ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68h23 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g45640:12001.t04018:unspliced-genomic tat pathway signal sequence family protein, expressed| Length = 1974 Score = 77.6 bits (163), Expect(5) = 8e-24 Identities = 35/52 (67%), Positives = 41/52 (78%) Frame = +2 / +3 Query: 215 SRTSRRGTVAYISSALFAMFMVAERAEARTSRQENKRKVMEKLEKIREEALG 370 S SRR ++Y+SSA A +VA AEARTSRQENKRKV EKLEK+RE+ALG Sbjct: 1563 SSLSRRDALSYMSSAFIATLLVAGPAEARTSRQENKRKVREKLEKLREKALG 1718 Score = 31.3 bits (62), Expect(5) = 8e-24 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +2 / +3 Query: 407 VANLLIPPTLVDAYI*KA 460 +ANLLIPP LV+A I*KA Sbjct: 1758 LANLLIPPKLVEATI*KA 1811 Score = 29.0 bits (57), Expect(5) = 8e-24 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 / +1 Query: 31 YHRYPTQASRFSSRNNNGRHFSAAALSDP 117 +H+ +S+ S NNG H SAA+ S+P Sbjct: 163 HHQRHLPSSQVPSSRNNGNHGSAASPSNP 249 Score = 25.8 bits (50), Expect(5) = 8e-24 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +1 / +3 Query: 13 TCLLRHYH 36 TCLLRHYH Sbjct: 135 TCLLRHYH 158 Score = 23.1 bits (44), Expect(5) = 8e-24 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +2 / +2 Query: 101 LPSPIHWLTPARNGCTRTRPRATLVSC 181 LP + ARNG RPR V+C Sbjct: 236 LPPILGLPATARNGYAVRRPRMMTVTC 316 Score = 71.2 bits (149), Expect(3) = 5e-14 Identities = 33/53 (62%), Positives = 36/53 (67%) Frame = +1 / +2 Query: 211 SKQDIS*RYRGIHFVCFVCNVHGG*TC*SKNLQTREQEESNGEAGEDPGGGTR 369 +KQ I *R IH VC N GG +C SKNLQ REQE+S GEAGE PG GTR Sbjct: 1559 NKQFIP*RCTVIHVVCVHSNASGGWSCRSKNLQAREQEKSKGEAGEAPGEGTR 1717 Score = 24.0 bits (46), Expect(3) = 5e-14 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 / +2 Query: 400 GVCGELANPSYFGRCLHLK 456 G+ GEL + S GR HLK Sbjct: 1751 GIFGELVDSS*IGRGYHLK 1807 Score = 23.1 bits (44), Expect(3) = 5e-14 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2 / +1 Query: 5 ALALAFYGTTT 37 ++AL FYGTTT Sbjct: 127 SVALVFYGTTT 159 Score = 47.3 bits (97), Expect(4) = 2e-12 Identities = 21/40 (52%), Positives = 24/40 (60%) Frame = -2 / -2 Query: 331 YFPLVLLSGGSCFSTFSHHEHCKQSRRNVCHGTSTRCPAC 212 YF LVLL GGSCF SH + C + RR+V ST AC Sbjct: 1679 YFSLVLLPGGSCFCRTSHQKRCYERRRHV*QCISTG*TAC 1560 Score = 37.3 bits (75), Expect(4) = 2e-12 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = -3 / -3 Query: 459 AFQM*ASTKVGGISKFATDSLL 394 AFQM AST +GGI+KFA DS L Sbjct: 1810 AFQMVASTNLGGINKFAKDSFL 1745 Score = 23.5 bits (45), Expect(4) = 2e-12 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 / -3 Query: 35 W*CRRRQV 12 W*CRRRQV Sbjct: 157 W*CRRRQV 134 Score = 22.1 bits (42), Expect(4) = 2e-12 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -3 / -1 Query: 180 QLTRVARGLVRVQPFLA 130 Q+T + RGL+ PFLA Sbjct: 315 QVTVIIRGLLTA*PFLA 265 Score = 46.9 bits (96), Expect = 1e-04 Identities = 21/35 (60%), Positives = 25/35 (71%) Frame = -3 / -3 Query: 312 CLEVLASARSATMNIANKADEMYATVPLRDVLLAS 208 CLEVLASA AT ++A AD+MY + LRD LL S Sbjct: 1660 CLEVLASAGPATRSVAMNADDMYDSASLRDKLLVS 1556 Score = 42.3 bits (86), Expect = 0.002 Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = -1 / -1 Query: 308 WRFLLQHVQPP*TLQTKQTKCMPRYLYEMSCLL 210 WRFLL QPP L QT CM +LY ++CLL Sbjct: 1656 WRFLLLQDQPPEALL*TQTTCMTVHLYGINCLL 1558 Score = 37.3 bits (75), Expect = 0.076 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = +3 / +1 Query: 213 QAGHLVEVPWHTFRLLCLQCSWWLNVLKQEPP 308 QA + VE+ HT RL Q WWL + KQEPP Sbjct: 1561 QAVYPVEMHCHTCRLRS*QRFWWLVLQKQEPP 1656
>LOC_Os01g15770:12001.t01428:unspliced-genomic expressed protein| Length = 2170 Score = 32.7 bits (65), Expect(2) = 0.053 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +2 / -1 Query: 125 TPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYIS 253 TP R CT P A + K +T V++ + T+ R V Y+S Sbjct: 604 TPRRTPCTTASPPAPSSAAKPTTTTTVRKTTTTTWRTYVLYVS 476 Score = 22.6 bits (43), Expect(2) = 0.053 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 / -2 Query: 331 NGEAGEDPGGG 363 +GEAGE GGG Sbjct: 396 DGEAGEGDGGG 364
>LOC_Os12g36170:12012.t03302:unspliced-genomic HEAT repeat family protein, expressed| Length = 6160 Score = 36.8 bits (74), Expect = 0.10 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +1 / -3 Query: 319 QEESNGEAGEDPGGGTRLKGEERE 390 +E GEAGED GGG R +GEE E Sbjct: 329 REARGGEAGEDGGGGGRRRGEEGE 258
>LOC_Os11g24770:12011.t02097:unspliced-genomic conserved hypothetical protein| Length = 2363 Score = 34.5 bits (69), Expect = 0.51 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = +3 / -3 Query: 90 LLCSCPLRSTGLLLLEMAAPAQGRALLLLAVNITSQPLSKKQAGHLVEVPWHTFRLLCLQ 269 +L S PLR G+LLL +A QGR AV++ LV+ R LC Sbjct: 1734 ILSSPPLR*AGVLLLSLAPDGQGRCHDSRAVSVVDSAAETGGGAPLVQTLASGQRRLCAG 1555 Query: 270 CSW 278 +W Sbjct: 1554 GTW 1546
>LOC_Os07g40860:12007.t03745:unspliced-genomic vegetative cell wall protein gp1 precursor, putative, expressed| Length = 1145 Score = 33.6 bits (67), Expect = 0.97 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 / -2 Query: 107 SPIHWLTPARNGCTRTRPRATLVSC 181 +P W+TPAR G T PRAT+ C Sbjct: 205 APPAWVTPARWGAAGTPPRATVPRC 131
>LOC_Os02g09430:12002.t00790:unspliced-genomic exostosin-like, putative, expressed| Length = 3414 Score = 33.1 bits (66), Expect = 1.3 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = +1 / -2 Query: 328 SNGEAGEDPGGGTRLKGEEREHE*GVCGELANPSYFGR 441 ++GE G GG R +GEE E E*G GE S GR Sbjct: 236 ADGEGGWGRGGAERAEGEEGEGE*GEGGE*QERSGEGR 123
>LOC_Os04g28410:12004.t02538:unspliced-genomic expressed protein| Length = 873 Score = 32.7 bits (65), Expect = 1.8 Identities = 18/76 (23%), Positives = 33/76 (43%) Frame = +2 / +2 Query: 101 LPSPIHWLTPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYISSALFAMFMV 280 LP P+ W PA +R R +H +++ A+ +RRG ++SA + Sbjct: 170 LPRPLQWRPPAVLRAQESRARRRRRRRRHGLRRLLRPAAAHARRGRRRGVASASASAATP 349 Query: 281 AERAEARTSRQENKRK 328 A + R + +R+ Sbjct: 350 ATESPRRLPHRPRRRR 397
>LOC_Os03g05920:12003.t00463:unspliced-genomic monooxygenase, putative, expressed| Length = 2642 Score = 30.9 bits (61), Expect(2) = 2.1 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +1 / +1 Query: 307 QTREQEESNGEAGEDPGGGTRLKGEEREHE*GV 405 Q E E GEDPGGG ER+ GV Sbjct: 1729 QDAELRGGEAEGGEDPGGGAGRDRAERDERRGV 1827 Score = 22.1 bits (42), Expect(2) = 2.1 Identities = 11/33 (33%), Positives = 14/33 (42%) Frame = +1 / +3 Query: 22 LRHYHRYPTQASRFSSRNNNGRHFSAAALSDPL 120 L HY + A R R G + A +DPL Sbjct: 1359 LMHYCAFSEGADRLRRRELGGGEVAWPAKADPL 1457
>LOC_Os03g14380:12003.t01227:unspliced-genomic autophagy protein 9, putative, expressed| Length = 7524 Score = 29.9 bits (59), Expect(2) = 2.1 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +3 / -1 Query: 249 FRLLCLQCSWWLNVLKQE 302 + LL +QC+WW VL Q+ Sbjct: 5574 YSLLKMQCTWWTKVLNQK 5521 Score = 24.4 bits (47), Expect(2) = 2.1 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 / -1 Query: 415 LANPSYFGRCLHLKGIVSL 471 L +YFGRC +L I+ L Sbjct: 2064 LTYQTYFGRCTNLMSILGL 2008
>LOC_Os05g20620:12005.t01823:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 8418 Score = 32.2 bits (64), Expect = 2.5 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -2 / -3 Query: 280 HHEHCKQSRRNVCHGTSTR 224 HH HC +RR CHG R Sbjct: 1012 HHYHCTLARRGACHGCCLR 956
>LOC_Os01g69200:12001.t06273:unspliced-genomic regulatory protein, putative, expressed| Length = 1347 Score = 32.2 bits (64), Expect = 2.5 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = +2 / +1 Query: 53 LLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRR 232 LLG+ T + V + W TP TR +A V+C I E R +R Sbjct: 73 LLGAASATALIVFVFTSTASPAWPTPEATPATRQEKKAAAVACAPRAKGIDSETRRAART 252 Query: 233 GTVA 244 V+ Sbjct: 253 NQVS 264
>LOC_Os07g49370:12007.t04565:unspliced-genomic beta3-glucuronyltransferase, putative, expressed| Length = 5891 Score = 31.8 bits (63), Expect = 3.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 / -3 Query: 307 GGSCFSTFSHHEHCKQSRRNVCHGTSTRCPA 215 GG + ++ H H RR+ HG T+CPA Sbjct: 2736 GGCVDAEWALHHHLSLVRRHCRHGPRTKCPA 2644
>LOC_Os01g44030:12001.t03915:unspliced-genomic hypothetical protein| Length = 1594 Score = 31.8 bits (63), Expect = 3.4 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -2 / -1 Query: 271 HCKQSRRNVCHGTSTRCPACFL 206 H Q ++N+C+ ++TRCP F+ Sbjct: 700 HIYQPQQNICNDSTTRCPRTFI 635
>LOC_Os10g41290:12010.t03365:unspliced-genomic protein kinase PVPK-1, putative, expressed| Length = 2980 Score = 26.7 bits (52), Expect(2) = 4.1 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -2 / +2 Query: 277 HEHCKQSRRNVCHGTSTRCPAC 212 H HC SR+ T R P+C Sbjct: 11 HAHCTPSRQEATVTTRARAPSC 76 Score = 25.4 bits (49), Expect(2) = 4.1 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -2 / +2 Query: 43 GTGGSAVEGKCKCP 2 G G+A G+C CP Sbjct: 701 GASGAATSGRCTCP 742
>LOC_Os09g17730:12009.t01558:unspliced-genomic proton pump interactor, putative, expressed| Length = 9066 Score = 31.3 bits (62), Expect = 4.7 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = +3 / +1 Query: 81 WPSLLCSCPLRSTGLLLLE 137 WP+++C+C RS+G L+E Sbjct: 5809 WPNIVCNCYFRSSGRALME 5865
>LOC_Os07g08680:12007.t00743:unspliced-genomic expressed protein| Length = 1885 Score = 31.3 bits (62), Expect = 4.7 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 / -3 Query: 12 HLPSTALPPVPNASFSVLI*EQQWPSLLCSCPLRST 119 HLP PP+P F +Q PS C LRS+ Sbjct: 1379 HLPQCFAPPIPQHPFPAASSPKQIPSSCGRCSLRSS 1272
>LOC_Os05g25210:12005.t02177:unspliced-genomic expressed protein| Length = 5607 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 / +2 Query: 304 LQTREQEESNGEAGEDPGGGTRLKG 378 L TRE E+N + +D GGG R +G Sbjct: 137 LATREPSETNPQLDDDHGGGARRRG 211
>LOC_Os03g46930:12003.t04057:unspliced-genomic conserved hypothetical protein| Length = 476 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +3 / -2 Query: 21 STALPPVPNASFSVLI*EQQWPSLLCSC 104 + AL P P++ F L+ WP CSC Sbjct: 376 AAALSPWPSSCFFFLLLSSPWPLFFCSC 293
>LOC_Os03g26620:12003.t02347:unspliced-genomic acyltransferase, putative, expressed| Length = 1851 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 / -2 Query: 104 PSPIHWLTPARNGCTRTRPRA 166 P P TP+R GCT RPRA Sbjct: 572 PRPAWRCTPSRRGCTPRRPRA 510
>LOC_Os03g26590:12003.t02344:unspliced-genomic expressed protein| Length = 6747 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 / +2 Query: 104 PSPIHWLTPARNGCTRTRPRA 166 P P TP+R GCT RPRA Sbjct: 6101 PRPAWRCTPSRRGCTPRRPRA 6163
>LOC_Os01g58670:12001.t05262:unspliced-genomic expressed protein| Length = 4475 Score = 31.3 bits (62), Expect = 4.7 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -2 / -3 Query: 112 RRGQLQRSDGHCCS*MRTEKLALGTGGSAVEGKCKC 5 RRG+ +R G CC R G GG G+ +C Sbjct: 681 RRGR*RRRRGRCCCRPRCRWRGPGVGGPGCRGRWRC 574
>LOC_Os01g10504:12001.t00924:unspliced-genomic MADS-box transcription factor 3, putative, expressed| Length = 9297 Score = 31.3 bits (62), Expect = 4.7 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / +2 Query: 193 LVMFTANKSSARPCAGAAISSRSKPVDRRGQLQRSDGHCCS*MRTEKL 50 L +F++NK + C ++S + + R + + GHCC M +KL Sbjct: 2210 LFVFSSNKEN*NLCTKISVSMLCENMSCRHKKNYTHGHCCLVMLKKKL 2353
>LOC_Os01g14840:12001.t01339:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 4822 Score = 24.9 bits (48), Expect(3) = 5.9 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = +3 / -3 Query: 33 PPVPNASFSVLI*EQQWPSLLCSCPLR 113 P P F L+ + WP LC P + Sbjct: 4442 PAKPIRHFFALLMKSLWPPRLCQAPFK 4362 Score = 23.5 bits (45), Expect(3) = 5.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +1 / -2 Query: 109 SDPLAYSC*KWLHPHKA 159 S P+AYSC LH +A Sbjct: 3336 SQPMAYSCNAILHGRRA 3286 Score = 22.1 bits (42), Expect(3) = 5.9 Identities = 6/7 (85%), Positives = 7/7 (100%) Frame = +1 / -3 Query: 262 VCNVHGG 282 VCN+HGG Sbjct: 1952 VCNIHGG 1932
>LOC_Os08g33700:12008.t03111:unspliced-genomic selenium-binding protein-like, putative, expressed| Length = 4250 Score = 25.4 bits (49), Expect(2) = 5.9 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = +3 / +1 Query: 108 LRSTGLLLLEMAAPAQGRALLLLAVNITSQPLSKKQAGHLVEVP 239 L TGLLLL +A A L L A ++ S HL P Sbjct: 142 LLRTGLLLLPLAPTAASAFLSLAAASLPSHRALPVLLHHLALAP 273 Score = 22.6 bits (43), Expect(2) = 5.9 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +3 / +3 Query: 6 HLHLPSTALPPVPNA 50 H+ P ALPP P A Sbjct: 96 HVAAPRGALPPAPRA 140
>LOC_Os09g36000:12009.t03078:unspliced-genomic hypothetical protein| Length = 1403 Score = 30.9 bits (61), Expect = 6.5 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 / -3 Query: 322 EESNGEAGEDPGGGTRLKGEEREHE 396 E+ GE EDPG L GEE E E Sbjct: 606 EDDAGEGREDPGEAELLAGEEAEEE 532
>LOC_Os06g31380:12006.t02839:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2739 Score = 30.9 bits (61), Expect = 6.5 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 / +2 Query: 307 QTREQEESNGEAGEDPGGGTRLKGEERE 390 + RE+E++ E G+D GGT G R+ Sbjct: 881 ERREREDAGREEGDDRAGGTHRSGARRQ 964
>LOC_Os05g43960:12005.t03885:unspliced-genomic no apical meristem protein, expressed| Length = 1634 Score = 30.9 bits (61), Expect = 6.5 Identities = 19/66 (28%), Positives = 26/66 (39%) Frame = +2 / +1 Query: 119 WLTPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYISSALFAMFMVAERAEA 298 W++ G TR R +A + K S A+RTS G +SS A Sbjct: 685 WISTCCAGFTRRRRKAQTTASKPKSSAAAAAAARTSTSGRKPALSSTWVPRRRRAATMRM 864 Query: 299 RTSRQE 316 R R+E Sbjct: 865 RRRRRE 882
>LOC_Os05g35400:12005.t03133:unspliced-genomic luminal-binding protein 5 precursor, putative, expressed| Length = 2273 Score = 30.9 bits (61), Expect = 6.5 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 / -2 Query: 178 ANKSSARPCAGAAISSRSKPVDRRGQLQRSDGHCCS 71 ++ S+ CAG+A SSR +P RG R G CS Sbjct: 1465 SSSSAPPCCAGSAWSSRRRPSPGRG*AARRRGGSCS 1358
>LOC_Os05g13680:12005.t01146:unspliced-genomic hypothetical protein| Length = 1506 Score = 30.9 bits (61), Expect = 6.5 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +2 / -2 Query: 149 RTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYISSALFAMFMVAERAEARTS 307 +T P + SC QST AS SRRGT + A+ M+ +A +S Sbjct: 185 QTAPLSDPSSCSRRQSTRRPWASACSRRGTTMSNNPAVSTMWSTRSLRDASSS 27
>LOC_Os04g55230:12004.t04996:unspliced-genomic ataxin-2 C-terminal region family protein, expressed| Length = 13313 Score = 30.9 bits (61), Expect = 6.5 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = -3 / -1 Query: 240 TVPLRDVLLASWTMVDWLC 184 T+ L+D++ SW +DW+C Sbjct: 7898 TMCLKDLMTISWMQIDWIC 7842
>LOC_Os03g36780:12003.t03146:unspliced-genomic elongation factor G, mitochondrial precursor, putative, expressed| Length = 14525 Score = 30.9 bits (61), Expect = 6.5 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +1 / -1 Query: 304 LQTREQEESNGEAGEDPGGGTRLKGEEREHE*G 402 ++ E+E E GE+ GGGT G R E G Sbjct: 227 IERLEEEREGAERGEETGGGTPCHGHRRLGESG 129
>LOC_Os04g58320:12004.t05295:unspliced-genomic ubiquitin-protein ligase/ zinc ion binding protein, putative,| expressed Length = 2563 Score = 26.3 bits (51), Expect(2) = 6.5 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +1 / +1 Query: 382 EREHE*GVCGELANPSYFGRCLH 450 ERE E G+C E+ N C H Sbjct: 1192 EREEECGICMEMNNKVVLPNCSH 1260 Score = 24.9 bits (48), Expect(2) = 6.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 / +1 Query: 343 GEDPGGGTRLKGEEREHE 396 G GGG R +GEE E E Sbjct: 202 GGGGGGGGRRRGEEEEEE 255
>LOC_Os03g36030:12003.t03079:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4544 Score = 24.0 bits (46), Expect(3) = 7.0 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +1 / +3 Query: 334 GEAGEDPGGGTRLKGEERE 390 G G PGG T+ G+E E Sbjct: 747 G*QGNPPGGSTQQDGQEEE 803 Score = 23.5 bits (45), Expect(3) = 7.0 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +1 / +2 Query: 436 GRCLHLKGIVSLI 474 G C+H KGI+ L+ Sbjct: 2720 GSCVHTKGIIQLM 2758 Score = 22.6 bits (43), Expect(3) = 7.0 Identities = 10/36 (27%), Positives = 17/36 (47%) Frame = +3 / +1 Query: 201 LSKKQAGHLVEVPWHTFRLLCLQCSWWLNVLKQEPP 308 L++ Q +V + T +L +WW N + PP Sbjct: 367 LNRLQCNDQEKVAFATHQLQGPASAWWDNHMATRPP 474
>LOC_Os09g19650:12009.t01700:unspliced-genomic expressed protein| Length = 5737 Score = 27.2 bits (53), Expect(2) = 7.2 Identities = 11/41 (26%), Positives = 19/41 (46%) Frame = +2 / -1 Query: 110 PIHWLTPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRR 232 P TP+R GCT + P A+ + + + + + RR Sbjct: 625 PCRRCTPSRRGCTSSSPAASRTAARSSTPATAPARTWSRRR 503 Score = 24.9 bits (48), Expect(2) = 7.2 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / -3 Query: 10 CTCLLRHYHRYPTQASRF 63 C C L Y YPT+ S F Sbjct: 4922 CVCWLGSYLLYPTEKSSF 4869
>LOC_Os07g34050:12007.t03082:unspliced-genomic harpin-induced protein, putative| Length = 573 Score = 26.7 bits (52), Expect(2) = 7.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 / -3 Query: 110 PIHWLTPARNGCTRTRPR 163 P H TP +GCT RPR Sbjct: 250 PRHTRTPRGSGCTPPRPR 197 Score = 22.1 bits (42), Expect(2) = 7.5 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +1 / -1 Query: 325 ESNGEAGEDPGGGTR 369 E + GED GGG R Sbjct: 87 ERGEDGGEDDGGGER 43
>LOC_Os12g31880:12012.t02891:unspliced-genomic eukaryotic translation initiation factor 5B, putative, expressed| Length = 5897 Score = 30.4 bits (60), Expect = 8.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 / +3 Query: 287 RAEARTSRQENKRKVMEKLEKIREEA 364 RAE R+E +R+ K EK+REEA Sbjct: 396 RAEEERRRREEERRRRRKEEKVREEA 473
>LOC_Os10g16880:12010.t01250:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4865 Score = 30.4 bits (60), Expect = 8.9 Identities = 17/61 (27%), Positives = 24/61 (39%) Frame = +2 / +2 Query: 74 TTMAVTSLQLPSPIHWLTPARNGCTRTRPRATLVSCKHNQSTIVQEASRTSRRGTVAYIS 253 + + S PSP + AR C TRPR L N++ + R T A S Sbjct: 2429 SVQSALSASAPSPTWATSSARRACPWTRPRCRLSWTGRNRARPAPSGASWGSRATTASSS 2608 Query: 254 S 256 + Sbjct: 2609 T 2611
>LOC_Os09g28320:12009.t02510:unspliced-genomic hypothetical protein| Length = 1102 Score = 30.4 bits (60), Expect = 8.9 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +3 / -2 Query: 87 SLLCSCPLRSTGLLLLEMAAPAQGRALLLLAVNITSQPLSKKQAGHLVEVPW 242 SLL SCP RS L + M+ P A L S P+ G + + W Sbjct: 942 SLLLSCPCRSASHLGISMSLPGTLAAHQLCGATKCSVPVKIGHCGRIGDGGW 787
>LOC_Os07g41694:12007.t03824:unspliced-genomic acidic leucine-rich nuclear phosphoprotein 32 family member B,| putative, expressed Length = 8208 Score = 30.4 bits (60), Expect = 8.9 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +2 / -3 Query: 53 LLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPRATLVSCKHNQSTIVQEAS 217 LLG +G MA+T+ SP+ R G PR C H++ T ++ S Sbjct: 4171 LLGPKIGKEMALTAASTGSPVARPLAHRGGWFVGWPRTPPHRCNHSRFTYLKARS 4007
>LOC_Os07g35570:12007.t03232:unspliced-genomic wax synthase isoform 1, putative, expressed| Length = 1011 Score = 30.4 bits (60), Expect = 8.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 / -3 Query: 107 SPIHWLTPARNGCTRTRPRA 166 SP W +P R C+RT PRA Sbjct: 733 SPRPWCSPGRG*CSRTAPRA 674
>LOC_Os03g07120:12003.t00578:unspliced-genomic expressed protein| Length = 4833 Score = 30.4 bits (60), Expect = 8.9 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 / -2 Query: 298 KNLQTREQEESNGEAGEDPGGGTRLKGEEREH 393 ++ +TR + + GEAGED GG R + +H Sbjct: 1313 RSRRTRSRTDMAGEAGEDGHGGERAGEDGEQH 1218
>LOC_Os01g56910:12001.t05101:unspliced-genomic expressed protein| Length = 8924 Score = 30.4 bits (60), Expect = 8.9 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -2 / +2 Query: 325 PLVLLSGGSCFSTFSHHEHCKQSRRNVCHGTSTRCPAC 212 P +S SC S ++ C R +CH S RC C Sbjct: 728 PCCAMSPRSCVSRWAMSGSCLCLRSMICHCFSRRCSIC 841 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 197,187,448 Number of extensions: 3073351 Number of successful extensions: 15229 Number of sequences better than 10.0: 42 Length of query: 167 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 119 Effective length of database: 52,912,542 Effective search space: 6296592498 Effective search space used: 6296592498 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
