ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68h23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK122159:Os01g0644000 | 107 | 6e-24 | 2 | AK063835:Os01g0644000 | 107 | 6e-24 | 3 | AK121137:Os07g0618600 | 30 | 0.87 | 4 | AK072722:Os08g0509100 | 29 | 1.5 | 5 | AK066825:Os08g0509100 | 29 | 1.5 | 6 | Os01g0921100:Os01g0921100 | 28 | 3.3 | 7 | AK102681:Os02g0530600 | 28 | 3.3 | 8 | AK109447:Os07g0608400 | 27 | 5.7 | 9 | AK105648:Os03g0264400 | 27 | 5.7 | 10 | AB022603:Os03g0264400 | 27 | 5.7 | 11 | AK058346:Os02g0710800 | 27 | 7.4 | 12 | Os08g0467600:Os08g0467600 | 27 | 9.7 | 13 | Os02g0183000:Os02g0183000 | 27 | 9.7 | 14 | AK067928:Os07g0100500 | 27 | 9.7 | 15 | AK066470:Os07g0100500 | 27 | 9.7 |
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>AK122159:Os01g0644000 | Length = 130 Score = 107 bits (266), Expect = 6e-24 Identities = 69/130 (53%), Positives = 83/130 (63%), Gaps = 6/130 (4%) Frame = +2 Query: 80 MAVTSLQLPSPIHWL-TPARNGCTRTRPRA-TLVSCKHNQSTIVQEASRTS---RRGTVA 244 M +T+LQL PI L ARNG RPR T+ C+HNQ+T V E+ TS RR ++ Sbjct: 1 MVITALQLLPPILGLPATARNGYAVRRPRMMTVTCCRHNQATTVHESRLTSSLSRRDALS 60 Query: 245 YISSALFAMFMVAERAEARTSRQENKRKVMEKLEKIREEALG-XXXXXXXXXXXXVANLL 421 Y+SSA A +VA AEARTSRQENKRKV EKLEK+RE+ALG +ANLL Sbjct: 61 YMSSAFIATLLVAGPAEARTSRQENKRKVREKLEKLREKALGPDDKNGAIRKKESLANLL 120 Query: 422 IPPTLVDAYI 451 IPP LV+A I Sbjct: 121 IPPKLVEATI 130
>AK063835:Os01g0644000 | Length = 130 Score = 107 bits (266), Expect = 6e-24 Identities = 69/130 (53%), Positives = 83/130 (63%), Gaps = 6/130 (4%) Frame = +2 Query: 80 MAVTSLQLPSPIHWL-TPARNGCTRTRPRA-TLVSCKHNQSTIVQEASRTS---RRGTVA 244 M +T+LQL PI L ARNG RPR T+ C+HNQ+T V E+ TS RR ++ Sbjct: 1 MVITALQLLPPILGLPATARNGYAVRRPRMMTVTCCRHNQATTVHESRLTSSLSRRDALS 60 Query: 245 YISSALFAMFMVAERAEARTSRQENKRKVMEKLEKIREEALG-XXXXXXXXXXXXVANLL 421 Y+SSA A +VA AEARTSRQENKRKV EKLEK+RE+ALG +ANLL Sbjct: 61 YMSSAFIATLLVAGPAEARTSRQENKRKVREKLEKLREKALGPDDKNGAIRKKESLANLL 120 Query: 422 IPPTLVDAYI 451 IPP LV+A I Sbjct: 121 IPPKLVEATI 130
>AK121137:Os07g0618600 | Length = 297 Score = 30.0 bits (66), Expect = 0.87 Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 6/104 (5%) Frame = -2 Query: 295 FSTFSHHEHCKQSRRNVCHGTST---RCPACFLDNG*LVMFTA-NKSSARPCAGAAIS-- 134 F+TF HC+ R +CH S+ P + V + NKSS+R G A S Sbjct: 22 FTTFRRRHHCRNCGRTLCHEHSSYHMALPQYGIYTDVRVCYDCFNKSSSRGGVGNAGSPG 81 Query: 133 SRSKPVDRRGQLQRSDGHCCS*MRTEKLALGTGGSAVEGKCKCP 2 S S D L + S M+ A + + +E KC P Sbjct: 82 SVSSAADSFSGLNLGEDDASSPMKNS--AFHSAPAVIECKCGMP 123
>AK072722:Os08g0509100 | Length = 244 Score = 29.3 bits (64), Expect = 1.5 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 29 TTTGTQRKLLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPR-----ATLVSCKHNQ 193 TTT + + ++ + SL+ PSP + A GC TR R +V C Sbjct: 15 TTTTSSSSSTQLYFASSSCIASLRRPSPPSLIAGA--GCRTTRRRQQGRQRVVVRCA--S 70 Query: 194 STIVQEASRTSRRGT 238 S+ AS +RRGT Sbjct: 71 SSAASSASEAARRGT 85
>AK066825:Os08g0509100 | Length = 941 Score = 29.3 bits (64), Expect = 1.5 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 29 TTTGTQRKLLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPR-----ATLVSCKHNQ 193 TTT + + ++ + SL+ PSP + A GC TR R +V C Sbjct: 15 TTTTSSSSSTQLYFASSSCIASLRRPSPPSLIAGA--GCRTTRRRQQGRQRVVVRCA--S 70 Query: 194 STIVQEASRTSRRGT 238 S+ AS +RRGT Sbjct: 71 SSAASSASEAARRGT 85
>Os01g0921100:Os01g0921100 | Length = 383 Score = 28.1 bits (61), Expect = 3.3 Identities = 17/59 (28%), Positives = 23/59 (38%) Frame = +2 Query: 53 LLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSR 229 LLG+ T + V + W TP TR +A V+C I E R +R Sbjct: 15 LLGAASATALIVFVFTSTASPAWPTPEATPATRQEKKAAAVACAPRAKGIDSETRRAAR 73
>AK102681:Os02g0530600 | Length = 831 Score = 28.1 bits (61), Expect = 3.3 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 277 GG*TC*SKNLQTREQEESNGEAGEDPGGGTRLKGEERE 390 GG SKN +T + EE +GE ++P +LK EE + Sbjct: 33 GGQQAPSKNKKTADNEEHDGE--QEPSKNKKLKAEESD 68
>AK109447:Os07g0608400 | Length = 278 Score = 27.3 bits (59), Expect = 5.7 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = +1 Query: 319 QEESNGEAGEDPGGGTRLKGEEREHE---*GVCGELANPSYFGRC 444 +EE G E+ GGG G E EH G CGE F C Sbjct: 183 REEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWIC 227
>AK105648:Os03g0264400 | Length = 606 Score = 27.3 bits (59), Expect = 5.7 Identities = 20/75 (26%), Positives = 32/75 (42%) Frame = +2 Query: 125 TPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYISSALFAMFMVAERAEART 304 TP+R P A + + RTSRRG V + A ++ A AR Sbjct: 10 TPSRLAARPATPAAAAAPVRARAAVAAGGRRRTSRRGGVRCSAGKPEASAVINGSAAARA 69 Query: 305 SRQENKRKVMEKLEK 349 + +E++R+ E E+ Sbjct: 70 A-EEDRRRFFEAAER 83
>AB022603:Os03g0264400 | Length = 606 Score = 27.3 bits (59), Expect = 5.7 Identities = 20/75 (26%), Positives = 32/75 (42%) Frame = +2 Query: 125 TPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYISSALFAMFMVAERAEART 304 TP+R P A + + RTSRRG V + A ++ A AR Sbjct: 10 TPSRLAARPATPAAAAAPVRARAAVAAGGRRRTSRRGGVRCSAGKPEASAVINGSAAARA 69 Query: 305 SRQENKRKVMEKLEK 349 + +E++R+ E E+ Sbjct: 70 A-EEDRRRFFEAAER 83
>AK058346:Os02g0710800 | Length = 410 Score = 26.9 bits (58), Expect = 7.4 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +3 Query: 93 LCSCPLRSTGLLLLEMAAPAQGRALLLLAVNITSQPLSKKQAGHLVEVP 239 LCS P L +LE ++ A L + L KKQ+GHL E P Sbjct: 313 LCSTPSALPRLKVLEKSSDGFYLANADLLLRGPGDLLGKKQSGHLPEFP 361
>Os08g0467600:Os08g0467600 | Length = 670 Score = 26.6 bits (57), Expect = 9.7 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = +1 Query: 310 TREQEESNGEAGEDPG-GGTRLKGEERE 390 TRE EE G AG G GG ++G+ E Sbjct: 587 TRELEEGGGMAGRKKGEGGATIRGDREE 614
>Os02g0183000:Os02g0183000 | Length = 185 Score = 26.6 bits (57), Expect = 9.7 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = -2 Query: 295 FSTFSHHEHCKQSRRNVC--HGTSTRCPAC 212 F S HEH K++ +N+C ++ CP C Sbjct: 16 FIACSFHEHAKKNEKNICCLDCCTSICPHC 45
>AK067928:Os07g0100500 | Length = 503 Score = 26.6 bits (57), Expect = 9.7 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 9 LHLPSTALPPVPNASFSVLI*EQQWPSLLCSCPLRSTGLLLLEM 140 LH+P T++ P+P S L+ Q P+ S + +T L L + Sbjct: 283 LHMPVTSVEPLPLPPLSSLLSNDQPPTSTVSAKMDTTDLPSLNL 326
>AK066470:Os07g0100500 | Length = 503 Score = 26.6 bits (57), Expect = 9.7 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 9 LHLPSTALPPVPNASFSVLI*EQQWPSLLCSCPLRSTGLLLLEM 140 LH+P T++ P+P S L+ Q P+ S + +T L L + Sbjct: 283 LHMPVTSVEPLPLPPLSSLLSNDQPPTSTVSAKMDTTDLPSLNL 326 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,379,196 Number of extensions: 286380 Number of successful extensions: 931 Number of sequences better than 10.0: 15 Number of HSP's gapped: 925 Number of HSP's successfully gapped: 15 Length of query: 167 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 74 Effective length of database: 11,676,042 Effective search space: 864027108 Effective search space used: 864027108 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
