGLTEEESDRVQD 122
>AK072452:Os10g0494300 | Length = 723 Score = 30.0 bits (66), Expect = 3.7 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = +3 Query: 384 QKGCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLRHGLNRDLSFKA 545 + G + + G SGSGKST+ AL+ L LDG L +G +LSF A Sbjct: 99 EPGTITALMGPSGSGKSTLLDALAGRLAANA----FLDGTVLLNGRKANLSFGA 148
>AK121506:Os08g0564300 | Length = 1344 Score = 29.6 bits (65), Expect = 4.8 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLR 512 G I + G SGSGKSTV + R + T +LDG +LR Sbjct: 460 GKTIALVGSSGSGKSTVVSLIER-FYEPNAGTILLDGHDLR 499
>AK119880:Os08g0564300 | Length = 952 Score = 29.6 bits (65), Expect = 4.8 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLR 512 G I + G SGSGKSTV + R + T +LDG +LR Sbjct: 376 GKTIALVGSSGSGKSTVVSLIER-FYEPNAGTILLDGHDLR 415
>AK121684:Os01g0266000 | Length = 966 Score = 29.3 bits (64), Expect = 6.2 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Frame = +3 Query: 642 RRDRDACRALLPDSRFIE-----VFMDLPLEICEARDPKGLYKLARTGKIKGFTGVDDPY 806 +R+R C + DS +D LE+ A LY R + VDD Sbjct: 563 QRERGFCNDFISDSPSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDFYVDD-- 620 Query: 807 ESPVNSEIVIKMEGEECPSPKAMAKQVLSYLEENGYLQA*HTYSR 941 VN I++ +G P+A +K+ +S + E Y H Y++ Sbjct: 621 -QDVNRLIIVTQDG-----PQAFSKEEISRINEGLYYYENHAYNQ 659
>AK121451:Os03g0142800 | Length = 1505 Score = 29.3 bits (64), Expect = 6.2 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLR---HGLNRDLSFKAEDRT 557 G I I G +GSGKST+ AL R + G + D D R H L LS +D T Sbjct: 1289 GKKIGIVGRTGSGKSTLIQALFRLIEPTGGKVIIDDVDISRIGLHDLRSRLSIIPQDPT 1347
>AK064325:Os03g0142800 | Length = 507 Score = 29.3 bits (64), Expect = 6.2 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLR---HGLNRDLSFKAEDRT 557 G I I G +GSGKST+ AL R + G + D D R H L LS +D T Sbjct: 291 GKKIGIVGRTGSGKSTLIQALFRLIEPTGGKVIIDDVDISRIGLHDLRSRLSIIPQDPT 349
>AK109730:Os06g0225800 | Length = 264 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHY 470 G I++ G+ GSGKSTVA L+ L Y Sbjct: 51 GRCIYLVGMMGSGKSTVAKILAEVLGY 77
>AK101083:Os06g0215400 | Length = 679 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 23/81 (28%) Frame = +3 Query: 354 GQSERQKLLGQKGCV----------------------IWITGLSGSGKSTVACALSRELH 467 G+ R++LLGQ G V + +TG S G +T+AC R++ Sbjct: 482 GRKFRERLLGQWGVVDVNDCCSCATFLVETGRVDAQRLCVTGESAGGFTTLACLAFRQIF 541 Query: 468 YRGHHTY-VLDGDNLRHGLNR 527 G Y + D +LR G+++ Sbjct: 542 KAGSSLYGIADLASLRAGMHK 562
>AK070374:Os05g0222200 | Length = 700 Score = 28.9 bits (63), Expect = 8.1 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLRHGLNRDLSF 539 G V+ I G SGSGKST+ ALS L +L G L +G R L + Sbjct: 69 GRVVAIMGPSGSGKSTLLDALSGRL----ARNVLLTGKVLLNGKKRRLDY 114
>AK068591:Os05g0222200 | Length = 700 Score = 28.9 bits (63), Expect = 8.1 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVLDGDNLRHGLNRDLSF 539 G V+ I G SGSGKST+ ALS L +L G L +G R L + Sbjct: 69 GRVVAIMGPSGSGKSTLLDALSGRL----ARNVLLTGKVLLNGKKRRLDY 114
>AK066082:Os11g0207400 | Length = 268 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +3 Query: 390 GCVIWITGLSGSGKSTVACALSRELHYRGHHTYVL 494 GCV+ I G+ G GK+T+A + + R H + ++ Sbjct: 186 GCVLPIWGVKGVGKTTIARLVCDDRKVRSHFSMII 220 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,165,452 Number of extensions: 851779 Number of successful extensions: 2157 Number of sequences better than 10.0: 21 Number of HSP's gapped: 2152 Number of HSP's successfully gapped: 21 Length of query: 423 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 320 Effective length of database: 11,275,632 Effective search space: 3608202240 Effective search space used: 3608202240 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
