ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68h23 |
|---|---|
| Clone Library Name | barley_pub |
>Q7Z460:CLAP1_HUMAN CLIP-associating protein 1 - Homo sapiens (Human)| Length = 1538 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +2 Query: 2 GALALAFYGTTTGTQRKLLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPRATLVSC 181 GAL F T KLL +HL + + TS+ PS TP+R+ +RT P + +C Sbjct: 1063 GALPKTFQDGAT----KLLHNHLKNS-SNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNC 1117 Query: 182 KH 187 H Sbjct: 1118 SH 1119
>Q6N7S7:XGPT_RHOPA Xanthine phosphoribosyltransferase - Rhodopseudomonas palustris| Length = 173 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 192 SQPLSKKQAGHLVEVPWHTFRLLCLQCSWWLNVL 293 S+P +K+AG V W F C SW LN L Sbjct: 4 SEPTEQKRAGRPFPVSWDQFHRDCRALSWRLNEL 37
>Q03495:POLN_HEVME Non-structural polyprotein - Hepatitis E virus (strain Mexico) (HEV)| Length = 1691 Score = 29.6 bits (65), Expect = 5.9 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = +3 Query: 3 GHLHLPSTA-LPPVPNASFSVLI*EQQWPSLLCSCPLRSTGLLLLEMAAPAQGRALLLLA 179 GH P A LPP P +L Q+ S T ++ MAAP+Q +A+L Sbjct: 1248 GHRPAPVAAVLPPCPELEQGLLYLPQELASCDSVVTFELTDIVHCRMAAPSQRKAVLSTL 1307 Query: 180 VNITSQPLSKKQAGH 224 V + AGH Sbjct: 1308 VGRYGRRTRLYDAGH 1322
>Q61923:KCNA6_MOUSE Potassium voltage-gated channel subfamily A member 6 - Mus musculus| (Mouse) Length = 529 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 304 LQTREQEESNGEAGEDPGGGTRLKGEEREHE 396 L+T Q ++G G + G GTRL R HE Sbjct: 193 LETLPQFRADGRGGSNEGSGTRLSPASRSHE 223
>P22682:CBL_MOUSE E3 ubiquitin-protein ligase CBL - Mus musculus (Mouse)| Length = 913 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 289 YIFRLSCTRLGQWAIGYV 306
>P23092:CBL_MLVCN Transforming protein cbl - Cas-NS-1 murine leukemia virus| Length = 390 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 321 YIFRLSCTRLGQWAIGYV 338
>P22681:CBL_HUMAN E3 ubiquitin-protein ligase CBL - Homo sapiens (Human)| Length = 906 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 291 YIFRLSCTRLGQWAIGYV 308
>Q6DFR2:CBLB_XENTR E3 ubiquitin-protein ligase CBL-B - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 982 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 294 YIFRLSCTRLGQWAIGYV 311
>Q8K4S7:CBLB_RAT E3 ubiquitin-protein ligase CBL-B - Rattus norvegicus (Rat)| Length = 938 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 283 YIFRLSCTRLGQWAIGYV 300
>Q3TTA7:CBLB_MOUSE E3 ubiquitin-protein ligase CBL-B - Mus musculus (Mouse)| Length = 982 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 283 YIFRLSCTRLGQWAIGYV 300
>Q13191:CBLB_HUMAN E3 ubiquitin-protein ligase CBL-B - Homo sapiens (Human)| Length = 982 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 283 YIFRLSCTRLGQWAIGYV 300
>Q6NRE7:CBLBB_XENLA E3 ubiquitin-protein ligase CBL-B-B - Xenopus laevis (African| clawed frog) Length = 764 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 296 YIFRLSCTRLGQWAIGYV 313
>Q6GQL0:CBLBA_XENLA E3 ubiquitin-protein ligase CBL-B-A - Xenopus laevis (African| clawed frog) Length = 918 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 236 YLYEMSCLLLGQWLTGYV 183 Y++ +SC LGQW GYV Sbjct: 294 YIFRLSCTRLGQWAIGYV 311
>Q84YK8:LOXC2_ORYSJ Probable lipoxygenase 8, chloroplast precursor - Oryza sativa| subsp. japonica (Rice) Length = 941 Score = 29.3 bits (64), Expect = 7.7 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 29 TTTGTQRKLLGSHLGTTMAVTSLQLPSPIHWLTPARNGCTRTRPR-----ATLVSCKHNQ 193 TTT + + ++ + SL+ PSP + A GC TR R +V C Sbjct: 15 TTTTSSSSSTQLYFASSSCIASLRRPSPPSLIAGA--GCRTTRRRQQGRQRVVVRCA--S 70 Query: 194 STIVQEASRTSRRGT 238 S+ AS +RRGT Sbjct: 71 SSAASSASEAARRGT 85
>P25802:CYSP1_OSTOS Cathepsin B-like cysteine proteinase 1 precursor - Ostertagia| ostertagi Length = 341 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 331 NGEAGEDPGGGTRLKGEEREHE*GVCGELANPSYFGRCL 447 + + G GG KG R +E CG N +Y+G C+ Sbjct: 172 HADEGVVTGGDYNTKGSCRPYEIHPCGHHGNETYYGECV 210 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 78,383,653 Number of extensions: 1571054 Number of successful extensions: 5653 Number of sequences better than 10.0: 15 Number of HSP's gapped: 5650 Number of HSP's successfully gapped: 15 Length of query: 167 Length of database: 100,686,439 Length adjustment: 105 Effective length of query: 62 Effective length of database: 71,885,464 Effective search space: 4456898768 Effective search space used: 4456898768 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
