ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65k17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071267:Os06g0646500 | 281 | 6e-76 | 2 | AK101953: | 278 | 5e-75 | 3 | D10422: | 82 | 1e-15 | 4 | Os02g0750100:Os02g0750100 | 48 | 2e-05 | 5 | AK071147:Os12g0446700 | 30 | 2.6 | 6 | Os11g0687000:Os11g0687000 | 30 | 4.4 | 7 | AY341855:Os01g0665500 | 30 | 4.4 | 8 | AY341844:Os01g0665500 | 30 | 4.4 | 9 | AK063662: | 29 | 7.6 | 10 | AK065880:Os07g0467600 | 29 | 7.6 | 11 | AK119275:Os02g0580800 | 28 | 9.9 | 12 | AK068477:Os02g0580800 | 28 | 9.9 |
|---|
>AK071267:Os06g0646500 | Length = 225 Score = 281 bits (719), Expect = 6e-76 Identities = 152/232 (65%), Positives = 173/232 (74%) Frame = +1 Query: 166 MAARHLRSGLPLLQARLAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXX 345 MAARHLRSGLPLL+A L+ + SRG A+QV KP IKVP+ALYGGTGNY Sbjct: 1 MAARHLRSGLPLLRAHLSQ-------EGSRGFASQVAKPTGKDIKVPEALYGGTGNYASA 53 Query: 346 XXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSD 525 +KVE+EI DVV A KKSP+FSQFIKD SVPK TRVKA+TEIFAEA FSD Sbjct: 54 LFLTAAKANLLDKVETEIRDVVEASKKSPLFSQFIKDLSVPKETRVKAITEIFAEAGFSD 113 Query: 526 ITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEXXXXXXXXXALPXXXXXXXXXTLRD 705 +T+NFL+VLA NGRLK ++RIAERFVDLTMAH+GE LP TL+D Sbjct: 114 VTKNFLAVLADNGRLKHIDRIAERFVDLTMAHKGEVKVLVRTVIPLPEKEEKELKETLQD 173 Query: 706 ILGKNKTILVEQKIDQSIMGGLVIEFGQRVFDMSIRTRAKQMESFLRQPLDM 861 ILGKNKTIL+EQKID SIMGGLVI+FGQ+VFDMSI+TRAKQME FLRQPLD+ Sbjct: 174 ILGKNKTILIEQKIDYSIMGGLVIQFGQKVFDMSIKTRAKQMEMFLRQPLDI 225
>AK101953: | Length = 225 Score = 278 bits (711), Expect = 5e-75 Identities = 151/232 (65%), Positives = 172/232 (74%) Frame = +1 Query: 166 MAARHLRSGLPLLQARLAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXX 345 MAARHLRSGLPLL+A L+ + SRG A+QV KP IKVP+ALYGGTGNY Sbjct: 1 MAARHLRSGLPLLRAHLSQ-------EGSRGFASQVAKPTGKDIKVPEALYGGTGNYASA 53 Query: 346 XXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSD 525 +KVE+EI DVV A KKSP+FSQ IKD SVPK TRVKA+TEIFAEA FSD Sbjct: 54 LFLTAAKANLLDKVETEIRDVVEASKKSPLFSQSIKDLSVPKETRVKAITEIFAEAGFSD 113 Query: 526 ITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEXXXXXXXXXALPXXXXXXXXXTLRD 705 +T+NFL+VLA NGRLK ++RIAERFVDLTMAH+GE LP TL+D Sbjct: 114 VTKNFLAVLADNGRLKHIDRIAERFVDLTMAHKGEVKVLVRTVIPLPEKEEKELKETLQD 173 Query: 706 ILGKNKTILVEQKIDQSIMGGLVIEFGQRVFDMSIRTRAKQMESFLRQPLDM 861 ILGKNKTIL+EQKID SIMGGLVI+FGQ+VFDMSI+TRAKQME FLRQPLD+ Sbjct: 174 ILGKNKTILIEQKIDYSIMGGLVIQFGQKVFDMSIKTRAKQMEMFLRQPLDI 225
>D10422: | Length = 81 Score = 81.6 bits (200), Expect = 1e-15 Identities = 43/79 (54%), Positives = 51/79 (64%) Frame = +1 Query: 490 VTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEXXXXXXXXXALPX 669 +TEI AEA FSD+ +NFL+VL NGRLK ++ IAERFVDL MAH+GE LP Sbjct: 1 ITEILAEAGFSDVXKNFLAVLXDNGRLKHIDXIAERFVDLXMAHKGEVKXLVRTVIPLPE 60 Query: 670 XXXXXXXXTLRDILGKNKT 726 T +DILGKN T Sbjct: 61 KEEKALKETFQDILGKNPT 79
>Os02g0750100:Os02g0750100 | Length = 243 Score = 47.8 bits (112), Expect = 2e-05 Identities = 30/141 (21%), Positives = 64/141 (45%), Gaps = 3/141 (2%) Frame = +1 Query: 439 SQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMA 618 ++F + +VP+ + + + EI ++ NFL+V+ NGR + +I F + + Sbjct: 98 AEFFDNPTVPRDEKAQLIDEIAKSSELQAHVVNFLNVVVDNGRAGLMTQIVREFENAFNS 157 Query: 619 HRGEXXXXXXXXXALPXXXXXXXXXTLRDILGKNKTILVEQKIDQSIMGGLVIEFGQ--- 789 G L ++++ G K + V+ +ID ++ G I++G+ Sbjct: 158 LTGTEVATVTSVVQLESQDLAQIAQQVQNLTGA-KNVRVKTRIDPELIAGFTIQYGRDGS 216 Query: 790 RVFDMSIRTRAKQMESFLRQP 852 + DMS+R + +++ S P Sbjct: 217 SLIDMSVRKQIEEITSEFEMP 237
>AK071147:Os12g0446700 | Length = 189 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/64 (25%), Positives = 31/64 (48%) Frame = +2 Query: 725 PSWLNKRLTRVSWEDW*LNLGRGCLTCRSGLGRSKWSRS*GNPLTCNCLSDQKQHQSAVA 904 PSW + R+ WE W +NL + G G+S+ S++ + L + ++A+ Sbjct: 97 PSWFTSKTERIYWEQWFINLH---VISPKGHGKSRSSKA-STSIRGKALEEASSKRAALG 152 Query: 905 ALLK 916 L++ Sbjct: 153 LLIQ 156
>Os11g0687000:Os11g0687000 | Length = 1135 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/52 (28%), Positives = 30/52 (57%) Frame = +1 Query: 466 PKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAH 621 P T + +TE+F + + +TQ+ LS L + RL +++ I+++ + M H Sbjct: 794 PFVTSLSGLTELFISS--ATLTQDHLSALITLNRLLYLKLISDKLENFEMKH 843
>AY341855:Os01g0665500 | Length = 580 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 18 CCGQALHCASPPPFPSPSYETRRQPRLFLLPDPISSS*VSLSTTAERTG 164 CC H PPP S ++ TRR + P P S+ ++S+ ++ TG Sbjct: 69 CCCCTAHVIPPPPPVSRTHATRRDAEASVPPPPASA---AVSSRSDGTG 114
>AY341844:Os01g0665500 | Length = 565 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 18 CCGQALHCASPPPFPSPSYETRRQPRLFLLPDPISSS*VSLSTTAERTG 164 CC H PPP S ++ TRR + P P S+ ++S+ ++ TG Sbjct: 54 CCCCTAHVIPPPPPVSRTHATRRDAEASVPPPPASA---AVSSRSDGTG 99
>AK063662: | Length = 374 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 Query: 1020 RRTIFNFISTEKHG*KHEERSWKVFNSSVCNFPLKCYFPL 1139 R T+FNFI T + K E WK+ N + +PL Sbjct: 312 RTTLFNFIVTREETLKAAEELWKLIEKDGLNVKIHEVYPL 351
>AK065880:Os07g0467600 | Length = 176 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 9/52 (17%) Frame = +3 Query: 39 CASPPPFPSPSYETRRQPRLFL------LPDP---ISSS*VSLSTTAERTGN 167 C SPPP P P R PR L LP P SSS + L T R G+ Sbjct: 10 CLSPPPPPPPHKRVRASPRPRLRDPNPSLPAPSESASSSRIRLPTHPHRRGS 61
>AK119275:Os02g0580800 | Length = 318 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 832 ESFLRQPLDM*LPFGSKATPECSGSAVEGSLMSASSMWS*NKSFPLQENGT 984 ES L P+ P G CSG+ S S SS WS ++S ++ T Sbjct: 80 ESPLHSPVSYNPPIGCLQQKHCSGNGGGRSFSSGSSAWSSSRSVTDSDDDT 130
>AK068477:Os02g0580800 | Length = 318 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 832 ESFLRQPLDM*LPFGSKATPECSGSAVEGSLMSASSMWS*NKSFPLQENGT 984 ES L P+ P G CSG+ S S SS WS ++S ++ T Sbjct: 80 ESPLHSPVSYNPPIGCLQQKHCSGNGGGRSFSSGSSAWSSSRSVTDSDDDT 130 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,505,622 Number of extensions: 767468 Number of successful extensions: 2491 Number of sequences better than 10.0: 12 Number of HSP's gapped: 2482 Number of HSP's successfully gapped: 12 Length of query: 400 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 297 Effective length of database: 11,275,632 Effective search space: 3348862704 Effective search space used: 3348862704 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
