ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65k20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 99.6 bits (50), Expect = 4e-17 Identities = 50/50 (100%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6383 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 6334 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||| ||||||||||||| ||||||||||||| |||||||||| Sbjct: 6335 atataagagtgtttagatcactactttagtgatctaaacgctcttatatt 6384
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 95.6 bits (48), Expect = 6e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 21671 atataagagcgtttagatcactaaagtagtgatctaaacgctcttatatttc 21722 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatattt 2130 ||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 21719 atataagagcgtttagatcactactttagtgatctaaacgctcttatattt 21669
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 91.7 bits (46), Expect = 1e-14 Identities = 49/50 (98%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 7601 atataagagcgtttagatcactaaagtagtgatctaaacgctcttatatt 7552 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 7553 atataagagcgtttagatcactactttagtgatctaaacgctcttatatt 7602
>gb|DQ995513.1| Hordeum vulgare clone 604d05_c-69 genomic sequence Length = 20922 Score = 87.7 bits (44), Expect = 2e-13 Identities = 50/52 (96%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 |||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 14578 atataagagcgtttagatcactgaagtagtgatctaaacgctcttatatttc 14527 Score = 83.8 bits (42), Expect = 2e-12 Identities = 48/50 (96%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 16013 atataagagcgtttagatcactaaagtagtgatataaacgctcttatatt 15964 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 14530 atataagagcgtttagatcactacttcagtgatctaaacgctcttatatttc 14581 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 15965 atataagagcgtttatatcactactttagtgatctaaacgctcttatatt 16014
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||| || Sbjct: 116886 atatatgagcgtttagatcaccaaagtagtgatctaaatactcttatatttctttataga 116945 Query: 2140 cggagta 2146 |||||| Sbjct: 116946 gggagta 116952 Score = 52.0 bits (26), Expect = 0.009 Identities = 59/70 (84%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||||||| |||||||||||| | ||||||||||| ||| |||||||| ||| ||| Sbjct: 116934 atataagagtatttagatcactactttggtgatctaaacgctcatatatttctttacgga 116875 Query: 2140 cggagtatgt 2149 ||||||||| Sbjct: 116874 gggagtatgt 116865
>emb|CT009586.1| Triticum aestivum Length = 107638 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||| || Sbjct: 24708 atatatgagcgtttagatcaccaaagtagtgatctaaatactcttatatttctttataga 24767 Query: 2140 cggagta 2146 |||||| Sbjct: 24768 gggagta 24774 Score = 52.0 bits (26), Expect = 0.009 Identities = 59/70 (84%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||||||| |||||||||||| | ||||||||||| ||| |||||||| ||| ||| Sbjct: 24756 atataagagtatttagatcactactttggtgatctaaacgctcatatatttctttacgga 24697 Query: 2140 cggagtatgt 2149 ||||||||| Sbjct: 24696 gggagtatgt 24687
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||| || Sbjct: 11690 atatatgagcgtttagatcaccaaagtagtgatctaaatactcttatatttctttataga 11749 Query: 2140 cggagta 2146 |||||| Sbjct: 11750 gggagta 11756 Score = 52.0 bits (26), Expect = 0.009 Identities = 59/70 (84%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||||||| |||||||||||| | ||||||||||| ||| |||||||| ||| ||| Sbjct: 11738 atataagagtatttagatcactactttggtgatctaaacgctcatatatttctttacgga 11679 Query: 2140 cggagtatgt 2149 ||||||||| Sbjct: 11678 gggagtatgt 11669
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||| || Sbjct: 14408 atatatgagcgtttagatcaccaaagtagtgatctaaatactcttatatttctttataga 14467 Query: 2140 cggagta 2146 |||||| Sbjct: 14468 gggagta 14474 Score = 52.0 bits (26), Expect = 0.009 Identities = 59/70 (84%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||||||| |||||||||||| | ||||||||||| ||| |||||||| ||| ||| Sbjct: 14456 atataagagtatttagatcactactttggtgatctaaacgctcatatatttctttacgga 14397 Query: 2140 cggagtatgt 2149 ||||||||| Sbjct: 14396 gggagtatgt 14387
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 83.8 bits (42), Expect = 2e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 762 atataagagcgtttagatcactaaaatagtgatcaaaacactcttatatt 811 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||| |||| |||||||| ||||||||||||| |||||||||| Sbjct: 810 atataagagtgttttgatcactattttagtgatctaaacgctcttatatt 761 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagt 2109 |||||||| |||||||||||||||| |||| Sbjct: 8847 atataagatcgtttagatcactaaaatagt 8876
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Minus Query: 2081 tataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 2876 tataagagcgtttagatcactaaagtagtaatctaaacgctcttatatt 2828 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttata 2127 |||||||||||||||||| |||| ||||||||||||| |||||||| Sbjct: 2829 atataagagcgtttagattactactttagtgatctaaacgctcttata 2876
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Minus Query: 2081 tataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1632 tataagagcgtttagatcactaaagtagtaatctaaacgctcttatatt 1584 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttata 2127 |||||||||||||||||| |||| ||||||||||||| |||||||| Sbjct: 1585 atataagagcgtttagattactactttagtgatctaaacgctcttata 1632
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 79.8 bits (40), Expect = 4e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||||||||||| |||||||| ||||||||| |||||| |||||||||||| ||| ||| Sbjct: 5013 atataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttctttacgga 4954 Query: 2140 cggagtat 2147 ||||||| Sbjct: 4953 gggagtat 4946 Score = 46.1 bits (23), Expect = 0.54 Identities = 44/51 (86%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatattt 2130 |||||||||||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 4965 atataagagcgtttaggtcactacttgagtgatctgaacgctcttatattt 5015
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 79.8 bits (40), Expect = 4e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttcattatgga 2139 ||||||||||||| |||||||| ||||||||| |||||| |||||||||||| ||| ||| Sbjct: 4782 atataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttctttacgga 4723 Query: 2140 cggagtat 2147 ||||||| Sbjct: 4722 gggagtat 4715 Score = 46.1 bits (23), Expect = 0.54 Identities = 44/51 (86%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatattt 2130 |||||||||||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 4734 atataagagcgtttaggtcactacttgagtgatctgaacgctcttatattt 4784
>gb|AF522460.1| Aegilops tauschii csAtPR5 mRNA, complete cds Length = 2438 Score = 77.8 bits (39), Expect = 2e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1180 tggccactctatgtgtatggcgtggttgctgctcgagacagcgtggaccgcaaccgcaac 1239 ||||||||| | ||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1314 tggccactcaaagtgtatggcaaggttgctgctcgagacactgtggaccgcaaccgcaac 1373 Query: 1240 ctcctcttctctcgg 1254 | || ||||||||| Sbjct: 1374 attctgttctctcgg 1388 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1340 atgttgactttgaagttgaactaaaagta 1368 |||| ||||||||||||||||| |||||| Sbjct: 1474 atgtcgactttgaagttgaactcaaagta 1502
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 77.8 bits (39), Expect = 2e-10 Identities = 48/51 (94%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatattt 2130 ||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 4355 atataagagtgtctagatcactaaagtagtgatctaaacgctcttatattt 4305 Score = 71.9 bits (36), Expect = 9e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 4307 atataagagcgtttagatcactactttagtgatctagacactcttatatttc 4358
>gb|DQ537336.1| Triticum aestivum clones BAC 1289J04; BAC 1001P20, complete sequence Length = 206063 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||||||||||| |||||||||||| ||||||| |||||||||| Sbjct: 13814 atataagagcgtttagattactaaagtagtgttctaaacgctcttatatt 13765 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||| ||||| |||| |||||||| |||||||||| Sbjct: 13766 atataagagcgtttagaacactactttagtaatctaaacgctcttatatt 13815 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagt 2109 |||||||| |||||||||||||||| |||| Sbjct: 26748 atataagatcgtttagatcactaaaatagt 26777
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA, complete cds Length = 975 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||| ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 658 atataaaagcatttagatcactaaagtagtgttctaaacactcttatatt 707
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene, complete cds Length = 1003 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||| ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 750 atataaaagcatttagatcactaaagtagtgttctaaacactcttatatt 799
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA, complete cds Length = 1151 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||| ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 648 atataaaagcatttagatcactaaagtagtgttctaaacactcttatatt 697
>gb|EF028774.1| Triticum aestivum CBF4B-D20 mRNA, complete cds Length = 980 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||| |||| |||| |||| |||||||||||||||||||||||| Sbjct: 771 atataagagcatttaaatcattaaaatagtgatctaaacactcttatatt 820
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||| |||| |||| |||| |||||||||||||||||||||||| Sbjct: 756 atataagagcatttaaatcattaaaatagtgatctaaacactcttatatt 805
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 1455 atataagagcgtttagaatactaaaatagtgatctaaacgctcttatatt 1406 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 1407 atataagagcgtttagatcactattttagtattctaaacgctcttatatt 1456
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||| |||| |||| |||| |||||||||||||||||||||||| Sbjct: 713 atataagagcatttaaatcattaaaatagtgatctaaacactcttatatt 762
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||| |||||||||||||| |||| |||||||| |||||||||| Sbjct: 2777 atataagagcatttagatcactaaaatagtaatctaaacgctcttatatt 2728 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 2729 atataagagcgtttagattactattttagtgatctaaatgctcttatatt 2778
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||||| ||||||||||||||||||||||||||| Sbjct: 1008 atataagagcttttagatcactaaagtagtgatctaaa 971
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene, nuclear gene encoding plastid protein, partial cds Length = 9285 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||| ||||||||||||||| ||||| ||||||| |||||||||| Sbjct: 6448 atataagagtgtttagatcactaaaatagtgttctaaacgctcttatatt 6399 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 6400 atataagagcgtttagaacactattttagtgatctaaacactcttatatt 6449
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||| ||||||| ||||||||| |||||| |||||||||||| Sbjct: 73641 atataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 73590
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||| ||||||| ||||||||| |||||| |||||||||||| Sbjct: 7091 atataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 7040
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||| ||||||| ||||||||| |||||| |||||||||||| Sbjct: 6569 atataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 6518
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||| ||||||| ||||||||| |||||| |||||||||||| Sbjct: 7108 atataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 7057
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 61.9 bits (31), Expect = 9e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaac 2118 |||||||||||||||||| ||||||||| |||||||||| Sbjct: 1767 atataagagcgtttagataactaaagtaatgatctaaac 1729
>gb|DQ474240.1| Triticum turgidum lipoxygenase 1 (Lpx-B1.1) gene, partial cds; and Stowaway-Athos miniature inverted-repeat transposable elements, complete sequence Length = 1255 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacact 2121 |||||||| ||||||||||||||||||| |||||||||||| Sbjct: 611 atataagaatgtttagatcactaaagtagggatctaaacact 652
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||||||| |||||| |||| | ||||||||||| |||||||||| Sbjct: 177726 atataagagcgttgagatcattaaaattgtgatctaaactctcttatatt 177677
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||||||||||||||||||| Sbjct: 29806 atataagaccttttagatcactaaagtagtgatctaaa 29769
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||||||||||||||||||| Sbjct: 210 atataagaccttttagatcactaaagtagtgatctaaa 247
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||||||||||||||||||| Sbjct: 210 atataagaccttttagatcactaaagtagtgatctaaa 247
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons 1-3 Length = 2155 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||||||||||||| |||||||||||| |||||| Sbjct: 1320 atataagagcgtttagattactaaagtagtgttctaaa 1283
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 56.0 bits (28), Expect = 6e-04 Identities = 48/54 (88%), Gaps = 3/54 (5%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcacta---aagtagtgatctaaacactcttatattt 2130 ||||||||||||||||||||||| ||||||||||||||| |||| |||||| Sbjct: 74281 atataagagcgtttagatcactagagtagtagtgatctaaacgctctcatattt 74334 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcacta 2102 ||||||||||||||||||||||| Sbjct: 24582 atataagagcgtttagatcacta 24604 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2101 taaagtagtgatctaaacactcttatatt 2129 |||| ||||||||||||| |||||||||| Sbjct: 24609 taaactagtgatctaaacgctcttatatt 24581
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 56.0 bits (28), Expect = 6e-04 Identities = 48/54 (88%), Gaps = 3/54 (5%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcacta---aagtagtgatctaaacactcttatattt 2130 ||||||||||||||||||||||| ||||||||||||||| |||| |||||| Sbjct: 47964 atataagagcgtttagatcactagagtagtagtgatctaaacgctctcatattt 48017
>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds Length = 9755 Score = 56.0 bits (28), Expect = 6e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 2107 agtgatctaaacactcttatatttcattatggacggagta 2146 ||||||||||||||||||||||||| ||| ||| |||||| Sbjct: 8008 agtgatctaaacactcttatatttctttacggagggagta 7969
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 56.0 bits (28), Expect = 6e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 |||||||| |||||||||||||||||||| ||||||| ||||||||||| Sbjct: 2325 atataagaatgtttagatcactaaagtagttatctaaatgatcttatatttc 2274 Score = 48.1 bits (24), Expect = 0.14 Identities = 45/52 (86%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 |||||||| | ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 2277 atataagatcatttagataactactttagtgatctaaacattcttatatttc 2328
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 56.0 bits (28), Expect = 6e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 2103 aagtagtgatctaaacactcttatattt 2130 |||||||||||||||||||||||||||| Sbjct: 111 aagtagtgatctaaacactcttatattt 84
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||| ||||| || |||||||||||| |||||| |||||||||| Sbjct: 150258 atataagagtgtttaaattactaaagtagtgttctaaatgctcttatatt 150209 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||| |||||| ||||| |||| || |||||||||||||||| Sbjct: 150210 atataagagcatttagaacactactttagtaatttaaacactcttatatt 150259
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 103684 atataagagcgtttagaatactaaagtaatgatctaaa 103721
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 ||||||||| |||||||| ||||||||||| |||||| |||||||||| Sbjct: 34528 atataagagtgtttagattactaaagtagtattctaaatgctcttatatt 34577 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||||||| |||||| |||| |||| ||||||||||||||||||| Sbjct: 34576 atataagagcatttagaatactactttagtaatctaaacactcttatatt 34527
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| ||||||||||| |||||||||||| |||||| Sbjct: 902 atataaaagcgtttagattactaaagtagtgttctaaa 939
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| ||||||||||| |||||||||||| |||||| Sbjct: 902 atataaaagcgtttagattactaaagtagtgttctaaa 939
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| ||||||||||| |||||||||||| |||||| Sbjct: 902 atataaaagcgtttagattactaaagtagtgttctaaa 939
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 315 acagcagcagcagcaggtatgcttg 339 ||||||||||||||||||||||||| Sbjct: 20331701 acagcagcagcagcaggtatgcttg 20331725
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 315 acagcagcagcagcaggtatgcttg 339 ||||||||||||||||||||||||| Sbjct: 97734 acagcagcagcagcaggtatgcttg 97758
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1062 Score = 50.1 bits (25), Expect = 0.034 Identities = 45/52 (86%), Gaps = 6/52 (11%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 865 atataagagcgtttagatcacta------tgatctaaacgctcttatatttc 820 Score = 50.1 bits (25), Expect = 0.034 Identities = 45/52 (86%), Gaps = 6/52 (11%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 |||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 823 atataagagcgtttagatca------tagtgatctaaacgctcttatatttc 868
>gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1) gene, complete cds Length = 4971 Score = 50.1 bits (25), Expect = 0.034 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 |||||| ||| |||||||||||||| |||||||| ||| |||||||||||| Sbjct: 3017 atataatagcatttagatcactaaaatagtgatc--aacgctcttatatttc 2968
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 48.1 bits (24), Expect = 0.14 Identities = 47/54 (87%), Gaps = 3/54 (5%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcacta---aagtagtgatctaaacactcttatattt 2130 |||||| |||||||||||||||| ||||||||||||||| |||| |||||| Sbjct: 108448 atataaaagcgtttagatcactagagtagtagtgatctaaacgctctcatattt 108501
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 48.1 bits (24), Expect = 0.14 Identities = 47/54 (87%), Gaps = 3/54 (5%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcacta---aagtagtgatctaaacactcttatattt 2130 |||||| |||||||||||||||| ||||||||||||||| |||| |||||| Sbjct: 85559 atataaaagcgtttagatcactagagtagtagtgatctaaacgctctcatattt 85612
>emb|Y09602.1|HVCPMII H.vulgare gene encoding serine carboxypeptidase II, CP-MII Length = 6225 Score = 48.1 bits (24), Expect = 0.14 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2086 gagcgtttagatcactaaagtagtgatctaaa 2117 |||| ||||||||||||||| ||||||||||| Sbjct: 1306 gagcatttagatcactaaagcagtgatctaaa 1337
>gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1080 Score = 48.1 bits (24), Expect = 0.14 Identities = 45/52 (86%), Gaps = 5/52 (9%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatttc 2131 ||||||||||||||| |||||||| |||||||||| |||||||||||| Sbjct: 868 atataagagcgtttatatcactaa-----tgatctaaacgctcttatatttc 822
>gb|AC161576.8| Mus musculus chromosome 8, clone RP24-315L4, complete sequence Length = 180036 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1987 tcaactctatattttgtatgtct 2009 ||||||||||||||||||||||| Sbjct: 37173 tcaactctatattttgtatgtct 37195 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2025 tcaactctatattttgtatgtc 2046 |||||||||||||||||||||| Sbjct: 37173 tcaactctatattttgtatgtc 37194
>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence Length = 177245 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1987 tcaactctatattttgtatgtct 2009 ||||||||||||||||||||||| Sbjct: 104824 tcaactctatattttgtatgtct 104846 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2025 tcaactctatattttgtatgtc 2046 |||||||||||||||||||||| Sbjct: 104824 tcaactctatattttgtatgtc 104845
>gb|AY750993.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box transcription factor BM5A (VRN-H1) gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 16708 atataaaagcgtttagattactaaagtagtg 16738
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 901 atataaaagcgtttagattactaaagtagtg 931
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 903 atataaaagcgtttagattactaaagtagtg 933
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 902 atataaaagcgtttagattactaaagtagtg 932
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 903 atataaaagcgtttagattactaaagtagtg 933
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 903 atataaaagcgtttagattactaaagtagtg 933
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 902 atataaaagcgtttagattactaaagtagtg 932
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 901 atataaaagcgtttagattactaaagtagtg 931
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 901 atataaaagcgtttagattactaaagtagtg 931
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 900 atataaaagcgtttagattactaaagtagtg 930
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 901 atataaaagcgtttagattactaaagtagtg 931
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtg 2110 |||||| ||||||||||| |||||||||||| Sbjct: 901 atataaaagcgtttagattactaaagtagtg 931
>gb|AC188687.4| Pan troglodytes BAC clone CH251-721E1 from chromosome 7, complete sequence Length = 187603 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1506 gttgaggtttgagaggcttcct 1527 |||||||||||||||||||||| Sbjct: 15443 gttgaggtttgagaggcttcct 15464
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2101 taaagtagtgatctaaacactcttatattt 2130 ||||||||| ||||||||||||||| |||| Sbjct: 61087 taaagtagttatctaaacactcttaaattt 61058
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| |||||||| || |||||||||||| |||||| Sbjct: 10727 atataaaagcgtttaaattactaaagtagtgttctaaa 10764
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 44.1 bits (22), Expect = 2.1 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||| ||| ||||||||| ||| ||||||||||||| |||||||||| Sbjct: 549 atataaaagcatttagatcattaa-gtagtgatctaaatgctcttatatt 597
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds Length = 4768 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 1124 atataagaccttttagatcact-aagtagtgatctaaa 1160
>gb|AC092441.4| Homo sapiens BAC clone RP11-455K24 from 7, complete sequence Length = 50221 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1506 gttgaggtttgagaggcttcct 1527 |||||||||||||||||||||| Sbjct: 32979 gttgaggtttgagaggcttcct 33000
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| |||||||| || |||||||||||| |||||| Sbjct: 62448 atataaaagcgtttaaattactaaagtagtgttctaaa 62485
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2081 tataagagcgtttagatcacta 2102 |||||||||||||||||||||| Sbjct: 11932 tataagagcgtttagatcacta 11911
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein (rga2) gene, partial cds Length = 1436 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial cds Length = 1435 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 209 atataagaccttttagatcact-aagtagtgatctaaa 245
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial cds Length = 1436 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 209 atataagaccttttagatcact-aagtagtgatctaaa 245
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial cds Length = 1437 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 210 atataagaccttttagatcact-aagtagtgatctaaa 246
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box transcription factor BM5A (VRN-H1) gene, complete cds Length = 12360 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| |||||||| || |||||||||||| |||||| Sbjct: 11497 atataaaagcgtttaaattactaaagtagtgttctaaa 11534
>gb|AF277252.1|AF277252 Australopyrum pectinatum isolate H6771 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1048 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2110 gatctaaacactcttatatttcattatggacggagtat 2147 ||||||||| |||||||||||| |||| || ||||||| Sbjct: 840 gatctaaacgctcttatatttctttatagagggagtat 803
>gb|AF277251.1|AF277251 Australopyrum retrofractum isolate H6723 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1061 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2110 gatctaaacactcttatatttcattatggacggagtat 2147 ||||||||| |||||||||||| |||| || ||||||| Sbjct: 840 gatctaaacgctcttatatttctttatagagggagtat 803
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||||| | ||||||||||| ||||||||||||||| Sbjct: 47560 atataagaccttttagatcact-aagtagtgatctaaa 47524
>emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 Score = 44.1 bits (22), Expect = 2.1 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 2092 ttagatcactaaagtagtgatctaaacactcttatatt 2129 |||||| |||||| ||||||||| |||||||||||||| Sbjct: 657 ttagataactaaactagtgatct-aacactcttatatt 621
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| |||||||| || |||||||||||| |||||| Sbjct: 855 atataaaagcgtttaaattactaaagtagtgttctaaa 892
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| |||||||| || |||||||||||| |||||| Sbjct: 902 atataaaagcgtttaaattactaaagtagtgttctaaa 939
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaaagtagtgatctaaa 2117 |||||| |||||||| || |||||||||||| |||||| Sbjct: 902 atataaaagcgtttaaattactaaagtagtgttctaaa 939
>ref|XM_840469.1| Trypanosoma brucei TREU927 chromosome 6 Length = 1812 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ttctggaggacatggtggatttggg 392 |||||||||||||||| |||||||| Sbjct: 1469 ttctggaggacatggtagatttggg 1493
>ref|XM_840464.1| Trypanosoma brucei TREU927 chromosome 6 Length = 1812 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ttctggaggacatggtggatttggg 392 |||||||||||||||| |||||||| Sbjct: 1469 ttctggaggacatggtagatttggg 1493
>emb|CT827954.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0814G11, complete sequence Length = 125762 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 67528 tttgaagttgaactaaaagta 67548
>ref|XM_777183.2| PREDICTED: Strongylocentrotus purpuratus similar to putative chromatin structure regulator (LOC576920), mRNA Length = 3981 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 ctcacagcagcagcagcaggt 332 ||||||||||||||||||||| Sbjct: 3657 ctcacagcagcagcagcaggt 3677
>ref|XM_001182515.1| PREDICTED: Strongylocentrotus purpuratus similar to putative chromatin structure regulator (LOC576920), mRNA Length = 3981 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 ctcacagcagcagcagcaggt 332 ||||||||||||||||||||| Sbjct: 3657 ctcacagcagcagcagcaggt 3677
>ref|NM_001072057.1| Oryza sativa (japonica cultivar-group) Os11g0103800 (Os11g0103800) mRNA, complete cds Length = 2618 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 1776 tttgaagttgaactaaaagta 1796
>gb|AC184099.2| Populus trichocarpa clone Pop1-93O20, complete sequence Length = 95025 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 636 gttgaatgaagatatgatgatgaag 660 |||||||||||| |||||||||||| Sbjct: 46340 gttgaatgaagaaatgatgatgaag 46364
>emb|CU041371.1| Wallaby DNA sequence from clone MEKBa-363O3, complete sequence Length = 116733 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1873 tggtccctgctcttgagggac 1893 ||||||||||||||||||||| Sbjct: 34819 tggtccctgctcttgagggac 34799
>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence Length = 140056 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ttctggaggacatggtggatttggg 392 |||||||||||||||| |||||||| Sbjct: 92274 ttctggaggacatggtagatttggg 92298 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ttctggaggacatggtggatttggg 392 |||||||||||||||| |||||||| Sbjct: 102151 ttctggaggacatggtagatttggg 102175
>gb|AC134823.41| Medicago truncatula clone mth2-20d18, complete sequence Length = 119033 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1513 tttgagaggcttcctaaaaca 1533 ||||||||||||||||||||| Sbjct: 45350 tttgagaggcttcctaaaaca 45330
>gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome 16, complete sequence Length = 129045 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 cacagagaaaaaaaggaaccc 58 ||||||||||||||||||||| Sbjct: 36592 cacagagaaaaaaaggaaccc 36612
>ref|XM_820331.1| Trypanosoma brucei TREU927 clone RPCI93-26G9 hypothetical protein (Tb927.6.4450) partial mRNA Length = 1812 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ttctggaggacatggtggatttggg 392 |||||||||||||||| |||||||| Sbjct: 1469 ttctggaggacatggtagatttggg 1493
>ref|XM_820336.1| Trypanosoma brucei TREU927 clone RPCI93-26G9 hypothetical protein (Tb927.6.4400) partial mRNA Length = 1812 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ttctggaggacatggtggatttggg 392 |||||||||||||||| |||||||| Sbjct: 1469 ttctggaggacatggtagatttggg 1493
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1278 cactgaagatgacccttatct 1298 ||||||||||||||||||||| Sbjct: 522746 cactgaagatgacccttatct 522766
>gb|AC119567.11| Homo sapiens X BAC RP11-416J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 79556 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2058 tgcatcaactctatattattt 2078 ||||||||||||||||||||| Sbjct: 55523 tgcatcaactctatattattt 55503
>gb|AC110588.4| Homo sapiens chromosome 15, clone CTD-2027G2, complete sequence Length = 138217 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 784 tatgagaaggtgctggggctagagg 808 |||||||||||| |||||||||||| Sbjct: 68704 tatgagaaggtggtggggctagagg 68728
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein (rga2) gene, partial cds Length = 1441 Score = 42.1 bits (21), Expect = 8.4 Identities = 36/40 (90%), Gaps = 2/40 (5%) Strand = Plus / Plus Query: 2080 atataagagcgtttagatcactaa--agtagtgatctaaa 2117 |||||||| | ||||||||||||| |||||||||||||| Sbjct: 210 atataagaccttttagatcactaagtagtagtgatctaaa 249
>emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23 on chromosome 3, complete sequence Length = 129215 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2122 cttatatttcattatggacggagta 2146 ||||||||||||| ||||||||||| Sbjct: 80952 cttatatttcattctggacggagta 80928
>dbj|AK035292.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530010N18 product:WDR9 PROTEIN, FORM B homolog [Homo sapiens], full insert sequence Length = 2511 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cacagagaaaaaaaggaaccc 58 ||||||||||||||||||||| Sbjct: 440 cacagagaaaaaaaggaaccc 420
>gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence Length = 179113 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 atctttgtcacactctctttc 425 ||||||||||||||||||||| Sbjct: 170962 atctttgtcacactctctttc 170982
>gb|AC091824.3| Homo sapiens chromosome 5 clone CTC-455O22, complete sequence Length = 171962 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 caagatttctttttggaggaa 239 ||||||||||||||||||||| Sbjct: 105398 caagatttctttttggaggaa 105378
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 caagatttctttttggaggaa 239 ||||||||||||||||||||| Sbjct: 20144838 caagatttctttttggaggaa 20144818
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 153639 tttgaagttgaactaaaagta 153659
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 17408153 ctgaagaagatgaagtagatc 17408173 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 28046846 ctgaagaagatgaagtagatc 28046826
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2094 agatcactaaagtagtgatct 2114 ||||||||||||||||||||| Sbjct: 483436 agatcactaaagtagtgatct 483456 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 23393493 ctgaagaagatgaagtagatc 23393473 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 29370937 ctgaagaagatgaagtagatc 29370917
>gb|AF463497.1| Spinacia oleracea lycopene epsilon-cyclase (lec) mRNA, complete cds Length = 2357 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gtccatcaggtccttccataa 287 ||||||||||||||||||||| Sbjct: 894 gtccatcaggtccttccataa 874
>emb|AL671934.4| Human DNA sequence from clone RP11-508H18 on chromosome 6 Contains part of a novel gene, complete sequence Length = 61294 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 702 actctccagggatgtccaggg 722 ||||||||||||||||||||| Sbjct: 12167 actctccagggatgtccaggg 12187
>emb|AL354858.16| Human DNA sequence from clone RP11-367P24 on chromosome 6 Contains STSs and GSSs, complete sequence Length = 155358 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2068 ctatattattttatataagag 2088 ||||||||||||||||||||| Sbjct: 51729 ctatattattttatataagag 51709
>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence Length = 180876 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cacagagaaaaaaaggaaccc 58 ||||||||||||||||||||| Sbjct: 119 cacagagaaaaaaaggaaccc 99
>ref|XM_643506.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (424.t00001) partial mRNA Length = 636 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 atgaagatatgatgatgaaga 661 ||||||||||||||||||||| Sbjct: 518 atgaagatatgatgatgaaga 538
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 35911 tttgaagttgaactaaaagta 35891
>gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, complete sequence Length = 188829 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 atctttgtcacactctctttc 425 ||||||||||||||||||||| Sbjct: 99795 atctttgtcacactctctttc 99815
>gb|AC154368.3| Mus musculus BAC clone RP23-137J22 from chromosome 13, complete sequence Length = 194222 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 80420 tttgaagttgaactaaaagta 80400
>gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosome 13, complete sequence Length = 216294 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gatttggaataaagaaggaga 620 ||||||||||||||||||||| Sbjct: 173600 gatttggaataaagaaggaga 173580
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 124338 ctgaagaagatgaagtagatc 124318
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 74717 ctgaagaagatgaagtagatc 74697
>emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 in linkage group 14, complete sequence Length = 201228 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 catccaaattacacaaaatct 499 ||||||||||||||||||||| Sbjct: 93829 catccaaattacacaaaatct 93809
>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14, complete sequence Length = 227326 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 catccaaattacacaaaatct 499 ||||||||||||||||||||| Sbjct: 81973 catccaaattacacaaaatct 81953
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2094 agatcactaaagtagtgatct 2114 ||||||||||||||||||||| Sbjct: 85600 agatcactaaagtagtgatct 85620
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 13390 ctgaagaagatgaagtagatc 13370
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 44341 ctgaagaagatgaagtagatc 44321
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 91777 ctgaagaagatgaagtagatc 91797
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 18998 ctgaagaagatgaagtagatc 19018
>emb|BX323465.7| Zebrafish DNA sequence from clone DKEYP-9C6 in linkage group 14, complete sequence Length = 174182 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 catccaaattacacaaaatct 499 ||||||||||||||||||||| Sbjct: 28260 catccaaattacacaaaatct 28240
>gb|BT023986.1| Zea mays clone EL01N0413D04 mRNA sequence Length = 1441 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tggaggagatcatctccctgcggag 185 ||||||||||| ||||||||||||| Sbjct: 153 tggaggagatcctctccctgcggag 177
>dbj|AK073546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K10, full insert sequence Length = 2621 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 1779 tttgaagttgaactaaaagta 1799
>emb|BX005006.10| Zebrafish DNA sequence from clone DKEY-47K14, complete sequence Length = 232594 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 catgctgtttacggtggctga 773 ||||||||||||||||||||| Sbjct: 152010 catgctgtttacggtggctga 151990
>dbj|AK072146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127P15, full insert sequence Length = 3101 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 647 tttgaagttgaactaaaagta 667
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1664 ctgaagaagatgaagtagatc 1684 ||||||||||||||||||||| Sbjct: 33859 ctgaagaagatgaagtagatc 33839
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2094 agatcactaaagtagtgatct 2114 ||||||||||||||||||||| Sbjct: 37348 agatcactaaagtagtgatct 37368
>ref|XM_317034.2| Anopheles gambiae str. PEST ENSANGP00000019277 (ENSANGG00000016788), partial mRNA Length = 2889 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 304 cagtcctactcacagcagcagcagc 328 ||||||||||| ||||||||||||| Sbjct: 2395 cagtcctactcccagcagcagcagc 2419
>gb|AY108951.1| Zea mays PCO116810 mRNA sequence Length = 468 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tggaggagatcatctccctgcggag 185 ||||||||||| ||||||||||||| Sbjct: 150 tggaggagatcctctccctgcggag 174
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1348 tttgaagttgaactaaaagta 1368 ||||||||||||||||||||| Sbjct: 151354 tttgaagttgaactaaaagta 151334
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152862 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 caagatttctttttggaggaa 239 ||||||||||||||||||||| Sbjct: 9072 caagatttctttttggaggaa 9052 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 357,993,100 Number of extensions: 19671315 Number of successful extensions: 262922 Number of sequences better than 10.0: 151 Number of HSP's gapped: 262901 Number of HSP's successfully gapped: 186 Length of query: 2188 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2165 Effective length of database: 18,503,978,556 Effective search space: 40061113573740 Effective search space used: 40061113573740 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
