ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68i21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050198.1| Oryza sativa (japonica cultivar-group) Os01g0635400 (Os01g0635400) mRNA, complete cds Length = 1407 Score = 973 bits (491), Expect = 0.0 Identities = 892/1025 (87%), Gaps = 3/1025 (0%) Strand = Plus / Plus Query: 50 caatggcgagctttaacgccgccggcgccgccccagccaaccctaaccctaacaaatccc 109 ||||||||||||||| ||||| ||||| || | |||||| ||||| ||||| |||| Sbjct: 54 caatggcgagctttaccgccggcggcggcggc---gccaacaacaaccccaacaagtccc 110 Query: 110 tcgaggtgaatccggcgcccggggactcggtttccagcctcagcttcagccccaaggcga 169 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111 tcgaggtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcga 170 Query: 170 accacctgattgccacctcctgggacaaccaggttcggtgctgggaggttcagcctggcg 229 ||||||| | ||||| || ||||||||||||||||| ||||||||| | |||||||| | Sbjct: 171 accacctcgtcgccacatcatgggacaaccaggttcgttgctgggagatccagcctggag 230 Query: 230 gccaatgccaggcgaaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtgga 289 |||||||||| |||||||| || || |||||||||||||| || ||||||| || |||| Sbjct: 231 gccaatgccaagcgaaggcctcgatctcgcacgatcagccggtgctgtgctcggcatgga 290 Query: 290 aggatgatgggactactgttttttcgggaggtagtgacaaaatggtgaagatgtggccgc 349 |||||||||||||||||||||||||||||||| |||| ||| | | ||||||||||||| Sbjct: 291 aggatgatgggactactgttttttcgggaggttgtgataaacagattaagatgtggccgc 350 Query: 350 tgctgtccggcgggcaggccacgaccttctcaggccatgaggcgtcggtcaaagaactcg 409 |||| ||||| |||||| ||| | || ||||| ||||| || |||||||||| || | Sbjct: 351 tgctctccggtgggcagcccatggttttatcagggcatgaagcaccggtcaaagagcttg 410 Query: 410 cttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggtact 469 | ||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 411 cctggataccacagatgaaccttcttgttagtgggagctgggacaagactctgaggtact 470 Query: 470 gggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgctatgctc 529 |||| |||| |||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 471 gggatgttcgacaacctcagccagcacatgttcagcaactacctgagcgctgttatgctc 530 Query: 530 tctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgttatcttca 589 ||||||||||||||||||| |||| ||| || ||||||||||| || || | |||||| Sbjct: 531 tctcacttagttatcctctcatggtggttggcactgctgatcgaaatgtaatagtcttca 590 Query: 590 atctgcagaatccacaggctgaattcaagaggatcgtgtcacctttgaaattccagacaa 649 || ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct: 591 atatgcagaatccacaggctgaattcaagaggattgtgtcacctttaaaactccagacaa 650 Query: 650 ggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaatagaaggacgcg 709 ||||| |||| || || |||||||| ||||| || |||||||||| ||||||||||| | Sbjct: 651 ggtgtcttgctgcatttcctgatcagcaagggtttctggttggatcgatagaaggacgag 710 Query: 710 ttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaaatgtcacc 769 |||||||||||||||| ||||| | | ||| | || || || ||||| |||||||||| Sbjct: 711 ttggtgttcatcatgttgatgatggtcaacaagggaaaaactttacatttaaatgtcacc 770 Query: 770 gtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgcaccatacgt 829 |||| |||| ||| |||||| |||||||| | |||||||||| |||||||||||||| | Sbjct: 771 gtgatggcaatgacatatacgctgttaacgcattgaactttcaccctgtgcaccatactt 830 Query: 830 ttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaagac 889 |||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 831 ttgccacttcgggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggc 890 Query: 890 tgaaggcttttagcaagtgcccatcacccatcacgtgcagcacattcaatcaggatggct 949 | |||||||| | ||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 891 ttaaggctttcaataagtgtccgtcacccatcacatgcagtacattcaatcaggatggct 950 Query: 950 caatctttgcttatgcggtatgttatgattggagcaagggtgctgagaagcataatcctt 1009 |||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 951 caatatttgcttatgcggtatgctatgattggagcaagggtgccgagaagcacaatcctt 1010 Query: 1010 ctactgcaaagacaaatatctttctgcatagcgtgcaggaatctgatgtcaaaggaaagc 1069 |||||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 1011 ctactgcaaaaacaaatatctttctccatagtgtccaggaatctgaggtcaaaggaaagc 1070 Query: 1070 cccgt 1074 ||||| Sbjct: 1071 cccgt 1075
>dbj|AK102655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101G11, full insert sequence Length = 1410 Score = 965 bits (487), Expect = 0.0 Identities = 891/1025 (86%), Gaps = 3/1025 (0%) Strand = Plus / Plus Query: 50 caatggcgagctttaacgccgccggcgccgccccagccaaccctaaccctaacaaatccc 109 ||||||||||||||| ||||| ||||| || | |||||| ||||| ||||| |||| Sbjct: 55 caatggcgagctttaccgccggcggcggcggc---gccaacaacaaccccaacaagtccc 111 Query: 110 tcgaggtgaatccggcgcccggggactcggtttccagcctcagcttcagccccaaggcga 169 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112 tcgaggtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcga 171 Query: 170 accacctgattgccacctcctgggacaaccaggttcggtgctgggaggttcagcctggcg 229 ||||||| | ||||| || ||||||||||||||||| ||||||||| | |||||||| | Sbjct: 172 accacctcgtcgccacatcatgggacaaccaggttcgttgctgggagatccagcctggag 231 Query: 230 gccaatgccaggcgaaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtgga 289 |||||||||| |||||||| || || |||||||||||||| || ||||||| || |||| Sbjct: 232 gccaatgccaagcgaaggcctcgatctcgcacgatcagccggtgctgtgctcggcatgga 291 Query: 290 aggatgatgggactactgttttttcgggaggtagtgacaaaatggtgaagatgtggccgc 349 |||||||||||||||||||||||||||||||| |||| ||| | | ||||||||||||| Sbjct: 292 aggatgatgggactactgttttttcgggaggttgtgataaacagattaagatgtggccgc 351 Query: 350 tgctgtccggcgggcaggccacgaccttctcaggccatgaggcgtcggtcaaagaactcg 409 |||| ||||| |||||| ||| | || ||||| ||||| || |||||||||| || | Sbjct: 352 tgctctccggtgggcagcccatggttttatcagggcatgaagcaccggtcaaagagcttg 411 Query: 410 cttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggtact 469 | ||||| ||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 412 cctggataacacagatgaaccttcttgttagtgggagctgggacaagactctgaggtact 471 Query: 470 gggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgctatgctc 529 |||| |||| |||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 472 gggatgttcgacaacctcagccagcacatgttcagcaactacctgagcgctgttatgctc 531 Query: 530 tctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgttatcttca 589 ||||||||||||||||||| |||| ||| || ||||||||||| || || | |||||| Sbjct: 532 tctcacttagttatcctctcatggtggttggcactgctgatcgaaatgtaatagtcttca 591 Query: 590 atctgcagaatccacaggctgaattcaagaggatcgtgtcacctttgaaattccagacaa 649 || ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct: 592 atatgcagaatccacaggctgaattcaagaggattgtgtcacctttaaaactccagacaa 651 Query: 650 ggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaatagaaggacgcg 709 ||||| |||| || || |||||||| ||||| || |||||||||| ||||||||||| | Sbjct: 652 ggtgtcttgctgcatttcctgatcagcaagggtttctggttggatcgatagaaggacgag 711 Query: 710 ttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaaatgtcacc 769 |||||||||||||||| ||||| | | ||| | || || || ||||| |||||||||| Sbjct: 712 ttggtgttcatcatgttgatgatggtcaacaagggaaaaactttacatttaaatgtcacc 771 Query: 770 gtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgcaccatacgt 829 |||| |||| ||| |||||| |||||||| | |||||||||| |||||||||||||| | Sbjct: 772 gtgatggcaatgacatatacgctgttaacgcattgaactttcaccctgtgcaccatactt 831 Query: 830 ttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaagac 889 |||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 832 ttgccacttcgggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggc 891 Query: 890 tgaaggcttttagcaagtgcccatcacccatcacgtgcagcacattcaatcaggatggct 949 | |||||||| | ||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 892 ttaaggctttcaataagtgtccgtcacccatcacatgcagtacattcaatcaggatggct 951 Query: 950 caatctttgcttatgcggtatgttatgattggagcaagggtgctgagaagcataatcctt 1009 |||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 952 caatatttgcttatgcggtatgctatgattggagcaagggtgccgagaagcacaatcctt 1011 Query: 1010 ctactgcaaagacaaatatctttctgcatagcgtgcaggaatctgatgtcaaaggaaagc 1069 |||||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 1012 ctactgcaaaaacaaatatctttctccatagtgtccaggaatctgaggtcaaaggaaagc 1071 Query: 1070 cccgt 1074 ||||| Sbjct: 1072 cccgt 1076
>dbj|AK111923.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B12, full insert sequence Length = 1313 Score = 950 bits (479), Expect = 0.0 Identities = 889/1025 (86%), Gaps = 3/1025 (0%) Strand = Plus / Plus Query: 50 caatggcgagctttaacgccgccggcgccgccccagccaaccctaaccctaacaaatccc 109 ||||||||||||||| ||||| ||||| || | |||||| ||||| ||||| |||| Sbjct: 71 caatggcgagctttaccgccggcggcggcggc---gccaacaacaaccccaacaagtccc 127 Query: 110 tcgaggtgaatccggcgcccggggactcggtttccagcctcagcttcagccccaaggcga 169 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 128 tcgaggtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcga 187 Query: 170 accacctgattgccacctcctgggacaaccaggttcggtgctgggaggttcagcctggcg 229 ||||||| | ||||| || ||||||||||||||||| ||||||||| | |||||||| | Sbjct: 188 accacctcgtcgccacatcatgggacaaccaggttcgttgctgggagatccagcctggag 247 Query: 230 gccaatgccaggcgaaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtgga 289 |||||||||| |||||||| || || |||||||||||||| || ||||||| || |||| Sbjct: 248 gccaatgccaagcgaaggcctcgatctcgcacgatcagccggtgctgtgctcggcatgga 307 Query: 290 aggatgatgggactactgttttttcgggaggtagtgacaaaatggtgaagatgtggccgc 349 |||||||||||||||||||||||||||||||| |||| ||| | | ||||||||||||| Sbjct: 308 aggatgatgggactactgttttttcgggaggttgtgataaacagattaagatgtggccgc 367 Query: 350 tgctgtccggcgggcaggccacgaccttctcaggccatgaggcgtcggtcaaagaactcg 409 |||| ||||| |||||| ||| | || ||||| ||||| || |||||||||| || | Sbjct: 368 tgctctccggtgggcagcccatggttttatcagggcatgaagcaccggtcaaagagcttg 427 Query: 410 cttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggtact 469 | ||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 428 cctggataccacagatgaaccttcttgttagtgggagctgggacaagactctgaggtact 487 Query: 470 gggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgctatgctc 529 |||| |||| |||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 488 gggatgttcgacaacctcagccagcacatgttcagcaactacctgagcgctgttatgctc 547 Query: 530 tctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgttatcttca 589 ||||||||||||||||||| |||| ||| || ||||||||||| || || | |||||| Sbjct: 548 tctcacttagttatcctctcatggtggttggcactgctgatcgaaatgtaatagtcttca 607 Query: 590 atctgcagaatccacaggctgaattcaagaggatcgtgtcacctttgaaattccagacaa 649 || ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct: 608 atatgcagaatccacaggctgaattcaagaggattgtgtcacctttaaaactccagacaa 667 Query: 650 ggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaatagaaggacgcg 709 ||||| |||| || || |||||||| ||||| || |||||||||| ||||||||||| | Sbjct: 668 ggtgtcttgctgcatttcctgatcagcaagggtttctggttggatcgatagaaggacgag 727 Query: 710 ttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaaatgtcacc 769 |||||||||||||||| ||||| | | ||| | || || || ||||| |||||||||| Sbjct: 728 ttggtgttcatcatgttgatgatggtcaacaagggaaaaactttacatttaaatgtcacc 787 Query: 770 gtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgcaccatacgt 829 |||| |||| ||| |||||| |||||||| | |||||||||| |||||||||||||| | Sbjct: 788 gtgatggcaatgacatatacgctgttaacgcattgaactttcaccctgtgcaccatactt 847 Query: 830 ttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaagac 889 |||| ||| | ||||||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 848 ttgccacttcgggctctgatggaggtttcaacctttgggacaaggacagtaagcaaaggc 907 Query: 890 tgaaggcttttagcaagtgcccatcacccatcacgtgcagcacattcaatcaggatggct 949 | |||||||| | ||||| || ||||||| ||| ||||| ||||||||||||| ||||| Sbjct: 908 ttaaggctttcaataagtgtccgtcacccaccacatgcagtacattcaatcagggtggct 967 Query: 950 caatctttgcttatgcggtatgttatgattggagcaagggtgctgagaagcataatcctt 1009 |||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 968 caatatttgcttatgcggtatgctatgattggagcaagggtgccgagaagcacaatcctt 1027 Query: 1010 ctactgcaaagacaaatatctttctgcatagcgtgcaggaatctgatgtcaaaggaaagc 1069 |||||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 1028 ctactgcaaaaacaaatatctttctccatagtgtccaggaatctgaggtcaaaggaaagc 1087 Query: 1070 cccgt 1074 ||||| Sbjct: 1088 cccgt 1092
>gb|AY109903.1| Zea mays CL12785_1 mRNA sequence Length = 635 Score = 289 bits (146), Expect = 1e-74 Identities = 335/402 (83%) Strand = Plus / Minus Query: 688 gttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaag 747 ||||| || |||||||| || |||||||||||||||||||| || ||| | ||| | Sbjct: 621 gttgggtctatagaaggncgagttggtgttcatcatgtggaagagtctcagcaaggnnnn 562 Query: 748 aatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaac 807 || ||||||| |||| ||| || |||| |||||||||| || ||| |||| ||||| Sbjct: 561 nnctttccattcaagtgtccccgcgatggcaatgatatatacgctattagctcgttgaac 502 Query: 808 tttcatcctgtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttttgg 867 |||||||||||||| ||| || |||||| |||||| ||||||| |||||||||||||| Sbjct: 501 tttcatcctgtgcatggtacattcgctactacaggctttgatggaagtttcaacttttgg 442 Query: 868 gacaaggacagtaaacaaagactgaaggcttttagcaagtgcccatcacccatcacgtgc 927 || ||||||||||| ||||| |||||||||| || | ||| |||| ||||| ||| Sbjct: 441 gataaggacagtaagcaaaggctgaaggcttataataggtgtccatnnnnnatcacatgc 382 Query: 928 agcacattcaatcaggatggctcaatctttgcttatgcggtatgttatgattggagcaag 987 ||| |||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 381 agcgcattcaatcatgatggctctatatttgcttacgcggtatgttatgattggagcaaa 322 Query: 988 ggtgctgagaagcataatccttctactgcaaagacaaatatctttctgcatagcgtgcag 1047 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||| Sbjct: 321 ggtgctgagaagcataatccttctactgcaaagacaaatatatttctacatagtgcccag 262 Query: 1048 gaatctgatgtcaaaggaaagccccgtactggaaaaaagtag 1089 || ||||| || |||||||| ||||| ||||||| |||||| Sbjct: 261 gattctgacgtgaaaggaaaaccccgcgctggaaagaagtag 220
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 159 bits (80), Expect = 3e-35 Identities = 164/192 (85%) Strand = Plus / Plus Query: 275 tgtgctctgcgtggaaggatgatgggactactgttttttcgggaggtagtgacaaaatgg 334 ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 25463150 tgtgctcggcatggaaggatgatgggactactgttttttcgggaggttgtgataaacaga 25463209 Query: 335 tgaagatgtggccgctgctgtccggcgggcaggccacgaccttctcaggccatgaggcgt 394 | ||||||||||||||||| ||||| |||||| ||| | || ||||| ||||| || Sbjct: 25463210 ttaagatgtggccgctgctctccggtgggcagcccatggttttatcagggcatgaagcac 25463269 Query: 395 cggtcaaagaactcgcttggattccacagatgagtcttcttgtcagtgggagctgggata 454 |||||||||| || || ||||| |||||||||| |||||||| |||||||||||||| | Sbjct: 25463270 cggtcaaagagcttgcctggataccacagatgaaccttcttgttagtgggagctgggaca 25463329 Query: 455 agactctgaggt 466 |||||||||||| Sbjct: 25463330 agactctgaggt 25463341 Score = 133 bits (67), Expect = 2e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 113 aggtgaatccggcgcccggggactcggtttccagcctcagcttcagccccaaggcgaacc 172 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 25462750 aggtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcgaacc 25462809 Query: 173 acctgattgccacctcctgggacaaccaggt 203 |||| | ||||| || |||||||||||||| Sbjct: 25462810 acctcgtcgccacatcatgggacaaccaggt 25462840 Score = 129 bits (65), Expect = 3e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 463 aggtactgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgc 522 ||||||||||| |||| |||||| | ||||| |||||||||||||| || |||||||| Sbjct: 25463630 aggtactgggatgttcgacaacctcagccagcacatgttcagcaactacctgagcgctgt 25463689 Query: 523 tatgctctctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgtt 582 |||||||||||||||||||||||||| |||| ||| || ||||||||||| || || | Sbjct: 25463690 tatgctctctcacttagttatcctctcatggtggttggcactgctgatcgaaatgtaata 25463749 Query: 583 atcttcaatctgcagaatccacagg 607 |||||||| ||||||||||||||| Sbjct: 25463750 gtcttcaatatgcagaatccacagg 25463774 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 966 ggtatgttatgattggagcaagggtgctgagaagcataatccttctactgcaaagacaaa 1025 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 25469646 ggtatgctatgattggagcaagggtgccgagaagcacaatccttctactgcaaaaacaaa 25469705 Query: 1026 tatctttctgcatag 1040 ||||||||| ||||| Sbjct: 25469706 tatctttctccatag 25469720 Score = 101 bits (51), Expect = 6e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 817 gtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggac 876 ||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 25465811 gtgcaccatacttttgccacttcgggctctgatggaggtttcaacttttgggacaaggac 25465870 Query: 877 agtaaacaaag 887 ||||| ||||| Sbjct: 25465871 agtaagcaaag 25465881 Score = 91.7 bits (46), Expect = 6e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 603 acaggctgaattcaagaggatcgtgtcacctttgaaattccagacaaggtgtattgccgc 662 ||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| || Sbjct: 25464510 acaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgtcttgctgc 25464569 Query: 663 gttccctgatcaacaagg 680 || |||||||| ||||| Sbjct: 25464570 atttcctgatcagcaagg 25464587 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 904 aagtgcccatcacccatcacgtgcagcacattcaatcaggatggctcaatctttgcttat 963 ||||| || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 25468513 aagtgtccgtcacccatcacatgcagtacattcaatcaggatggctcaatatttgcttat 25468572 Query: 964 gcggta 969 |||||| Sbjct: 25468573 gcggta 25468578 Score = 87.7 bits (44), Expect = 9e-14 Identities = 110/132 (83%) Strand = Plus / Plus Query: 687 ggttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaa 746 ||||||||| ||||||||||| ||||||||||||||||| ||||| | | ||| | || Sbjct: 25465370 ggttggatcgatagaaggacgagttggtgttcatcatgttgatgatggtcaacaagggaa 25465429 Query: 747 gaatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaa 806 || || ||||| |||||||||||||| |||| ||| |||||| |||||||| | |||| Sbjct: 25465430 aaactttacatttaaatgtcaccgtgatggcaatgacatatacgctgttaacgcattgaa 25465489 Query: 807 ctttcatcctgt 818 |||||| ||||| Sbjct: 25465490 ctttcaccctgt 25465501 Score = 77.8 bits (39), Expect = 9e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 199 caggttcggtgctgggaggttcagcctggcggccaatgccaggcgaaggcgtctatttcg 258 |||||||| ||||||||| | |||||||| ||||||||||| |||||||| || || ||| Sbjct: 25462959 caggttcgttgctgggagatccagcctggaggccaatgccaagcgaaggcctcgatctcg 25463018 Query: 259 cacgatcagcc 269 ||||||||||| Sbjct: 25463019 cacgatcagcc 25463029 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1046 aggaatctgatgtcaaaggaaagccccgt 1074 |||||||||| |||||||||||||||||| Sbjct: 25470006 aggaatctgaggtcaaaggaaagccccgt 25470034 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 67 gccgccggcgccgccccagccaacccta 94 ||||||| |||||||||||||||||||| Sbjct: 25701350 gccgccgccgccgccccagccaacccta 25701377
>dbj|AP007251.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa234E14 Length = 34070 Score = 159 bits (80), Expect = 3e-35 Identities = 164/192 (85%) Strand = Plus / Plus Query: 275 tgtgctctgcgtggaaggatgatgggactactgttttttcgggaggtagtgacaaaatgg 334 ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 23420 tgtgctcggcatggaaggatgatgggactactgttttttcgggaggttgtgataaacaga 23479 Query: 335 tgaagatgtggccgctgctgtccggcgggcaggccacgaccttctcaggccatgaggcgt 394 | ||||||||||||||||| ||||| |||||| ||| | || ||||| ||||| || Sbjct: 23480 ttaagatgtggccgctgctctccggtgggcagcccatggttttatcagggcatgaagcac 23539 Query: 395 cggtcaaagaactcgcttggattccacagatgagtcttcttgtcagtgggagctgggata 454 |||||||||| || || ||||| |||||||||| |||||||| |||||||||||||| | Sbjct: 23540 cggtcaaagagcttgcctggataccacagatgaaccttcttgttagtgggagctgggaca 23599 Query: 455 agactctgaggt 466 |||||||||||| Sbjct: 23600 agactctgaggt 23611 Score = 133 bits (67), Expect = 2e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 113 aggtgaatccggcgcccggggactcggtttccagcctcagcttcagccccaaggcgaacc 172 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23020 aggtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcgaacc 23079 Query: 173 acctgattgccacctcctgggacaaccaggt 203 |||| | ||||| || |||||||||||||| Sbjct: 23080 acctcgtcgccacatcatgggacaaccaggt 23110 Score = 129 bits (65), Expect = 3e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 463 aggtactgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgc 522 ||||||||||| |||| |||||| | ||||| |||||||||||||| || |||||||| Sbjct: 23900 aggtactgggatgttcgacaacctcagccagcacatgttcagcaactacctgagcgctgt 23959 Query: 523 tatgctctctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgtt 582 |||||||||||||||||||||||||| |||| ||| || ||||||||||| || || | Sbjct: 23960 tatgctctctcacttagttatcctctcatggtggttggcactgctgatcgaaatgtaata 24019 Query: 583 atcttcaatctgcagaatccacagg 607 |||||||| ||||||||||||||| Sbjct: 24020 gtcttcaatatgcagaatccacagg 24044 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 966 ggtatgttatgattggagcaagggtgctgagaagcataatccttctactgcaaagacaaa 1025 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 29916 ggtatgctatgattggagcaagggtgccgagaagcacaatccttctactgcaaaaacaaa 29975 Query: 1026 tatctttctgcatag 1040 ||||||||| ||||| Sbjct: 29976 tatctttctccatag 29990 Score = 101 bits (51), Expect = 6e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 817 gtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggac 876 ||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 26081 gtgcaccatacttttgccacttcgggctctgatggaggtttcaacttttgggacaaggac 26140 Query: 877 agtaaacaaag 887 ||||| ||||| Sbjct: 26141 agtaagcaaag 26151 Score = 91.7 bits (46), Expect = 6e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 603 acaggctgaattcaagaggatcgtgtcacctttgaaattccagacaaggtgtattgccgc 662 ||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| || Sbjct: 24780 acaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgtcttgctgc 24839 Query: 663 gttccctgatcaacaagg 680 || |||||||| ||||| Sbjct: 24840 atttcctgatcagcaagg 24857 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 904 aagtgcccatcacccatcacgtgcagcacattcaatcaggatggctcaatctttgcttat 963 ||||| || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 28783 aagtgtccgtcacccatcacatgcagtacattcaatcaggatggctcaatatttgcttat 28842 Query: 964 gcggta 969 |||||| Sbjct: 28843 gcggta 28848 Score = 87.7 bits (44), Expect = 9e-14 Identities = 110/132 (83%) Strand = Plus / Plus Query: 687 ggttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaa 746 ||||||||| ||||||||||| ||||||||||||||||| ||||| | | ||| | || Sbjct: 25640 ggttggatcgatagaaggacgagttggtgttcatcatgttgatgatggtcaacaagggaa 25699 Query: 747 gaatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaa 806 || || ||||| |||||||||||||| |||| ||| |||||| |||||||| | |||| Sbjct: 25700 aaactttacatttaaatgtcaccgtgatggcaatgacatatacgctgttaacgcattgaa 25759 Query: 807 ctttcatcctgt 818 |||||| ||||| Sbjct: 25760 ctttcaccctgt 25771 Score = 77.8 bits (39), Expect = 9e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 199 caggttcggtgctgggaggttcagcctggcggccaatgccaggcgaaggcgtctatttcg 258 |||||||| ||||||||| | |||||||| ||||||||||| |||||||| || || ||| Sbjct: 23229 caggttcgttgctgggagatccagcctggaggccaatgccaagcgaaggcctcgatctcg 23288 Query: 259 cacgatcagcc 269 ||||||||||| Sbjct: 23289 cacgatcagcc 23299 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1046 aggaatctgatgtcaaaggaaagccccgt 1074 |||||||||| |||||||||||||||||| Sbjct: 30276 aggaatctgaggtcaaaggaaagccccgt 30304
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 159 bits (80), Expect = 3e-35 Identities = 164/192 (85%) Strand = Plus / Plus Query: 275 tgtgctctgcgtggaaggatgatgggactactgttttttcgggaggtagtgacaaaatgg 334 ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 153150 tgtgctcggcatggaaggatgatgggactactgttttttcgggaggttgtgataaacaga 153209 Query: 335 tgaagatgtggccgctgctgtccggcgggcaggccacgaccttctcaggccatgaggcgt 394 | ||||||||||||||||| ||||| |||||| ||| | || ||||| ||||| || Sbjct: 153210 ttaagatgtggccgctgctctccggtgggcagcccatggttttatcagggcatgaagcac 153269 Query: 395 cggtcaaagaactcgcttggattccacagatgagtcttcttgtcagtgggagctgggata 454 |||||||||| || || ||||| |||||||||| |||||||| |||||||||||||| | Sbjct: 153270 cggtcaaagagcttgcctggataccacagatgaaccttcttgttagtgggagctgggaca 153329 Query: 455 agactctgaggt 466 |||||||||||| Sbjct: 153330 agactctgaggt 153341 Score = 133 bits (67), Expect = 2e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 113 aggtgaatccggcgcccggggactcggtttccagcctcagcttcagccccaaggcgaacc 172 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 152750 aggtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcgaacc 152809 Query: 173 acctgattgccacctcctgggacaaccaggt 203 |||| | ||||| || |||||||||||||| Sbjct: 152810 acctcgtcgccacatcatgggacaaccaggt 152840 Score = 129 bits (65), Expect = 3e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 463 aggtactgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgc 522 ||||||||||| |||| |||||| | ||||| |||||||||||||| || |||||||| Sbjct: 153630 aggtactgggatgttcgacaacctcagccagcacatgttcagcaactacctgagcgctgt 153689 Query: 523 tatgctctctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgtt 582 |||||||||||||||||||||||||| |||| ||| || ||||||||||| || || | Sbjct: 153690 tatgctctctcacttagttatcctctcatggtggttggcactgctgatcgaaatgtaata 153749 Query: 583 atcttcaatctgcagaatccacagg 607 |||||||| ||||||||||||||| Sbjct: 153750 gtcttcaatatgcagaatccacagg 153774 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 966 ggtatgttatgattggagcaagggtgctgagaagcataatccttctactgcaaagacaaa 1025 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 159646 ggtatgctatgattggagcaagggtgccgagaagcacaatccttctactgcaaaaacaaa 159705 Query: 1026 tatctttctgcatag 1040 ||||||||| ||||| Sbjct: 159706 tatctttctccatag 159720 Score = 101 bits (51), Expect = 6e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 817 gtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggac 876 ||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 155811 gtgcaccatacttttgccacttcgggctctgatggaggtttcaacttttgggacaaggac 155870 Query: 877 agtaaacaaag 887 ||||| ||||| Sbjct: 155871 agtaagcaaag 155881 Score = 91.7 bits (46), Expect = 6e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 603 acaggctgaattcaagaggatcgtgtcacctttgaaattccagacaaggtgtattgccgc 662 ||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| || Sbjct: 154510 acaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgtcttgctgc 154569 Query: 663 gttccctgatcaacaagg 680 || |||||||| ||||| Sbjct: 154570 atttcctgatcagcaagg 154587 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 904 aagtgcccatcacccatcacgtgcagcacattcaatcaggatggctcaatctttgcttat 963 ||||| || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 158513 aagtgtccgtcacccatcacatgcagtacattcaatcaggatggctcaatatttgcttat 158572 Query: 964 gcggta 969 |||||| Sbjct: 158573 gcggta 158578 Score = 87.7 bits (44), Expect = 9e-14 Identities = 110/132 (83%) Strand = Plus / Plus Query: 687 ggttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaa 746 ||||||||| ||||||||||| ||||||||||||||||| ||||| | | ||| | || Sbjct: 155370 ggttggatcgatagaaggacgagttggtgttcatcatgttgatgatggtcaacaagggaa 155429 Query: 747 gaatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaa 806 || || ||||| |||||||||||||| |||| ||| |||||| |||||||| | |||| Sbjct: 155430 aaactttacatttaaatgtcaccgtgatggcaatgacatatacgctgttaacgcattgaa 155489 Query: 807 ctttcatcctgt 818 |||||| ||||| Sbjct: 155490 ctttcaccctgt 155501 Score = 77.8 bits (39), Expect = 9e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 199 caggttcggtgctgggaggttcagcctggcggccaatgccaggcgaaggcgtctatttcg 258 |||||||| ||||||||| | |||||||| ||||||||||| |||||||| || || ||| Sbjct: 152959 caggttcgttgctgggagatccagcctggaggccaatgccaagcgaaggcctcgatctcg 153018 Query: 259 cacgatcagcc 269 ||||||||||| Sbjct: 153019 cacgatcagcc 153029 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1046 aggaatctgatgtcaaaggaaagccccgt 1074 |||||||||| |||||||||||||||||| Sbjct: 160006 aggaatctgaggtcaaaggaaagccccgt 160034
>gb|DQ645452.1| Nicotiana benthamiana RNA export 1 (RAE1) mRNA, complete cds Length = 1044 Score = 137 bits (69), Expect = 1e-28 Identities = 237/293 (80%) Strand = Plus / Plus Query: 586 ttcaatctgcagaatccacaggctgaattcaagaggatcgtgtcacctttgaaattccag 645 ||||||||||||||||| ||| |||| ||||||||||| || || || || | ||| Sbjct: 532 ttcaatctgcagaatcctcagactgagttcaagaggattacctctcccttaaagtatcag 591 Query: 646 acaaggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaatagaagga 705 || ||||| | || || || |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 592 actcggtgtttagctgcctttcctgatcaacaaggtttcttggttggctcaattgaagga 651 Query: 706 cgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaaatgt 765 || |||||||| |||||| | ||||| || | ||||| || |||||||||||||| || Sbjct: 652 cgggttggtgtgcatcatcttgatgattcgcaacaaagtaaaaatttcacattcaagtgc 711 Query: 766 caccgtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgcaccat 825 ||| | ||||||| ||| || |||||||| ||||| |||||||| |||||||| || Sbjct: 712 cacagggagggcaatgaaatttactctgtcaactctctgaacttccatcctgttcatgga 771 Query: 826 acgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacag 878 || ||||| ||||| || |||||||| | ||||||||||||||||| ||||| Sbjct: 772 acatttgcaactgcgggatctgatggcgccttcaacttttgggacaaagacag 824 Score = 85.7 bits (43), Expect = 4e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 409 gcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggtac 468 |||||||| ||| |||||||||| | |||| || |||||||||||||||||||||||| Sbjct: 355 gcttggatcccagagatgagtctcttggtcacaggaagctgggataagactctgaggtac 414 Query: 469 tgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgctatgc 527 ||||| | | || || |||||||| ||||| || |||||||| |||||||||||||| Sbjct: 415 tgggatttgagacagccaaatccagcacatgtccaacaacttcctgagcgctgctatgc 473 Score = 77.8 bits (39), Expect = 9e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 925 tgcagcacattcaatcaggatggctcaatctttgcttatgcggtatgttatgattggagc 984 |||||| | ||||| || ||||||||||| | ||| |||||||| |||||||||||||| Sbjct: 871 tgcagcgctttcaaccatgatggctcaatatatgcatatgcggtttgttatgattggagt 930 Query: 985 aagggtgctgagaagcataatccttctactgcaaa 1019 |||||||| || || |||||||| || |||||||| Sbjct: 931 aagggtgcagaaaatcataatccatcaactgcaaa 965
>gb|BT017970.1| Zea mays clone EL01N0524B07.c mRNA sequence Length = 1422 Score = 135 bits (68), Expect = 4e-28 Identities = 389/496 (78%) Strand = Plus / Plus Query: 407 tcgcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggt 466 |||| |||||||| ||||||| ||||||||| || ||||||||||||||| | |||| Sbjct: 404 tcgcctggattcctcagatgaatcttcttgtatccggaagctgggataagactttaaggt 463 Query: 467 actgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctgctatg 526 ||||||| | ||||| | ||||| | ||| ||||||||||||| || || ||||||| Sbjct: 464 actgggatacaaggcaatcaaatcctgtgcatattcagcaacttcctgaacgttgctatg 523 Query: 527 ctctctcacttagttatcctctaatggcggtcggtactgctgatcgcaacgttgttatct 586 |||| | | | |||||| || ||| || || |||||||| || | ||||| ||| Sbjct: 524 ctcttactgtgaattatccccttatgattgttggaactgctgaccgtcatcttgttgtct 583 Query: 587 tcaatctgcagaatccacaggctgaattcaagaggatcgtgtcacctttgaaattccaga 646 ||||| |||||||||| ||| | || |||||| | ||| ||||| | |||| ||||| Sbjct: 584 tcaatttgcagaatcctcagacggagttcaagcgaatccaatcaccactaaaataccaga 643 Query: 647 caaggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaatagaaggac 706 || |||| |||| || ||||||||||||||||| || |||||||| |||||||||||| Sbjct: 644 cacggtgccttgctgcattccctgatcaacaagggtttttggttggttcaatagaaggaa 703 Query: 707 gcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaaatgtc 766 | ||||| ||||||||| | |||||| | | |||||||| || |||||||||||||| | Sbjct: 704 gagttggcgttcatcatatcgatgacgcacagcaaagcaaaaacttcacattcaaatgcc 763 Query: 767 accgtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgcaccata 826 || | || || | |||||||| |||||| || || || ||||| || |||| || || | Sbjct: 764 acagggaaggaaatgatatattctctgtcaattcactcaacttccaccctggtcatcaca 823 Query: 827 cgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaa 886 | ||||| ||||| || ||||| || | ||||||||| ||||| ||||| || || || | Sbjct: 824 catttgcaactgctggatctgacggtgctttcaacttctgggataaggatagcaagcaga 883 Query: 887 gactgaaggcttttag 902 | || ||||||||||| Sbjct: 884 ggctaaaggcttttag 899 Score = 54.0 bits (27), Expect = 0.001 Identities = 99/123 (80%) Strand = Plus / Plus Query: 244 aaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtggaaggatgatgggact 303 |||||||| ||||| || |||||||| || | ||||| || |||||||||||||| ||| Sbjct: 241 aaggcgtccatttctcatgatcagccggttctctgctcggcttggaaggatgatggaact 300 Query: 304 actgttttttcgggaggtagtgacaaaatggtgaagatgtggccgctgctgtccggcggg 363 ||||| || || ||||| ||||||| ||| || |||||||| || ||||| || ||| Sbjct: 301 actgtcttctctggaggctgtgacaagcaggtcaaaatgtggcctcttctgtcaggtggg 360 Query: 364 cag 366 ||| Sbjct: 361 cag 363 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 184 acctcctgggacaaccaggttcggtgctgggag 216 ||||||||||| |||||||| ||||||||||| Sbjct: 184 acctcctgggataaccaggtgaggtgctgggag 216
>ref|NM_001067654.1| Oryza sativa (japonica cultivar-group) Os08g0176800 (Os08g0176800) mRNA, complete cds Length = 1748 Score = 131 bits (66), Expect = 7e-27 Identities = 216/266 (81%) Strand = Plus / Plus Query: 637 aaattccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggttggatca 696 |||| |||||| |||||| |||| || ||||| |||||||||||||| ||||| || || Sbjct: 778 aaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggtgggttcc 837 Query: 697 atagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcaca 756 ||||||||| | |||||||| |||||| | |||||||| | |||||||| |||||||| Sbjct: 838 atagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacg 897 Query: 757 ttcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaactttcatcct 816 |||||||||||| | || || | |||||| | |||||| || || || || ||||| || Sbjct: 898 ttcaaatgtcacagggaagggaatgatattttctctgtcaattcactcaattttcaccca 957 Query: 817 gtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggac 876 || || || |||||||| ||||| || || ||||| | || || || ||||| ||||| Sbjct: 958 gttcatcacacgtttgcaactgctggatcagatggcgcatttaatttctgggataaggat 1017 Query: 877 agtaaacaaagactgaaggcttttag 902 || ||||||||||||||||||||||| Sbjct: 1018 agcaaacaaagactgaaggcttttag 1043 Score = 101 bits (51), Expect = 6e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 407 tcgcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggt 466 ||||||||||||| || |||| |||||||||| ||| ||||||||||||||||| |||| Sbjct: 548 tcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggt 607 Query: 467 actgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctg 521 | ||||||| ||||| | ||||| | |||||||||||||||||| |||||||| Sbjct: 608 attgggacacaaggcaatcaaatcctgtccatgttcagcaacttcctgagcgctg 662 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 244 aaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtggaaggatgatgggact 303 ||||| ||||| ||||| || ||||||||| | || || || |||||||||||||| ||| Sbjct: 385 aaggcatctatatcgcatgaccagccagtcctctgttcagcttggaaggatgatggaact 444 Query: 304 actgt 308 ||||| Sbjct: 445 actgt 449 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 tcctgggacaaccaggttcggtgctgggag 216 |||||||| |||||||| |||||||||||| Sbjct: 331 tcctgggataaccaggtgcggtgctgggag 360
>dbj|AK111670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C15, full insert sequence Length = 1750 Score = 131 bits (66), Expect = 7e-27 Identities = 216/266 (81%) Strand = Plus / Plus Query: 637 aaattccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggttggatca 696 |||| |||||| |||||| |||| || ||||| |||||||||||||| ||||| || || Sbjct: 778 aaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggtgggttcc 837 Query: 697 atagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcaca 756 ||||||||| | |||||||| |||||| | |||||||| | |||||||| |||||||| Sbjct: 838 atagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacg 897 Query: 757 ttcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaactttcatcct 816 |||||||||||| | || || | |||||| | |||||| || || || || ||||| || Sbjct: 898 ttcaaatgtcacagggaagggaatgatattttctctgtcaattcactcaattttcaccca 957 Query: 817 gtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggac 876 || || || |||||||| ||||| || || ||||| | || || || ||||| ||||| Sbjct: 958 gttcatcacacgtttgcaactgctggatcagatggcgcatttaatttctgggataaggat 1017 Query: 877 agtaaacaaagactgaaggcttttag 902 || ||||||||||||||||||||||| Sbjct: 1018 agcaaacaaagactgaaggcttttag 1043 Score = 101 bits (51), Expect = 6e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 407 tcgcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggt 466 ||||||||||||| || |||| |||||||||| ||| ||||||||||||||||| |||| Sbjct: 548 tcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggt 607 Query: 467 actgggacattcggcaacctaatccagcccatgttcagcaacttccagagcgctg 521 | ||||||| ||||| | ||||| | |||||||||||||||||| |||||||| Sbjct: 608 attgggacacaaggcaatcaaatcctgtccatgttcagcaacttcctgagcgctg 662 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 244 aaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtggaaggatgatgggact 303 ||||| ||||| ||||| || ||||||||| | || || || |||||||||||||| ||| Sbjct: 385 aaggcatctatatcgcatgaccagccagtcctctgttcagcttggaaggatgatggaact 444 Query: 304 actgt 308 ||||| Sbjct: 445 actgt 449 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 tcctgggacaaccaggttcggtgctgggag 216 |||||||| |||||||| |||||||||||| Sbjct: 331 tcctgggataaccaggtgcggtgctgggag 360
>gb|AY106512.1| Zea mays PCO062228 mRNA sequence Length = 1608 Score = 131 bits (66), Expect = 7e-27 Identities = 360/458 (78%) Strand = Plus / Plus Query: 445 agctgggataagactctgaggtactgggacattcggcaacctaatccagcccatgttcag 504 ||||||||||||||| | ||||||||||| | ||||| | ||||| | ||| ||||| Sbjct: 620 agctgggataagactttaaggtactgggatacaaggcaatcaaatcctgtgcatattcag 679 Query: 505 caacttccagagcgctgctatgctctctcacttagttatcctctaatggcggtcggtact 564 |||||||| || || ||||||||||| | | | |||||| || ||| || || ||| Sbjct: 680 caacttcctgaacgttgctatgctcttactgtgaattatccccttatgattgttggaact 739 Query: 565 gctgatcgcaacgttgttatcttcaatctgcagaatccacaggctgaattcaagaggatc 624 ||||| || | ||||| |||||||| |||||||||| ||| | || |||||| | ||| Sbjct: 740 gctgaccgtcatcttgttgtcttcaatttgcagaatcctcagacggagttcaagcgaatc 799 Query: 625 gtgtcacctttgaaattccagacaaggtgtattgccgcgttccctgatcaacaaggattc 684 ||||| | |||| ||||||| |||| |||| || ||||||||||||||||| || Sbjct: 800 caatcaccactaaaataccagacacggtgccttgctgcattccctgatcaacaagggttt 859 Query: 685 ttggttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagc 744 |||||||| |||||||||||| | ||||| ||||||||| | |||||| | | |||||| Sbjct: 860 ttggttggttcaatagaaggaagagttggcgttcatcatatcgatgacgcacagcaaagc 919 Query: 745 aagaatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctg 804 || || |||||||||||||| ||| | || || | |||||||| |||||| || || || Sbjct: 920 aaaaacttcacattcaaatgccacagggaaggaaatgatatattctctgtcaattcactc 979 Query: 805 aactttcatcctgtgcaccatacgtttgctactgcaggctctgatggaggtttcaacttt 864 ||||| || ||||| || || || ||||| ||||| || ||||| || | ||||||||| Sbjct: 980 aacttccaccctgtccatcacacatttgcaactgctggatctgacggtgctttcaacttc 1039 Query: 865 tgggacaaggacagtaaacaaagactgaaggcttttag 902 ||||| ||||| || || || || || ||||||||||| Sbjct: 1040 tgggataaggatagcaagcagaggctaaaggcttttag 1077 Score = 54.0 bits (27), Expect = 0.001 Identities = 99/123 (80%) Strand = Plus / Plus Query: 244 aaggcgtctatttcgcacgatcagccagtcttgtgctctgcgtggaaggatgatgggact 303 |||||||| ||||| || |||||||| || | ||||| || |||||||||||||| ||| Sbjct: 419 aaggcgtccatttctcatgatcagccggttctctgctcggcttggaaggatgatggaact 478 Query: 304 actgttttttcgggaggtagtgacaaaatggtgaagatgtggccgctgctgtccggcggg 363 ||||| || || ||||| ||||||| ||| || |||||||| || ||||| || ||| Sbjct: 479 actgtcttctctggaggctgtgacaagcaggtcaaaatgtggcctcttctgtcaggtggg 538 Query: 364 cag 366 ||| Sbjct: 539 cag 541 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 184 acctcctgggacaaccaggttcggtgctgggag 216 ||||||||||| |||||||| ||||||||||| Sbjct: 362 acctcctgggataaccaggtgaggtgctgggag 394
>gb|BT025241.1| Arabidopsis thaliana At1g80670 mRNA, complete cds Length = 1050 Score = 109 bits (55), Expect = 2e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 642 ccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaataga 701 |||||| |||||| || | || ||||||||||| ||||| || |||||||| ||||| || Sbjct: 594 ccagacgaggtgtgttactgccttccctgatcagcaaggttttttggttggttcaattga 653 Query: 702 aggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaa 761 || || ||||||||||||||| ||||||| ||| | || ||||| || ||||||||||| Sbjct: 654 ggggcgggttggtgttcatcatctggatgattctcaacagagcaaaaacttcacattcaa 713 Query: 762 atgtcaccgtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgca 821 ||| ||| | || || | ||||||||| ||||| ||||| ||||| || || || || || Sbjct: 714 atgccacagagatggaaatgatatatattctgtcaactctctgaatttccacccggtaca 773 Query: 822 ccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaa 881 || ||||| ||||| || || ||||| | |||||| || |||||||| || ||||| Sbjct: 774 tggcacttttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaa 833 Query: 882 acaaagactgaaggc 896 ||||||||| ||||| Sbjct: 834 acaaagactcaaggc 848
>ref|NM_106715.3| Arabidopsis thaliana nucleotide binding (AT1G80670) mRNA, complete cds Length = 1407 Score = 109 bits (55), Expect = 2e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 642 ccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaataga 701 |||||| |||||| || | || ||||||||||| ||||| || |||||||| ||||| || Sbjct: 718 ccagacgaggtgtgttactgccttccctgatcagcaaggttttttggttggttcaattga 777 Query: 702 aggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaa 761 || || ||||||||||||||| ||||||| ||| | || ||||| || ||||||||||| Sbjct: 778 ggggcgggttggtgttcatcatctggatgattctcaacagagcaaaaacttcacattcaa 837 Query: 762 atgtcaccgtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgca 821 ||| ||| | || || | ||||||||| ||||| ||||| ||||| || || || || || Sbjct: 838 atgccacagagatggaaatgatatatattctgtcaactctctgaatttccacccggtaca 897 Query: 822 ccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaa 881 || ||||| ||||| || || ||||| | |||||| || |||||||| || ||||| Sbjct: 898 tggcacttttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaa 957 Query: 882 acaaagactgaaggc 896 ||||||||| ||||| Sbjct: 958 acaaagactcaaggc 972
>gb|AY087683.1| Arabidopsis thaliana clone 37635 mRNA, complete sequence Length = 1295 Score = 109 bits (55), Expect = 2e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 642 ccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggttggatcaataga 701 |||||| |||||| || | || ||||||||||| ||||| || |||||||| ||||| || Sbjct: 687 ccagacgaggtgtgttactgccttccctgatcagcaaggttttttggttggttcaattga 746 Query: 702 aggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaa 761 || || ||||||||||||||| ||||||| ||| | || ||||| || ||||||||||| Sbjct: 747 ggggcgggttggtgttcatcatctggatgattctcaacagagcaaaaacttcacattcaa 806 Query: 762 atgtcaccgtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgca 821 ||| ||| | || || | ||||||||| ||||| ||||| ||||| || || || || || Sbjct: 807 atgccacagagatggaaatgatatatattctgtcaactctctgaatttccacccggtaca 866 Query: 822 ccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaa 881 || ||||| ||||| || || ||||| | |||||| || |||||||| || ||||| Sbjct: 867 tggcacttttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaa 926 Query: 882 acaaagactgaaggc 896 ||||||||| ||||| Sbjct: 927 acaaagactcaaggc 941
>emb|BX817345.1|CNS0ACJR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL17ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 581 Score = 95.6 bits (48), Expect = 4e-16 Identities = 205/256 (80%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 642 ccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggttg-gatcaatag 700 |||||| |||||| || | || ||||||||||| ||||| || ||||||| | ||||| | Sbjct: 127 ccagacgaggtgtgttactgccttccctgatcagcaaggttttttggttgtgttcaattg 186 Query: 701 aaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcacattca 760 | || || ||||||||||||||| ||||||| ||| | || ||||| || |||||||||| Sbjct: 187 aggggcgggttggtgttcatcatctggatgattctcaacagagcaaaaacttcacattca 246 Query: 761 aatgtcaccgtgagggcactgatatatactctgttaactcgctgaactttcatcctgtgc 820 |||| ||| | || || | ||||||||| ||||| ||||| ||||| || || || || | Sbjct: 247 aatgccacagagatggaaatgatatatattctgtcaactctctgaatttccacccggtac 306 Query: 821 accatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagta 880 | || ||||| ||||| || || ||||| | |||||| || |||||||| || |||| Sbjct: 307 atggcacttttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagta 366 Query: 881 aacaaagactgaaggc 896 |||||||||| ||||| Sbjct: 367 aacaaagactcaaggc 382
>dbj|AK110703.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-C04, full insert sequence Length = 496 Score = 91.7 bits (46), Expect = 6e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 603 acaggctgaattcaagaggatcgtgtcacctttgaaattccagacaaggtgtattgccgc 662 ||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| || Sbjct: 287 acaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgtcttgctgc 346 Query: 663 gttccctgatcaacaagg 680 || |||||||| ||||| Sbjct: 347 atttcctgatcagcaagg 364
>gb|AC011713.2|F23A5 Arabidopsis thaliana chromosome 1 BAC F23A5 sequence, complete sequence Length = 109694 Score = 71.9 bits (36), Expect = 5e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 687 ggttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaa 746 |||||| ||||| || || || ||||||||||||||| ||||||| ||| | || ||||| Sbjct: 5641 ggttggttcaattgaggggcgggttggtgttcatcatctggatgattctcaacagagcaa 5582 Query: 747 gaatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaa 806 || |||||||||||||| ||| | || || | ||||||||| ||||| ||||| ||||| Sbjct: 5581 aaacttcacattcaaatgccacagagatggaaatgatatatattctgtcaactctctgaa 5522 Score = 46.1 bits (23), Expect = 0.31 Identities = 56/67 (83%) Strand = Plus / Minus Query: 829 tttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaaga 888 ||||| ||||| || || ||||| | |||||| || |||||||| || |||||||||||| Sbjct: 5394 tttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaaacaaaga 5335 Query: 889 ctgaagg 895 || |||| Sbjct: 5334 ctcaagg 5328
>gb|U53501.1|ATU53501 Arabidopsis thaliana chromosome I cosmid g8261 DNA (cytosine-5-) methyltransferase, zinc finger protein 1, nucleoporin 98, poly A+ RNA export protein, plasma membrane ATPase 2, and serine/threonine protein kinase genes, complete cds Length = 37570 Score = 71.9 bits (36), Expect = 5e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 687 ggttggatcaatagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaa 746 |||||| ||||| || || || ||||||||||||||| ||||||| ||| | || ||||| Sbjct: 25617 ggttggttcaattgaggggcgggttggtgttcatcatctggatgattctcaacagagcaa 25676 Query: 747 gaatttcacattcaaatgtcaccgtgagggcactgatatatactctgttaactcgctgaa 806 || |||||||||||||| ||| | || || | ||||||||| ||||| ||||| ||||| Sbjct: 25677 aaacttcacattcaaatgccacagagatggaaatgatatatattctgtcaactctctgaa 25736 Score = 46.1 bits (23), Expect = 0.31 Identities = 56/67 (83%) Strand = Plus / Plus Query: 829 tttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaaga 888 ||||| ||||| || || ||||| | |||||| || |||||||| || |||||||||||| Sbjct: 25864 tttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaaacaaaga 25923 Query: 889 ctgaagg 895 || |||| Sbjct: 25924 ctcaagg 25930
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 63.9 bits (32), Expect = 1e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 697 atagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcaca 756 ||||||||| | |||||||| |||||| | |||||||| | |||||||| |||||||| Sbjct: 4493435 atagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacg 4493376 Query: 757 ttcaaatgtcac 768 |||||||||||| Sbjct: 4493375 ttcaaatgtcac 4493364 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 407 tcgcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggt 466 ||||||||||||| || |||| |||||||||| ||| ||||||||||||||||| |||| Sbjct: 4494729 tcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggt 4494670 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Minus Query: 637 aaattccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggt 689 |||| |||||| |||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 4493912 aaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggt 4493860 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 495 ccatgttcagcaacttccagagcgctg 521 |||||||||||||||||| |||||||| Sbjct: 4494175 ccatgttcagcaacttcctgagcgctg 4494149
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 63.9 bits (32), Expect = 1e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 697 atagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcaca 756 ||||||||| | |||||||| |||||| | |||||||| | |||||||| |||||||| Sbjct: 17283 atagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacg 17224 Query: 757 ttcaaatgtcac 768 |||||||||||| Sbjct: 17223 ttcaaatgtcac 17212 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 407 tcgcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggt 466 ||||||||||||| || |||| |||||||||| ||| ||||||||||||||||| |||| Sbjct: 18577 tcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggt 18518 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Minus Query: 637 aaattccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggt 689 |||| |||||| |||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 17760 aaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggt 17708 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 495 ccatgttcagcaacttccagagcgctg 521 |||||||||||||||||| |||||||| Sbjct: 18023 ccatgttcagcaacttcctgagcgctg 17997
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 63.9 bits (32), Expect = 1e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 697 atagaaggacgcgttggtgttcatcatgtggatgactctaatcaaagcaagaatttcaca 756 ||||||||| | |||||||| |||||| | |||||||| | |||||||| |||||||| Sbjct: 59325 atagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacg 59266 Query: 757 ttcaaatgtcac 768 |||||||||||| Sbjct: 59265 ttcaaatgtcac 59254 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 407 tcgcttggattccacagatgagtcttcttgtcagtgggagctgggataagactctgaggt 466 ||||||||||||| || |||| |||||||||| ||| ||||||||||||||||| |||| Sbjct: 60619 tcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggt 60560 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Minus Query: 637 aaattccagacaaggtgtattgccgcgttccctgatcaacaaggattcttggt 689 |||| |||||| |||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 59802 aaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggt 59750 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 495 ccatgttcagcaacttccagagcgctg 521 |||||||||||||||||| |||||||| Sbjct: 60065 ccatgttcagcaacttcctgagcgctg 60039
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 603 acaggctgaattcaagaggatcgtgtcacctttgaaattccagacaaggtgtattgccgc 662 ||||| |||||||||||| ||| | |||||||| || | |||||||||||| | || || Sbjct: 44404 acaggttgaattcaagagaatcatttcacctttaaagtatcagacaaggtgtctcgctgc 44345 Query: 663 gttccctgatcaacaaggattcttggt 689 |||||||| |||||||| |||||||| Sbjct: 44344 attccctgaccaacaaggtttcttggt 44318 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 154 ttcagccccaaggcgaaccacctgattgccacctcctgggacaaccaggttcggtgctgg 213 ||||||||||| || |||| ||| | ||||| |||||||||||||||||||| |||||| Sbjct: 45913 ttcagccccaaagctaacctcctcgtcgccacttcctgggacaaccaggttcgatgctgg 45854 Query: 214 ga 215 || Sbjct: 45853 ga 45852 Score = 50.1 bits (25), Expect = 0.020 Identities = 40/45 (88%) Strand = Plus / Minus Query: 687 ggttggatcaatagaaggacgcgttggtgttcatcatgtggatga 731 ||||||||||||||||||| | ||||| || |||||| ||||||| Sbjct: 43828 ggttggatcaatagaaggaagagttggggtacatcatttggatga 43784 Score = 42.1 bits (21), Expect = 4.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 820 caccatacgtttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagt 879 ||||| || ||||| ||||| || |||||||| | ||| || ||||||||||| || ||| Sbjct: 43115 caccacacctttgcaactgctggttctgatggtgcttttaatttttgggacaaagatagt 43056 Query: 880 aaaca 884 ||||| Sbjct: 43055 aaaca 43051
>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete sequence Length = 79881 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 829 tttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaaga 888 ||||| ||||| ||||||||||| | |||||| || | ||||||||| |||||||||||| Sbjct: 12775 tttgccactgctggctctgatggtgctttcaatttctaggacaaggatagtaaacaaaga 12716 Query: 889 ct 890 || Sbjct: 12715 ct 12714
>emb|X73676.1|ATAHA9 A.thaliana aha9 gene Length = 6110 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 713 gtgttcatcatgtggatgactctaatcaaagcaagaatttcacattcaaatgtcaccgtg 772 ||||||||||| ||||||| ||| | || ||||| || |||||||||||||| ||| | | Sbjct: 466 gtgttcatcatctggatgattctcaacagagcaaaaacttcacattcaaatgccacagag 525 Query: 773 agggcactgatatatactctgttaactcgctgaa 806 | || | ||||||||| ||||| ||||| ||||| Sbjct: 526 atggaaatgatatatattctgtcaactctctgaa 559 Score = 46.1 bits (23), Expect = 0.31 Identities = 56/67 (83%) Strand = Plus / Plus Query: 829 tttgctactgcaggctctgatggaggtttcaacttttgggacaaggacagtaaacaaaga 888 ||||| ||||| || || ||||| | |||||| || |||||||| || |||||||||||| Sbjct: 688 tttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaaacaaaga 747 Query: 889 ctgaagg 895 || |||| Sbjct: 748 ctcaagg 754
>gb|AF069392.3|AF069392 Vibrio parahaemolyticus polar flagellar and chemotaxis genes, complete cds; and unknown genes Length = 39101 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 558 cggtactgctgatcgcaacgttgtt 582 ||||||||||||||||||||||||| Sbjct: 26015 cggtactgctgatcgcaacgttgtt 26039
>gb|BC060072.1| Mus musculus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:73449 IMAGE:5718934), complete cds Length = 4222 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 571 gggagctgggataagactctgaagttctggga 602
>dbj|AK146058.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530027N11 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence Length = 1648 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 669 gggagctgggataagactctgaagttctggga 700
>gb|BC059051.1| Mus musculus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:69835 IMAGE:6818771), complete cds Length = 1625 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 626 gggagctgggataagactctgaagttctggga 657
>dbj|AK156681.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830037C24 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence Length = 1646 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 669 gggagctgggataagactctgaagttctggga 700
>dbj|AK035278.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530008M12 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence Length = 1347 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 650 gggagctgggataagactctgaagttctggga 681
>ref|NM_175112.2| Mus musculus RAE1 RNA export 1 homolog (S. pombe) (Rae1), mRNA dbj|AK079383.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630054N05 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence Length = 1716 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 685 gggagctgggataagactctgaagttctggga 716
>dbj|AK017746.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730502H16 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence Length = 1605 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 624 gggagctgggataagactctgaagttctggga 655
>dbj|AK014325.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3230401I12 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence Length = 1639 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 661 gggagctgggataagactctgaagttctggga 692
>dbj|AK209630.1| Mus musculus cDNA, clone:Y2G0115L09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029013, based on BLAT search Length = 390 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 gggagctgggataagactctgaggtactggga 473 |||||||||||||||||||||| || |||||| Sbjct: 167 gggagctgggataagactctgaagttctggga 198
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 67 gccgccggcgccgccccagccaacccta 94 ||||||| |||||||||||||||||||| Sbjct: 3814 gccgccgccgccgccccagccaacccta 3841
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 67 gccgccggcgccgccccagccaacccta 94 ||||||| |||||||||||||||||||| Sbjct: 148156 gccgccgccgccgccccagccaacccta 148183
>dbj|AK206344.1| Mus musculus cDNA, clone:Y2G0104I18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029013, based on BLAT search Length = 212 Score = 46.1 bits (23), Expect = 0.31 Identities = 29/31 (93%) Strand = Plus / Plus Query: 443 ggagctgggataagactctgaggtactggga 473 ||||||||||||||||||||| || |||||| Sbjct: 168 ggagctgggataagactctgaagttctggga 198
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ccgccccttccctccctccccc 23 |||||||||||||||||||||| Sbjct: 1728043 ccgccccttccctccctccccc 1728064
>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence Length = 223764 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 ggagctgggataagactctgag 464 |||||||||||||||||||||| Sbjct: 212841 ggagctgggataagactctgag 212862
>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence Length = 198590 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 443 ggagctgggataagactctgag 464 |||||||||||||||||||||| Sbjct: 141738 ggagctgggataagactctgag 141717
>emb|CR925863.7| Zebrafish DNA sequence from clone DKEY-184N1 in linkage group 8, complete sequence Length = 134388 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 ccccttccctccctcccccaaa 26 |||||||||||||||||||||| Sbjct: 63426 ccccttccctccctcccccaaa 63447
>emb|AL954819.21| Zebrafish DNA sequence from clone CH211-1F7 in linkage group 8, complete sequence Length = 177929 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 ccccttccctccctcccccaaa 26 |||||||||||||||||||||| Sbjct: 874 ccccttccctccctcccccaaa 895
>emb|AL928599.5| Mouse DNA sequence from clone RP23-368M21 on chromosome 2, complete sequence Length = 113764 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 442 gggagctgggataagactctga 463 |||||||||||||||||||||| Sbjct: 26870 gggagctgggataagactctga 26891
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gccgccggcgccgccccagcc 87 ||||||||||||||||||||| Sbjct: 2356056 gccgccggcgccgccccagcc 2356076
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 gccgccggcgccgccccagcc 87 ||||||||||||||||||||| Sbjct: 3631679 gccgccggcgccgccccagcc 3631659
>gb|AC120837.6| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-439E2, Complete Sequence, complete sequence Length = 211996 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 tcagccagtcttgtgctctgc 284 ||||||||||||||||||||| Sbjct: 140587 tcagccagtcttgtgctctgc 140607
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ccgctgctgtccggcgggcag 366 ||||||||||||||||||||| Sbjct: 28345958 ccgctgctgtccggcgggcag 28345978
>emb|AL353596.13| Human DNA sequence from clone CTA-212D2 on chromosome 6 Contains the 5' end of the HBS1L gene for HBS1-like (S. cerevisiae) (KIAA1038, EFRS) and a novel gene, complete sequence Length = 108329 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 ctctgagactgcaagcatatcttct 1229 ||||||||||||||||||| ||||| Sbjct: 103303 ctctgagactgcaagcataacttct 103327
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 558 cggtactgctgatcgcaacgttgtt 582 |||| |||||||||||||||||||| Sbjct: 2350109 cggtgctgctgatcgcaacgttgtt 2350085
>emb|BX294133.1| Rhodopirellula baltica SH 1 complete genome; segment 1/24 Length = 311050 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 559 ggtactgctgatcgcaacgtt 579 ||||||||||||||||||||| Sbjct: 160658 ggtactgctgatcgcaacgtt 160638
>emb|AL645594.9| Mouse DNA sequence from clone RP23-316C11 on chromosome 11 Contains the Cct6b gene for chaperonin subunit 6b (zeta), a barrier to autointegration factor 1 (Banf1) pseudogene, a GTP binding protein 3 (Gtpbp3) pseudogene, a ribosomal protein S20 (Rps20) pseudogene, three novel genes, the Lig3 gene for ATP-dependent DNA ligase III,, complete sequence Length = 178364 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 tcagccagtcttgtgctctgc 284 ||||||||||||||||||||| Sbjct: 159650 tcagccagtcttgtgctctgc 159630
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ccgctgctgtccggcgggcag 366 ||||||||||||||||||||| Sbjct: 137715 ccgctgctgtccggcgggcag 137735
>emb|AL713882.1|CNS07YOZ Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 4B7 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 132348 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 tcagccagtcttgtgctctgc 284 ||||||||||||||||||||| Sbjct: 120145 tcagccagtcttgtgctctgc 120165
>emb|AL713886.1|CNS07YOY Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 247A17 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 126128 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 tcagccagtcttgtgctctgc 284 ||||||||||||||||||||| Sbjct: 88864 tcagccagtcttgtgctctgc 88844 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 218,188,507 Number of extensions: 11655902 Number of successful extensions: 302859 Number of sequences better than 10.0: 55 Number of HSP's gapped: 302840 Number of HSP's successfully gapped: 125 Length of query: 1272 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1249 Effective length of database: 18,503,978,556 Effective search space: 23111469216444 Effective search space used: 23111469216444 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
